Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:37:34 (1534947): wrapper (7.7.26015): starting
01:37:34 (1534947): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 01:37:34] Arguments: --nthreads 4
[2024-05-16 01:37:34] Threads: 4
[2024-05-16 01:37:34] Checking for CVMFS
[2024-05-16 01:37:34] No cvmfs_config command found, will try listing directly
[2024-05-16 01:37:34] CVMFS is ok
[2024-05-16 01:37:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 01:37:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 01:37:34] Further information can be found at the LHC@home message board.
[2024-05-16 01:37:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 01:37:34] Checking for apptainer binary...
[2024-05-16 01:37:34] which: no apptainer in ((null))
[2024-05-16 01:37:34] apptainer is not installed, using version from CVMFS
[2024-05-16 01:37:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 01:37:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-16 01:37:35] apptainer works
[2024-05-16 01:37:35] Set ATHENA_PROC_NUMBER=4
[2024-05-16 01:37:35] Set ATHENA_CORE_NUMBER=4
[2024-05-16 01:37:35] Starting ATLAS job with PandaID=6205835445
[2024-05-16 01:37:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 05:33:08]  *** The last 200 lines of the pilot log: ***
[2024-05-16 05:33:08] 2024-05-16 03:32:51,816 | INFO     | intersect: -37999189371.99563
[2024-05-16 05:33:08] 2024-05-16 03:32:51,816 | INFO     | chi2: 3.5138364465921175
[2024-05-16 05:33:08] 2024-05-16 03:32:51,816 | INFO     | model: linear, x: [1715816289.0, 1715816350.0, 1715816411.0, 1715816472.0, 1715816533.0, 1715816594.0, 1715816655.0, 1715816716.0, 1715816777.0, 1715816838.0, 1715
[2024-05-16 05:33:08] 2024-05-16 03:32:51,816 | INFO     | sum of square deviations: 3579276412.5
[2024-05-16 05:33:08] 2024-05-16 03:32:51,817 | INFO     | sum of deviations: 82604710197.0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,817 | INFO     | mean x: 1715823151.5
[2024-05-16 05:33:08] 2024-05-16 03:32:51,817 | INFO     | mean y: 2288322.5663716816
[2024-05-16 05:33:08] 2024-05-16 03:32:51,817 | INFO     | -- intersect: -39596518208.26641
[2024-05-16 05:33:08] 2024-05-16 03:32:51,817 | INFO     | intersect: -39596518208.26641
[2024-05-16 05:33:08] 2024-05-16 03:32:51,818 | INFO     | chi2: 3.5151612689652088
[2024-05-16 05:33:08] 2024-05-16 03:32:51,818 | INFO     | current chi2=3.5151612689652088 (change=-0.03770301757716008 %)
[2024-05-16 05:33:08] 2024-05-16 03:32:51,818 | INFO     | right removable region: 225
[2024-05-16 05:33:08] 2024-05-16 03:32:51,818 | INFO     | model: linear, x: [1715816594.0, 1715816655.0, 1715816716.0, 1715816777.0, 1715816838.0, 1715816899.0, 1715816960.0, 1715817021.0, 1715817082.0, 1715817143.0, 1715
[2024-05-16 05:33:08] 2024-05-16 03:32:51,818 | INFO     | sum of square deviations: 3579276412.5
[2024-05-16 05:33:08] 2024-05-16 03:32:51,819 | INFO     | sum of deviations: 36098421338.999985
[2024-05-16 05:33:08] 2024-05-16 03:32:51,819 | INFO     | mean x: 1715823456.5
[2024-05-16 05:33:08] 2024-05-16 03:32:51,819 | INFO     | mean y: 2319997.7522123894
[2024-05-16 05:33:08] 2024-05-16 03:32:51,819 | INFO     | -- intersect: -17302439662.54304
[2024-05-16 05:33:08] 2024-05-16 03:32:51,819 | INFO     | intersect: -17302439662.54304
[2024-05-16 05:33:08] 2024-05-16 03:32:51,819 | INFO     | chi2: 1.380599324764481
[2024-05-16 05:33:08] 2024-05-16 03:32:51,819 | INFO     | current chi2=1.380599324764481 (change=60.70963046377839 %)
[2024-05-16 05:33:08] 2024-05-16 03:32:51,820 | INFO     | model: linear, x: [1715816899.0, 1715816960.0, 1715817021.0, 1715817082.0, 1715817143.0, 1715817204.0, 1715817265.0, 1715817326.0, 1715817387.0, 1715817448.0, 1715
[2024-05-16 05:33:08] 2024-05-16 03:32:51,820 | INFO     | sum of square deviations: 3346927870.0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,821 | INFO     | sum of deviations: -4097348527.999996
