Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:00:41 (386773): wrapper (7.7.26015): starting
20:00:41 (386773): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 20:00:41] Arguments: --nthreads 4
[2024-05-16 20:00:41] Threads: 4
[2024-05-16 20:00:41] Checking for CVMFS
[2024-05-16 20:00:41] No cvmfs_config command found, will try listing directly
[2024-05-16 20:00:41] CVMFS is ok
[2024-05-16 20:00:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 20:00:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 20:00:41] Further information can be found at the LHC@home message board.
[2024-05-16 20:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 20:00:41] Checking for apptainer binary...
[2024-05-16 20:00:41] which: no apptainer in ((null))
[2024-05-16 20:00:41] apptainer is not installed, using version from CVMFS
[2024-05-16 20:00:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 20:00:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-05-16 20:00:42] apptainer works
[2024-05-16 20:00:42] Set ATHENA_PROC_NUMBER=4
[2024-05-16 20:00:42] Set ATHENA_CORE_NUMBER=4
[2024-05-16 20:00:42] Starting ATLAS job with PandaID=6205838101
[2024-05-16 20:00:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 00:00:11]  *** The last 200 lines of the pilot log: ***
[2024-05-17 00:00:11] 2024-05-16 21:59:49,163 | INFO     | fitting pss+swap vs Time
[2024-05-17 00:00:11] 2024-05-16 21:59:49,163 | INFO     | model: linear, x: [1715882494.0, 1715882555.0, 1715882616.0, 1715882677.0, 1715882738.0, 1715882799.0, 1715882860.0, 1715882921.0, 1715882982.0, 1715883043.0, 1715
[2024-05-17 00:00:11] 2024-05-16 21:59:49,163 | INFO     | sum of square deviations: 4024149870.0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,164 | INFO     | sum of deviations: 95339578753.99998
[2024-05-17 00:00:11] 2024-05-16 21:59:49,164 | INFO     | mean x: 1715889631.0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,164 | INFO     | mean y: 2273694.8638297874
[2024-05-17 00:00:11] 2024-05-16 21:59:49,164 | INFO     | -- intersect: -40650336146.40346
[2024-05-17 00:00:11] 2024-05-16 21:59:49,164 | INFO     | intersect: -40650336146.40346
[2024-05-17 00:00:11] 2024-05-16 21:59:49,165 | INFO     | chi2: 4.800629071777682
[2024-05-17 00:00:11] 2024-05-16 21:59:49,165 | INFO     | model: linear, x: [1715882494.0, 1715882555.0, 1715882616.0, 1715882677.0, 1715882738.0, 1715882799.0, 1715882860.0, 1715882921.0, 1715882982.0, 1715883043.0, 1715
[2024-05-17 00:00:11] 2024-05-16 21:59:49,165 | INFO     | sum of square deviations: 3772712597.5
[2024-05-17 00:00:11] 2024-05-16 21:59:49,166 | INFO     | sum of deviations: 107328462694.99998
[2024-05-17 00:00:11] 2024-05-16 21:59:49,166 | INFO     | mean x: 1715889478.5
[2024-05-17 00:00:11] 2024-05-16 21:59:49,166 | INFO     | mean y: 2280814.6173913046
[2024-05-17 00:00:11] 2024-05-16 21:59:49,167 | INFO     | -- intersect: -48812404938.00711
[2024-05-17 00:00:11] 2024-05-16 21:59:49,167 | INFO     | intersect: -48812404938.00711
[2024-05-17 00:00:11] 2024-05-16 21:59:49,167 | INFO     | chi2: 4.057546573900143
[2024-05-17 00:00:11] 2024-05-16 21:59:49,167 | INFO     | current chi2=4.057546573900143 (change=15.478856765794124 %)
[2024-05-17 00:00:11] 2024-05-16 21:59:49,167 | INFO     | right removable region: 229
[2024-05-17 00:00:11] 2024-05-16 21:59:49,167 | INFO     | model: linear, x: [1715882799.0, 1715882860.0, 1715882921.0, 1715882982.0, 1715883043.0, 1715883104.0, 1715883165.0, 1715883226.0, 1715883287.0, 1715883348.0, 1715
[2024-05-17 00:00:11] 2024-05-16 21:59:49,167 | INFO     | sum of square deviations: 3772712597.5
[2024-05-17 00:00:11] 2024-05-16 21:59:49,168 | INFO     | sum of deviations: 41719428172.00001
[2024-05-17 00:00:11] 2024-05-16 21:59:49,169 | INFO     | mean x: 1715889783.5
[2024-05-17 00:00:11] 2024-05-16 21:59:49,169 | INFO     | mean y: 2306128.269565217
[2024-05-17 00:00:11] 2024-05-16 21:59:49,169 | INFO     | -- intersect: -18972354337.84533
[2024-05-17 00:00:11] 2024-05-16 21:59:49,169 | INFO     | intersect: -18972354337.84533
