Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:10:45 (2830050): wrapper (7.7.26015): starting
02:10:45 (2830050): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 02:10:45] Arguments: --nthreads 4
[2024-05-16 02:10:45] Threads: 4
[2024-05-16 02:10:45] Checking for CVMFS
[2024-05-16 02:10:45] No cvmfs_config command found, will try listing directly
[2024-05-16 02:10:45] CVMFS is ok
[2024-05-16 02:10:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 02:10:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 02:10:45] Further information can be found at the LHC@home message board.
[2024-05-16 02:10:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 02:10:45] Checking for apptainer binary...
[2024-05-16 02:10:45] which: no apptainer in ((null))
[2024-05-16 02:10:45] apptainer is not installed, using version from CVMFS
[2024-05-16 02:10:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 02:10:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-16 02:10:46] apptainer works
[2024-05-16 02:10:46] Set ATHENA_PROC_NUMBER=4
[2024-05-16 02:10:46] Set ATHENA_CORE_NUMBER=4
[2024-05-16 02:10:46] Starting ATLAS job with PandaID=6205835840
[2024-05-16 02:10:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 05:39:49]  *** The last 200 lines of the pilot log: ***
[2024-05-16 05:39:49] 2024-05-16 03:39:32,479 | INFO     | intersect: -37078522313.46278
[2024-05-16 05:39:49] 2024-05-16 03:39:32,480 | INFO     | chi2: 1.674603877318869
[2024-05-16 05:39:49] 2024-05-16 03:39:32,480 | INFO     | current chi2=1.674603877318869 (change=60.64558533797181 %)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,480 | INFO     | model: linear, x: [1715818891.0, 1715818952.0, 1715819013.0, 1715819074.0, 1715819135.0, 1715819196.0, 1715819257.0, 1715819318.0, 1715819379.0, 1715819440.0, 1715
[2024-05-16 05:39:49] 2024-05-16 03:39:32,480 | INFO     | sum of square deviations: 2299168690.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,481 | INFO     | sum of deviations: 13727936418.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,481 | INFO     | mean x: 1715824808.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,482 | INFO     | mean y: 2344737.902564103
[2024-05-16 05:39:49] 2024-05-16 03:39:32,482 | INFO     | -- intersect: -10242546805.332159
[2024-05-16 05:39:49] 2024-05-16 03:39:32,482 | INFO     | intersect: -10242546805.332159
[2024-05-16 05:39:49] 2024-05-16 03:39:32,482 | INFO     | chi2: 0.06484847999033717
[2024-05-16 05:39:49] 2024-05-16 03:39:32,482 | INFO     | current chi2=0.06484847999033717 (change=96.12753315165116 %)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,482 | INFO     | model: linear, x: [1715819196.0, 1715819257.0, 1715819318.0, 1715819379.0, 1715819440.0, 1715819501.0, 1715819562.0, 1715819623.0, 1715819684.0, 1715819745.0, 1715
[2024-05-16 05:39:49] 2024-05-16 03:39:32,483 | INFO     | sum of square deviations: 2126802667.5
[2024-05-16 05:39:49] 2024-05-16 03:39:32,484 | INFO     | sum of deviations: 7115349209.000016
[2024-05-16 05:39:49] 2024-05-16 03:39:32,484 | INFO     | mean x: 1715824960.5
[2024-05-16 05:39:49] 2024-05-16 03:39:32,484 | INFO     | mean y: 2350530.0315789473
[2024-05-16 05:39:49] 2024-05-16 03:39:32,484 | INFO     | -- intersect: -5738047468.353083
[2024-05-16 05:39:49] 2024-05-16 03:39:32,484 | INFO     | intersect: -5738047468.353083
[2024-05-16 05:39:49] 2024-05-16 03:39:32,484 | INFO     | chi2: 0.0013588055999755775
[2024-05-16 05:39:49] 2024-05-16 03:39:32,485 | INFO     | current chi2=0.0013588055999755775 (change=97.90464541315687 %)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,485 | INFO     | model: linear, x: [1715819501.0, 1715819562.0, 1715819623.0, 1715819684.0, 1715819745.0, 1715819806.0, 1715819867.0, 1715819928.0, 1715819989.0, 1715820050.0, 1715
[2024-05-16 05:39:49] 2024-05-16 03:39:32,485 | INFO     | sum of square deviations: 1963274020.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,486 | INFO     | sum of deviations: 5733321740.999999
