Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:57 (2858643): wrapper (7.7.26015): starting
11:46:57 (2858643): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 11:46:57] Arguments: --nthreads 4
[2024-05-15 11:46:57] Threads: 4
[2024-05-15 11:46:57] Checking for CVMFS
[2024-05-15 11:46:57] No cvmfs_config command found, will try listing directly
[2024-05-15 11:46:57] CVMFS is ok
[2024-05-15 11:46:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 11:46:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 11:46:57] Further information can be found at the LHC@home message board.
[2024-05-15 11:46:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 11:46:57] Checking for apptainer binary...
[2024-05-15 11:46:57] which: no apptainer in ((null))
[2024-05-15 11:46:57] apptainer is not installed, using version from CVMFS
[2024-05-15 11:46:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 11:46:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-15 11:46:58] apptainer works
[2024-05-15 11:46:58] Set ATHENA_PROC_NUMBER=4
[2024-05-15 11:46:58] Set ATHENA_CORE_NUMBER=4
[2024-05-15 11:46:58] Starting ATLAS job with PandaID=6205836016
[2024-05-15 11:46:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 14:18:43]  *** The last 200 lines of the pilot log: ***
[2024-05-15 14:18:43] 2024-05-15 12:18:21,302 | INFO     | model: linear, x: [1715766451.0, 1715766512.0, 1715766573.0, 1715766634.0, 1715766695.0, 1715766756.0, 1715766817.0, 1715766878.0, 1715766939.0, 1715767000.0, 1715
[2024-05-15 14:18:43] 2024-05-15 12:18:21,302 | INFO     | sum of square deviations: 1025693650.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,303 | INFO     | sum of deviations: 59490684015.000015
[2024-05-15 14:18:43] 2024-05-15 12:18:21,303 | INFO     | mean x: 1715770965.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,303 | INFO     | mean y: 2236103.1409395975
[2024-05-15 14:18:43] 2024-05-15 12:18:21,303 | INFO     | -- intersect: -99513236495.25786
[2024-05-15 14:18:43] 2024-05-15 12:18:21,303 | INFO     | intersect: -99513236495.25786
[2024-05-15 14:18:43] 2024-05-15 12:18:21,303 | INFO     | chi2: 4.876238785303135
[2024-05-15 14:18:43] 2024-05-15 12:18:21,303 | INFO     | model: linear, x: [1715766451.0, 1715766512.0, 1715766573.0, 1715766634.0, 1715766695.0, 1715766756.0, 1715766817.0, 1715766878.0, 1715766939.0, 1715767000.0, 1715
[2024-05-15 14:18:43] 2024-05-15 12:18:21,304 | INFO     | sum of square deviations: 925859220.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,304 | INFO     | sum of deviations: 66456493370.999985
[2024-05-15 14:18:43] 2024-05-15 12:18:21,304 | INFO     | mean x: 1715770812.5
[2024-05-15 14:18:43] 2024-05-15 12:18:21,304 | INFO     | mean y: 2246348.861111111
[2024-05-15 14:18:43] 2024-05-15 12:18:21,304 | INFO     | -- intersect: -123152666583.86478
[2024-05-15 14:18:43] 2024-05-15 12:18:21,305 | INFO     | intersect: -123152666583.86478
[2024-05-15 14:18:43] 2024-05-15 12:18:21,305 | INFO     | chi2: 4.076430849487333
[2024-05-15 14:18:43] 2024-05-15 12:18:21,305 | INFO     | current chi2=4.076430849487333 (change=16.40214868530236 %)
[2024-05-15 14:18:43] 2024-05-15 12:18:21,305 | INFO     | right removable region: 143
[2024-05-15 14:18:43] 2024-05-15 12:18:21,305 | INFO     | model: linear, x: [1715766756.0, 1715766817.0, 1715766878.0, 1715766939.0, 1715767000.0, 1715767061.0, 1715767122.0, 1715767183.0, 1715767244.0, 1715767305.0, 1715
[2024-05-15 14:18:43] 2024-05-15 12:18:21,305 | INFO     | sum of square deviations: 925859220.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,306 | INFO     | sum of deviations: 26113916573.000008
[2024-05-15 14:18:43] 2024-05-15 12:18:21,306 | INFO     | mean x: 1715771117.5