[2024-05-17 00:00:11] 2024-05-16 21:59:49,169 | INFO     | chi2: 2.364851596626154
[2024-05-17 00:00:11] 2024-05-16 21:59:49,169 | INFO     | current chi2=2.364851596626154 (change=50.73871442122386 %)
[2024-05-17 00:00:11] 2024-05-16 21:59:49,170 | INFO     | model: linear, x: [1715883104.0, 1715883165.0, 1715883226.0, 1715883287.0, 1715883348.0, 1715883409.0, 1715883470.0, 1715883531.0, 1715883592.0, 1715883653.0, 1715
[2024-05-17 00:00:11] 2024-05-16 21:59:49,170 | INFO     | sum of square deviations: 3531973200.0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,171 | INFO     | sum of deviations: -1864463475.000002
[2024-05-17 00:00:11] 2024-05-16 21:59:49,171 | INFO     | mean x: 1715889936.0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,171 | INFO     | mean y: 2333755.248888889
[2024-05-17 00:00:11] 2024-05-16 21:59:49,171 | INFO     | -- intersect: 908120388.2822571
[2024-05-17 00:00:11] 2024-05-16 21:59:49,171 | INFO     | intersect: 908120388.2822571
[2024-05-17 00:00:11] 2024-05-16 21:59:49,172 | INFO     | chi2: 0.8957618500667051
[2024-05-17 00:00:11] 2024-05-16 21:59:49,172 | INFO     | current chi2=0.8957618500667051 (change=62.1218578220868 %)
[2024-05-17 00:00:11] 2024-05-16 21:59:49,172 | INFO     | model: linear, x: [1715883409.0, 1715883470.0, 1715883531.0, 1715883592.0, 1715883653.0, 1715883714.0, 1715883775.0, 1715883836.0, 1715883897.0, 1715883958.0, 1715
[2024-05-17 00:00:11] 2024-05-16 21:59:49,172 | INFO     | sum of square deviations: 3301699115.0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,173 | INFO     | sum of deviations: -11041923753.5
[2024-05-17 00:00:11] 2024-05-16 21:59:49,173 | INFO     | mean x: 1715890088.5
[2024-05-17 00:00:11] 2024-05-16 21:59:49,173 | INFO     | mean y: 2339766.595454545
[2024-05-17 00:00:11] 2024-05-16 21:59:49,173 | INFO     | -- intersect: 5740817703.766107
[2024-05-17 00:00:11] 2024-05-16 21:59:49,173 | INFO     | intersect: 5740817703.766107
[2024-05-17 00:00:11] 2024-05-16 21:59:49,173 | INFO     | chi2: 0.7770394418577571
[2024-05-17 00:00:11] 2024-05-16 21:59:49,173 | INFO     | current chi2=0.7770394418577571 (change=13.253791529535114 %)
[2024-05-17 00:00:11] 2024-05-16 21:59:49,173 | INFO     | left removable region: 30
[2024-05-17 00:00:11] 2024-05-16 21:59:49,173 | INFO     | model: linear, x: [1715884324.0, 1715884385.0, 1715884446.0, 1715884507.0, 1715884568.0, 1715884629.0, 1715884690.0, 1715884751.0, 1715884812.0, 1715884873.0, 1715
[2024-05-17 00:00:11] 2024-05-16 21:59:49,174 | INFO     | sum of square deviations: 2443580700.0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,174 | INFO     | sum of deviations: 2382225985.0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,174 | INFO     | mean x: 1715890363.0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,174 | INFO     | mean y: 2348803.8592964825
[2024-05-17 00:00:11] 2024-05-16 21:59:49,174 | INFO     | -- intersect: -1670458077.5134702
[2024-05-17 00:00:11] 2024-05-16 21:59:49,174 | INFO     | intersect: -1670458077.5134702
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | chi2: 0.0009211758362278417
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | -- intersect: -1670458077.5134702
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | current memory leak: 0.97 B/s (using 199 data points, chi2=0.00)
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | ..............................
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | . Timing measurements:
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | . get job = 0 s
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | . initial setup = 1 s
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | . payload setup = 9 s
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | . stage-in = 0 s
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | . payload execution = 14293 s
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | . stage-out = 0 s
[2024-05-17 00:00:11] 2024-05-16 21:59:49,175 | INFO     | . log creation = 0 s
[2024-05-17 00:00:11] 2024-05-16 21:59:49,176 | INFO     | ..............................