[2024-05-16 05:33:08] 2024-05-16 03:32:51,821 | INFO     | mean x: 1715823609.0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,821 | INFO     | mean y: 2346396.5656108595
[2024-05-16 05:33:08] 2024-05-16 03:32:51,821 | INFO     | -- intersect: 2102877872.5079923
[2024-05-16 05:33:08] 2024-05-16 03:32:51,821 | INFO     | intersect: 2102877872.5079923
[2024-05-16 05:33:08] 2024-05-16 03:32:51,821 | INFO     | chi2: 0.0729277740899999
[2024-05-16 05:33:08] 2024-05-16 03:32:51,821 | INFO     | current chi2=0.0729277740899999 (change=94.71767276849562 %)
[2024-05-16 05:33:08] 2024-05-16 03:32:51,821 | INFO     | model: linear, x: [1715817204.0, 1715817265.0, 1715817326.0, 1715817387.0, 1715817448.0, 1715817509.0, 1715817570.0, 1715817631.0, 1715817692.0, 1715817753.0, 1715
[2024-05-16 05:33:08] 2024-05-16 03:32:51,821 | INFO     | sum of square deviations: 3124858590.0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,822 | INFO     | sum of deviations: -8172602063.000002
[2024-05-16 05:33:08] 2024-05-16 03:32:51,822 | INFO     | mean x: 1715823761.5
[2024-05-16 05:33:08] 2024-05-16 03:32:51,822 | INFO     | mean y: 2349143.787037037
[2024-05-16 05:33:08] 2024-05-16 03:32:51,822 | INFO     | -- intersect: 4489830547.858932
[2024-05-16 05:33:08] 2024-05-16 03:32:51,822 | INFO     | intersect: 4489830547.858932
[2024-05-16 05:33:08] 2024-05-16 03:32:51,823 | INFO     | chi2: 0.01906257608340899
[2024-05-16 05:33:08] 2024-05-16 03:32:51,823 | INFO     | current chi2=0.01906257608340899 (change=73.86102027482158 %)
[2024-05-16 05:33:08] 2024-05-16 03:32:51,823 | INFO     | model: linear, x: [1715817509.0, 1715817570.0, 1715817631.0, 1715817692.0, 1715817753.0, 1715817814.0, 1715817875.0, 1715817936.0, 1715817997.0, 1715818058.0, 1715
[2024-05-16 05:33:08] 2024-05-16 03:32:51,823 | INFO     | sum of square deviations: 2912836010.0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,824 | INFO     | sum of deviations: -6295917725.999999
[2024-05-16 05:33:08] 2024-05-16 03:32:51,824 | INFO     | mean x: 1715823914.0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,824 | INFO     | mean y: 2347785.5781990523
[2024-05-16 05:33:08] 2024-05-16 03:32:51,824 | INFO     | -- intersect: 3710996730.3731713
[2024-05-16 05:33:08] 2024-05-16 03:32:51,824 | INFO     | intersect: 3710996730.3731713
[2024-05-16 05:33:08] 2024-05-16 03:32:51,824 | INFO     | chi2: 0.016779708998576344
[2024-05-16 05:33:08] 2024-05-16 03:32:51,824 | INFO     | current chi2=0.016779708998576344 (change=11.975648384792684 %)
[2024-05-16 05:33:08] 2024-05-16 03:32:51,824 | INFO     | left removable region: 40
[2024-05-16 05:33:08] 2024-05-16 03:32:51,824 | INFO     | model: linear, x: [1715818729.0, 1715818790.0, 1715818851.0, 1715818912.0, 1715818973.0, 1715819034.0, 1715819095.0, 1715819156.0, 1715819217.0, 1715819278.0, 1715
[2024-05-16 05:33:08] 2024-05-16 03:32:51,825 | INFO     | sum of square deviations: 1963274020.0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,825 | INFO     | sum of deviations: 2121456658.0000005
[2024-05-16 05:33:08] 2024-05-16 03:32:51,825 | INFO     | mean x: 1715824341.0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,825 | INFO     | mean y: 2340561.32972973
[2024-05-16 05:33:08] 2024-05-16 03:32:51,825 | INFO     | -- intersect: -1851729189.042107
[2024-05-16 05:33:08] 2024-05-16 03:32:51,825 | INFO     | intersect: -1851729189.042107
[2024-05-16 05:33:08] 2024-05-16 03:32:51,825 | INFO     | chi2: 0.00019305009013995263
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | -- intersect: -1851729189.042107
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | current memory leak: 1.08 B/s (using 185 data points, chi2=0.00)
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | ..............................
