Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:59:29 (2414581): wrapper (7.7.26015): starting
20:59:29 (2414581): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 20:59:29] Arguments: --nthreads 4
[2024-05-15 20:59:29] Threads: 4
[2024-05-15 20:59:29] Checking for CVMFS
[2024-05-15 20:59:29] No cvmfs_config command found, will try listing directly
[2024-05-15 20:59:29] CVMFS is ok
[2024-05-15 20:59:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 20:59:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 20:59:29] Further information can be found at the LHC@home message board.
[2024-05-15 20:59:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 20:59:29] Checking for apptainer binary...
[2024-05-15 20:59:29] which: no apptainer in ((null))
[2024-05-15 20:59:29] apptainer is not installed, using version from CVMFS
[2024-05-15 20:59:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 20:59:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-15 20:59:31] apptainer works
[2024-05-15 20:59:31] Set ATHENA_PROC_NUMBER=4
[2024-05-15 20:59:31] Set ATHENA_CORE_NUMBER=4
[2024-05-15 20:59:31] Starting ATLAS job with PandaID=6205835865
[2024-05-15 20:59:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 00:21:14]  *** The last 200 lines of the pilot log: ***
[2024-05-16 00:21:14] 2024-05-15 22:20:53,188 | INFO     | fitting pss+swap vs Time
[2024-05-16 00:21:14] 2024-05-15 22:20:53,188 | INFO     | model: linear, x: [1715799608.0, 1715799669.0, 1715799730.0, 1715799791.0, 1715799852.0, 1715799913.0, 1715799974.0, 1715800035.0, 1715800096.0, 1715800157.0, 1715
[2024-05-16 00:21:14] 2024-05-15 22:20:53,188 | INFO     | sum of square deviations: 2406926989.5
[2024-05-16 00:21:14] 2024-05-15 22:20:53,189 | INFO     | sum of deviations: 78877384070.0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,189 | INFO     | mean x: 1715805616.5
[2024-05-16 00:21:14] 2024-05-15 22:20:53,190 | INFO     | mean y: 2271204.909090909
[2024-05-16 00:21:14] 2024-05-15 22:20:53,190 | INFO     | -- intersect: -56226380180.25318
[2024-05-16 00:21:14] 2024-05-15 22:20:53,190 | INFO     | intersect: -56226380180.25318
[2024-05-16 00:21:14] 2024-05-15 22:20:53,190 | INFO     | chi2: 4.672854820618385
[2024-05-16 00:21:14] 2024-05-15 22:20:53,190 | INFO     | model: linear, x: [1715799608.0, 1715799669.0, 1715799730.0, 1715799791.0, 1715799852.0, 1715799913.0, 1715799974.0, 1715800035.0, 1715800096.0, 1715800157.0, 1715
[2024-05-16 00:21:14] 2024-05-15 22:20:53,190 | INFO     | sum of square deviations: 2229146912.0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,192 | INFO     | sum of deviations: 89154948817.99995
[2024-05-16 00:21:14] 2024-05-15 22:20:53,192 | INFO     | mean x: 1715805464.0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,192 | INFO     | mean y: 2279798.8082901556
[2024-05-16 00:21:14] 2024-05-15 22:20:53,192 | INFO     | -- intersect: -68621527587.36217
[2024-05-16 00:21:14] 2024-05-15 22:20:53,192 | INFO     | intersect: -68621527587.36217
[2024-05-16 00:21:14] 2024-05-15 22:20:53,192 | INFO     | chi2: 3.87623200443616
[2024-05-16 00:21:14] 2024-05-15 22:20:53,193 | INFO     | current chi2=3.87623200443616 (change=17.047882863110296 %)
[2024-05-16 00:21:14] 2024-05-15 22:20:53,193 | INFO     | right removable region: 192
[2024-05-16 00:21:14] 2024-05-15 22:20:53,193 | INFO     | model: linear, x: [1715799913.0, 1715799974.0, 1715800035.0, 1715800096.0, 1715800157.0, 1715800218.0, 1715800279.0, 1715800340.0, 1715800401.0, 1715800462.0, 1715
[2024-05-16 00:21:14] 2024-05-15 22:20:53,193 | INFO     | sum of square deviations: 2229146912.0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,194 | INFO     | sum of deviations: 33885340058.0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,194 | INFO     | mean x: 1715805769.0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,195 | INFO     | mean y: 2309681.725388601