[2024-05-15 14:18:43] 2024-05-15 12:18:21,306 | INFO     | mean y: 2286890.847222222
[2024-05-15 14:18:43] 2024-05-15 12:18:21,306 | INFO     | -- intersect: -48391143614.44925
[2024-05-15 14:18:43] 2024-05-15 12:18:21,306 | INFO     | intersect: -48391143614.44925
[2024-05-15 14:18:43] 2024-05-15 12:18:21,306 | INFO     | chi2: 2.44203400193522
[2024-05-15 14:18:43] 2024-05-15 12:18:21,306 | INFO     | current chi2=2.44203400193522 (change=49.91972072213832 %)
[2024-05-15 14:18:43] 2024-05-15 12:18:21,307 | INFO     | model: linear, x: [1715767061.0, 1715767122.0, 1715767183.0, 1715767244.0, 1715767305.0, 1715767366.0, 1715767427.0, 1715767488.0, 1715767549.0, 1715767610.0, 1715
[2024-05-15 14:18:43] 2024-05-15 12:18:21,307 | INFO     | sum of square deviations: 832722590.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,307 | INFO     | sum of deviations: -838958925.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,307 | INFO     | mean x: 1715771270.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,308 | INFO     | mean y: 2331039.762589928
[2024-05-15 14:18:43] 2024-05-15 12:18:21,308 | INFO     | -- intersect: 1730951876.4149075
[2024-05-15 14:18:43] 2024-05-15 12:18:21,308 | INFO     | intersect: 1730951876.4149075
[2024-05-15 14:18:43] 2024-05-15 12:18:21,308 | INFO     | chi2: 0.990603709823858
[2024-05-15 14:18:43] 2024-05-15 12:18:21,308 | INFO     | current chi2=0.990603709823858 (change=59.43530233244738 %)
[2024-05-15 14:18:43] 2024-05-15 12:18:21,308 | INFO     | model: linear, x: [1715767366.0, 1715767427.0, 1715767488.0, 1715767549.0, 1715767610.0, 1715767671.0, 1715767732.0, 1715767793.0, 1715767854.0, 1715767915.0, 1715
[2024-05-15 14:18:43] 2024-05-15 12:18:21,308 | INFO     | sum of square deviations: 746051197.5
[2024-05-15 14:18:43] 2024-05-15 12:18:21,309 | INFO     | sum of deviations: -6627927733.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,309 | INFO     | mean x: 1715771422.5
[2024-05-15 14:18:43] 2024-05-15 12:18:21,309 | INFO     | mean y: 2341014.567164179
[2024-05-15 14:18:43] 2024-05-15 12:18:21,309 | INFO     | -- intersect: 15245274787.455597
[2024-05-15 14:18:43] 2024-05-15 12:18:21,309 | INFO     | intersect: 15245274787.455597
[2024-05-15 14:18:43] 2024-05-15 12:18:21,309 | INFO     | chi2: 0.8365519904698953
[2024-05-15 14:18:43] 2024-05-15 12:18:21,309 | INFO     | current chi2=0.8365519904698953 (change=15.551296429260814 %)
[2024-05-15 14:18:43] 2024-05-15 12:18:21,309 | INFO     | left removable region: 30
[2024-05-15 14:18:43] 2024-05-15 12:18:21,310 | INFO     | model: linear, x: [1715768281.0, 1715768342.0, 1715768403.0, 1715768464.0, 1715768525.0, 1715768586.0, 1715768647.0, 1715768708.0, 1715768769.0, 1715768830.0, 1715
[2024-05-15 14:18:43] 2024-05-15 12:18:21,310 | INFO     | sum of square deviations: 447383272.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,310 | INFO     | sum of deviations: 1151217437.0000002
[2024-05-15 14:18:43] 2024-05-15 12:18:21,310 | INFO     | mean x: 1715771697.0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,310 | INFO     | mean y: 2357878.5044247787
[2024-05-15 14:18:43] 2024-05-15 12:18:21,310 | INFO     | -- intersect: -4412707277.301134
[2024-05-15 14:18:43] 2024-05-15 12:18:21,310 | INFO     | intersect: -4412707277.301134
[2024-05-15 14:18:43] 2024-05-15 12:18:21,311 | INFO     | chi2: 0.0001687817985573731
[2024-05-15 14:18:43] 2024-05-15 12:18:21,311 | INFO     | -- intersect: -4412707277.301134
[2024-05-15 14:18:43] 2024-05-15 12:18:21,311 | INFO     | current memory leak: 2.57 B/s (using 113 data points, chi2=0.00)
[2024-05-15 14:18:43] 2024-05-15 12:18:21,311 | INFO     | ..............................