[2024-05-16 05:39:49] 2024-05-16 03:39:32,486 | INFO     | mean x: 1715825113.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,486 | INFO     | mean y: 2351816.275675676
[2024-05-16 05:39:49] 2024-05-16 03:39:32,486 | INFO     | -- intersect: -5008348332.507773
[2024-05-16 05:39:49] 2024-05-16 03:39:32,487 | INFO     | intersect: -5008348332.507773
[2024-05-16 05:39:49] 2024-05-16 03:39:32,487 | INFO     | chi2: 0.0004664037007077189
[2024-05-16 05:39:49] 2024-05-16 03:39:32,487 | INFO     | current chi2=0.0004664037007077189 (change=65.67546522356828 %)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,487 | INFO     | model: linear, x: [1715819806.0, 1715819867.0, 1715819928.0, 1715819989.0, 1715820050.0, 1715820111.0, 1715820172.0, 1715820233.0, 1715820294.0, 1715820355.0, 1715
[2024-05-16 05:39:49] 2024-05-16 03:39:32,487 | INFO     | sum of square deviations: 1808350185.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,488 | INFO     | sum of deviations: 4935933462.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,489 | INFO     | mean x: 1715825265.5
[2024-05-16 05:39:49] 2024-05-16 03:39:32,489 | INFO     | mean y: 2352598.933333333
[2024-05-16 05:39:49] 2024-05-16 03:39:32,489 | INFO     | -- intersect: -4681031965.172255
[2024-05-16 05:39:49] 2024-05-16 03:39:32,489 | INFO     | intersect: -4681031965.172255
[2024-05-16 05:39:49] 2024-05-16 03:39:32,489 | INFO     | chi2: 0.00028634859382917145
[2024-05-16 05:39:49] 2024-05-16 03:39:32,489 | INFO     | current chi2=0.00028634859382917145 (change=38.6049910421664 %)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,490 | INFO     | model: linear, x: [1715820111.0, 1715820172.0, 1715820233.0, 1715820294.0, 1715820355.0, 1715820416.0, 1715820477.0, 1715820538.0, 1715820599.0, 1715820660.0, 1715
[2024-05-16 05:39:49] 2024-05-16 03:39:32,490 | INFO     | sum of square deviations: 1661798600.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,491 | INFO     | sum of deviations: 4401168055.999999
[2024-05-16 05:39:49] 2024-05-16 03:39:32,491 | INFO     | mean x: 1715825418.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,491 | INFO     | mean y: 2353154.834285714
[2024-05-16 05:39:49] 2024-05-16 03:39:32,491 | INFO     | -- intersect: -4541901497.54925
[2024-05-16 05:39:49] 2024-05-16 03:39:32,491 | INFO     | intersect: -4541901497.54925
[2024-05-16 05:39:49] 2024-05-16 03:39:32,491 | INFO     | chi2: 0.00025919357630677613
[2024-05-16 05:39:49] 2024-05-16 03:39:32,492 | INFO     | current chi2=0.00025919357630677613 (change=9.48320267938712 %)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,492 | INFO     | left removable region: 60
[2024-05-16 05:39:49] 2024-05-16 03:39:32,492 | INFO     | model: linear, x: [1715821941.0, 1715822002.0, 1715822063.0, 1715822124.0, 1715822185.0, 1715822246.0, 1715822307.0, 1715822368.0, 1715822429.0, 1715822490.0, 1715
[2024-05-16 05:39:49] 2024-05-16 03:39:32,492 | INFO     | sum of square deviations: 832722590.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,493 | INFO     | sum of deviations: 2231576725.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,493 | INFO     | mean x: 1715826150.0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,493 | INFO     | mean y: 2355377.5971223023
[2024-05-16 05:39:49] 2024-05-16 03:39:32,493 | INFO     | -- intersect: -4595811822.942447
[2024-05-16 05:39:49] 2024-05-16 03:39:32,493 | INFO     | intersect: -4595811822.942447
[2024-05-16 05:39:49] 2024-05-16 03:39:32,493 | INFO     | chi2: 0.00018392688611143027
[2024-05-16 05:39:49] 2024-05-16 03:39:32,494 | INFO     | -- intersect: -4595811822.942447
[2024-05-16 05:39:49] 2024-05-16 03:39:32,494 | INFO     | current memory leak: 2.68 B/s (using 139 data points, chi2=0.00)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,494 | INFO     | ..............................
[2024-05-16 05:39:49] 2024-05-16 03:39:32,494 | INFO     | . Timing measurements:
[2024-05-16 05:39:49] 2024-05-16 03:39:32,495 | INFO     | . get job = 0 s
[2024-05-16 05:39:49] 2024-05-16 03:39:32,495 | INFO     | . initial setup = 1 s
[2024-05-16 05:39:49] 2024-05-16 03:39:32,495 | INFO     | . payload setup = 5 s
[2024-05-16 05:39:49] 2024-05-16 03:39:32,495 | INFO     | . stage-in = 0 s
[2024-05-16 05:39:49] 2024-05-16 03:39:32,495 | INFO     | . payload execution = 12480 s
[2024-05-16 05:39:49] 2024-05-16 03:39:32,495 | INFO     | . stage-out = 1 s
[2024-05-16 05:39:49] 2024-05-16 03:39:32,495 | INFO     | . log creation = 0 s
[2024-05-16 05:39:49] 2024-05-16 03:39:32,495 | INFO     | ..............................
[2024-05-16 05:39:49] 2024-05-16 03:39:32,596 | INFO     | 
[2024-05-16 05:39:49] 2024-05-16 03:39:32,596 | INFO     | job summary report
[2024-05-16 05:39:49] 2024-05-16 03:39:32,596 | INFO     | --------------------------------------------------
[2024-05-16 05:39:49] 2024-05-16 03:39:32,596 | INFO     | PanDA job id: 6205835840
[2024-05-16 05:39:49] 2024-05-16 03:39:32,596 | INFO     | task id: 38776125
[2024-05-16 05:39:49] 2024-05-16 03:39:32,596 | INFO     | errors: (none)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,596 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | pilot state: finished 
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | transexitcode: 0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | exeerrorcode: 0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | exeerrordiag: 
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | exitcode: 0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | exitmsg: OK
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | cpuconsumptiontime: 46816 s
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | nevents: 400
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | neventsw: 0
[2024-05-16 05:39:49] 2024-05-16 03:39:32,597 | INFO     | pid: 2842273
[2024-05-16 05:39:49] 2024-05-16 03:39:32,598 | INFO     | pgrp: 2842273
[2024-05-16 05:39:49] 2024-05-16 03:39:32,598 | INFO     | corecount: 4
[2024-05-16 05:39:49] 2024-05-16 03:39:32,598 | INFO     | event service: False
[2024-05-16 05:39:49] 2024-05-16 03:39:32,598 | INFO     | sizes: {0: 2392204, 4: 2392410, 11: 2392438, 12489: 2422085, 12490: 2431067, 12492: 2431123, 12502: 2431421}
[2024-05-16 05:39:49] 2024-05-16 03:39:32,598 | INFO     | --------------------------------------------------
[2024-05-16 05:39:49] 2024-05-16 03:39:32,598 | INFO     | 
[2024-05-16 05:39:49] 2024-05-16 03:39:32,598 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-05-16 05:39:49] 2024-05-16 03:39:32,620 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,620 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,620 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,620 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | job 6205835840 has completed (purged errors)
[2024-05-16 05:39:49] 2024-05-16 03:39:32,621 | INFO     | overall cleanup function is called
[2024-05-16 05:39:49] 2024-05-16 03:39:33,629 | INFO     | --- collectZombieJob: --- 10, [2842273]
[2024-05-16 05:39:49] 2024-05-16 03:39:33,629 | INFO     | zombie collector waiting for pid 2842273
[2024-05-16 05:39:49] 2024-05-16 03:39:33,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 05:39:49] 2024-05-16 03:39:34,633 | INFO     | collected zombie processes
[2024-05-16 05:39:49] 2024-05-16 03:39:34,634 | INFO     | will now attempt to kill all subprocesses of pid=2842273