[2024-05-17 00:00:11] 2024-05-16 21:59:49,238 | INFO     | 
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | job summary report
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | --------------------------------------------------
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | PanDA job id: 6205838101
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | task id: 38776125
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | errors: (none)
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | pilot state: finished 
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | transexitcode: 0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | exeerrorcode: 0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | exeerrordiag: 
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | exitcode: 0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | exitmsg: OK
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | cpuconsumptiontime: 54071 s
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | nevents: 400
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | neventsw: 0
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | pid: 398446
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | pgrp: 398446
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | corecount: 4
[2024-05-17 00:00:11] 2024-05-16 21:59:49,239 | INFO     | event service: False
[2024-05-17 00:00:11] 2024-05-16 21:59:49,240 | INFO     | sizes: {0: 2392205, 7: 2392411, 11: 2392439, 14305: 2422942, 14307: 2431924, 14309: 2431980, 14313: 2432278}
[2024-05-17 00:00:11] 2024-05-16 21:59:49,240 | INFO     | --------------------------------------------------
[2024-05-17 00:00:11] 2024-05-16 21:59:49,240 | INFO     | 
[2024-05-17 00:00:11] 2024-05-16 21:59:49,240 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-05-17 00:00:11] 2024-05-16 21:59:49,324 | WARNING  | process 398446 is no longer using CPU - aborting
[2024-05-17 00:00:11] 2024-05-16 21:59:49,324 | INFO     | aborting job monitoring since job object (job id=6205838101) has expired
[2024-05-17 00:00:11] 2024-05-16 21:59:49,342 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,343 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 00:00:11] 2024-05-16 21:59:49,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,344 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 00:00:11] 2024-05-16 21:59:49,344 | INFO     | job 6205838101 has completed (purged errors)
[2024-05-17 00:00:11] 2024-05-16 21:59:49,344 | INFO     | overall cleanup function is called
[2024-05-17 00:00:11] 2024-05-16 21:59:50,351 | INFO     | --- collectZombieJob: --- 10, [398446]
[2024-05-17 00:00:11] 2024-05-16 21:59:50,351 | INFO     | zombie collector waiting for pid 398446
[2024-05-17 00:00:11] 2024-05-16 21:59:50,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 00:00:11] 2024-05-16 21:59:51,356 | INFO     | collected zombie processes
[2024-05-17 00:00:11] 2024-05-16 21:59:51,356 | INFO     | will now attempt to kill all subprocesses of pid=398446
[2024-05-17 00:00:11] 2024-05-16 21:59:51,540 | INFO     | process IDs to be killed: [398446] (in reverse order)
[2024-05-17 00:00:11] 2024-05-16 21:59:51,646 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 00:00:11] 2024-05-16 21:59:51,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 00:00:11] 2024-05-16 21:59:51,655 | INFO     | did not find any defunct processes belonging to 398446
[2024-05-17 00:00:11] 2024-05-16 21:59:51,662 | INFO     | did not find any defunct processes belonging to 398446
[2024-05-17 00:00:11] 2024-05-16 21:59:51,662 | INFO     | ready for new job
[2024-05-17 00:00:11] 2024-05-16 21:59:51,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 00:00:11] 2024-05-16 21:59:51,664 | INFO     | *************************************
[2024-05-17 00:00:11] 2024-05-16 21:59:51,664 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 00:00:11] 2024-05-16 21:59:51,664 | INFO     | *************************************
[2024-05-17 00:00:11] 2024-05-16 21:59:51,664 | INFO     | 
[2024-05-17 00:00:11] 2024-05-16 21:59:51,667 | INFO     | architecture information:
[2024-05-17 00:00:11] 2024-05-16 21:59:51,667 | INFO     | executing command: cat /etc/os-release
[2024-05-17 00:00:11] 2024-05-16 21:59:51,679 | INFO     | cat /etc/os-release:
[2024-05-17 00:00:11] NAME="CentOS Linux"
[2024-05-17 00:00:11] VERSION="7 (Core)"
[2024-05-17 00:00:11] ID="centos"
[2024-05-17 00:00:11] ID_LIKE="rhel fedora"
[2024-05-17 00:00:11] VERSION_ID="7"
[2024-05-17 00:00:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 00:00:11] ANSI_COLOR="0;31"