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | . Timing measurements:
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | . get job = 0 s
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | . initial setup = 1 s
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | . payload setup = 4 s
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | . stage-in = 0 s
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | . payload execution = 14075 s
[2024-05-16 05:33:08] 2024-05-16 03:32:51,826 | INFO     | . stage-out = 1 s
[2024-05-16 05:33:08] 2024-05-16 03:32:51,827 | INFO     | . log creation = 0 s
[2024-05-16 05:33:08] 2024-05-16 03:32:51,827 | INFO     | ..............................
[2024-05-16 05:33:08] 2024-05-16 03:32:51,884 | INFO     | 
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | job summary report
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | --------------------------------------------------
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | PanDA job id: 6205835445
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | task id: 38776125
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | errors: (none)
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | pilot state: finished 
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | transexitcode: 0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | exeerrorcode: 0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | exeerrordiag: 
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | exitcode: 0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | exitmsg: OK
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | cpuconsumptiontime: 53517 s
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | nevents: 400
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | neventsw: 0
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | pid: 1546476
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | pgrp: 1546476
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | corecount: 4
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | event service: False
[2024-05-16 05:33:08] 2024-05-16 03:32:51,885 | INFO     | sizes: {0: 2392202, 4: 2392408, 11: 2392436, 14084: 2423051, 14086: 2432033, 14088: 2432089, 14093: 2432387}
[2024-05-16 05:33:08] 2024-05-16 03:32:51,886 | INFO     | --------------------------------------------------
[2024-05-16 05:33:08] 2024-05-16 03:32:51,886 | INFO     | 
[2024-05-16 05:33:08] 2024-05-16 03:32:51,886 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/1
[2024-05-16 05:33:08] 2024-05-16 03:32:51,904 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,906 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 05:33:08] 2024-05-16 03:32:51,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,906 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 05:33:08] 2024-05-16 03:32:51,906 | INFO     | job 6205835445 has completed (purged errors)
[2024-05-16 05:33:08] 2024-05-16 03:32:51,906 | INFO     | overall cleanup function is called
[2024-05-16 05:33:08] 2024-05-16 03:32:52,912 | INFO     | --- collectZombieJob: --- 10, [1546476]
[2024-05-16 05:33:08] 2024-05-16 03:32:52,913 | INFO     | zombie collector waiting for pid 1546476
[2024-05-16 05:33:08] 2024-05-16 03:32:52,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 05:33:08] 2024-05-16 03:32:53,917 | INFO     | collected zombie processes
[2024-05-16 05:33:08] 2024-05-16 03:32:53,918 | INFO     | will now attempt to kill all subprocesses of pid=1546476
[2024-05-16 05:33:08] 2024-05-16 03:32:54,101 | INFO     | process IDs to be killed: [1546476] (in reverse order)
[2024-05-16 05:33:08] 2024-05-16 03:32:54,228 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 05:33:08] 2024-05-16 03:32:54,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 05:33:08] 2024-05-16 03:32:54,237 | INFO     | did not find any defunct processes belonging to 1546476
[2024-05-16 05:33:08] 2024-05-16 03:32:54,244 | INFO     | did not find any defunct processes belonging to 1546476
[2024-05-16 05:33:08] 2024-05-16 03:32:54,244 | INFO     | ready for new job
[2024-05-16 05:33:08] 2024-05-16 03:32:54,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 05:33:08] 2024-05-16 03:32:54,246 | INFO     | *************************************
[2024-05-16 05:33:08] 2024-05-16 03:32:54,246 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 05:33:08] 2024-05-16 03:32:54,246 | INFO     | *************************************
[2024-05-16 05:33:08] 2024-05-16 03:32:54,246 | INFO     | 
[2024-05-16 05:33:08] 2024-05-16 03:32:54,249 | INFO     | architecture information:
[2024-05-16 05:33:08] 2024-05-16 03:32:54,249 | INFO     | executing command: cat /etc/os-release
[2024-05-16 05:33:08] 2024-05-16 03:32:54,265 | INFO     | cat /etc/os-release:
[2024-05-16 05:33:08] NAME="CentOS Linux"
[2024-05-16 05:33:08] VERSION="7 (Core)"
[2024-05-16 05:33:08] ID="centos"
[2024-05-16 05:33:08] ID_LIKE="rhel fedora"
[2024-05-16 05:33:08] VERSION_ID="7"
[2024-05-16 05:33:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 05:33:08] ANSI_COLOR="0;31"
[2024-05-16 05:33:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 05:33:08] HOME_URL="https://www.centos.org/"
[2024-05-16 05:33:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 05:33:08] 
[2024-05-16 05:33:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 05:33:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 05:33:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 05:33:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 05:33:08] 
[2024-05-16 05:33:08] 2024-05-16 03:32:54,265 | INFO     | *************************************
[2024-05-16 05:33:08] 2024-05-16 03:32:54,768 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/1
[2024-05-16 05:33:08] 2024-05-16 03:32:54,792 | INFO     | sufficient remaining disk space (585828925440 B)
[2024-05-16 05:33:08] 2024-05-16 03:32:54,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 05:33:08] 2024-05-16 03:32:54,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 05:33:08] 2024-05-16 03:32:54,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 05:33:08] 2024-05-16 03:32:54,794 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 05:33:08] 2024-05-16 03:32:54,794 | INFO     | aborting loop
[2024-05-16 05:33:08] 2024-05-16 03:32:54,795 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 05:33:08] 2024-05-16 03:32:54,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 05:33:08] 2024-05-16 03:32:54,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 05:33:08] 2024-05-16 03:32:55,039 | INFO     | all payload control threads have been joined
[2024-05-16 05:33:08] 2024-05-16 03:32:55,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 05:33:08] 2024-05-16 03:32:55,798 | INFO     | [job] retrieve thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:55,800 | INFO     | [job] job monitor thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:55,800 | INFO     | all data control threads have been joined
[2024-05-16 05:33:08] 2024-05-16 03:32:55,852 | INFO     | all job control threads have been joined
[2024-05-16 05:33:08] 2024-05-16 03:32:56,044 | INFO     | [payload] control thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:56,269 | INFO     | [payload] failed_post thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:56,385 | INFO     | [job] validate thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:56,388 | INFO     | [data] copytool_in thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:56,462 | INFO     | [payload] validate_post thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:56,806 | INFO     | [data] control thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:56,858 | INFO     | [job] control thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:56,888 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:56,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 05:33:08] 2024-05-16 03:32:56,925 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:57,065 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:57,244 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:57,609 | INFO     | [data] copytool_out thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:32:57,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 05:33:08] 2024-05-16 03:32:57,899 | INFO     | [job] queue monitor thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:33:01,889 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 05:33:08] 2024-05-16 03:33:02,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47509135291456)>', '<ExcThread(monitor, started 47509308643072)>']
[2024-05-16 05:33:08] 2024-05-16 03:33:02,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 05:33:08] 2024-05-16 03:33:02,832 | INFO     | [monitor] control thread has ended
[2024-05-16 05:33:08] 2024-05-16 03:33:07,468 | INFO     | all workflow threads have been joined
[2024-05-16 05:33:08] 2024-05-16 03:33:07,468 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 05:33:08] 2024-05-16 03:33:07,468 | INFO     | traces error code: 0
[2024-05-16 05:33:08] 2024-05-16 03:33:07,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 05:33:08] 2024-05-16 03:33:07,604 [wrapper] ==== pilot stdout END ====
[2024-05-16 05:33:08] 2024-05-16 03:33:07,607 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 05:33:08] 2024-05-16 03:33:07,609 [wrapper] pilotpid: 1539264
[2024-05-16 05:33:08] 2024-05-16 03:33:07,612 [wrapper] Pilot exit status: 0
[2024-05-16 05:33:08] 2024-05-16 03:33:07,632 [wrapper] pandaids: 6205835445
