Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:03:55 (3670174): wrapper (7.7.26015): starting
21:03:55 (3670174): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 21:03:55] Arguments: --nthreads 4
[2024-05-15 21:03:55] Threads: 4
[2024-05-15 21:03:55] Checking for CVMFS
[2024-05-15 21:03:55] No cvmfs_config command found, will try listing directly
[2024-05-15 21:03:55] CVMFS is ok
[2024-05-15 21:03:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 21:03:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 21:03:55] Further information can be found at the LHC@home message board.
[2024-05-15 21:03:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 21:03:55] Checking for apptainer binary...
[2024-05-15 21:03:55] which: no apptainer in ((null))
[2024-05-15 21:03:55] apptainer is not installed, using version from CVMFS
[2024-05-15 21:03:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 21:03:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-15 21:03:56] apptainer works
[2024-05-15 21:03:56] Set ATHENA_PROC_NUMBER=4
[2024-05-15 21:03:56] Set ATHENA_CORE_NUMBER=4
[2024-05-15 21:03:56] Starting ATLAS job with PandaID=6205834573
[2024-05-15 21:03:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 23:59:00]  *** The last 200 lines of the pilot log: ***
[2024-05-15 23:59:00] 2024-05-15 21:58:38,351 | INFO     | fitting pss+swap vs Time
[2024-05-15 23:59:00] 2024-05-15 21:58:38,351 | INFO     | model: linear, x: [1715799871.0, 1715799932.0, 1715799993.0, 1715800054.0, 1715800115.0, 1715800176.0, 1715800237.0, 1715800298.0, 1715800359.0, 1715800420.0, 1715
[2024-05-15 23:59:00] 2024-05-15 21:58:38,352 | INFO     | sum of square deviations: 1577789583.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,353 | INFO     | sum of deviations: 69708101085.5
[2024-05-15 23:59:00] 2024-05-15 21:58:38,353 | INFO     | mean x: 1715805086.5
[2024-05-15 23:59:00] 2024-05-15 21:58:38,353 | INFO     | mean y: 2237246.052325581
[2024-05-15 23:59:00] 2024-05-15 21:58:38,353 | INFO     | -- intersect: -75803507513.2329
[2024-05-15 23:59:00] 2024-05-15 21:58:38,353 | INFO     | intersect: -75803507513.2329
[2024-05-15 23:59:00] 2024-05-15 21:58:38,354 | INFO     | chi2: 5.240886553908909
[2024-05-15 23:59:00] 2024-05-15 21:58:38,354 | INFO     | model: linear, x: [1715799871.0, 1715799932.0, 1715799993.0, 1715800054.0, 1715800115.0, 1715800176.0, 1715800237.0, 1715800298.0, 1715800359.0, 1715800420.0, 1715
[2024-05-15 23:59:00] 2024-05-15 21:58:38,354 | INFO     | sum of square deviations: 1444149868.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,355 | INFO     | sum of deviations: 78272193432.00002
[2024-05-15 23:59:00] 2024-05-15 21:58:38,355 | INFO     | mean x: 1715804934.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,355 | INFO     | mean y: 2246723.8982035927
[2024-05-15 23:59:00] 2024-05-15 21:58:38,355 | INFO     | -- intersect: -92993514077.3125
[2024-05-15 23:59:00] 2024-05-15 21:58:38,356 | INFO     | intersect: -92993514077.3125
[2024-05-15 23:59:00] 2024-05-15 21:58:38,356 | INFO     | chi2: 4.442397425297615
[2024-05-15 23:59:00] 2024-05-15 21:58:38,356 | INFO     | current chi2=4.442397425297615 (change=15.23576441500612 %)
[2024-05-15 23:59:00] 2024-05-15 21:58:38,356 | INFO     | right removable region: 166
[2024-05-15 23:59:00] 2024-05-15 21:58:38,356 | INFO     | model: linear, x: [1715800176.0, 1715800237.0, 1715800298.0, 1715800359.0, 1715800420.0, 1715800481.0, 1715800542.0, 1715800603.0, 1715800664.0, 1715800725.0, 1715
[2024-05-15 23:59:00] 2024-05-15 21:58:38,357 | INFO     | sum of square deviations: 1444149868.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,358 | INFO     | sum of deviations: 28482345822.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,358 | INFO     | mean x: 1715805239.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,358 | INFO     | mean y: 2284127.3173652696
