Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:39:31 (2475333): wrapper (7.7.26015): starting
16:39:31 (2475333): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 16:39:31] Arguments: --nthreads 4
[2024-05-15 16:39:31] Threads: 4
[2024-05-15 16:39:31] Checking for CVMFS
[2024-05-15 16:39:31] No cvmfs_config command found, will try listing directly
[2024-05-15 16:39:31] CVMFS is ok
[2024-05-15 16:39:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 16:39:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 16:39:31] Further information can be found at the LHC@home message board.
[2024-05-15 16:39:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 16:39:31] Checking for apptainer binary...
[2024-05-15 16:39:31] which: no apptainer in ((null))
[2024-05-15 16:39:31] apptainer is not installed, using version from CVMFS
[2024-05-15 16:39:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 16:39:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-05-15 16:39:32] apptainer works
[2024-05-15 16:39:33] Set ATHENA_PROC_NUMBER=4
[2024-05-15 16:39:33] Set ATHENA_CORE_NUMBER=4
[2024-05-15 16:39:33] Starting ATLAS job with PandaID=6205834580
[2024-05-15 16:39:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:54:38 (2613007): wrapper (7.7.26015): starting
17:54:38 (2613007): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 17:54:38] Arguments: --nthreads 4
[2024-05-15 17:54:38] Threads: 4
[2024-05-15 17:54:38] This job has been restarted, cleaning up previous attempt
[2024-05-15 17:54:38] Checking for CVMFS
[2024-05-15 17:54:38] No cvmfs_config command found, will try listing directly
[2024-05-15 17:54:38] CVMFS is ok
[2024-05-15 17:54:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 17:54:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 17:54:38] Further information can be found at the LHC@home message board.
[2024-05-15 17:54:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 17:54:38] Checking for apptainer binary...
[2024-05-15 17:54:38] which: no apptainer in ((null))
[2024-05-15 17:54:38] apptainer is not installed, using version from CVMFS
[2024-05-15 17:54:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 17:54:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-05-15 17:54:39] apptainer works
[2024-05-15 17:54:39] Set ATHENA_PROC_NUMBER=4
[2024-05-15 17:54:39] Set ATHENA_CORE_NUMBER=4
[2024-05-15 17:54:39] Starting ATLAS job with PandaID=6205834580
[2024-05-15 17:54:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 21:13:15]  *** The last 200 lines of the pilot log: ***
[2024-05-15 21:13:15] 2024-05-15 19:13:01,112 | INFO     | current chi2=1.1112699753802429 (change=65.14651645754985 %)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,112 | INFO     | model: linear, x: [1715789120.0, 1715789181.0, 1715789242.0, 1715789303.0, 1715789364.0, 1715789425.0, 1715789486.0, 1715789547.0, 1715789608.0, 1715789669.0, 1715
[2024-05-15 21:13:15] 2024-05-15 19:13:01,112 | INFO     | sum of square deviations: 1963274020.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,113 | INFO     | sum of deviations: 6413344190.000001
[2024-05-15 21:13:15] 2024-05-15 19:13:01,113 | INFO     | mean x: 1715794732.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,113 | INFO     | mean y: 2341063.708108108
[2024-05-15 21:13:15] 2024-05-15 19:13:01,113 | INFO     | -- intersect: -5602573005.141439
[2024-05-15 21:13:15] 2024-05-15 19:13:01,113 | INFO     | intersect: -5602573005.141439
[2024-05-15 21:13:15] 2024-05-15 19:13:01,113 | INFO     | chi2: 0.03221809340314284
[2024-05-15 21:13:15] 2024-05-15 19:13:01,113 | INFO     | current chi2=0.03221809340314284 (change=97.10078611706226 %)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,113 | INFO     | model: linear, x: [1715789425.0, 1715789486.0, 1715789547.0, 1715789608.0, 1715789669.0, 1715789730.0, 1715789791.0, 1715789852.0, 1715789913.0, 1715789974.0, 1715
[2024-05-15 21:13:15] 2024-05-15 19:13:01,113 | INFO     | sum of square deviations: 1808350185.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,115 | INFO     | sum of deviations: 5122384231.999999
[2024-05-15 21:13:15] 2024-05-15 19:13:01,115 | INFO     | mean x: 1715794884.5
[2024-05-15 21:13:15] 2024-05-15 19:13:01,115 | INFO     | mean y: 2342270.577777778
[2024-05-15 21:13:15] 2024-05-15 19:13:01,115 | INFO     | -- intersect: -4857867181.4477215
[2024-05-15 21:13:15] 2024-05-15 19:13:01,115 | INFO     | intersect: -4857867181.4477215
[2024-05-15 21:13:15] 2024-05-15 19:13:01,115 | INFO     | chi2: 0.003622400150216503
[2024-05-15 21:13:15] 2024-05-15 19:13:01,115 | INFO     | current chi2=0.003622400150216503 (change=88.75662782123804 %)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,116 | INFO     | model: linear, x: [1715789730.0, 1715789791.0, 1715789852.0, 1715789913.0, 1715789974.0, 1715790035.0, 1715790096.0, 1715790157.0, 1715790218.0, 1715790279.0, 1715
[2024-05-15 21:13:15] 2024-05-15 19:13:01,116 | INFO     | sum of square deviations: 1661798600.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,118 | INFO     | sum of deviations: 4493588728.999999
[2024-05-15 21:13:15] 2024-05-15 19:13:01,118 | INFO     | mean x: 1715795037.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,118 | INFO     | mean y: 2342941.5257142857
[2024-05-15 21:13:15] 2024-05-15 19:13:01,119 | INFO     | -- intersect: -4637254925.229822
[2024-05-15 21:13:15] 2024-05-15 19:13:01,119 | INFO     | intersect: -4637254925.229822
[2024-05-15 21:13:15] 2024-05-15 19:13:01,119 | INFO     | chi2: 0.00043221348226768827
[2024-05-15 21:13:15] 2024-05-15 19:13:01,119 | INFO     | current chi2=0.00043221348226768827 (change=88.06831204879848 %)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,119 | INFO     | model: linear, x: [1715790035.0, 1715790096.0, 1715790157.0, 1715790218.0, 1715790279.0, 1715790340.0, 1715790401.0, 1715790462.0, 1715790523.0, 1715790584.0, 1715
[2024-05-15 21:13:15] 2024-05-15 19:13:01,120 | INFO     | sum of square deviations: 1523386702.5
[2024-05-15 21:13:15] 2024-05-15 19:13:01,121 | INFO     | sum of deviations: 3785233274.5
[2024-05-15 21:13:15] 2024-05-15 19:13:01,122 | INFO     | mean x: 1715795189.5
[2024-05-15 21:13:15] 2024-05-15 19:13:01,122 | INFO     | mean y: 2343719.0764705883
[2024-05-15 21:13:15] 2024-05-15 19:13:01,122 | INFO     | -- intersect: -4260976311.789056
[2024-05-15 21:13:15] 2024-05-15 19:13:01,122 | INFO     | intersect: -4260976311.789056
[2024-05-15 21:13:15] 2024-05-15 19:13:01,122 | INFO     | chi2: 0.0001996939487791723
[2024-05-15 21:13:15] 2024-05-15 19:13:01,122 | INFO     | current chi2=0.0001996939487791723 (change=53.797380930497376 %)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,123 | INFO     | model: linear, x: [1715790340.0, 1715790401.0, 1715790462.0, 1715790523.0, 1715790584.0, 1715790645.0, 1715790706.0, 1715790767.0, 1715790828.0, 1715790889.0, 1715
[2024-05-15 21:13:15] 2024-05-15 19:13:01,123 | INFO     | sum of square deviations: 1392881930.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,124 | INFO     | sum of deviations: 3305455922.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,124 | INFO     | mean x: 1715795342.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,124 | INFO     | mean y: 2344279.103030303
[2024-05-15 21:13:15] 2024-05-15 19:13:01,124 | INFO     | -- intersect: -4069419272.4234905
[2024-05-15 21:13:15] 2024-05-15 19:13:01,124 | INFO     | intersect: -4069419272.4234905
[2024-05-15 21:13:15] 2024-05-15 19:13:01,125 | INFO     | chi2: 0.0001596999148741706
[2024-05-15 21:13:15] 2024-05-15 19:13:01,125 | INFO     | current chi2=0.0001596999148741706 (change=20.027664408213155 %)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,125 | INFO     | left removable region: 60
[2024-05-15 21:13:15] 2024-05-15 19:13:01,125 | INFO     | model: linear, x: [1715792170.0, 1715792231.0, 1715792292.0, 1715792353.0, 1715792414.0, 1715792475.0, 1715792536.0, 1715792597.0, 1715792658.0, 1715792719.0, 1715
[2024-05-15 21:13:15] 2024-05-15 19:13:01,125 | INFO     | sum of square deviations: 665612480.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,126 | INFO     | sum of deviations: 1325319854.9999998
[2024-05-15 21:13:15] 2024-05-15 19:13:01,126 | INFO     | mean x: 1715796074.0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,126 | INFO     | mean y: 2346754.976744186
[2024-05-15 21:13:15] 2024-05-15 19:13:01,126 | INFO     | -- intersect: -3414023388.809095
[2024-05-15 21:13:15] 2024-05-15 19:13:01,126 | INFO     | intersect: -3414023388.809095
[2024-05-15 21:13:15] 2024-05-15 19:13:01,127 | INFO     | chi2: 7.424706725246564e-05
[2024-05-15 21:13:15] 2024-05-15 19:13:01,127 | INFO     | -- intersect: -3414023388.809095
[2024-05-15 21:13:15] 2024-05-15 19:13:01,127 | INFO     | current memory leak: 1.99 B/s (using 129 data points, chi2=0.00)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,127 | INFO     | ..............................
[2024-05-15 21:13:15] 2024-05-15 19:13:01,128 | INFO     | . Timing measurements:
[2024-05-15 21:13:15] 2024-05-15 19:13:01,128 | INFO     | . get job = 0 s
[2024-05-15 21:13:15] 2024-05-15 19:13:01,128 | INFO     | . initial setup = 0 s
[2024-05-15 21:13:15] 2024-05-15 19:13:01,128 | INFO     | . payload setup = 4 s
[2024-05-15 21:13:15] 2024-05-15 19:13:01,128 | INFO     | . stage-in = 0 s
[2024-05-15 21:13:15] 2024-05-15 19:13:01,128 | INFO     | . payload execution = 11866 s
[2024-05-15 21:13:15] 2024-05-15 19:13:01,128 | INFO     | . stage-out = 0 s
[2024-05-15 21:13:15] 2024-05-15 19:13:01,128 | INFO     | . log creation = 0 s
[2024-05-15 21:13:15] 2024-05-15 19:13:01,128 | INFO     | ..............................
[2024-05-15 21:13:15] 2024-05-15 19:13:01,192 | INFO     | 
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | job summary report
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | --------------------------------------------------
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | PanDA job id: 6205834580
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | task id: 38776125
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | errors: (none)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | pilot state: finished 
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | transexitcode: 0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | exeerrorcode: 0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | exeerrordiag: 
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | exitcode: 0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | exitmsg: OK
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | cpuconsumptiontime: 44786 s
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | nevents: 400
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | neventsw: 0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | pid: 2624655
[2024-05-15 21:13:15] 2024-05-15 19:13:01,193 | INFO     | pgrp: 2624655
[2024-05-15 21:13:15] 2024-05-15 19:13:01,194 | INFO     | corecount: 4
[2024-05-15 21:13:15] 2024-05-15 19:13:01,194 | INFO     | event service: False
[2024-05-15 21:13:15] 2024-05-15 19:13:01,194 | INFO     | sizes: {0: 2396482, 1: 2396681, 4: 2396887, 11: 2396915, 11875: 2426579, 11876: 2435561, 11877: 2435745, 11880: 2435915}
[2024-05-15 21:13:15] 2024-05-15 19:13:01,194 | INFO     | --------------------------------------------------
[2024-05-15 21:13:15] 2024-05-15 19:13:01,194 | INFO     | 
[2024-05-15 21:13:15] 2024-05-15 19:13:01,194 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-05-15 21:13:15] 2024-05-15 19:13:01,251 | WARNING  | process 2624655 is no longer using CPU - aborting
[2024-05-15 21:13:15] 2024-05-15 19:13:01,251 | INFO     | aborting job monitoring since job object (job id=6205834580) has expired
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | job 6205834580 has completed (purged errors)
[2024-05-15 21:13:15] 2024-05-15 19:13:01,268 | INFO     | overall cleanup function is called
[2024-05-15 21:13:15] 2024-05-15 19:13:02,274 | INFO     | --- collectZombieJob: --- 10, [2624655]
[2024-05-15 21:13:15] 2024-05-15 19:13:02,275 | INFO     | zombie collector waiting for pid 2624655
[2024-05-15 21:13:15] 2024-05-15 19:13:02,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 21:13:15] 2024-05-15 19:13:03,280 | INFO     | collected zombie processes
[2024-05-15 21:13:15] 2024-05-15 19:13:03,280 | INFO     | will now attempt to kill all subprocesses of pid=2624655
[2024-05-15 21:13:15] 2024-05-15 19:13:03,424 | INFO     | process IDs to be killed: [2624655] (in reverse order)
[2024-05-15 21:13:15] 2024-05-15 19:13:03,515 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 21:13:15] 2024-05-15 19:13:03,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 21:13:15] 2024-05-15 19:13:03,522 | INFO     | did not find any defunct processes belonging to 2624655
[2024-05-15 21:13:15] 2024-05-15 19:13:03,528 | INFO     | did not find any defunct processes belonging to 2624655
[2024-05-15 21:13:15] 2024-05-15 19:13:03,528 | INFO     | ready for new job
[2024-05-15 21:13:15] 2024-05-15 19:13:03,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 21:13:15] 2024-05-15 19:13:03,529 | INFO     | *************************************
[2024-05-15 21:13:15] 2024-05-15 19:13:03,529 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 21:13:15] 2024-05-15 19:13:03,529 | INFO     | *************************************
[2024-05-15 21:13:15] 2024-05-15 19:13:03,529 | INFO     | 
[2024-05-15 21:13:15] 2024-05-15 19:13:03,532 | INFO     | architecture information:
[2024-05-15 21:13:15] 2024-05-15 19:13:03,532 | INFO     | executing command: cat /etc/os-release
[2024-05-15 21:13:15] 2024-05-15 19:13:03,548 | INFO     | cat /etc/os-release:
[2024-05-15 21:13:15] NAME="CentOS Linux"
[2024-05-15 21:13:15] VERSION="7 (Core)"
[2024-05-15 21:13:15] ID="centos"
[2024-05-15 21:13:15] ID_LIKE="rhel fedora"
[2024-05-15 21:13:15] VERSION_ID="7"
[2024-05-15 21:13:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 21:13:15] ANSI_COLOR="0;31"
[2024-05-15 21:13:15] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 21:13:15] HOME_URL="https://www.centos.org/"
[2024-05-15 21:13:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 21:13:15] 
[2024-05-15 21:13:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 21:13:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 21:13:15] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 21:13:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 21:13:15] 
[2024-05-15 21:13:15] 2024-05-15 19:13:03,548 | INFO     | *************************************
[2024-05-15 21:13:15] 2024-05-15 19:13:04,051 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-05-15 21:13:15] 2024-05-15 19:13:04,068 | INFO     | sufficient remaining disk space (587692244992 B)
[2024-05-15 21:13:15] 2024-05-15 19:13:04,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 21:13:15] 2024-05-15 19:13:04,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 21:13:15] 2024-05-15 19:13:04,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 21:13:15] 2024-05-15 19:13:04,069 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 21:13:15] 2024-05-15 19:13:04,069 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 21:13:15] 2024-05-15 19:13:04,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 21:13:15] 2024-05-15 19:13:04,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 21:13:15] 2024-05-15 19:13:04,749 | INFO     | all job control threads have been joined
[2024-05-15 21:13:15] 2024-05-15 19:13:04,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 21:13:15] 2024-05-15 19:13:04,758 | INFO     | aborting loop
[2024-05-15 21:13:15] 2024-05-15 19:13:04,822 | INFO     | all payload control threads have been joined
[2024-05-15 21:13:15] 2024-05-15 19:13:04,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 21:13:15] 2024-05-15 19:13:05,059 | INFO     | all data control threads have been joined
[2024-05-15 21:13:15] 2024-05-15 19:13:05,073 | INFO     | [job] retrieve thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:05,636 | INFO     | [data] copytool_in thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:05,755 | INFO     | [job] control thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:05,763 | INFO     | [job] job monitor thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:05,827 | INFO     | [payload] control thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:05,991 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:06,064 | INFO     | [data] control thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:06,112 | INFO     | [payload] failed_post thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:06,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 21:13:15] 2024-05-15 19:13:06,384 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:06,394 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:06,426 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:06,487 | INFO     | [job] validate thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:06,633 | INFO     | [payload] validate_post thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:06,994 | INFO     | [data] copytool_out thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:07,202 | INFO     | [job] queue monitor thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:08,074 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 21:13:15] 2024-05-15 19:13:09,242 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47977467720768)>', '<ExcThread(monitor, started 47977634440960)>']
[2024-05-15 21:13:15] 2024-05-15 19:13:10,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 21:13:15] 2024-05-15 19:13:10,100 | INFO     | [monitor] control thread has ended
[2024-05-15 21:13:15] 2024-05-15 19:13:14,266 | INFO     | all workflow threads have been joined
[2024-05-15 21:13:15] 2024-05-15 19:13:14,266 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 21:13:15] 2024-05-15 19:13:14,267 | INFO     | traces error code: 0
[2024-05-15 21:13:15] 2024-05-15 19:13:14,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 21:13:15] 2024-05-15 19:13:14,339 [wrapper] ==== pilot stdout END ====
[2024-05-15 21:13:15] 2024-05-15 19:13:14,341 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 21:13:15] 2024-05-15 19:13:14,343 [wrapper] pilotpid: 2617390
[2024-05-15 21:13:15] 2024-05-15 19:13:14,345 [wrapper] Pilot exit status: 0
[2024-05-15 21:13:15] 2024-05-15 19:13:14,353 [wrapper] pandaids: 6205834580 6205834580
[2024-05-15 21:13:15] 2024-05-15 19:13:14,412 [wrapper] cleanup: SIGTERM to supervisor_pilot 3132305 2617391
[2024-05-15 21:13:15] 2024-05-15 19:13:14,414 [wrapper] Test setup, not cleaning
[2024-05-15 21:13:15] 2024-05-15 19:13:14,417 [wrapper] ==== wrapper stdout END ====
[2024-05-15 21:13:15] 2024-05-15 19:13:14,419 [wrapper] ==== wrapper stderr END ====
[2024-05-15 21:13:15] 2024-05-15 19:13:14,424 [wrapper] apfmon messages muted
[2024-05-15 21:13:15]  *** Error codes and diagnostics ***
[2024-05-15 21:13:15]     "exeErrorCode": 0,
[2024-05-15 21:13:15]     "exeErrorDiag": "",
[2024-05-15 21:13:15]     "pilotErrorCode": 0,
[2024-05-15 21:13:15]     "pilotErrorDiag": "",
[2024-05-15 21:13:15]  *** Listing of results directory ***
[2024-05-15 21:13:15] total 1424832
[2024-05-15 21:13:15] drwx------ 4 boinc boinc      4096 May  8 14:24 pilot3
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc    467845 May 13 14:18 pilot3.tar.gz