[2024-05-16 05:39:49] 2024-05-16 03:39:34,942 | INFO     | process IDs to be killed: [2842273] (in reverse order)
[2024-05-16 05:39:49] 2024-05-16 03:39:35,209 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 05:39:49] 2024-05-16 03:39:35,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 05:39:49] 2024-05-16 03:39:35,226 | INFO     | did not find any defunct processes belonging to 2842273
[2024-05-16 05:39:49] 2024-05-16 03:39:35,238 | INFO     | did not find any defunct processes belonging to 2842273
[2024-05-16 05:39:49] 2024-05-16 03:39:35,238 | INFO     | ready for new job
[2024-05-16 05:39:49] 2024-05-16 03:39:35,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 05:39:49] 2024-05-16 03:39:35,240 | INFO     | *************************************
[2024-05-16 05:39:49] 2024-05-16 03:39:35,240 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 05:39:49] 2024-05-16 03:39:35,240 | INFO     | *************************************
[2024-05-16 05:39:49] 2024-05-16 03:39:35,240 | INFO     | 
[2024-05-16 05:39:49] 2024-05-16 03:39:35,245 | INFO     | architecture information:
[2024-05-16 05:39:49] 2024-05-16 03:39:35,245 | INFO     | executing command: cat /etc/os-release
[2024-05-16 05:39:49] 2024-05-16 03:39:35,268 | INFO     | cat /etc/os-release:
[2024-05-16 05:39:49] NAME="CentOS Linux"
[2024-05-16 05:39:49] VERSION="7 (Core)"
[2024-05-16 05:39:49] ID="centos"
[2024-05-16 05:39:49] ID_LIKE="rhel fedora"
[2024-05-16 05:39:49] VERSION_ID="7"
[2024-05-16 05:39:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 05:39:49] ANSI_COLOR="0;31"
[2024-05-16 05:39:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 05:39:49] HOME_URL="https://www.centos.org/"
[2024-05-16 05:39:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 05:39:49] 
[2024-05-16 05:39:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 05:39:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 05:39:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 05:39:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 05:39:49] 
[2024-05-16 05:39:49] 2024-05-16 03:39:35,269 | INFO     | *************************************
[2024-05-16 05:39:49] 2024-05-16 03:39:35,772 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-05-16 05:39:49] 2024-05-16 03:39:35,795 | INFO     | sufficient remaining disk space (2994888245248 B)
[2024-05-16 05:39:49] 2024-05-16 03:39:35,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 05:39:49] 2024-05-16 03:39:35,796 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 05:39:49] 2024-05-16 03:39:35,796 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 05:39:49] 2024-05-16 03:39:35,797 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 05:39:49] 2024-05-16 03:39:35,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 05:39:49] 2024-05-16 03:39:35,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 05:39:49] 2024-05-16 03:39:36,298 | INFO     | all job control threads have been joined
[2024-05-16 05:39:49] 2024-05-16 03:39:36,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 05:39:49] 2024-05-16 03:39:36,302 | INFO     | aborting loop
[2024-05-16 05:39:49] 2024-05-16 03:39:36,386 | INFO     | all data control threads have been joined
[2024-05-16 05:39:49] 2024-05-16 03:39:36,801 | INFO     | [job] retrieve thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:36,989 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:37,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 05:39:49] 2024-05-16 03:39:37,119 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:37,161 | INFO     | all payload control threads have been joined