[2024-05-15 23:59:00] 2024-05-15 21:58:38,358 | INFO     | -- intersect: -33837803569.45163
[2024-05-15 23:59:00] 2024-05-15 21:58:38,358 | INFO     | intersect: -33837803569.45163
[2024-05-15 23:59:00] 2024-05-15 21:58:38,358 | INFO     | chi2: 2.4526565036671104
[2024-05-15 23:59:00] 2024-05-15 21:58:38,358 | INFO     | current chi2=2.4526565036671104 (change=53.201495998080716 %)
[2024-05-15 23:59:00] 2024-05-15 21:58:38,359 | INFO     | model: linear, x: [1715800481.0, 1715800542.0, 1715800603.0, 1715800664.0, 1715800725.0, 1715800786.0, 1715800847.0, 1715800908.0, 1715800969.0, 1715801030.0, 1715
[2024-05-15 23:59:00] 2024-05-15 21:58:38,359 | INFO     | sum of square deviations: 1318277740.5
[2024-05-15 23:59:00] 2024-05-15 21:58:38,360 | INFO     | sum of deviations: -3671218327.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,360 | INFO     | mean x: 1715805391.5
[2024-05-15 23:59:00] 2024-05-15 21:58:38,360 | INFO     | mean y: 2323091.4567901236
[2024-05-15 23:59:00] 2024-05-15 21:58:38,360 | INFO     | -- intersect: 4780600085.234346
[2024-05-15 23:59:00] 2024-05-15 21:58:38,360 | INFO     | intersect: 4780600085.234346
[2024-05-15 23:59:00] 2024-05-15 21:58:38,361 | INFO     | chi2: 0.9077005219395919
[2024-05-15 23:59:00] 2024-05-15 21:58:38,361 | INFO     | current chi2=0.9077005219395919 (change=62.991127351814825 %)
[2024-05-15 23:59:00] 2024-05-15 21:58:38,361 | INFO     | model: linear, x: [1715800786.0, 1715800847.0, 1715800908.0, 1715800969.0, 1715801030.0, 1715801091.0, 1715801152.0, 1715801213.0, 1715801274.0, 1715801335.0, 1715
[2024-05-15 23:59:00] 2024-05-15 21:58:38,361 | INFO     | sum of square deviations: 1199940638.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,363 | INFO     | sum of deviations: -8337924324.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,363 | INFO     | mean x: 1715805544.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,363 | INFO     | mean y: 2329020.5095541403
[2024-05-15 23:59:00] 2024-05-15 21:58:38,363 | INFO     | -- intersect: 11924799455.727577
[2024-05-15 23:59:00] 2024-05-15 21:58:38,363 | INFO     | intersect: 11924799455.727577
[2024-05-15 23:59:00] 2024-05-15 21:58:38,364 | INFO     | chi2: 0.8463867506861701
[2024-05-15 23:59:00] 2024-05-15 21:58:38,364 | INFO     | current chi2=0.8463867506861701 (change=6.754845873879792 %)
[2024-05-15 23:59:00] 2024-05-15 21:58:38,364 | INFO     | left removable region: 30
[2024-05-15 23:59:00] 2024-05-15 21:58:38,364 | INFO     | model: linear, x: [1715801701.0, 1715801762.0, 1715801823.0, 1715801884.0, 1715801945.0, 1715802006.0, 1715802067.0, 1715802128.0, 1715802189.0, 1715802250.0, 1715
[2024-05-15 23:59:00] 2024-05-15 21:58:38,364 | INFO     | sum of square deviations: 779958810.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,365 | INFO     | sum of deviations: 782808059.0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,365 | INFO     | mean x: 1715805818.5
[2024-05-15 23:59:00] 2024-05-15 21:58:38,365 | INFO     | mean y: 2343759.044117647
[2024-05-15 23:59:00] 2024-05-15 21:58:38,365 | INFO     | -- intersect: -1719730028.9305208
[2024-05-15 23:59:00] 2024-05-15 21:58:38,365 | INFO     | intersect: -1719730028.9305208
[2024-05-15 23:59:00] 2024-05-15 21:58:38,366 | INFO     | chi2: 8.277438915420714e-05
[2024-05-15 23:59:00] 2024-05-15 21:58:38,366 | INFO     | -- intersect: -1719730028.9305208
[2024-05-15 23:59:00] 2024-05-15 21:58:38,366 | INFO     | current memory leak: 1.00 B/s (using 136 data points, chi2=0.00)
[2024-05-15 23:59:00] 2024-05-15 21:58:38,366 | INFO     | ..............................