[2024-05-16 00:21:14] 2024-05-15 22:20:53,195 | INFO     | -- intersect: -26079713734.07503
[2024-05-16 00:21:14] 2024-05-15 22:20:53,195 | INFO     | intersect: -26079713734.07503
[2024-05-16 00:21:14] 2024-05-15 22:20:53,195 | INFO     | chi2: 2.2637643658596773
[2024-05-16 00:21:14] 2024-05-15 22:20:53,195 | INFO     | current chi2=2.2637643658596773 (change=51.55500325259194 %)
[2024-05-16 00:21:14] 2024-05-15 22:20:53,195 | INFO     | model: linear, x: [1715800218.0, 1715800279.0, 1715800340.0, 1715800401.0, 1715800462.0, 1715800523.0, 1715800584.0, 1715800645.0, 1715800706.0, 1715800767.0, 1715
[2024-05-16 00:21:14] 2024-05-15 22:20:53,195 | INFO     | sum of square deviations: 2060343747.0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,197 | INFO     | sum of deviations: -1995908013.5
[2024-05-16 00:21:14] 2024-05-15 22:20:53,197 | INFO     | mean x: 1715805921.5
[2024-05-16 00:21:14] 2024-05-15 22:20:53,197 | INFO     | mean y: 2342105.2712765955
[2024-05-16 00:21:14] 2024-05-15 22:20:53,197 | INFO     | -- intersect: 1664487460.0544472
[2024-05-16 00:21:14] 2024-05-15 22:20:53,197 | INFO     | intersect: 1664487460.0544472
[2024-05-16 00:21:14] 2024-05-15 22:20:53,197 | INFO     | chi2: 0.8713130762550104
[2024-05-16 00:21:14] 2024-05-15 22:20:53,197 | INFO     | current chi2=0.8713130762550104 (change=61.510434151386406 %)
[2024-05-16 00:21:14] 2024-05-15 22:20:53,198 | INFO     | model: linear, x: [1715800523.0, 1715800584.0, 1715800645.0, 1715800706.0, 1715800767.0, 1715800828.0, 1715800889.0, 1715800950.0, 1715801011.0, 1715801072.0, 1715
[2024-05-16 00:21:14] 2024-05-15 22:20:53,198 | INFO     | sum of square deviations: 1900284932.0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,199 | INFO     | sum of deviations: -6037187812.000003
[2024-05-16 00:21:14] 2024-05-15 22:20:53,199 | INFO     | mean x: 1715806074.0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,199 | INFO     | mean y: 2345904.644808743
[2024-05-16 00:21:14] 2024-05-15 22:20:53,199 | INFO     | -- intersect: 5453446075.610314
[2024-05-16 00:21:14] 2024-05-15 22:20:53,199 | INFO     | intersect: 5453446075.610314
[2024-05-16 00:21:14] 2024-05-15 22:20:53,199 | INFO     | chi2: 0.8340577624284095
[2024-05-16 00:21:14] 2024-05-15 22:20:53,199 | INFO     | current chi2=0.8340577624284095 (change=4.275766637949241 %)
[2024-05-16 00:21:14] 2024-05-15 22:20:53,199 | INFO     | left removable region: 30
[2024-05-16 00:21:14] 2024-05-15 22:20:53,200 | INFO     | model: linear, x: [1715801438.0, 1715801499.0, 1715801560.0, 1715801621.0, 1715801682.0, 1715801743.0, 1715801804.0, 1715801865.0, 1715801926.0, 1715801987.0, 1715
[2024-05-16 00:21:14] 2024-05-15 22:20:53,200 | INFO     | sum of square deviations: 1318277740.5
[2024-05-16 00:21:14] 2024-05-15 22:20:53,200 | INFO     | sum of deviations: 2951982180.5
[2024-05-16 00:21:14] 2024-05-15 22:20:53,200 | INFO     | mean x: 1715806348.5
[2024-05-16 00:21:14] 2024-05-15 22:20:53,200 | INFO     | mean y: 2360133.277777778
[2024-05-16 00:21:14] 2024-05-15 22:20:53,200 | INFO     | -- intersect: -3839796652.317111
[2024-05-16 00:21:14] 2024-05-15 22:20:53,200 | INFO     | intersect: -3839796652.317111
[2024-05-16 00:21:14] 2024-05-15 22:20:53,200 | INFO     | chi2: 0.0004687025905745566
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | -- intersect: -3839796652.317111
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | current memory leak: 2.24 B/s (using 162 data points, chi2=0.00)
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | ..............................