[2024-05-16 05:33:08] 2024-05-16 03:33:07,708 [wrapper] cleanup: SIGTERM to supervisor_pilot 2168337 1539265
[2024-05-16 05:33:08] 2024-05-16 03:33:07,710 [wrapper] Test setup, not cleaning
[2024-05-16 05:33:08] 2024-05-16 03:33:07,712 [wrapper] ==== wrapper stdout END ====
[2024-05-16 05:33:08] 2024-05-16 03:33:07,714 [wrapper] ==== wrapper stderr END ====
[2024-05-16 05:33:08] 2024-05-16 03:33:07,718 [wrapper] apfmon messages muted
[2024-05-16 05:33:08]  *** Error codes and diagnostics ***
[2024-05-16 05:33:08]     "exeErrorCode": 0,
[2024-05-16 05:33:08]     "exeErrorDiag": "",
[2024-05-16 05:33:08]     "pilotErrorCode": 0,
[2024-05-16 05:33:08]     "pilotErrorDiag": "",
[2024-05-16 05:33:08]  *** Listing of results directory ***
[2024-05-16 05:33:08] total 841720
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc    467845 May 13 14:18 pilot3.tar.gz
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc      5633 May 13 14:38 queuedata.json
[2024-05-16 05:33:08] -rwx------ 1 boinc boinc     32251 May 13 14:38 runpilot2-wrapper.sh
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc       100 May 16 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 05:33:08] -rwxr-xr-x 1 boinc boinc      7986 May 16 01:37 run_atlas
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc       105 May 16 01:37 job.xml
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc      6663 May 16 01:37 init_data.xml
[2024-05-16 05:33:08] -rw-r--r-- 2 boinc boinc 603473326 May 16 01:37 EVNT.38776119._000212.pool.root.1
[2024-05-16 05:33:08] -rw-r--r-- 2 boinc boinc    480007 May 16 01:37 input.tar.gz
[2024-05-16 05:33:08] -rw-r--r-- 2 boinc boinc     17537 May 16 01:37 start_atlas.sh
[2024-05-16 05:33:08] drwxrwx--x 2 boinc boinc      4096 May 16 01:37 shared
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc         0 May 16 01:37 boinc_lockfile
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc      2631 May 16 01:37 pandaJob.out
[2024-05-16 05:33:08] -rw------- 1 boinc boinc       424 May 16 01:37 setup.sh.local
[2024-05-16 05:33:08] -rw------- 1 boinc boinc   1011347 May 16 01:37 agis_schedconf.cvmfs.json
[2024-05-16 05:33:08] -rw------- 1 boinc boinc   1324701 May 16 01:37 cric_ddmendpoints.json
[2024-05-16 05:33:08] drwx------ 4 boinc boinc      4096 May 16 01:37 pilot3
[2024-05-16 05:33:08] -rw------- 1 boinc boinc 251279780 May 16 05:32 HITS.38776125._005197.pool.root.1
[2024-05-16 05:33:08] -rw------- 1 boinc boinc        95 May 16 05:32 pilot_heartbeat.json
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc       531 May 16 05:32 boinc_task_state.xml
[2024-05-16 05:33:08] -rw------- 1 boinc boinc      1046 May 16 05:32 memory_monitor_summary.json
[2024-05-16 05:33:08] -rw------- 1 boinc boinc         0 May 16 05:32 agis_ddmendpoints.agis.ALL.json
[2024-05-16 05:33:08] -rw------- 1 boinc boinc    330301 May 16 05:32 log.38776125._005197.job.log.tgz.1
[2024-05-16 05:33:08] -rw------- 1 boinc boinc      7762 May 16 05:32 heartbeat.json
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc      8192 May 16 05:33 boinc_mmap_file
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc        28 May 16 05:33 wrapper_checkpoint.txt
[2024-05-16 05:33:08] -rw------- 1 boinc boinc      4344 May 16 05:33 pilotlog.txt
[2024-05-16 05:33:08] -rw------- 1 boinc boinc   1488985 May 16 05:33 log.38776125._005197.job.log.1
[2024-05-16 05:33:08] -rw------- 1 boinc boinc       357 May 16 05:33 output.list
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc       620 May 16 05:33 runtime_log
[2024-05-16 05:33:08] -rw------- 1 boinc boinc   1843200 May 16 05:33 result.tar.gz
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc     11410 May 16 05:33 runtime_log.err
[2024-05-16 05:33:08] -rw------- 1 boinc boinc       659 May 16 05:33 1WJMDmC8jQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmNiKKDmgESDum.diag
[2024-05-16 05:33:08] -rw-r--r-- 1 boinc boinc     21355 May 16 05:33 stderr.txt
[2024-05-16 05:33:08] HITS file was successfully produced:
[2024-05-16 05:33:08] -rw------- 1 boinc boinc 251279780 May 16 05:32 shared/HITS.pool.root.1
[2024-05-16 05:33:08]  *** Contents of shared directory: ***
[2024-05-16 05:33:08] total 837024
[2024-05-16 05:33:08] -rw-r--r-- 2 boinc boinc 603473326 May 16 01:37 ATLAS.root_0
[2024-05-16 05:33:08] -rw-r--r-- 2 boinc boinc    480007 May 16 01:37 input.tar.gz
[2024-05-16 05:33:08] -rw-r--r-- 2 boinc boinc     17537 May 16 01:37 start_atlas.sh
[2024-05-16 05:33:08] -rw------- 1 boinc boinc 251279780 May 16 05:32 HITS.pool.root.1
[2024-05-16 05:33:08] -rw------- 1 boinc boinc   1843200 May 16 05:33 result.tar.gz
05:33:09 (1534947): run_atlas exited; CPU time 53208.381730
05:33:09 (1534947): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN