Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:42:11 (3108441): wrapper (7.7.26015): starting
01:42:11 (3108441): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 01:42:11] Arguments: --nthreads 4
[2024-05-16 01:42:11] Threads: 4
[2024-05-16 01:42:11] Checking for CVMFS
[2024-05-16 01:42:11] No cvmfs_config command found, will try listing directly
[2024-05-16 01:42:11] CVMFS is ok
[2024-05-16 01:42:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 01:42:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 01:42:11] Further information can be found at the LHC@home message board.
[2024-05-16 01:42:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 01:42:11] Checking for apptainer binary...
[2024-05-16 01:42:11] which: no apptainer in ((null))
[2024-05-16 01:42:11] apptainer is not installed, using version from CVMFS
[2024-05-16 01:42:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 01:42:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-16 01:42:12] apptainer works
[2024-05-16 01:42:12] Set ATHENA_PROC_NUMBER=4
[2024-05-16 01:42:12] Set ATHENA_CORE_NUMBER=4
[2024-05-16 01:42:12] Starting ATLAS job with PandaID=6205838085
[2024-05-16 01:42:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 05:07:15]  *** The last 200 lines of the pilot log: ***
[2024-05-16 05:07:15] 2024-05-16 03:06:57,475 | INFO     | -- intersect: -61402315173.10354
[2024-05-16 05:07:15] 2024-05-16 03:06:57,475 | INFO     | intersect: -61402315173.10354
[2024-05-16 05:07:15] 2024-05-16 03:06:57,475 | INFO     | chi2: 4.1472165917536525
[2024-05-16 05:07:15] 2024-05-16 03:06:57,475 | INFO     | model: linear, x: [1715816570.0, 1715816631.0, 1715816692.0, 1715816753.0, 1715816814.0, 1715816875.0, 1715816936.0, 1715816997.0, 1715817058.0, 1715817119.0, 1715
[2024-05-16 05:07:15] 2024-05-16 03:06:57,476 | INFO     | sum of square deviations: 2334722845.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,477 | INFO     | sum of deviations: 87690238747.50002
[2024-05-16 05:07:15] 2024-05-16 03:06:57,477 | INFO     | mean x: 1715822517.5
[2024-05-16 05:07:15] 2024-05-16 03:06:57,477 | INFO     | mean y: 2285982.7397959186
[2024-05-16 05:07:15] 2024-05-16 03:06:57,477 | INFO     | -- intersect: -64442573727.326355
[2024-05-16 05:07:15] 2024-05-16 03:06:57,477 | INFO     | intersect: -64442573727.326355
[2024-05-16 05:07:15] 2024-05-16 03:06:57,478 | INFO     | chi2: 4.147327096942131
[2024-05-16 05:07:15] 2024-05-16 03:06:57,478 | INFO     | current chi2=4.147327096942131 (change=-0.002664562750318159 %)
[2024-05-16 05:07:15] 2024-05-16 03:06:57,478 | INFO     | right removable region: 195
[2024-05-16 05:07:15] 2024-05-16 03:06:57,478 | INFO     | model: linear, x: [1715816875.0, 1715816936.0, 1715816997.0, 1715817058.0, 1715817119.0, 1715817180.0, 1715817241.0, 1715817302.0, 1715817363.0, 1715817424.0, 1715
[2024-05-16 05:07:15] 2024-05-16 03:06:57,478 | INFO     | sum of square deviations: 2334722845.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,480 | INFO     | sum of deviations: 43091016862.5
[2024-05-16 05:07:15] 2024-05-16 03:06:57,480 | INFO     | mean x: 1715822822.5
[2024-05-16 05:07:15] 2024-05-16 03:06:57,480 | INFO     | mean y: 2327016.31122449
[2024-05-16 05:07:15] 2024-05-16 03:06:57,480 | INFO     | -- intersect: -31665907324.97301
[2024-05-16 05:07:15] 2024-05-16 03:06:57,480 | INFO     | intersect: -31665907324.97301
[2024-05-16 05:07:15] 2024-05-16 03:06:57,480 | INFO     | chi2: 1.598638748670448
[2024-05-16 05:07:15] 2024-05-16 03:06:57,480 | INFO     | current chi2=1.598638748670448 (change=61.452730685704005 %)
[2024-05-16 05:07:15] 2024-05-16 03:06:57,481 | INFO     | model: linear, x: [1715817180.0, 1715817241.0, 1715817302.0, 1715817363.0, 1715817424.0, 1715817485.0, 1715817546.0, 1715817607.0, 1715817668.0, 1715817729.0, 1715
[2024-05-16 05:07:15] 2024-05-16 03:06:57,481 | INFO     | sum of square deviations: 2160561440.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,482 | INFO     | sum of deviations: 5002478240.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,482 | INFO     | mean x: 1715822975.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,482 | INFO     | mean y: 2360371.0418848167
[2024-05-16 05:07:15] 2024-05-16 03:06:57,482 | INFO     | -- intersect: -3970388071.663621
[2024-05-16 05:07:15] 2024-05-16 03:06:57,482 | INFO     | intersect: -3970388071.663621
[2024-05-16 05:07:15] 2024-05-16 03:06:57,483 | INFO     | chi2: 0.0674820686371772
[2024-05-16 05:07:15] 2024-05-16 03:06:57,483 | INFO     | current chi2=0.0674820686371772 (change=95.7787793713057 %)
[2024-05-16 05:07:15] 2024-05-16 03:06:57,483 | INFO     | model: linear, x: [1715817485.0, 1715817546.0, 1715817607.0, 1715817668.0, 1715817729.0, 1715817790.0, 1715817851.0, 1715817912.0, 1715817973.0, 1715818034.0, 1715
[2024-05-16 05:07:15] 2024-05-16 03:06:57,483 | INFO     | sum of square deviations: 1995283922.5
[2024-05-16 05:07:15] 2024-05-16 03:06:57,484 | INFO     | sum of deviations: -368215001.49999994
[2024-05-16 05:07:15] 2024-05-16 03:06:57,484 | INFO     | mean x: 1715823127.5
[2024-05-16 05:07:15] 2024-05-16 03:06:57,484 | INFO     | mean y: 2365259.0161290322
[2024-05-16 05:07:15] 2024-05-16 03:06:57,485 | INFO     | -- intersect: 319007822.1830495
[2024-05-16 05:07:15] 2024-05-16 03:06:57,485 | INFO     | intersect: 319007822.1830495
[2024-05-16 05:07:15] 2024-05-16 03:06:57,485 | INFO     | chi2: 0.003930829472527978
[2024-05-16 05:07:15] 2024-05-16 03:06:57,485 | INFO     | current chi2=0.003930829472527978 (change=94.17500151979277 %)
[2024-05-16 05:07:15] 2024-05-16 03:06:57,485 | INFO     | model: linear, x: [1715817790.0, 1715817851.0, 1715817912.0, 1715817973.0, 1715818034.0, 1715818095.0, 1715818156.0, 1715818217.0, 1715818278.0, 1715818339.0, 1715
[2024-05-16 05:07:15] 2024-05-16 03:06:57,485 | INFO     | sum of square deviations: 1838657730.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,486 | INFO     | sum of deviations: 41032992.00000025
[2024-05-16 05:07:15] 2024-05-16 03:06:57,487 | INFO     | mean x: 1715823280.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,487 | INFO     | mean y: 2364858.149171271
[2024-05-16 05:07:15] 2024-05-16 03:06:57,487 | INFO     | -- intersect: -35926859.64740536
[2024-05-16 05:07:15] 2024-05-16 03:06:57,487 | INFO     | intersect: -35926859.64740536
[2024-05-16 05:07:15] 2024-05-16 03:06:57,487 | INFO     | chi2: 0.0037147385236120465
[2024-05-16 05:07:15] 2024-05-16 03:06:57,487 | INFO     | current chi2=0.0037147385236120465 (change=5.497337150496126 %)
[2024-05-16 05:07:15] 2024-05-16 03:06:57,487 | INFO     | left removable region: 40
[2024-05-16 05:07:15] 2024-05-16 03:06:57,488 | INFO     | model: linear, x: [1715819010.0, 1715819071.0, 1715819132.0, 1715819193.0, 1715819254.0, 1715819315.0, 1715819376.0, 1715819437.0, 1715819498.0, 1715819559.0, 1715
[2024-05-16 05:07:15] 2024-05-16 03:06:57,488 | INFO     | sum of square deviations: 1154663510.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,489 | INFO     | sum of deviations: 2107909717.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,489 | INFO     | mean x: 1715823707.0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,489 | INFO     | mean y: 2362289.6774193547
[2024-05-16 05:07:15] 2024-05-16 03:06:57,489 | INFO     | -- intersect: -3129980105.5925765
[2024-05-16 05:07:15] 2024-05-16 03:06:57,489 | INFO     | intersect: -3129980105.5925765