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | . Timing measurements:
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | . get job = 0 s
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | . initial setup = 1 s
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | . payload setup = 6 s
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | . stage-in = 0 s
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | . payload execution = 12040 s
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | . stage-out = 0 s
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | . log creation = 0 s
[2024-05-16 00:21:14] 2024-05-15 22:20:53,201 | INFO     | ..............................
[2024-05-16 00:21:14] 2024-05-15 22:20:53,389 | WARNING  | process 2427403 is no longer using CPU - aborting
[2024-05-16 00:21:14] 2024-05-15 22:20:53,389 | INFO     | aborting job monitoring since job object (job id=6205835865) has expired
[2024-05-16 00:21:14] 2024-05-15 22:20:53,414 | INFO     | 
[2024-05-16 00:21:14] 2024-05-15 22:20:53,415 | INFO     | job summary report
[2024-05-16 00:21:14] 2024-05-15 22:20:53,415 | INFO     | --------------------------------------------------
[2024-05-16 00:21:14] 2024-05-15 22:20:53,415 | INFO     | PanDA job id: 6205835865
[2024-05-16 00:21:14] 2024-05-15 22:20:53,415 | INFO     | task id: 38776125
[2024-05-16 00:21:14] 2024-05-15 22:20:53,415 | INFO     | errors: (none)
[2024-05-16 00:21:14] 2024-05-15 22:20:53,415 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 00:21:14] 2024-05-15 22:20:53,415 | INFO     | pilot state: finished 
[2024-05-16 00:21:14] 2024-05-15 22:20:53,415 | INFO     | transexitcode: 0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,415 | INFO     | exeerrorcode: 0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | exeerrordiag: 
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | exitcode: 0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | exitmsg: OK
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | cpuconsumptiontime: 45394 s
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | nevents: 400
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | neventsw: 0
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | pid: 2427403
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | pgrp: 2427403
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | corecount: 4
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | event service: False
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | sizes: {0: 2390685, 1: 2392232, 6: 2392438, 12: 2392466, 12050: 2422085, 12052: 2431251, 12056: 2431365}
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | --------------------------------------------------
[2024-05-16 00:21:14] 2024-05-15 22:20:53,416 | INFO     | 
[2024-05-16 00:21:14] 2024-05-15 22:20:53,417 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-05-16 00:21:14] 2024-05-15 22:20:53,437 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,438 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 00:21:14] 2024-05-15 22:20:53,439 | INFO     | job 6205835865 has completed (purged errors)
[2024-05-16 00:21:14] 2024-05-15 22:20:53,439 | INFO     | overall cleanup function is called
[2024-05-16 00:21:14] 2024-05-15 22:20:54,445 | INFO     | --- collectZombieJob: --- 10, [2427403]
[2024-05-16 00:21:14] 2024-05-15 22:20:54,445 | INFO     | zombie collector waiting for pid 2427403
[2024-05-16 00:21:14] 2024-05-15 22:20:54,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 00:21:14] 2024-05-15 22:20:55,450 | INFO     | collected zombie processes
