Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:50:44 (2796117): wrapper (7.7.26015): starting
09:50:44 (2796117): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 09:50:44] Arguments: --nthreads 4
[2024-05-16 09:50:44] Threads: 4
[2024-05-16 09:50:44] Checking for CVMFS
[2024-05-16 09:50:44] No cvmfs_config command found, will try listing directly
[2024-05-16 09:50:44] CVMFS is ok
[2024-05-16 09:50:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 09:50:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 09:50:44] Further information can be found at the LHC@home message board.
[2024-05-16 09:50:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 09:50:44] Checking for apptainer binary...
[2024-05-16 09:50:44] which: no apptainer in ((null))
[2024-05-16 09:50:44] apptainer is not installed, using version from CVMFS
[2024-05-16 09:50:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 09:50:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-16 09:50:45] apptainer works
[2024-05-16 09:50:45] Set ATHENA_PROC_NUMBER=4
[2024-05-16 09:50:45] Set ATHENA_CORE_NUMBER=4
[2024-05-16 09:50:45] Starting ATLAS job with PandaID=6205838637
[2024-05-16 09:50:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 13:50:27]  *** The last 200 lines of the pilot log: ***
[2024-05-16 13:50:27] 2024-05-16 11:50:10,630 | INFO     | -- intersect: -2371670294.8455544
[2024-05-16 13:50:27] 2024-05-16 11:50:10,630 | INFO     | intersect: -2371670294.8455544
[2024-05-16 13:50:27] 2024-05-16 11:50:10,630 | INFO     | chi2: 0.0582175815573123
[2024-05-16 13:50:27] 2024-05-16 11:50:10,630 | INFO     | current chi2=0.0582175815573123 (change=95.92470245698375 %)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,630 | INFO     | model: linear, x: [1715846795.0, 1715846856.0, 1715846917.0, 1715846978.0, 1715847039.0, 1715847100.0, 1715847161.0, 1715847222.0, 1715847283.0, 1715847344.0, 1715
[2024-05-16 13:50:27] 2024-05-16 11:50:10,630 | INFO     | sum of square deviations: 3301699115.0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,631 | INFO     | sum of deviations: 319884305.00000006
[2024-05-16 13:50:27] 2024-05-16 11:50:10,631 | INFO     | mean x: 1715853474.5
[2024-05-16 13:50:27] 2024-05-16 11:50:10,631 | INFO     | mean y: 2342075.6272727274
[2024-05-16 13:50:27] 2024-05-16 11:50:10,632 | INFO     | -- intersect: -163897965.35001293
[2024-05-16 13:50:27] 2024-05-16 11:50:10,632 | INFO     | intersect: -163897965.35001293
[2024-05-16 13:50:27] 2024-05-16 11:50:10,632 | INFO     | chi2: 0.004742581981222375
[2024-05-16 13:50:27] 2024-05-16 11:50:10,632 | INFO     | current chi2=0.004742581981222375 (change=91.85369461533962 %)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,632 | INFO     | model: linear, x: [1715847100.0, 1715847161.0, 1715847222.0, 1715847283.0, 1715847344.0, 1715847405.0, 1715847466.0, 1715847527.0, 1715847588.0, 1715847649.0, 1715
[2024-05-16 13:50:27] 2024-05-16 11:50:10,632 | INFO     | sum of square deviations: 3081657780.0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,633 | INFO     | sum of deviations: 1681839540.0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,633 | INFO     | mean x: 1715853627.0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,633 | INFO     | mean y: 2341129.1395348837
[2024-05-16 13:50:27] 2024-05-16 11:50:10,633 | INFO     | -- intersect: -934099799.9830401
[2024-05-16 13:50:27] 2024-05-16 11:50:10,633 | INFO     | intersect: -934099799.9830401
[2024-05-16 13:50:27] 2024-05-16 11:50:10,633 | INFO     | chi2: 0.0029792875409593786
[2024-05-16 13:50:27] 2024-05-16 11:50:10,633 | INFO     | current chi2=0.0029792875409593786 (change=37.180051862983646 %)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,634 | INFO     | model: linear, x: [1715847405.0, 1715847466.0, 1715847527.0, 1715847588.0, 1715847649.0, 1715847710.0, 1715847771.0, 1715847832.0, 1715847893.0, 1715847954.0, 1715
[2024-05-16 13:50:27] 2024-05-16 11:50:10,634 | INFO     | sum of square deviations: 2871616632.5
[2024-05-16 13:50:27] 2024-05-16 11:50:10,634 | INFO     | sum of deviations: 2448488607.5
[2024-05-16 13:50:27] 2024-05-16 11:50:10,635 | INFO     | mean x: 1715853779.5
[2024-05-16 13:50:27] 2024-05-16 11:50:10,635 | INFO     | mean y: 2340584.2714285715