[2024-05-15 14:18:43] 2024-05-15 12:18:21,311 | INFO     | . Timing measurements:
[2024-05-15 14:18:43] 2024-05-15 12:18:21,311 | INFO     | . get job = 0 s
[2024-05-15 14:18:43] 2024-05-15 12:18:21,311 | INFO     | . initial setup = 1 s
[2024-05-15 14:18:43] 2024-05-15 12:18:21,311 | INFO     | . payload setup = 4 s
[2024-05-15 14:18:43] 2024-05-15 12:18:21,311 | INFO     | . stage-in = 0 s
[2024-05-15 14:18:43] 2024-05-15 12:18:21,312 | INFO     | . payload execution = 9045 s
[2024-05-15 14:18:43] 2024-05-15 12:18:21,312 | INFO     | . stage-out = 0 s
[2024-05-15 14:18:43] 2024-05-15 12:18:21,312 | INFO     | . log creation = 0 s
[2024-05-15 14:18:43] 2024-05-15 12:18:21,312 | INFO     | ..............................
[2024-05-15 14:18:43] 2024-05-15 12:18:21,367 | INFO     | 
[2024-05-15 14:18:43] 2024-05-15 12:18:21,367 | INFO     | job summary report
[2024-05-15 14:18:43] 2024-05-15 12:18:21,367 | INFO     | --------------------------------------------------
[2024-05-15 14:18:43] 2024-05-15 12:18:21,367 | INFO     | PanDA job id: 6205836016
[2024-05-15 14:18:43] 2024-05-15 12:18:21,367 | INFO     | task id: 38776125
[2024-05-15 14:18:43] 2024-05-15 12:18:21,367 | INFO     | errors: (none)
[2024-05-15 14:18:43] 2024-05-15 12:18:21,367 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | pilot state: finished 
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | transexitcode: 0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | exeerrorcode: 0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | exeerrordiag: 
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | exitcode: 0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | exitmsg: OK
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | cpuconsumptiontime: 33235 s
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | nevents: 400
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | neventsw: 0
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | pid: 2870991
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | pgrp: 2870991
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | corecount: 4
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | event service: False
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | sizes: {0: 2394405, 1: 2394519, 4: 2394753, 11: 2394781, 9053: 2423064, 9054: 2432231, 9059: 2432345}
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | --------------------------------------------------
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | 
[2024-05-15 14:18:43] 2024-05-15 12:18:21,368 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-05-15 14:18:43] 2024-05-15 12:18:21,385 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,385 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,385 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,385 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,385 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | job 6205836016 has completed (purged errors)
[2024-05-15 14:18:43] 2024-05-15 12:18:21,386 | INFO     | overall cleanup function is called
[2024-05-15 14:18:43] 2024-05-15 12:18:22,393 | INFO     | --- collectZombieJob: --- 10, [2870991]
[2024-05-15 14:18:43] 2024-05-15 12:18:22,393 | INFO     | zombie collector waiting for pid 2870991
[2024-05-15 14:18:43] 2024-05-15 12:18:22,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 14:18:43] 2024-05-15 12:18:23,398 | INFO     | collected zombie processes
[2024-05-15 14:18:43] 2024-05-15 12:18:23,398 | INFO     | will now attempt to kill all subprocesses of pid=2870991
[2024-05-15 14:18:43] 2024-05-15 12:18:23,599 | INFO     | process IDs to be killed: [2870991] (in reverse order)