[2024-05-16 05:07:15] 2024-05-16 03:06:57,489 | INFO     | chi2: 0.00018307377147704415
[2024-05-16 05:07:15] 2024-05-16 03:06:57,489 | INFO     | -- intersect: -3129980105.5925765
[2024-05-16 05:07:15] 2024-05-16 03:06:57,489 | INFO     | current memory leak: 1.83 B/s (using 155 data points, chi2=0.00)
[2024-05-16 05:07:15] 2024-05-16 03:06:57,490 | INFO     | ..............................
[2024-05-16 05:07:15] 2024-05-16 03:06:57,490 | INFO     | . Timing measurements:
[2024-05-16 05:07:15] 2024-05-16 03:06:57,490 | INFO     | . get job = 0 s
[2024-05-16 05:07:15] 2024-05-16 03:06:57,490 | INFO     | . initial setup = 1 s
[2024-05-16 05:07:15] 2024-05-16 03:06:57,490 | INFO     | . payload setup = 6 s
[2024-05-16 05:07:15] 2024-05-16 03:06:57,490 | INFO     | . stage-in = 0 s
[2024-05-16 05:07:15] 2024-05-16 03:06:57,490 | INFO     | . payload execution = 12237 s
[2024-05-16 05:07:15] 2024-05-16 03:06:57,490 | INFO     | . stage-out = 1 s
[2024-05-16 05:07:15] 2024-05-16 03:06:57,491 | INFO     | . log creation = 0 s
[2024-05-16 05:07:15] 2024-05-16 03:06:57,491 | INFO     | ..............................
[2024-05-16 05:07:15] 2024-05-16 03:06:57,578 | INFO     | 
[2024-05-16 05:07:15] 2024-05-16 03:06:57,579 | INFO     | job summary report
[2024-05-16 05:07:15] 2024-05-16 03:06:57,579 | INFO     | --------------------------------------------------
[2024-05-16 05:07:15] 2024-05-16 03:06:57,579 | INFO     | PanDA job id: 6205838085
[2024-05-16 05:07:15] 2024-05-16 03:06:57,579 | INFO     | task id: 38776125
[2024-05-16 05:07:15] 2024-05-16 03:06:57,579 | INFO     | errors: (none)
[2024-05-16 05:07:15] 2024-05-16 03:06:57,579 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 05:07:15] 2024-05-16 03:06:57,579 | INFO     | pilot state: finished 
[2024-05-16 05:07:15] 2024-05-16 03:06:57,579 | INFO     | transexitcode: 0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,579 | INFO     | exeerrorcode: 0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | exeerrordiag: 
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | exitcode: 0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | exitmsg: OK
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | cpuconsumptiontime: 45914 s
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | nevents: 400
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | neventsw: 0
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | pid: 3121215
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | pgrp: 3121215
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | corecount: 4
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | event service: False
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | sizes: {0: 2391298, 1: 2392233, 5: 2392439, 12: 2392495, 12248: 2422192, 12250: 2431358, 12259: 2431472}
[2024-05-16 05:07:15] 2024-05-16 03:06:57,580 | INFO     | --------------------------------------------------
[2024-05-16 05:07:15] 2024-05-16 03:06:57,581 | INFO     | 
[2024-05-16 05:07:15] 2024-05-16 03:06:57,581 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-05-16 05:07:15] 2024-05-16 03:06:57,602 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,604 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 05:07:15] 2024-05-16 03:06:57,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,604 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 05:07:15] 2024-05-16 03:06:57,605 | INFO     | job 6205838085 has completed (purged errors)
[2024-05-16 05:07:15] 2024-05-16 03:06:57,605 | INFO     | overall cleanup function is called
[2024-05-16 05:07:15] 2024-05-16 03:06:58,613 | INFO     | --- collectZombieJob: --- 10, [3121215]