[2024-05-16 13:50:27] 2024-05-16 11:50:10,635 | INFO     | -- intersect: -1460684940.686617
[2024-05-16 13:50:27] 2024-05-16 11:50:10,635 | INFO     | intersect: -1460684940.686617
[2024-05-16 13:50:27] 2024-05-16 11:50:10,635 | INFO     | chi2: 0.000381955055262375
[2024-05-16 13:50:27] 2024-05-16 11:50:10,635 | INFO     | current chi2=0.000381955055262375 (change=87.17965117461004 %)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,635 | INFO     | model: linear, x: [1715847710.0, 1715847771.0, 1715847832.0, 1715847893.0, 1715847954.0, 1715848015.0, 1715848076.0, 1715848137.0, 1715848198.0, 1715848259.0, 1715
[2024-05-16 13:50:27] 2024-05-16 11:50:10,635 | INFO     | sum of square deviations: 2671343110.0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,636 | INFO     | sum of deviations: 1906750504.9999998
[2024-05-16 13:50:27] 2024-05-16 11:50:10,636 | INFO     | mean x: 1715853932.0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,636 | INFO     | mean y: 2340993.9170731707
[2024-05-16 13:50:27] 2024-05-16 11:50:10,636 | INFO     | -- intersect: -1222400724.6213722
[2024-05-16 13:50:27] 2024-05-16 11:50:10,636 | INFO     | intersect: -1222400724.6213722
[2024-05-16 13:50:27] 2024-05-16 11:50:10,637 | INFO     | chi2: 0.00015706218171853122
[2024-05-16 13:50:27] 2024-05-16 11:50:10,637 | INFO     | current chi2=0.00015706218171853122 (change=58.87940752331683 %)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,637 | INFO     | model: linear, x: [1715848015.0, 1715848076.0, 1715848137.0, 1715848198.0, 1715848259.0, 1715848320.0, 1715848381.0, 1715848442.0, 1715848503.0, 1715848564.0, 1715
[2024-05-16 13:50:27] 2024-05-16 11:50:10,637 | INFO     | sum of square deviations: 2480604650.0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | sum of deviations: 1647745206.5
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | mean x: 1715854084.5
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | mean y: 2341200.905
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | -- intersect: -1137417342.5567005
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | intersect: -1137417342.5567005
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | chi2: 0.0001413422080583302
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | current chi2=0.0001413422080583302 (change=10.008757988840722 %)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | left removable region: 70
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | model: linear, x: [1715850150.0, 1715850211.0, 1715850272.0, 1715850333.0, 1715850394.0, 1715850455.0, 1715850516.0, 1715850577.0, 1715850638.0, 1715850699.0, 1715
[2024-05-16 13:50:27] 2024-05-16 11:50:10,638 | INFO     | sum of square deviations: 1246386160.0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,639 | INFO     | sum of deviations: 313847989.0000001
[2024-05-16 13:50:27] 2024-05-16 11:50:10,639 | INFO     | mean x: 1715854969.0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,639 | INFO     | mean y: 2342310.867924528
[2024-05-16 13:50:27] 2024-05-16 11:50:10,639 | INFO     | -- intersect: -429720920.1906645
[2024-05-16 13:50:27] 2024-05-16 11:50:10,639 | INFO     | intersect: -429720920.1906645
[2024-05-16 13:50:27] 2024-05-16 11:50:10,639 | INFO     | chi2: 2.1636816517950703e-05
[2024-05-16 13:50:27] 2024-05-16 11:50:10,639 | INFO     | -- intersect: -429720920.1906645
[2024-05-16 13:50:27] 2024-05-16 11:50:10,639 | INFO     | current memory leak: 0.25 B/s (using 159 data points, chi2=0.00)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | ..............................
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | . Timing measurements:
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | . get job = 0 s
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | . initial setup = 1 s
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | . payload setup = 5 s
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | . stage-in = 0 s
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | . payload execution = 14320 s
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | . stage-out = 1 s
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | . log creation = 0 s
[2024-05-16 13:50:27] 2024-05-16 11:50:10,640 | INFO     | ..............................