[2024-05-15 14:18:43] 2024-05-15 12:18:23,780 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 14:18:43] 2024-05-15 12:18:23,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 14:18:43] 2024-05-15 12:18:23,798 | INFO     | did not find any defunct processes belonging to 2870991
[2024-05-15 14:18:43] 2024-05-15 12:18:23,809 | INFO     | did not find any defunct processes belonging to 2870991
[2024-05-15 14:18:43] 2024-05-15 12:18:23,809 | INFO     | ready for new job
[2024-05-15 14:18:43] 2024-05-15 12:18:23,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 14:18:43] 2024-05-15 12:18:23,810 | INFO     | *************************************
[2024-05-15 14:18:43] 2024-05-15 12:18:23,811 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 14:18:43] 2024-05-15 12:18:23,811 | INFO     | *************************************
[2024-05-15 14:18:43] 2024-05-15 12:18:23,811 | INFO     | 
[2024-05-15 14:18:43] 2024-05-15 12:18:23,815 | INFO     | architecture information:
[2024-05-15 14:18:43] 2024-05-15 12:18:23,815 | INFO     | executing command: cat /etc/os-release
[2024-05-15 14:18:43] 2024-05-15 12:18:23,835 | INFO     | cat /etc/os-release:
[2024-05-15 14:18:43] NAME="CentOS Linux"
[2024-05-15 14:18:43] VERSION="7 (Core)"
[2024-05-15 14:18:43] ID="centos"
[2024-05-15 14:18:43] ID_LIKE="rhel fedora"
[2024-05-15 14:18:43] VERSION_ID="7"
[2024-05-15 14:18:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 14:18:43] ANSI_COLOR="0;31"
[2024-05-15 14:18:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 14:18:43] HOME_URL="https://www.centos.org/"
[2024-05-15 14:18:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 14:18:43] 
[2024-05-15 14:18:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 14:18:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 14:18:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 14:18:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 14:18:43] 
[2024-05-15 14:18:43] 2024-05-15 12:18:23,836 | INFO     | *************************************
[2024-05-15 14:18:43] 2024-05-15 12:18:24,338 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-05-15 14:18:43] 2024-05-15 12:18:24,356 | INFO     | sufficient remaining disk space (2999022780416 B)
[2024-05-15 14:18:43] 2024-05-15 12:18:24,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 14:18:43] 2024-05-15 12:18:24,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 14:18:43] 2024-05-15 12:18:24,357 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 14:18:43] 2024-05-15 12:18:24,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 14:18:43] 2024-05-15 12:18:24,358 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 14:18:43] 2024-05-15 12:18:24,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 14:18:43] 2024-05-15 12:18:24,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 14:18:43] 2024-05-15 12:18:24,384 | INFO     | all job control threads have been joined
[2024-05-15 14:18:43] 2024-05-15 12:18:24,772 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-15 14:18:43] 2024-05-15 12:18:24,772 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-15 14:18:43] 2024-05-15 12:18:24,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 14:18:43] 2024-05-15 12:18:24,773 | INFO     | will abort loop
[2024-05-15 14:18:43] 2024-05-15 12:18:24,938 | INFO     | all payload control threads have been joined
[2024-05-15 14:18:43] 2024-05-15 12:18:25,161 | INFO     | all data control threads have been joined