[2024-05-16 05:39:49] 2024-05-16 03:39:37,303 | INFO     | [job] control thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:37,306 | INFO     | [job] job monitor thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:37,391 | INFO     | [data] control thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:37,488 | INFO     | [payload] validate_post thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:37,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 05:39:49] 2024-05-16 03:39:37,847 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:38,090 | INFO     | [data] copytool_in thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:38,096 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:38,106 | INFO     | [job] validate thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:38,108 | INFO     | [payload] failed_post thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:38,166 | INFO     | [payload] control thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:38,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 05:39:49] 2024-05-16 03:39:38,610 | INFO     | [job] queue monitor thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:39,068 | INFO     | [data] copytool_out thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:42,389 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 05:39:49] 2024-05-16 03:39:42,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47301134951488)>', '<ExcThread(monitor, started 47301310404352)>']
[2024-05-16 05:39:49] 2024-05-16 03:39:42,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 05:39:49] 2024-05-16 03:39:42,833 | INFO     | [monitor] control thread has ended
[2024-05-16 05:39:49] 2024-05-16 03:39:47,847 | INFO     | all workflow threads have been joined
[2024-05-16 05:39:49] 2024-05-16 03:39:47,848 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 05:39:49] 2024-05-16 03:39:47,848 | INFO     | traces error code: 0
[2024-05-16 05:39:49] 2024-05-16 03:39:47,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 05:39:49] 2024-05-16 03:39:47,980 [wrapper] ==== pilot stdout END ====
[2024-05-16 05:39:49] 2024-05-16 03:39:47,983 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 05:39:49] 2024-05-16 03:39:47,986 [wrapper] pilotpid: 2834663
[2024-05-16 05:39:49] 2024-05-16 03:39:47,990 [wrapper] Pilot exit status: 0
[2024-05-16 05:39:49] 2024-05-16 03:39:48,006 [wrapper] pandaids: 6205835840
[2024-05-16 05:39:49] 2024-05-16 03:39:48,139 [wrapper] cleanup: SIGTERM to supervisor_pilot 3842471 2834664
[2024-05-16 05:39:49] 2024-05-16 03:39:48,141 [wrapper] Test setup, not cleaning
[2024-05-16 05:39:49] 2024-05-16 03:39:48,143 [wrapper] ==== wrapper stdout END ====
[2024-05-16 05:39:49] 2024-05-16 03:39:48,146 [wrapper] ==== wrapper stderr END ====
[2024-05-16 05:39:49] 2024-05-16 03:39:48,153 [wrapper] apfmon messages muted
[2024-05-16 05:39:49]  *** Error codes and diagnostics ***
[2024-05-16 05:39:49]     "exeErrorCode": 0,
[2024-05-16 05:39:49]     "exeErrorDiag": "",
[2024-05-16 05:39:49]     "pilotErrorCode": 0,
[2024-05-16 05:39:49]     "pilotErrorDiag": "",
[2024-05-16 05:39:49]  *** Listing of results directory ***
[2024-05-16 05:39:49] total 835248
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc    467845 May 13 14:56 pilot3.tar.gz
[2024-05-16 05:39:49] -rwx------ 1 boinc boinc     32251 May 13 15:04 runpilot2-wrapper.sh
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc      5633 May 13 15:04 queuedata.json
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc       100 May 16 02:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 05:39:49] -rwxr-xr-x 1 boinc boinc      7986 May 16 02:10 run_atlas