[2024-05-16 13:50:27] 2024-05-16 11:50:10,700 | INFO     | 
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | job summary report
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | --------------------------------------------------
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | PanDA job id: 6205838637
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | task id: 38776125
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | errors: (none)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | pilot state: finished 
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | transexitcode: 0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | exeerrorcode: 0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | exeerrordiag: 
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | exitcode: 0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | exitmsg: OK
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | cpuconsumptiontime: 54368 s
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | nevents: 400
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | neventsw: 0
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | pid: 2807535
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | pgrp: 2807535
[2024-05-16 13:50:27] 2024-05-16 11:50:10,701 | INFO     | corecount: 4
[2024-05-16 13:50:27] 2024-05-16 11:50:10,702 | INFO     | event service: False
[2024-05-16 13:50:27] 2024-05-16 11:50:10,702 | INFO     | sizes: {0: 2392205, 4: 2392411, 11: 2392439, 14330: 2423143, 14332: 2432181, 14341: 2432295}
[2024-05-16 13:50:27] 2024-05-16 11:50:10,702 | INFO     | --------------------------------------------------
[2024-05-16 13:50:27] 2024-05-16 11:50:10,702 | INFO     | 
[2024-05-16 13:50:27] 2024-05-16 11:50:10,702 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-16 13:50:27] 2024-05-16 11:50:10,720 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,720 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,720 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,720 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | job 6205838637 has completed (purged errors)
[2024-05-16 13:50:27] 2024-05-16 11:50:10,721 | INFO     | overall cleanup function is called
[2024-05-16 13:50:27] 2024-05-16 11:50:11,727 | INFO     | --- collectZombieJob: --- 10, [2807535]
[2024-05-16 13:50:27] 2024-05-16 11:50:11,728 | INFO     | zombie collector waiting for pid 2807535
[2024-05-16 13:50:27] 2024-05-16 11:50:11,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 13:50:27] 2024-05-16 11:50:12,732 | INFO     | collected zombie processes
[2024-05-16 13:50:27] 2024-05-16 11:50:12,733 | INFO     | will now attempt to kill all subprocesses of pid=2807535
[2024-05-16 13:50:27] 2024-05-16 11:50:12,909 | INFO     | process IDs to be killed: [2807535] (in reverse order)
[2024-05-16 13:50:27] 2024-05-16 11:50:13,061 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 13:50:27] 2024-05-16 11:50:13,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 13:50:27] 2024-05-16 11:50:13,070 | INFO     | did not find any defunct processes belonging to 2807535
[2024-05-16 13:50:27] 2024-05-16 11:50:13,079 | INFO     | did not find any defunct processes belonging to 2807535
[2024-05-16 13:50:27] 2024-05-16 11:50:13,079 | INFO     | ready for new job
[2024-05-16 13:50:27] 2024-05-16 11:50:13,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 13:50:27] 2024-05-16 11:50:13,081 | INFO     | *************************************
[2024-05-16 13:50:27] 2024-05-16 11:50:13,081 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 13:50:27] 2024-05-16 11:50:13,081 | INFO     | *************************************
[2024-05-16 13:50:27] 2024-05-16 11:50:13,081 | INFO     | 
[2024-05-16 13:50:27] 2024-05-16 11:50:13,085 | INFO     | architecture information:
[2024-05-16 13:50:27] 2024-05-16 11:50:13,085 | INFO     | executing command: cat /etc/os-release
[2024-05-16 13:50:27] 2024-05-16 11:50:13,104 | INFO     | cat /etc/os-release:
[2024-05-16 13:50:27] NAME="CentOS Linux"
[2024-05-16 13:50:27] VERSION="7 (Core)"
[2024-05-16 13:50:27] ID="centos"
[2024-05-16 13:50:27] ID_LIKE="rhel fedora"
[2024-05-16 13:50:27] VERSION_ID="7"
[2024-05-16 13:50:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 13:50:27] ANSI_COLOR="0;31"
[2024-05-16 13:50:27] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 13:50:27] HOME_URL="https://www.centos.org/"