[2024-05-16 05:07:15] 2024-05-16 03:06:58,613 | INFO     | zombie collector waiting for pid 3121215
[2024-05-16 05:07:15] 2024-05-16 03:06:58,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 05:07:15] 2024-05-16 03:06:59,618 | INFO     | collected zombie processes
[2024-05-16 05:07:15] 2024-05-16 03:06:59,618 | INFO     | will now attempt to kill all subprocesses of pid=3121215
[2024-05-16 05:07:15] 2024-05-16 03:06:59,868 | INFO     | process IDs to be killed: [3121215] (in reverse order)
[2024-05-16 05:07:15] 2024-05-16 03:07:00,094 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 05:07:15] 2024-05-16 03:07:00,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 05:07:15] 2024-05-16 03:07:00,114 | INFO     | did not find any defunct processes belonging to 3121215
[2024-05-16 05:07:15] 2024-05-16 03:07:00,129 | INFO     | did not find any defunct processes belonging to 3121215
[2024-05-16 05:07:15] 2024-05-16 03:07:00,129 | INFO     | ready for new job
[2024-05-16 05:07:15] 2024-05-16 03:07:00,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 05:07:15] 2024-05-16 03:07:00,131 | INFO     | *************************************
[2024-05-16 05:07:15] 2024-05-16 03:07:00,131 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 05:07:15] 2024-05-16 03:07:00,132 | INFO     | *************************************
[2024-05-16 05:07:15] 2024-05-16 03:07:00,132 | INFO     | 
[2024-05-16 05:07:15] 2024-05-16 03:07:00,139 | INFO     | architecture information:
[2024-05-16 05:07:15] 2024-05-16 03:07:00,139 | INFO     | executing command: cat /etc/os-release
[2024-05-16 05:07:15] 2024-05-16 03:07:00,158 | INFO     | cat /etc/os-release:
[2024-05-16 05:07:15] NAME="CentOS Linux"
[2024-05-16 05:07:15] VERSION="7 (Core)"
[2024-05-16 05:07:15] ID="centos"
[2024-05-16 05:07:15] ID_LIKE="rhel fedora"
[2024-05-16 05:07:15] VERSION_ID="7"
[2024-05-16 05:07:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 05:07:15] ANSI_COLOR="0;31"
[2024-05-16 05:07:15] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 05:07:15] HOME_URL="https://www.centos.org/"
[2024-05-16 05:07:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 05:07:15] 
[2024-05-16 05:07:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 05:07:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 05:07:15] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 05:07:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 05:07:15] 
[2024-05-16 05:07:15] 2024-05-16 03:07:00,159 | INFO     | *************************************
[2024-05-16 05:07:15] 2024-05-16 03:07:00,661 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-05-16 05:07:15] 2024-05-16 03:07:00,678 | INFO     | sufficient remaining disk space (3111477313536 B)
[2024-05-16 05:07:15] 2024-05-16 03:07:00,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 05:07:15] 2024-05-16 03:07:00,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 05:07:15] 2024-05-16 03:07:00,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 05:07:15] 2024-05-16 03:07:00,679 | INFO     | aborting loop
[2024-05-16 05:07:15] 2024-05-16 03:07:00,898 | INFO     | all job control threads have been joined
[2024-05-16 05:07:15] 2024-05-16 03:07:01,287 | INFO     | all data control threads have been joined
[2024-05-16 05:07:15] 2024-05-16 03:07:01,298 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 05:07:15] 2024-05-16 03:07:01,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 05:07:15] 2024-05-16 03:07:01,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 05:07:15] 2024-05-16 03:07:01,636 | INFO     | all payload control threads have been joined