[2024-05-16 00:21:14] 2024-05-15 22:20:55,450 | INFO     | will now attempt to kill all subprocesses of pid=2427403
[2024-05-16 00:21:14] 2024-05-15 22:20:55,659 | INFO     | process IDs to be killed: [2427403] (in reverse order)
[2024-05-16 00:21:14] 2024-05-15 22:20:55,833 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 00:21:14] 2024-05-15 22:20:55,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 00:21:14] 2024-05-15 22:20:55,846 | INFO     | did not find any defunct processes belonging to 2427403
[2024-05-16 00:21:14] 2024-05-15 22:20:55,856 | INFO     | did not find any defunct processes belonging to 2427403
[2024-05-16 00:21:14] 2024-05-15 22:20:55,856 | INFO     | ready for new job
[2024-05-16 00:21:14] 2024-05-15 22:20:55,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 00:21:14] 2024-05-15 22:20:55,857 | INFO     | *************************************
[2024-05-16 00:21:14] 2024-05-15 22:20:55,858 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 00:21:14] 2024-05-15 22:20:55,858 | INFO     | *************************************
[2024-05-16 00:21:14] 2024-05-15 22:20:55,858 | INFO     | 
[2024-05-16 00:21:14] 2024-05-15 22:20:55,863 | INFO     | architecture information:
[2024-05-16 00:21:14] 2024-05-15 22:20:55,863 | INFO     | executing command: cat /etc/os-release
[2024-05-16 00:21:14] 2024-05-15 22:20:55,876 | INFO     | cat /etc/os-release:
[2024-05-16 00:21:14] NAME="CentOS Linux"
[2024-05-16 00:21:14] VERSION="7 (Core)"
[2024-05-16 00:21:14] ID="centos"
[2024-05-16 00:21:14] ID_LIKE="rhel fedora"
[2024-05-16 00:21:14] VERSION_ID="7"
[2024-05-16 00:21:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 00:21:14] ANSI_COLOR="0;31"
[2024-05-16 00:21:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 00:21:14] HOME_URL="https://www.centos.org/"
[2024-05-16 00:21:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 00:21:14] 
[2024-05-16 00:21:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 00:21:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 00:21:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 00:21:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 00:21:14] 
[2024-05-16 00:21:14] 2024-05-15 22:20:55,876 | INFO     | *************************************
[2024-05-16 00:21:14] 2024-05-15 22:20:56,379 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-05-16 00:21:14] 2024-05-15 22:20:56,401 | INFO     | sufficient remaining disk space (3012954161152 B)
[2024-05-16 00:21:14] 2024-05-15 22:20:56,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 00:21:14] 2024-05-15 22:20:56,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 00:21:14] 2024-05-15 22:20:56,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 00:21:14] 2024-05-15 22:20:56,897 | INFO     | aborting loop
[2024-05-16 00:21:14] 2024-05-15 22:20:57,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 00:21:14] 2024-05-15 22:20:57,234 | INFO     | all data control threads have been joined
[2024-05-16 00:21:14] 2024-05-15 22:20:57,273 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 00:21:14] 2024-05-15 22:20:57,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 00:21:14] 2024-05-15 22:20:57,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 00:21:14] 2024-05-15 22:20:57,407 | INFO     | [job] retrieve thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:57,488 | INFO     | all payload control threads have been joined
[2024-05-16 00:21:14] 2024-05-15 22:20:57,623 | INFO     | [job] validate thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:57,665 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:57,719 | INFO     | all job control threads have been joined