[2024-05-16 13:50:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 13:50:27] 
[2024-05-16 13:50:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 13:50:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 13:50:27] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 13:50:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 13:50:27] 
[2024-05-16 13:50:27] 2024-05-16 11:50:13,104 | INFO     | *************************************
[2024-05-16 13:50:27] 2024-05-16 11:50:13,607 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-16 13:50:27] 2024-05-16 11:50:13,744 | INFO     | sufficient remaining disk space (553406955520 B)
[2024-05-16 13:50:27] 2024-05-16 11:50:13,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 13:50:27] 2024-05-16 11:50:13,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 13:50:27] 2024-05-16 11:50:14,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 13:50:27] 2024-05-16 11:50:14,067 | INFO     | aborting loop
[2024-05-16 13:50:27] 2024-05-16 11:50:14,184 | INFO     | all payload control threads have been joined
[2024-05-16 13:50:27] 2024-05-16 11:50:14,468 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 13:50:27] 2024-05-16 11:50:14,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 13:50:27] 2024-05-16 11:50:14,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 13:50:27] 2024-05-16 11:50:14,646 | INFO     | all job control threads have been joined
[2024-05-16 13:50:27] 2024-05-16 11:50:14,750 | INFO     | [job] retrieve thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:14,753 | INFO     | all data control threads have been joined
[2024-05-16 13:50:27] 2024-05-16 11:50:14,872 | INFO     | [payload] failed_post thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 13:50:27] 2024-05-16 11:50:15,072 | INFO     | [job] job monitor thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,167 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,186 | INFO     | [payload] control thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,197 | INFO     | [data] copytool_in thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,278 | INFO     | [job] validate thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,306 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,403 | INFO     | [payload] validate_post thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,651 | INFO     | [job] control thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 13:50:27] 2024-05-16 11:50:15,758 | INFO     | [data] control thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:15,956 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:16,218 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:16,716 | INFO     | [job] queue monitor thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:17,043 | INFO     | [data] copytool_out thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:17,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 13:50:27] 2024-05-16 11:50:21,120 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 13:50:27] 2024-05-16 11:50:21,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47347905827904)>', '<ExcThread(monitor, started 47348074977024)>']
[2024-05-16 13:50:27] 2024-05-16 11:50:22,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 13:50:27] 2024-05-16 11:50:22,507 | INFO     | [monitor] control thread has ended
[2024-05-16 13:50:27] 2024-05-16 11:50:26,731 | INFO     | all workflow threads have been joined
[2024-05-16 13:50:27] 2024-05-16 11:50:26,731 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 13:50:27] 2024-05-16 11:50:26,731 | INFO     | traces error code: 0
[2024-05-16 13:50:27] 2024-05-16 11:50:26,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 13:50:27] 2024-05-16 11:50:26,854 [wrapper] ==== pilot stdout END ====
[2024-05-16 13:50:27] 2024-05-16 11:50:26,857 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 13:50:27] 2024-05-16 11:50:26,860 [wrapper] pilotpid: 2800440
[2024-05-16 13:50:27] 2024-05-16 11:50:26,862 [wrapper] Pilot exit status: 0
[2024-05-16 13:50:27] 2024-05-16 11:50:26,879 [wrapper] pandaids: 6205838637
[2024-05-16 13:50:27] 2024-05-16 11:50:26,959 [wrapper] cleanup: SIGTERM to supervisor_pilot 3305413 2800441
[2024-05-16 13:50:27] 2024-05-16 11:50:26,962 [wrapper] Test setup, not cleaning
[2024-05-16 13:50:27] 2024-05-16 11:50:26,964 [wrapper] ==== wrapper stdout END ====
[2024-05-16 13:50:27] 2024-05-16 11:50:26,966 [wrapper] ==== wrapper stderr END ====