[2024-05-15 23:59:00] 2024-05-15 21:58:38,367 | INFO     | . Timing measurements:
[2024-05-15 23:59:00] 2024-05-15 21:58:38,367 | INFO     | . get job = 0 s
[2024-05-15 23:59:00] 2024-05-15 21:58:38,367 | INFO     | . initial setup = 1 s
[2024-05-15 23:59:00] 2024-05-15 21:58:38,367 | INFO     | . payload setup = 5 s
[2024-05-15 23:59:00] 2024-05-15 21:58:38,367 | INFO     | . stage-in = 0 s
[2024-05-15 23:59:00] 2024-05-15 21:58:38,367 | INFO     | . payload execution = 10442 s
[2024-05-15 23:59:00] 2024-05-15 21:58:38,367 | INFO     | . stage-out = 0 s
[2024-05-15 23:59:00] 2024-05-15 21:58:38,367 | INFO     | . log creation = 0 s
[2024-05-15 23:59:00] 2024-05-15 21:58:38,367 | INFO     | ..............................
[2024-05-15 23:59:00] 2024-05-15 21:58:38,482 | INFO     | 
[2024-05-15 23:59:00] 2024-05-15 21:58:38,482 | INFO     | job summary report
[2024-05-15 23:59:00] 2024-05-15 21:58:38,482 | INFO     | --------------------------------------------------
[2024-05-15 23:59:00] 2024-05-15 21:58:38,482 | INFO     | PanDA job id: 6205834573
[2024-05-15 23:59:00] 2024-05-15 21:58:38,482 | INFO     | task id: 38776125
[2024-05-15 23:59:00] 2024-05-15 21:58:38,483 | INFO     | errors: (none)
[2024-05-15 23:59:00] 2024-05-15 21:58:38,483 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 23:59:00] 2024-05-15 21:58:38,483 | INFO     | pilot state: finished 
[2024-05-15 23:59:00] 2024-05-15 21:58:38,483 | INFO     | transexitcode: 0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,483 | INFO     | exeerrorcode: 0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,483 | INFO     | exeerrordiag: 
[2024-05-15 23:59:00] 2024-05-15 21:58:38,483 | INFO     | exitcode: 0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,483 | INFO     | exitmsg: OK
[2024-05-15 23:59:00] 2024-05-15 21:58:38,483 | INFO     | cpuconsumptiontime: 39034 s
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | nevents: 400
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | neventsw: 0
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | pid: 3696250
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | pgrp: 3696250
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | corecount: 4
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | event service: False
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | sizes: {0: 2392204, 4: 2392410, 11: 2392438, 10452: 2430281, 10453: 2430281, 10457: 2430451}
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | --------------------------------------------------
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | 
[2024-05-15 23:59:00] 2024-05-15 21:58:38,484 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-05-15 23:59:00] 2024-05-15 21:58:38,669 | WARNING  | process 3696250 is no longer using CPU - aborting
[2024-05-15 23:59:00] 2024-05-15 21:58:38,670 | INFO     | aborting job monitoring since job object (job id=6205834573) has expired
[2024-05-15 23:59:00] 2024-05-15 21:58:38,678 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,678 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,679 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,679 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,680 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 23:59:00] 2024-05-15 21:58:38,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,680 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 23:59:00] 2024-05-15 21:58:38,681 | INFO     | job 6205834573 has completed (purged errors)
[2024-05-15 23:59:00] 2024-05-15 21:58:38,681 | INFO     | overall cleanup function is called
[2024-05-15 23:59:00] 2024-05-15 21:58:39,688 | INFO     | --- collectZombieJob: --- 10, [3696250]
[2024-05-15 23:59:00] 2024-05-15 21:58:39,688 | INFO     | zombie collector waiting for pid 3696250
[2024-05-15 23:59:00] 2024-05-15 21:58:39,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 23:59:00] 2024-05-15 21:58:40,693 | INFO     | collected zombie processes
[2024-05-15 23:59:00] 2024-05-15 21:58:40,693 | INFO     | will now attempt to kill all subprocesses of pid=3696250
[2024-05-15 23:59:00] 2024-05-15 21:58:40,952 | INFO     | process IDs to be killed: [3696250] (in reverse order)
[2024-05-15 23:59:00] 2024-05-15 21:58:41,133 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 23:59:00] 2024-05-15 21:58:41,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 23:59:00] 2024-05-15 21:58:41,148 | INFO     | did not find any defunct processes belonging to 3696250
[2024-05-15 23:59:00] 2024-05-15 21:58:41,159 | INFO     | did not find any defunct processes belonging to 3696250
[2024-05-15 23:59:00] 2024-05-15 21:58:41,159 | INFO     | ready for new job
[2024-05-15 23:59:00] 2024-05-15 21:58:41,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 23:59:00] 2024-05-15 21:58:41,160 | INFO     | *************************************
[2024-05-15 23:59:00] 2024-05-15 21:58:41,161 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 23:59:00] 2024-05-15 21:58:41,161 | INFO     | *************************************
[2024-05-15 23:59:00] 2024-05-15 21:58:41,161 | INFO     | 
[2024-05-15 23:59:00] 2024-05-15 21:58:41,166 | INFO     | architecture information:
[2024-05-15 23:59:00] 2024-05-15 21:58:41,166 | INFO     | executing command: cat /etc/os-release
[2024-05-15 23:59:00] 2024-05-15 21:58:41,185 | INFO     | cat /etc/os-release:
[2024-05-15 23:59:00] NAME="CentOS Linux"
[2024-05-15 23:59:00] VERSION="7 (Core)"
[2024-05-15 23:59:00] ID="centos"
[2024-05-15 23:59:00] ID_LIKE="rhel fedora"
[2024-05-15 23:59:00] VERSION_ID="7"
[2024-05-15 23:59:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 23:59:00] ANSI_COLOR="0;31"
[2024-05-15 23:59:00] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 23:59:00] HOME_URL="https://www.centos.org/"
[2024-05-15 23:59:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 23:59:00] 
[2024-05-15 23:59:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 23:59:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 23:59:00] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 23:59:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 23:59:00] 
[2024-05-15 23:59:00] 2024-05-15 21:58:41,186 | INFO     | *************************************
[2024-05-15 23:59:00] 2024-05-15 21:58:41,689 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-05-15 23:59:00] 2024-05-15 21:58:41,706 | INFO     | sufficient remaining disk space (3002556481536 B)
[2024-05-15 23:59:00] 2024-05-15 21:58:41,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 23:59:00] 2024-05-15 21:58:41,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 23:59:00] 2024-05-15 21:58:41,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 23:59:00] 2024-05-15 21:58:42,168 | INFO     | all data control threads have been joined
[2024-05-15 23:59:00] 2024-05-15 21:58:42,172 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 23:59:00] 2024-05-15 21:58:42,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 23:59:00] 2024-05-15 21:58:42,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 23:59:00] 2024-05-15 21:58:42,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 23:59:00] 2024-05-15 21:58:42,178 | INFO     | aborting loop
[2024-05-15 23:59:00] 2024-05-15 21:58:42,497 | INFO     | all payload control threads have been joined
[2024-05-15 23:59:00] 2024-05-15 21:58:42,563 | INFO     | all job control threads have been joined
[2024-05-15 23:59:00] 2024-05-15 21:58:42,711 | INFO     | [job] retrieve thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:42,725 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,173 | INFO     | [data] control thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,183 | INFO     | [job] job monitor thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,418 | INFO     | [payload] validate_post thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 23:59:00] 2024-05-15 21:58:43,502 | INFO     | [payload] control thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,538 | INFO     | [job] validate thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,568 | INFO     | [job] control thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,643 | INFO     | [data] copytool_in thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,649 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,712 | INFO     | [data] copytool_out thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:43,860 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:44,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 23:59:00] 2024-05-15 21:58:44,165 | INFO     | [payload] failed_post thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:44,493 | INFO     | [job] queue monitor thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:48,122 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:52,156 | INFO     | job.realtimelogging is not enabled
[2024-05-15 23:59:00] 2024-05-15 21:58:53,161 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 23:59:00] 2024-05-15 21:58:54,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47887642354752)>', '<ExcThread(monitor, started 47888222664448)>']
[2024-05-15 23:59:00] 2024-05-15 21:58:55,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 23:59:00] 2024-05-15 21:58:55,233 | INFO     | [monitor] control thread has ended
[2024-05-15 23:59:00] 2024-05-15 21:58:59,778 | INFO     | all workflow threads have been joined
[2024-05-15 23:59:00] 2024-05-15 21:58:59,778 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 23:59:00] 2024-05-15 21:58:59,778 | INFO     | traces error code: 0
[2024-05-15 23:59:00] 2024-05-15 21:58:59,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 23:59:00] 2024-05-15 21:58:59,874 [wrapper] ==== pilot stdout END ====
[2024-05-15 23:59:00] 2024-05-15 21:58:59,877 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 23:59:00] 2024-05-15 21:58:59,879 [wrapper] pilotpid: 3677495
[2024-05-15 23:59:00] 2024-05-15 21:58:59,880 [wrapper] Pilot exit status: 0
[2024-05-15 23:59:00] 2024-05-15 21:58:59,892 [wrapper] pandaids: 6205834573
[2024-05-15 23:59:00] 2024-05-15 21:58:59,983 [wrapper] cleanup: SIGTERM to supervisor_pilot  536577 3677496
[2024-05-15 23:59:00] 2024-05-15 21:58:59,986 [wrapper] Test setup, not cleaning
[2024-05-15 23:59:00] 2024-05-15 21:58:59,988 [wrapper] ==== wrapper stdout END ====
[2024-05-15 23:59:00] 2024-05-15 21:58:59,990 [wrapper] ==== wrapper stderr END ====
[2024-05-15 23:59:00] 2024-05-15 21:58:59,993 [wrapper] apfmon messages muted
[2024-05-15 23:59:00]  *** Error codes and diagnostics ***
[2024-05-15 23:59:00]     "exeErrorCode": 0,
[2024-05-15 23:59:00]     "exeErrorDiag": "",
[2024-05-15 23:59:00]     "pilotErrorCode": 0,
[2024-05-15 23:59:00]     "pilotErrorDiag": "",
[2024-05-15 23:59:00]  *** Listing of results directory ***
[2024-05-15 23:59:00] total 830320
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc      5633 May 13 14:18 queuedata.json
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc    467845 May 13 14:18 pilot3.tar.gz
[2024-05-15 23:59:00] -rwx------ 1 boinc boinc     32251 May 13 14:19 runpilot2-wrapper.sh
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc       100 May 15 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 23:59:00] -rwxr-xr-x 1 boinc boinc      7986 May 15 21:03 run_atlas
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc       105 May 15 21:03 job.xml
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc      6642 May 15 21:03 init_data.xml
[2024-05-15 23:59:00] -rw-r--r-- 2 boinc boinc 601363685 May 15 21:03 EVNT.38776119._000203.pool.root.1
[2024-05-15 23:59:00] -rw-r--r-- 2 boinc boinc     17537 May 15 21:03 start_atlas.sh
[2024-05-15 23:59:00] drwxrwx--x 2 boinc boinc      4096 May 15 21:03 shared
[2024-05-15 23:59:00] -rw-r--r-- 2 boinc boinc    480010 May 15 21:03 input.tar.gz
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc         0 May 15 21:03 boinc_lockfile
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc      2632 May 15 21:03 pandaJob.out
[2024-05-15 23:59:00] -rw------- 1 boinc boinc       424 May 15 21:03 setup.sh.local
[2024-05-15 23:59:00] -rw------- 1 boinc boinc   1011265 May 15 21:04 agis_schedconf.cvmfs.json
[2024-05-15 23:59:00] -rw------- 1 boinc boinc         0 May 15 21:04 agis_ddmendpoints.agis.ALL.json
[2024-05-15 23:59:00] -rw------- 1 boinc boinc   1324701 May 15 21:04 cric_ddmendpoints.json
[2024-05-15 23:59:00] drwx------ 4 boinc boinc      4096 May 15 21:04 pilot3
[2024-05-15 23:59:00] -rw------- 1 boinc boinc 242616218 May 15 23:58 HITS.38776125._004971.pool.root.1
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc       531 May 15 23:58 boinc_task_state.xml
[2024-05-15 23:59:00] -rw------- 1 boinc boinc      1043 May 15 23:58 memory_monitor_summary.json
[2024-05-15 23:59:00] -rw------- 1 boinc boinc    293504 May 15 23:58 log.38776125._004971.job.log.tgz.1
[2024-05-15 23:59:00] -rw------- 1 boinc boinc        95 May 15 23:58 pilot_heartbeat.json
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc        28 May 15 23:58 wrapper_checkpoint.txt
[2024-05-15 23:59:00] -rw------- 1 boinc boinc      7718 May 15 23:58 heartbeat.json
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc      8192 May 15 23:58 boinc_mmap_file
[2024-05-15 23:59:00] -rw------- 1 boinc boinc      4294 May 15 23:58 pilotlog.txt
[2024-05-15 23:59:00] -rw------- 1 boinc boinc   1077020 May 15 23:58 log.38776125._004971.job.log.1
[2024-05-15 23:59:00] -rw------- 1 boinc boinc       357 May 15 23:59 output.list
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc       620 May 15 23:59 runtime_log
[2024-05-15 23:59:00] -rw------- 1 boinc boinc   1392640 May 15 23:59 result.tar.gz
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc     11410 May 15 23:59 runtime_log.err
[2024-05-15 23:59:00] -rw------- 1 boinc boinc       658 May 15 23:59 CIQODmzpjQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmqfKKDmlGd3um.diag
[2024-05-15 23:59:00] -rw-r--r-- 1 boinc boinc     21287 May 15 23:59 stderr.txt
[2024-05-15 23:59:00] HITS file was successfully produced:
[2024-05-15 23:59:00] -rw------- 1 boinc boinc 242616218 May 15 23:58 shared/HITS.pool.root.1
[2024-05-15 23:59:00]  *** Contents of shared directory: ***
[2024-05-15 23:59:00] total 826064
[2024-05-15 23:59:00] -rw-r--r-- 2 boinc boinc 601363685 May 15 21:03 ATLAS.root_0
[2024-05-15 23:59:00] -rw-r--r-- 2 boinc boinc     17537 May 15 21:03 start_atlas.sh
[2024-05-15 23:59:00] -rw-r--r-- 2 boinc boinc    480010 May 15 21:03 input.tar.gz
[2024-05-15 23:59:00] -rw------- 1 boinc boinc 242616218 May 15 23:58 HITS.pool.root.1
[2024-05-15 23:59:00] -rw------- 1 boinc boinc   1392640 May 15 23:59 result.tar.gz
23:59:02 (3670174): run_atlas exited; CPU time 38795.280608
23:59:02 (3670174): called boinc_finish(0)

</stderr_txt>
]]>

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