Name | JZWLDmkojQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmGyGKDmb9nENm_0 |
Workunit | 222976689 |
Created | 13 May 2024, 12:19:08 UTC |
Sent | 13 May 2024, 14:34:40 UTC |
Report deadline | 21 May 2024, 14:34:40 UTC |
Received | 16 May 2024, 4:07:50 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 10690544 |
Run time | 4 hours 4 min 21 sec |
CPU time | 15 hours 19 min 41 sec |
Validate state | Valid |
Credit | 1,381.69 |
Device peak FLOPS | 11.65 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.30 GB |
Peak swap size | 2.93 GB |
Peak disk usage | 1.36 GB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <stderr_txt> 01:01:49 (3734343): wrapper (7.7.26015): starting 01:01:49 (3734343): wrapper: running run_atlas (--nthreads 4) [2024-05-16 01:01:49] Arguments: --nthreads 4 [2024-05-16 01:01:49] Threads: 4 [2024-05-16 01:01:49] Checking for CVMFS [2024-05-16 01:01:49] No cvmfs_config command found, will try listing directly [2024-05-16 01:01:49] CVMFS is ok [2024-05-16 01:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-05-16 01:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-05-16 01:01:49] Further information can be found at the LHC@home message board. [2024-05-16 01:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-05-16 01:01:49] Checking for apptainer binary... [2024-05-16 01:01:49] which: no apptainer in ((null)) [2024-05-16 01:01:49] apptainer is not installed, using version from CVMFS [2024-05-16 01:01:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-05-16 01:01:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz [2024-05-16 01:01:50] apptainer works [2024-05-16 01:01:50] Set ATHENA_PROC_NUMBER=4 [2024-05-16 01:01:50] Set ATHENA_CORE_NUMBER=4 [2024-05-16 01:01:50] Starting ATLAS job with PandaID=6205834539 [2024-05-16 01:01:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2024-05-16 05:06:07] *** The last 200 lines of the pilot log: *** [2024-05-16 05:06:07] 2024-05-16 03:05:51,098 | WARNING | format EVNTtoHITS has no such key: dbData [2024-05-16 05:06:07] 2024-05-16 03:05:51,098 | WARNING | format EVNTtoHITS has no such key: dbTime [2024-05-16 05:06:07] 2024-05-16 03:05:51,101 | INFO | fitting pss+swap vs Time [2024-05-16 05:06:07] 2024-05-16 03:05:51,101 | INFO | model: linear, x: [1715814144.0, 1715814205.0, 1715814266.0, 1715814327.0, 1715814388.0, 1715814449.0, 1715814510.0, 1715814571.0, 1715814632.0, 1715814693.0, 1715 [2024-05-16 05:06:07] 2024-05-16 03:05:51,101 | INFO | sum of square deviations: 4286517580.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,102 | INFO | sum of deviations: 99759370232.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,102 | INFO | mean x: 1715821433.5 [2024-05-16 05:06:07] 2024-05-16 03:05:51,102 | INFO | mean y: 2271415.158333333 [2024-05-16 05:06:07] 2024-05-16 03:05:51,102 | INFO | -- intersect: -39929739230.305405 [2024-05-16 05:06:07] 2024-05-16 03:05:51,102 | INFO | intersect: -39929739230.305405 [2024-05-16 05:06:07] 2024-05-16 03:05:51,102 | INFO | chi2: 4.778688469034967 [2024-05-16 05:06:07] 2024-05-16 03:05:51,103 | INFO | model: linear, x: [1715814144.0, 1715814205.0, 1715814266.0, 1715814327.0, 1715814388.0, 1715814449.0, 1715814510.0, 1715814571.0, 1715814632.0, 1715814693.0, 1715 [2024-05-16 05:06:07] 2024-05-16 03:05:51,103 | INFO | sum of square deviations: 4024149870.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | sum of deviations: 112635232603.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | mean x: 1715821281.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | mean y: 2278749.4680851065 [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | -- intersect: -48023250948.46347 [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | intersect: -48023250948.46347 [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | chi2: 3.982398976045757 [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | current chi2=3.982398976045757 (change=16.66334807445644 %) [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | right removable region: 234 [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | model: linear, x: [1715814449.0, 1715814510.0, 1715814571.0, 1715814632.0, 1715814693.0, 1715814754.0, 1715814815.0, 1715814876.0, 1715814937.0, 1715814998.0, 1715 [2024-05-16 05:06:07] 2024-05-16 03:05:51,104 | INFO | sum of square deviations: 4024149870.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,105 | INFO | sum of deviations: 44380051752.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,105 | INFO | mean x: 1715821586.