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc       105 May 16 02:10 job.xml
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc      6644 May 16 02:10 init_data.xml
[2024-05-16 05:39:49] -rw-r--r-- 2 boinc boinc 599516975 May 16 02:10 EVNT.38776119._000225.pool.root.1
[2024-05-16 05:39:49] drwxrwx--x 2 boinc boinc      4096 May 16 02:10 shared
[2024-05-16 05:39:49] -rw-r--r-- 2 boinc boinc    480003 May 16 02:10 input.tar.gz
[2024-05-16 05:39:49] -rw-r--r-- 2 boinc boinc     17537 May 16 02:10 start_atlas.sh
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc         0 May 16 02:10 boinc_lockfile
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc      2632 May 16 02:10 pandaJob.out
[2024-05-16 05:39:49] -rw------- 1 boinc boinc       424 May 16 02:10 setup.sh.local
[2024-05-16 05:39:49] -rw------- 1 boinc boinc   1011347 May 16 02:10 agis_schedconf.cvmfs.json
[2024-05-16 05:39:49] -rw------- 1 boinc boinc   1324701 May 16 02:10 cric_ddmendpoints.json
[2024-05-16 05:39:49] drwx------ 4 boinc boinc      4096 May 16 02:10 pilot3
[2024-05-16 05:39:49] -rw------- 1 boinc boinc        95 May 16 05:38 pilot_heartbeat.json
[2024-05-16 05:39:49] -rw------- 1 boinc boinc 248973059 May 16 05:38 HITS.38776125._005535.pool.root.1
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc       531 May 16 05:38 boinc_task_state.xml
[2024-05-16 05:39:49] -rw------- 1 boinc boinc      1041 May 16 05:39 memory_monitor_summary.json
[2024-05-16 05:39:49] -rw------- 1 boinc boinc         0 May 16 05:39 agis_ddmendpoints.agis.ALL.json
[2024-05-16 05:39:49] -rw------- 1 boinc boinc    328390 May 16 05:39 log.38776125._005535.job.log.tgz.1
[2024-05-16 05:39:49] -rw------- 1 boinc boinc      7718 May 16 05:39 heartbeat.json
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc      8192 May 16 05:39 boinc_mmap_file
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc        28 May 16 05:39 wrapper_checkpoint.txt
[2024-05-16 05:39:49] -rw------- 1 boinc boinc      4345 May 16 05:39 pilotlog.txt
[2024-05-16 05:39:49] -rw------- 1 boinc boinc   1307671 May 16 05:39 log.38776125._005535.job.log.1
[2024-05-16 05:39:49] -rw------- 1 boinc boinc       357 May 16 05:39 output.list
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc       620 May 16 05:39 runtime_log
[2024-05-16 05:39:49] -rw------- 1 boinc boinc   1658880 May 16 05:39 result.tar.gz
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc     11410 May 16 05:39 runtime_log.err
[2024-05-16 05:39:49] -rw------- 1 boinc boinc       657 May 16 05:39 3lLNDmeWkQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm30GKDm0iDIUn.diag
[2024-05-16 05:39:49] -rw-r--r-- 1 boinc boinc     21392 May 16 05:39 stderr.txt
[2024-05-16 05:39:49] HITS file was successfully produced:
[2024-05-16 05:39:49] -rw------- 1 boinc boinc 248973059 May 16 05:38 shared/HITS.pool.root.1
[2024-05-16 05:39:49]  *** Contents of shared directory: ***
[2024-05-16 05:39:49] total 830728
[2024-05-16 05:39:49] -rw-r--r-- 2 boinc boinc 599516975 May 16 02:10 ATLAS.root_0
[2024-05-16 05:39:49] -rw-r--r-- 2 boinc boinc    480003 May 16 02:10 input.tar.gz
[2024-05-16 05:39:49] -rw-r--r-- 2 boinc boinc     17537 May 16 02:10 start_atlas.sh
[2024-05-16 05:39:49] -rw------- 1 boinc boinc 248973059 May 16 05:38 HITS.pool.root.1
[2024-05-16 05:39:49] -rw------- 1 boinc boinc   1658880 May 16 05:39 result.tar.gz
05:39:50 (2830050): run_atlas exited; CPU time 46507.048646
05:39:50 (2830050): called boinc_finish(0)

</stderr_txt>
]]>

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