[2024-05-15 14:18:43] 2024-05-15 12:18:25,361 | INFO     | [job] retrieve thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:25,389 | INFO     | [job] control thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:25,412 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:25,552 | INFO     | [payload] failed_post thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:25,625 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:25,642 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:25,777 | INFO     | [job] job monitor thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:25,943 | INFO     | [payload] control thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:26,137 | INFO     | [payload] validate_post thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:26,167 | INFO     | [data] control thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:26,363 | INFO     | [data] copytool_out thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:26,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 14:18:43] 2024-05-15 12:18:26,510 | INFO     | [data] copytool_in thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:26,670 | INFO     | [job] validate thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:26,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 14:18:43] 2024-05-15 12:18:27,381 | INFO     | [job] queue monitor thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:30,862 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:34,721 | INFO     | job.realtimelogging is not enabled
[2024-05-15 14:18:43] 2024-05-15 12:18:35,726 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 14:18:43] 2024-05-15 12:18:37,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47424760095808)>', '<ExcThread(monitor, started 47424931608320)>']
[2024-05-15 14:18:43] 2024-05-15 12:18:37,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 14:18:43] 2024-05-15 12:18:37,427 | INFO     | [monitor] control thread has ended
[2024-05-15 14:18:43] 2024-05-15 12:18:42,407 | INFO     | all workflow threads have been joined
[2024-05-15 14:18:43] 2024-05-15 12:18:42,407 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 14:18:43] 2024-05-15 12:18:42,408 | INFO     | traces error code: 0
[2024-05-15 14:18:43] 2024-05-15 12:18:42,408 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 14:18:43] 2024-05-15 12:18:42,497 [wrapper] ==== pilot stdout END ====
[2024-05-15 14:18:43] 2024-05-15 12:18:42,499 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 14:18:43] 2024-05-15 12:18:42,501 [wrapper] pilotpid: 2863350
[2024-05-15 14:18:43] 2024-05-15 12:18:42,504 [wrapper] Pilot exit status: 0
[2024-05-15 14:18:43] 2024-05-15 12:18:42,518 [wrapper] pandaids: 6205836016
[2024-05-15 14:18:43] 2024-05-15 12:18:42,597 [wrapper] cleanup: SIGTERM to supervisor_pilot 3825192 2863351
[2024-05-15 14:18:43] 2024-05-15 12:18:42,599 [wrapper] Test setup, not cleaning
[2024-05-15 14:18:43] 2024-05-15 12:18:42,601 [wrapper] ==== wrapper stdout END ====
[2024-05-15 14:18:43] 2024-05-15 12:18:42,602 [wrapper] ==== wrapper stderr END ====
[2024-05-15 14:18:43] 2024-05-15 12:18:42,606 [wrapper] apfmon messages muted
[2024-05-15 14:18:43]  *** Error codes and diagnostics ***
[2024-05-15 14:18:43]     "exeErrorCode": 0,
[2024-05-15 14:18:43]     "exeErrorDiag": "",
[2024-05-15 14:18:43]     "pilotErrorCode": 0,
[2024-05-15 14:18:43]     "pilotErrorDiag": "",
[2024-05-15 14:18:43]  *** Listing of results directory ***
[2024-05-15 14:18:43] total 842108
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc    467845 May 13 14:56 pilot3.tar.gz
[2024-05-15 14:18:43] -rwx------ 1 boinc boinc     32251 May 13 15:12 runpilot2-wrapper.sh
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc      5633 May 13 15:12 queuedata.json