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc      5633 May 13 14:20 queuedata.json
[2024-05-15 21:13:15] -rwx------ 1 boinc boinc     32251 May 13 14:20 runpilot2-wrapper.sh
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc       100 May 15 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 21:13:15] -rwxr-xr-x 1 boinc boinc      7986 May 15 16:39 run_atlas
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc       105 May 15 16:39 job.xml
[2024-05-15 21:13:15] -rw-r--r-- 3 boinc boinc 601363685 May 15 16:39 EVNT.38776119._000203.pool.root.1
[2024-05-15 21:13:15] -rw-r--r-- 3 boinc boinc 601363685 May 15 16:39 ATLAS.root_0
[2024-05-15 21:13:15] -rw-r--r-- 2 boinc boinc     17537 May 15 16:39 start_atlas.sh
[2024-05-15 21:13:15] drwxrwx--x 2 boinc boinc      4096 May 15 16:39 shared
[2024-05-15 21:13:15] -rw-r--r-- 2 boinc boinc    480008 May 15 16:39 input.tar.gz
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc         0 May 15 16:39 boinc_lockfile
[2024-05-15 21:13:15] -rw------- 1 boinc boinc   1325758 May 15 16:39 cric_ddmendpoints.json
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc      6670 May 15 17:54 init_data.xml
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc      2633 May 15 17:54 pandaJob.out
[2024-05-15 21:13:15] -rw------- 1 boinc boinc       424 May 15 17:54 setup.sh.local
[2024-05-15 21:13:15] -rw------- 1 boinc boinc   1010542 May 15 17:54 agis_schedconf.cvmfs.json
[2024-05-15 21:13:15] -rw------- 1 boinc boinc        97 May 15 21:12 pilot_heartbeat.json
[2024-05-15 21:13:15] -rw------- 1 boinc boinc 249570638 May 15 21:12 HITS.38776125._004977.pool.root.1
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc      8192 May 15 21:12 boinc_mmap_file
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc        28 May 15 21:12 wrapper_checkpoint.txt
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc       532 May 15 21:12 boinc_task_state.xml
[2024-05-15 21:13:15] -rw------- 1 boinc boinc      1047 May 15 21:12 memory_monitor_summary.json
[2024-05-15 21:13:15] -rw------- 1 boinc boinc         0 May 15 21:12 agis_ddmendpoints.agis.ALL.json
[2024-05-15 21:13:15] -rw------- 1 boinc boinc    314536 May 15 21:12 log.38776125._004977.job.log.tgz.1
[2024-05-15 21:13:15] -rw------- 1 boinc boinc      7764 May 15 21:13 heartbeat.json
[2024-05-15 21:13:15] -rw------- 1 boinc boinc      4344 May 15 21:13 pilotlog.txt
[2024-05-15 21:13:15] -rw------- 1 boinc boinc   1286018 May 15 21:13 log.38776125._004977.job.log.1
[2024-05-15 21:13:15] -rw------- 1 boinc boinc       357 May 15 21:13 output.list
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc       620 May 15 21:13 runtime_log
[2024-05-15 21:13:15] -rw------- 1 boinc boinc   1617920 May 15 21:13 result.tar.gz
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc     11487 May 15 21:13 runtime_log.err
[2024-05-15 21:13:15] -rw------- 1 boinc boinc       771 May 15 21:13 XxwLDm0qjQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmyfKKDmlFDBJo.diag
[2024-05-15 21:13:15] -rw-r--r-- 1 boinc boinc     23397 May 15 21:13 stderr.txt
[2024-05-15 21:13:15] HITS file was successfully produced:
[2024-05-15 21:13:15] -rw------- 1 boinc boinc 249570638 May 15 21:12 shared/HITS.pool.root.1
[2024-05-15 21:13:15]  *** Contents of shared directory: ***
[2024-05-15 21:13:15] total 833076
[2024-05-15 21:13:15] -rw-r--r-- 3 boinc boinc 601363685 May 15 16:39 ATLAS.root_0
[2024-05-15 21:13:15] -rw-r--r-- 2 boinc boinc     17537 May 15 16:39 start_atlas.sh
[2024-05-15 21:13:15] -rw-r--r-- 2 boinc boinc    480008 May 15 16:39 input.tar.gz
[2024-05-15 21:13:15] -rw------- 1 boinc boinc 249570638 May 15 21:12 HITS.pool.root.1
[2024-05-15 21:13:15] -rw------- 1 boinc boinc   1617920 May 15 21:13 result.tar.gz
21:13:16 (2613007): run_atlas exited; CPU time 44536.765476
21:13:16 (2613007): called boinc_finish(0)

</stderr_txt>
]]>

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