[2024-05-17 00:00:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 00:00:11] HOME_URL="https://www.centos.org/"
[2024-05-17 00:00:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 00:00:11] 
[2024-05-17 00:00:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 00:00:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 00:00:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 00:00:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 00:00:11] 
[2024-05-17 00:00:11] 2024-05-16 21:59:51,680 | INFO     | *************************************
[2024-05-17 00:00:11] 2024-05-16 21:59:52,183 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-05-17 00:00:11] 2024-05-16 21:59:52,202 | INFO     | sufficient remaining disk space (567516594176 B)
[2024-05-17 00:00:11] 2024-05-16 21:59:52,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 00:00:11] 2024-05-16 21:59:52,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 00:00:11] 2024-05-16 21:59:52,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 00:00:11] 2024-05-16 21:59:52,455 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 00:00:11] 2024-05-16 21:59:52,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 00:00:11] 2024-05-16 21:59:52,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 00:00:11] 2024-05-16 21:59:52,467 | INFO     | all payload control threads have been joined
[2024-05-17 00:00:11] 2024-05-16 21:59:52,671 | INFO     | all job control threads have been joined
[2024-05-17 00:00:11] 2024-05-16 21:59:52,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 00:00:11] 2024-05-16 21:59:52,832 | INFO     | aborting loop
[2024-05-17 00:00:11] 2024-05-16 21:59:52,855 | INFO     | all data control threads have been joined
[2024-05-17 00:00:11] 2024-05-16 21:59:53,207 | INFO     | [job] retrieve thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:53,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 00:00:11] 2024-05-16 21:59:53,472 | INFO     | [payload] control thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:53,477 | INFO     | [payload] validate_post thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:53,676 | INFO     | [job] control thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:53,837 | INFO     | [job] job monitor thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:53,858 | INFO     | [data] control thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:54,225 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:54,239 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:54,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 00:00:11] 2024-05-16 21:59:54,262 | INFO     | [data] copytool_in thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:54,617 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:54,640 | INFO     | [payload] failed_post thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:54,650 | INFO     | [job] validate thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:55,250 | INFO     | [job] queue monitor thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:55,276 | INFO     | [data] copytool_out thread has finished
[2024-05-17 00:00:11] 2024-05-16 21:59:56,208 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 00:00:11] 2024-05-16 22:00:02,965 | INFO     | job.realtimelogging is not enabled
[2024-05-17 00:00:11] 2024-05-16 22:00:03,970 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 00:00:11] 2024-05-16 22:00:04,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47728577930304)>', '<ExcThread(monitor, started 47728759686912)>']
[2024-05-17 00:00:11] 2024-05-16 22:00:05,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 00:00:11] 2024-05-16 22:00:05,506 | INFO     | [monitor] control thread has ended
[2024-05-17 00:00:11] 2024-05-16 22:00:09,979 | INFO     | all workflow threads have been joined
[2024-05-17 00:00:11] 2024-05-16 22:00:09,979 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 00:00:11] 2024-05-16 22:00:09,979 | INFO     | traces error code: 0
[2024-05-17 00:00:11] 2024-05-16 22:00:09,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 00:00:11] 2024-05-16 22:00:10,060 [wrapper] ==== pilot stdout END ====
[2024-05-17 00:00:11] 2024-05-16 22:00:10,062 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 00:00:11] 2024-05-16 22:00:10,065 [wrapper] pilotpid: 391179
[2024-05-17 00:00:11] 2024-05-16 22:00:10,067 [wrapper] Pilot exit status: 0
[2024-05-17 00:00:11] 2024-05-16 22:00:10,075 [wrapper] pandaids: 6205838101
[2024-05-17 00:00:11] 2024-05-16 22:00:10,150 [wrapper] cleanup: SIGTERM to supervisor_pilot  909062 391180
[2024-05-17 00:00:11] 2024-05-16 22:00:10,153 [wrapper] Test setup, not cleaning
[2024-05-17 00:00:11] 2024-05-16 22:00:10,155 [wrapper] ==== wrapper stdout END ====
[2024-05-17 00:00:11] 2024-05-16 22:00:10,157 [wrapper] ==== wrapper stderr END ====
[2024-05-17 00:00:11] 2024-05-16 22:00:10,162 [wrapper] apfmon messages muted
[2024-05-17 00:00:11]  *** Error codes and diagnostics ***
[2024-05-17 00:00:11]     "exeErrorCode": 0,
[2024-05-17 00:00:11]     "exeErrorDiag": "",
[2024-05-17 00:00:11]     "pilotErrorCode": 0,
[2024-05-17 00:00:11]     "pilotErrorDiag": "",
[2024-05-17 00:00:11]  *** Listing of results directory ***
[2024-05-17 00:00:11] total 831224
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc    467845 May 13 15:49 pilot3.tar.gz
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc      5633 May 13 15:53 queuedata.json
[2024-05-17 00:00:11] -rwx------ 1 boinc boinc     32251 May 13 15:54 runpilot2-wrapper.sh
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc       100 May 16 20:00 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 00:00:11] -rwxr-xr-x 1 boinc boinc      7986 May 16 20:00 run_atlas
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc       105 May 16 20:00 job.xml
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc      6663 May 16 20:00 init_data.xml
[2024-05-17 00:00:11] -rw-r--r-- 2 boinc boinc 598340524 May 16 20:00 EVNT.38776119._000261.pool.root.1
[2024-05-17 00:00:11] -rw-r--r-- 2 boinc boinc     17537 May 16 20:00 start_atlas.sh
[2024-05-17 00:00:11] drwxrwx--x 2 boinc boinc      4096 May 16 20:00 shared
[2024-05-17 00:00:11] -rw-r--r-- 2 boinc boinc    480014 May 16 20:00 input.tar.gz
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc         0 May 16 20:00 boinc_lockfile
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc      2633 May 16 20:00 pandaJob.out
[2024-05-17 00:00:11] -rw------- 1 boinc boinc       424 May 16 20:00 setup.sh.local
[2024-05-17 00:00:11] -rw------- 1 boinc boinc   1018966 May 16 20:00 agis_schedconf.cvmfs.json
[2024-05-17 00:00:11] -rw------- 1 boinc boinc   1324701 May 16 20:00 cric_ddmendpoints.json
[2024-05-17 00:00:11] drwx------ 4 boinc boinc      4096 May 16 20:00 pilot3
[2024-05-17 00:00:11] -rw------- 1 boinc boinc 245655383 May 16 23:59 HITS.38776125._006278.pool.root.1
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc       532 May 16 23:59 boinc_task_state.xml
[2024-05-17 00:00:11] -rw------- 1 boinc boinc      1051 May 16 23:59 memory_monitor_summary.json
[2024-05-17 00:00:11] -rw------- 1 boinc boinc         0 May 16 23:59 agis_ddmendpoints.agis.ALL.json
[2024-05-17 00:00:11] -rw------- 1 boinc boinc        95 May 16 23:59 pilot_heartbeat.json
[2024-05-17 00:00:11] -rw------- 1 boinc boinc    335585 May 16 23:59 log.38776125._006278.job.log.tgz.1
[2024-05-17 00:00:11] -rw------- 1 boinc boinc      7765 May 16 23:59 heartbeat.json
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc      8192 May 17 00:00 boinc_mmap_file
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc        28 May 17 00:00 wrapper_checkpoint.txt
[2024-05-17 00:00:11] -rw------- 1 boinc boinc      4293 May 17 00:00 pilotlog.txt
[2024-05-17 00:00:11] -rw------- 1 boinc boinc   1485590 May 17 00:00 log.38776125._006278.job.log.1
[2024-05-17 00:00:11] -rw------- 1 boinc boinc       357 May 17 00:00 output.list
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc       620 May 17 00:00 runtime_log
[2024-05-17 00:00:11] -rw------- 1 boinc boinc   1843200 May 17 00:00 result.tar.gz
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc     11410 May 17 00:00 runtime_log.err
[2024-05-17 00:00:11] -rw------- 1 boinc boinc       659 May 17 00:00 OpzMDmYJlQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmTqKKDmg6G3km.diag
[2024-05-17 00:00:11] -rw-r--r-- 1 boinc boinc     21304 May 17 00:00 stderr.txt
[2024-05-17 00:00:11] HITS file was successfully produced:
[2024-05-17 00:00:11] -rw------- 1 boinc boinc 245655383 May 16 23:59 shared/HITS.pool.root.1
[2024-05-17 00:00:11]  *** Contents of shared directory: ***
[2024-05-17 00:00:11] total 826520
[2024-05-17 00:00:11] -rw-r--r-- 2 boinc boinc 598340524 May 16 20:00 ATLAS.root_0
[2024-05-17 00:00:11] -rw-r--r-- 2 boinc boinc     17537 May 16 20:00 start_atlas.sh
[2024-05-17 00:00:11] -rw-r--r-- 2 boinc boinc    480014 May 16 20:00 input.tar.gz
[2024-05-17 00:00:11] -rw------- 1 boinc boinc 245655383 May 16 23:59 HITS.pool.root.1
[2024-05-17 00:00:11] -rw------- 1 boinc boinc   1843200 May 17 00:00 result.tar.gz
00:00:12 (386773): run_atlas exited; CPU time 53736.311330
00:00:12 (386773): called boinc_finish(0)

</stderr_txt>
]]>

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