[2024-05-16 00:21:14] 2024-05-15 22:20:57,751 | INFO     | [payload] validate_post thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:57,760 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:57,902 | INFO     | [job] job monitor thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:57,940 | INFO     | [payload] failed_post thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:58,239 | INFO     | [data] control thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:58,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 00:21:14] 2024-05-15 22:20:58,369 | INFO     | [data] copytool_in thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:58,493 | INFO     | [payload] control thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:58,580 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:58,724 | INFO     | [job] control thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:59,087 | INFO     | [data] copytool_out thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:59,278 | INFO     | [job] queue monitor thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:20:59,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 00:21:14] 2024-05-15 22:21:03,645 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:21:06,662 | INFO     | job.realtimelogging is not enabled
[2024-05-16 00:21:14] 2024-05-15 22:21:07,667 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 00:21:14] 2024-05-15 22:21:08,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47268988949568)>', '<ExcThread(monitor, started 47269160199936)>']
[2024-05-16 00:21:14] 2024-05-15 22:21:08,328 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 00:21:14] 2024-05-15 22:21:08,328 | INFO     | [monitor] control thread has ended
[2024-05-16 00:21:14] 2024-05-15 22:21:13,118 | INFO     | all workflow threads have been joined
[2024-05-16 00:21:14] 2024-05-15 22:21:13,118 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 00:21:14] 2024-05-15 22:21:13,118 | INFO     | traces error code: 0
[2024-05-16 00:21:14] 2024-05-15 22:21:13,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 00:21:14] 2024-05-15 22:21:13,192 [wrapper] ==== pilot stdout END ====
[2024-05-16 00:21:14] 2024-05-15 22:21:13,194 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 00:21:14] 2024-05-15 22:21:13,196 [wrapper] pilotpid: 2419306
[2024-05-16 00:21:14] 2024-05-15 22:21:13,198 [wrapper] Pilot exit status: 0
[2024-05-16 00:21:14] 2024-05-15 22:21:13,206 [wrapper] pandaids: 6205835865
[2024-05-16 00:21:14] 2024-05-15 22:21:13,307 [wrapper] cleanup: SIGTERM to supervisor_pilot 3464957 2419307
[2024-05-16 00:21:14] 2024-05-15 22:21:13,310 [wrapper] Test setup, not cleaning
[2024-05-16 00:21:14] 2024-05-15 22:21:13,311 [wrapper] ==== wrapper stdout END ====
[2024-05-16 00:21:14] 2024-05-15 22:21:13,313 [wrapper] ==== wrapper stderr END ====
[2024-05-16 00:21:14] 2024-05-15 22:21:13,317 [wrapper] apfmon messages muted
[2024-05-16 00:21:14]  *** Error codes and diagnostics ***
[2024-05-16 00:21:14]     "exeErrorCode": 0,
[2024-05-16 00:21:14]     "exeErrorDiag": "",
[2024-05-16 00:21:14]     "pilotErrorCode": 0,
[2024-05-16 00:21:14]     "pilotErrorDiag": "",
[2024-05-16 00:21:14]  *** Listing of results directory ***
[2024-05-16 00:21:14] total 835252
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc    467845 May 13 14:56 pilot3.tar.gz
[2024-05-16 00:21:14] -rwx------ 1 boinc boinc     32251 May 13 15:08 runpilot2-wrapper.sh
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc      5633 May 13 15:08 queuedata.json
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc       100 May 15 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 00:21:14] -rwxr-xr-x 1 boinc boinc      7986 May 15 20:59 run_atlas