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc       100 May 15 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 14:18:43] -rwxr-xr-x 1 boinc boinc      7986 May 15 11:46 run_atlas
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc       105 May 15 11:46 job.xml
[2024-05-15 14:18:43] -rw-r--r-- 2 boinc boinc 602272715 May 15 11:46 EVNT.38776119._000230.pool.root.1
[2024-05-15 14:18:43] -rw-r--r-- 2 boinc boinc     17537 May 15 11:46 start_atlas.sh
[2024-05-15 14:18:43] drwxrwx--x 2 boinc boinc      4096 May 15 11:46 shared
[2024-05-15 14:18:43] -rw-r--r-- 2 boinc boinc    480002 May 15 11:46 input.tar.gz
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc      6644 May 15 11:46 init_data.xml
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc         0 May 15 11:46 boinc_lockfile
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc      2640 May 15 11:46 pandaJob.out
[2024-05-15 14:18:43] -rw------- 1 boinc boinc       424 May 15 11:46 setup.sh.local
[2024-05-15 14:18:43] -rw------- 1 boinc boinc   1010936 May 15 11:47 agis_schedconf.cvmfs.json
[2024-05-15 14:18:43] -rw------- 1 boinc boinc         0 May 15 11:47 agis_ddmendpoints.agis.ALL.json
[2024-05-15 14:18:43] -rw------- 1 boinc boinc   1324588 May 15 11:47 cric_ddmendpoints.json
[2024-05-15 14:18:43] drwx------ 4 boinc boinc      4096 May 15 11:47 pilot3
[2024-05-15 14:18:43] -rw------- 1 boinc boinc        95 May 15 14:17 pilot_heartbeat.json
[2024-05-15 14:18:43] -rw------- 1 boinc boinc 253974407 May 15 14:17 HITS.38776125._005671.pool.root.1
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc       531 May 15 14:17 boinc_task_state.xml
[2024-05-15 14:18:43] -rw------- 1 boinc boinc      1041 May 15 14:18 memory_monitor_summary.json
[2024-05-15 14:18:43] -rw------- 1 boinc boinc    308720 May 15 14:18 log.38776125._005671.job.log.tgz.1
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc        27 May 15 14:18 wrapper_checkpoint.txt
[2024-05-15 14:18:43] -rw------- 1 boinc boinc      7714 May 15 14:18 heartbeat.json
[2024-05-15 14:18:43] -rw------- 1 boinc boinc      4604 May 15 14:18 pilotlog.txt
[2024-05-15 14:18:43] -rw------- 1 boinc boinc    963536 May 15 14:18 log.38776125._005671.job.log.1
[2024-05-15 14:18:43] -rw------- 1 boinc boinc       357 May 15 14:18 output.list
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc       620 May 15 14:18 runtime_log
[2024-05-15 14:18:43] -rw------- 1 boinc boinc   1290240 May 15 14:18 result.tar.gz
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc     11428 May 15 14:18 runtime_log.err
[2024-05-15 14:18:43] -rw------- 1 boinc boinc       657 May 15 14:18 MgFMDmiekQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmO2GKDmkUaYin.diag
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc      8192 May 15 14:18 boinc_mmap_file
[2024-05-15 14:18:43] -rw-r--r-- 1 boinc boinc     21358 May 15 14:18 stderr.txt
[2024-05-15 14:18:43] HITS file was successfully produced:
[2024-05-15 14:18:43] -rw------- 1 boinc boinc 253974407 May 15 14:17 shared/HITS.pool.root.1
[2024-05-15 14:18:43]  *** Contents of shared directory: ***
[2024-05-15 14:18:43] total 837944
[2024-05-15 14:18:43] -rw-r--r-- 2 boinc boinc 602272715 May 15 11:46 ATLAS.root_0
[2024-05-15 14:18:43] -rw-r--r-- 2 boinc boinc     17537 May 15 11:46 start_atlas.sh
[2024-05-15 14:18:43] -rw-r--r-- 2 boinc boinc    480002 May 15 11:46 input.tar.gz
[2024-05-15 14:18:43] -rw------- 1 boinc boinc 253974407 May 15 14:17 HITS.pool.root.1
[2024-05-15 14:18:43] -rw------- 1 boinc boinc   1290240 May 15 14:18 result.tar.gz
14:18:45 (2858643): run_atlas exited; CPU time 32936.939534
14:18:45 (2858643): called boinc_finish(0)

</stderr_txt>
]]>

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