[2024-05-16 05:07:15] 2024-05-16 03:07:01,683 | INFO     | [job] retrieve thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:01,684 | INFO     | [job] job monitor thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:01,903 | INFO     | [job] control thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:01,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 05:07:15] 2024-05-16 03:07:02,061 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:02,094 | INFO     | [job] validate thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:02,217 | INFO     | [payload] validate_post thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:02,259 | INFO     | [data] copytool_in thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:02,292 | INFO     | [data] control thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:02,410 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:02,412 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:02,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 05:07:15] 2024-05-16 03:07:02,591 | INFO     | [payload] failed_post thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:02,641 | INFO     | [payload] control thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:02,663 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:03,593 | INFO     | [job] queue monitor thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:03,937 | INFO     | [data] copytool_out thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:04,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 05:07:15] 2024-05-16 03:07:08,036 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 05:07:15] 2024-05-16 03:07:09,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47737466491968)>', '<ExcThread(monitor, started 47737639843584)>']
[2024-05-16 05:07:15] 2024-05-16 03:07:10,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 05:07:15] 2024-05-16 03:07:10,339 | INFO     | [monitor] control thread has ended
[2024-05-16 05:07:15] 2024-05-16 03:07:14,462 | INFO     | all workflow threads have been joined
[2024-05-16 05:07:15] 2024-05-16 03:07:14,462 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 05:07:15] 2024-05-16 03:07:14,463 | INFO     | traces error code: 0
[2024-05-16 05:07:15] 2024-05-16 03:07:14,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 05:07:15] 2024-05-16 03:07:14,577 [wrapper] ==== pilot stdout END ====
[2024-05-16 05:07:15] 2024-05-16 03:07:14,580 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 05:07:15] 2024-05-16 03:07:14,582 [wrapper] pilotpid: 3113704
[2024-05-16 05:07:15] 2024-05-16 03:07:14,584 [wrapper] Pilot exit status: 0
[2024-05-16 05:07:15] 2024-05-16 03:07:14,592 [wrapper] pandaids: 6205838085
[2024-05-16 05:07:15] 2024-05-16 03:07:14,704 [wrapper] cleanup: SIGTERM to supervisor_pilot  176190 3113705
[2024-05-16 05:07:15] 2024-05-16 03:07:14,707 [wrapper] Test setup, not cleaning
[2024-05-16 05:07:15] 2024-05-16 03:07:14,709 [wrapper] ==== wrapper stdout END ====
[2024-05-16 05:07:15] 2024-05-16 03:07:14,711 [wrapper] ==== wrapper stderr END ====
[2024-05-16 05:07:15] 2024-05-16 03:07:14,715 [wrapper] apfmon messages muted
[2024-05-16 05:07:15]  *** Error codes and diagnostics ***
[2024-05-16 05:07:15]     "exeErrorCode": 0,
[2024-05-16 05:07:15]     "exeErrorDiag": "",
[2024-05-16 05:07:15]     "pilotErrorCode": 0,
[2024-05-16 05:07:15]     "pilotErrorDiag": "",
[2024-05-16 05:07:15]  *** Listing of results directory ***
[2024-05-16 05:07:15] total 830776
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc    467845 May 13 15:49 pilot3.tar.gz
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc      5633 May 13 15:53 queuedata.json
[2024-05-16 05:07:15] -rwx------ 1 boinc boinc     32251 May 13 15:53 runpilot2-wrapper.sh