[2024-05-16 13:50:27] 2024-05-16 11:50:26,970 [wrapper] apfmon messages muted
[2024-05-16 13:50:27]  *** Error codes and diagnostics ***
[2024-05-16 13:50:27]     "exeErrorCode": 0,
[2024-05-16 13:50:27]     "exeErrorDiag": "",
[2024-05-16 13:50:27]     "pilotErrorCode": 0,
[2024-05-16 13:50:27]     "pilotErrorDiag": "",
[2024-05-16 13:50:27]  *** Listing of results directory ***
[2024-05-16 13:50:27] total 832160
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc    467845 May 13 15:49 pilot3.tar.gz
[2024-05-16 13:50:27] -rwx------ 1 boinc boinc     32251 May 13 16:13 runpilot2-wrapper.sh
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc      5633 May 13 16:13 queuedata.json
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc       100 May 16 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 13:50:27] -rwxr-xr-x 1 boinc boinc      7986 May 16 09:50 run_atlas
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc       105 May 16 09:50 job.xml
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc      6663 May 16 09:50 init_data.xml
[2024-05-16 13:50:27] -rw-r--r-- 2 boinc boinc 600308472 May 16 09:50 EVNT.38776119._000270.pool.root.1
[2024-05-16 13:50:27] drwxrwx--x 2 boinc boinc      4096 May 16 09:50 shared
[2024-05-16 13:50:27] -rw-r--r-- 2 boinc boinc    480004 May 16 09:50 input.tar.gz
[2024-05-16 13:50:27] -rw-r--r-- 2 boinc boinc     17537 May 16 09:50 start_atlas.sh
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc         0 May 16 09:50 boinc_lockfile
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc      2633 May 16 09:50 pandaJob.out
[2024-05-16 13:50:27] -rw------- 1 boinc boinc       424 May 16 09:50 setup.sh.local
[2024-05-16 13:50:27] -rw------- 1 boinc boinc   1010273 May 16 09:50 agis_schedconf.cvmfs.json
[2024-05-16 13:50:27] -rw------- 1 boinc boinc   1324701 May 16 09:50 cric_ddmendpoints.json
[2024-05-16 13:50:27] drwx------ 4 boinc boinc      4096 May 16 09:50 pilot3
[2024-05-16 13:50:27] -rw------- 1 boinc boinc 244464625 May 16 13:49 HITS.38776125._006512.pool.root.1
[2024-05-16 13:50:27] -rw------- 1 boinc boinc        95 May 16 13:49 pilot_heartbeat.json
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc       531 May 16 13:49 boinc_task_state.xml
[2024-05-16 13:50:27] -rw------- 1 boinc boinc      1050 May 16 13:49 memory_monitor_summary.json
[2024-05-16 13:50:27] -rw------- 1 boinc boinc         0 May 16 13:50 agis_ddmendpoints.agis.ALL.json
[2024-05-16 13:50:27] -rw------- 1 boinc boinc    344864 May 16 13:50 log.38776125._006512.job.log.tgz.1
[2024-05-16 13:50:27] -rw------- 1 boinc boinc      7762 May 16 13:50 heartbeat.json
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc      8192 May 16 13:50 boinc_mmap_file
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc        28 May 16 13:50 wrapper_checkpoint.txt
[2024-05-16 13:50:27] -rw------- 1 boinc boinc      4221 May 16 13:50 pilotlog.txt
[2024-05-16 13:50:27] -rw------- 1 boinc boinc   1570835 May 16 13:50 log.38776125._006512.job.log.1
[2024-05-16 13:50:27] -rw------- 1 boinc boinc       357 May 16 13:50 output.list
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc       620 May 16 13:50 runtime_log
[2024-05-16 13:50:27] -rw------- 1 boinc boinc   1935360 May 16 13:50 result.tar.gz
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc     11410 May 16 13:50 runtime_log.err
[2024-05-16 13:50:27] -rw------- 1 boinc boinc       658 May 16 13:50 oK5MDmqblQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDm5sKKDmrd1U0m.diag
[2024-05-16 13:50:27] -rw-r--r-- 1 boinc boinc     21332 May 16 13:50 stderr.txt
[2024-05-16 13:50:27] HITS file was successfully produced:
[2024-05-16 13:50:27] -rw------- 1 boinc boinc 244464625 May 16 13:49 shared/HITS.pool.root.1
[2024-05-16 13:50:27]  *** Contents of shared directory: ***
[2024-05-16 13:50:27] total 827368
[2024-05-16 13:50:27] -rw-r--r-- 2 boinc boinc 600308472 May 16 09:50 ATLAS.root_0
[2024-05-16 13:50:27] -rw-r--r-- 2 boinc boinc    480004 May 16 09:50 input.tar.gz
[2024-05-16 13:50:27] -rw-r--r-- 2 boinc boinc     17537 May 16 09:50 start_atlas.sh
[2024-05-16 13:50:27] -rw------- 1 boinc boinc 244464625 May 16 13:49 HITS.pool.root.1
[2024-05-16 13:50:27] -rw------- 1 boinc boinc   1935360 May 16 13:50 result.tar.gz
13:50:29 (2796117): run_atlas exited; CPU time 54063.990704
13:50:29 (2796117): called boinc_finish(0)

</stderr_txt>
]]>

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