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc       105 May 15 20:59 job.xml
[2024-05-16 00:21:14] -rw-r--r-- 2 boinc boinc 604968521 May 15 20:59 EVNT.38776119._000226.pool.root.1
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc      6644 May 15 20:59 init_data.xml
[2024-05-16 00:21:14] drwxrwx--x 2 boinc boinc      4096 May 15 20:59 shared
[2024-05-16 00:21:14] -rw-r--r-- 2 boinc boinc    480004 May 15 20:59 input.tar.gz
[2024-05-16 00:21:14] -rw-r--r-- 2 boinc boinc     17537 May 15 20:59 start_atlas.sh
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc         0 May 15 20:59 boinc_lockfile
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc      2632 May 15 20:59 pandaJob.out
[2024-05-16 00:21:14] -rw------- 1 boinc boinc       424 May 15 20:59 setup.sh.local
[2024-05-16 00:21:14] -rw------- 1 boinc boinc   1011265 May 15 20:59 agis_schedconf.cvmfs.json
[2024-05-16 00:21:14] -rw------- 1 boinc boinc   1324701 May 15 20:59 cric_ddmendpoints.json
[2024-05-16 00:21:14] drwx------ 4 boinc boinc      4096 May 15 20:59 pilot3
[2024-05-16 00:21:14] -rw------- 1 boinc boinc 243608625 May 16 00:20 HITS.38776125._005560.pool.root.1
[2024-05-16 00:21:14] -rw------- 1 boinc boinc        95 May 16 00:20 pilot_heartbeat.json
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc       531 May 16 00:20 boinc_task_state.xml
[2024-05-16 00:21:14] -rw------- 1 boinc boinc      1043 May 16 00:20 memory_monitor_summary.json
[2024-05-16 00:21:14] -rw------- 1 boinc boinc         0 May 16 00:20 agis_ddmendpoints.agis.ALL.json
[2024-05-16 00:21:14] -rw------- 1 boinc boinc    323976 May 16 00:20 log.38776125._005560.job.log.tgz.1
[2024-05-16 00:21:14] -rw------- 1 boinc boinc      7718 May 16 00:20 heartbeat.json
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc      8192 May 16 00:21 boinc_mmap_file
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc        28 May 16 00:21 wrapper_checkpoint.txt
[2024-05-16 00:21:14] -rw------- 1 boinc boinc      4294 May 16 00:21 pilotlog.txt
[2024-05-16 00:21:14] -rw------- 1 boinc boinc   1270837 May 16 00:21 log.38776125._005560.job.log.1
[2024-05-16 00:21:14] -rw------- 1 boinc boinc       357 May 16 00:21 output.list
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc       620 May 16 00:21 runtime_log
[2024-05-16 00:21:14] -rw------- 1 boinc boinc   1617920 May 16 00:21 result.tar.gz
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc     11410 May 16 00:21 runtime_log.err
[2024-05-16 00:21:14] -rw------- 1 boinc boinc       658 May 16 00:21 2qjKDmWakQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmrkKKDmoNtton.diag
[2024-05-16 00:21:14] -rw-r--r-- 1 boinc boinc     21303 May 16 00:21 stderr.txt
[2024-05-16 00:21:14] HITS file was successfully produced:
[2024-05-16 00:21:14] -rw------- 1 boinc boinc 243608625 May 16 00:20 shared/HITS.pool.root.1
[2024-05-16 00:21:14]  *** Contents of shared directory: ***
[2024-05-16 00:21:14] total 830772
[2024-05-16 00:21:14] -rw-r--r-- 2 boinc boinc 604968521 May 15 20:59 ATLAS.root_0
[2024-05-16 00:21:14] -rw-r--r-- 2 boinc boinc    480004 May 15 20:59 input.tar.gz
[2024-05-16 00:21:14] -rw-r--r-- 2 boinc boinc     17537 May 15 20:59 start_atlas.sh
[2024-05-16 00:21:14] -rw------- 1 boinc boinc 243608625 May 16 00:20 HITS.pool.root.1
[2024-05-16 00:21:14] -rw------- 1 boinc boinc   1617920 May 16 00:21 result.tar.gz
00:21:16 (2414581): run_atlas exited; CPU time 45116.872313
00:21:16 (2414581): called boinc_finish(0)

</stderr_txt>
]]>

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