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc       100 May 16 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 05:07:15] -rwxr-xr-x 1 boinc boinc      7986 May 16 01:42 run_atlas
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc       105 May 16 01:42 job.xml
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc      6644 May 16 01:42 init_data.xml
[2024-05-16 05:07:15] -rw-r--r-- 2 boinc boinc 597407479 May 16 01:42 EVNT.38776119._000260.pool.root.1
[2024-05-16 05:07:15] -rw-r--r-- 2 boinc boinc    480007 May 16 01:42 input.tar.gz
[2024-05-16 05:07:15] -rw-r--r-- 2 boinc boinc     17537 May 16 01:42 start_atlas.sh
[2024-05-16 05:07:15] drwxrwx--x 2 boinc boinc      4096 May 16 01:42 shared
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc         0 May 16 01:42 boinc_lockfile
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc      2633 May 16 01:42 pandaJob.out
[2024-05-16 05:07:15] -rw------- 1 boinc boinc       424 May 16 01:42 setup.sh.local
[2024-05-16 05:07:15] -rw------- 1 boinc boinc   1011347 May 16 01:42 agis_schedconf.cvmfs.json
[2024-05-16 05:07:15] -rw------- 1 boinc boinc   1324701 May 16 01:42 cric_ddmendpoints.json
[2024-05-16 05:07:15] drwx------ 4 boinc boinc      4096 May 16 01:42 pilot3
[2024-05-16 05:07:15] -rw------- 1 boinc boinc        95 May 16 05:06 pilot_heartbeat.json
[2024-05-16 05:07:15] -rw------- 1 boinc boinc 246590336 May 16 05:06 HITS.38776125._006262.pool.root.1
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc       532 May 16 05:06 boinc_task_state.xml
[2024-05-16 05:07:15] -rw------- 1 boinc boinc      1037 May 16 05:06 memory_monitor_summary.json
[2024-05-16 05:07:15] -rw------- 1 boinc boinc         0 May 16 05:06 agis_ddmendpoints.agis.ALL.json
[2024-05-16 05:07:15] -rw------- 1 boinc boinc    322724 May 16 05:06 log.38776125._006262.job.log.tgz.1
[2024-05-16 05:07:15] -rw------- 1 boinc boinc      7713 May 16 05:06 heartbeat.json
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc      8192 May 16 05:07 boinc_mmap_file
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc        28 May 16 05:07 wrapper_checkpoint.txt
[2024-05-16 05:07:15] -rw------- 1 boinc boinc      4222 May 16 05:07 pilotlog.txt
[2024-05-16 05:07:15] -rw------- 1 boinc boinc   1271309 May 16 05:07 log.38776125._006262.job.log.1
[2024-05-16 05:07:15] -rw------- 1 boinc boinc       357 May 16 05:07 output.list
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc       620 May 16 05:07 runtime_log
[2024-05-16 05:07:15] -rw------- 1 boinc boinc   1617920 May 16 05:07 result.tar.gz
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc     11410 May 16 05:07 runtime_log.err
[2024-05-16 05:07:15] -rw------- 1 boinc boinc       657 May 16 05:07 dsVKDmpIlQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmGqKKDmVidfcm.diag
[2024-05-16 05:07:15] -rw-r--r-- 1 boinc boinc     21293 May 16 05:07 stderr.txt
[2024-05-16 05:07:15] HITS file was successfully produced:
[2024-05-16 05:07:15] -rw------- 1 boinc boinc 246590336 May 16 05:06 shared/HITS.pool.root.1
[2024-05-16 05:07:15]  *** Contents of shared directory: ***
[2024-05-16 05:07:15] total 826300
[2024-05-16 05:07:15] -rw-r--r-- 2 boinc boinc 597407479 May 16 01:42 ATLAS.root_0
[2024-05-16 05:07:15] -rw-r--r-- 2 boinc boinc    480007 May 16 01:42 input.tar.gz
[2024-05-16 05:07:15] -rw-r--r-- 2 boinc boinc     17537 May 16 01:42 start_atlas.sh
[2024-05-16 05:07:15] -rw------- 1 boinc boinc 246590336 May 16 05:06 HITS.pool.root.1
[2024-05-16 05:07:15] -rw------- 1 boinc boinc   1617920 May 16 05:07 result.tar.gz
05:07:16 (3108441): run_atlas exited; CPU time 45651.823543
05:07:16 (3108441): called boinc_finish(0)

</stderr_txt>
]]>

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