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,105 | INFO | mean y: 2303526.3872340424 [2024-05-16 05:06:07] 2024-05-16 03:05:51,105 | INFO | -- intersect: -18920513278.1168 [2024-05-16 05:06:07] 2024-05-16 03:05:51,105 | INFO | intersect: -18920513278.1168 [2024-05-16 05:06:07] 2024-05-16 03:05:51,106 | INFO | chi2: 2.3162027139800694 [2024-05-16 05:06:07] 2024-05-16 03:05:51,106 | INFO | current chi2=2.3162027139800694 (change=51.530577291475645 %) [2024-05-16 05:06:07] 2024-05-16 03:05:51,106 | INFO | model: linear, x: [1715814754.0, 1715814815.0, 1715814876.0, 1715814937.0, 1715814998.0, 1715815059.0, 1715815120.0, 1715815181.0, 1715815242.0, 1715815303.0, 1715 [2024-05-16 05:06:07] 2024-05-16 03:05:51,106 | INFO | sum of square deviations: 3772712597.5 [2024-05-16 05:06:07] 2024-05-16 03:05:51,107 | INFO | sum of deviations: 167068263.9999981 [2024-05-16 05:06:07] 2024-05-16 03:05:51,107 | INFO | mean x: 1715821738.5 [2024-05-16 05:06:07] 2024-05-16 03:05:51,107 | INFO | mean y: 2330343.843478261 [2024-05-16 05:06:07] 2024-05-16 03:05:51,107 | INFO | -- intersect: -73651950.53394382 [2024-05-16 05:06:07] 2024-05-16 03:05:51,107 | INFO | intersect: -73651950.53394382 [2024-05-16 05:06:07] 2024-05-16 03:05:51,107 | INFO | chi2: 0.8845555761786087 [2024-05-16 05:06:07] 2024-05-16 03:05:51,107 | INFO | current chi2=0.8845555761786087 (change=61.81009672255223 %) [2024-05-16 05:06:07] 2024-05-16 03:05:51,107 | INFO | model: linear, x: [1715815059.0, 1715815120.0, 1715815181.0, 1715815242.0, 1715815303.0, 1715815364.0, 1715815425.0, 1715815486.0, 1715815547.0, 1715815608.0, 1715 [2024-05-16 05:06:07] 2024-05-16 03:05:51,108 | INFO | sum of square deviations: 3531973200.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,108 | INFO | sum of deviations: -5978560407.000009 [2024-05-16 05:06:07] 2024-05-16 03:05:51,108 | INFO | mean x: 1715821891.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,109 | INFO | mean y: 2334198.488888889 [2024-05-16 05:06:07] 2024-05-16 03:05:51,109 | INFO | -- intersect: 2906700750.0234485 [2024-05-16 05:06:07] 2024-05-16 03:05:51,109 | INFO | intersect: 2906700750.0234485 [2024-05-16 05:06:07] 2024-05-16 03:05:51,109 | INFO | chi2: 0.8326222656859457 [2024-05-16 05:06:07] 2024-05-16 03:05:51,109 | INFO | current chi2=0.8326222656859457 (change=5.87111899933088 %) [2024-05-16 05:06:07] 2024-05-16 03:05:51,109 | INFO | left removable region: 30 [2024-05-16 05:06:07] 2024-05-16 03:05:51,109 | INFO | model: linear, x: [1715815974.0, 1715816035.0, 1715816096.0, 1715816157.0, 1715816218.0, 1715816279.0, 1715816340.0, 1715816401.0, 1715816462.0, 1715816523.0, 1715 [2024-05-16 05:06:07] 2024-05-16 03:05:51,109 | INFO | sum of square deviations: 2632440055.0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,110 | INFO | sum of deviations: 4360196918.000001 [2024-05-16 05:06:07] 2024-05-16 03:05:51,110 | INFO | mean x: 1715822165.5 [2024-05-16 05:06:07] 2024-05-16 03:05:51,110 | INFO | mean y: 2346195.431372549 [2024-05-16 05:06:07] 2024-05-16 03:05:51,110 | INFO | -- intersect: -2839626408.518079 [2024-05-16 05:06:07] 2024-05-16 03:05:51,110 | INFO | intersect: -2839626408.518079 [2024-05-16 05:06:07] 2024-05-16 03:05:51,110 | INFO | chi2: 0.0004888649290459506 [2024-05-16 05:06:07] 2024-05-16 03:05:51,110 | INFO | -- intersect: -2839626408.518079 [2024-05-16 05:06:07] 2024-05-16 03:05:51,110 | INFO | current memory leak: 1.66 B/s (using 204 data points, chi2=0.00) [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | .............................. [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | . Timing measurements: [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | . get job = 0 s [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | . initial setup = 1 s [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | . payload setup = 5 s [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | . stage-in = 0 s [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | . payload execution = 14592 s [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | . stage-out = 1 s [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | . log creation = 0 s [2024-05-16 05:06:07] 2024-05-16 03:05:51,111 | INFO | .............................. [2024-05-16 05:06:07] 2024-05-16 03:05:51,531 | INFO | [2024-05-16 05:06:07] 2024-05-16 03:05:51,532 | INFO | job summary report [2024-05-16 05:06:07] 2024-05-16 03:05:51,532 | INFO | -------------------------------------------------- [2024-05-16 05:06:07] 2024-05-16 03:05:51,532 | INFO | PanDA job id: 6205834539 [2024-05-16 05:06:07] 2024-05-16 03:05:51,532 | INFO | task id: 38776125 [2024-05-16 05:06:07] 2024-05-16 03:05:51,532 | INFO | errors: (none) [2024-05-16 05:06:07] 2024-05-16 03:05:51,532 | INFO | status: LOG_TRANSFER = DONE [2024-05-16 05:06:07] 2024-05-16 03:05:51,532 | INFO | pilot state: finished [2024-05-16 05:06:07] 2024-05-16 03:05:51,532 | INFO | transexitcode: 0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,532 | INFO | exeerrorcode: 0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | exeerrordiag: [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | exitcode: 0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | exitmsg: OK [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | cpuconsumptiontime: 55468 s [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | nevents: 400 [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | neventsw: 0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | pid: 3745806 [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | pgrp: 3745806 [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | corecount: 4 [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | event service: False [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | sizes: {0: 2392205, 4: 2392411, 11: 2392439, 14601: 2423256, 14602: 2423255, 14604: 2432293, 14606: 2432477, 14617: 2432647} [2024-05-16 05:06:07] 2024-05-16 03:05:51,533 | INFO | -------------------------------------------------- [2024-05-16 05:06:07] 2024-05-16 03:05:51,534 | INFO | [2024-05-16 05:06:07] 2024-05-16 03:05:51,534 | INFO | executing command: ls -lF /scratch/boinc/var/slot28/slots/0 [2024-05-16 05:06:07] 2024-05-16 03:05:51,567 | INFO | queue jobs had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,567 | INFO | queue payloads had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue data_in had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue data_out had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue current_data_in had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue validated_jobs had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue validated_payloads had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue monitored_payloads had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue finished_jobs had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue finished_payloads had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue finished_data_in had 1 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue finished_data_out had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,568 | INFO | queue failed_jobs had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,569 | INFO | queue failed_payloads had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,569 | INFO | queue failed_data_in had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,569 | INFO | queue failed_data_out had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,569 | INFO | queue completed_jobs had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,569 | INFO | queue completed_jobids has 1 job(s) [2024-05-16 05:06:07] 2024-05-16 03:05:51,569 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,569 | INFO | queue messages had 0 job(s) [purged] [2024-05-16 05:06:07] 2024-05-16 03:05:51,569 | INFO | job 6205834539 has completed (purged errors) [2024-05-16 05:06:07] 2024-05-16 03:05:51,570 | INFO | overall cleanup function is called [2024-05-16 05:06:07] 2024-05-16 03:05:52,577 | INFO | --- collectZombieJob: --- 10, [3745806] [2024-05-16 05:06:07] 2024-05-16 03:05:52,578 | INFO | zombie collector waiting for pid 3745806 [2024-05-16 05:06:07] 2024-05-16 03:05:52,578 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2024-05-16 05:06:07] 2024-05-16 03:05:53,582 | INFO | collected zombie processes [2024-05-16 05:06:07] 2024-05-16 03:05:53,583 | INFO | will now attempt to kill all subprocesses of pid=3745806 [2024-05-16 05:06:07] 2024-05-16 03:05:53,803 | INFO | process IDs to be killed: [3745806] (in reverse order) [2024-05-16 05:06:07] 2024-05-16 03:05:53,947 | WARNING | found no corresponding commands to process id(s) [2024-05-16 05:06:07] 2024-05-16 03:05:53,948 | INFO | Do not look for orphan processes in BOINC jobs [2024-05-16 05:06:07] 2024-05-16 03:05:53,955 | INFO | did not find any defunct processes belonging to 3745806 [2024-05-16 05:06:07] 2024-05-16 03:05:53,962 | INFO | did not find any defunct processes belonging to 3745806 [2024-05-16 05:06:07] 2024-05-16 03:05:53,962 | INFO | ready for new job [2024-05-16 05:06:07] 2024-05-16 03:05:53,963 | INFO | pilot has finished with previous job - re-establishing logging [2024-05-16 05:06:07] 2024-05-16 03:05:53,964 | INFO | ************************************* [2024-05-16 05:06:07] 2024-05-16 03:05:53,964 | INFO | *** PanDA Pilot version 3.7.5.4 *** [2024-05-16 05:06:07] 2024-05-16 03:05:53,964 | INFO | ************************************* [2024-05-16 05:06:07] 2024-05-16 03:05:53,964 | INFO | [2024-05-16 05:06:07] 2024-05-16 03:05:53,967 | INFO | architecture information: [2024-05-16 05:06:07] 2024-05-16 03:05:53,968 | INFO | executing command: cat /etc/os-release [2024-05-16 05:06:07] 2024-05-16 03:05:53,986 | INFO | cat /etc/os-release: [2024-05-16 05:06:07] NAME="CentOS Linux" [2024-05-16 05:06:07] VERSION="7 (Core)" [2024-05-16 05:06:07] ID="centos" [2024-05-16 05:06:07] ID_LIKE="rhel fedora" [2024-05-16 05:06:07] VERSION_ID="7" [2024-05-16 05:06:07] PRETTY_NAME="CentOS Linux 7 (Core)" [2024-05-16 05:06:07] ANSI_COLOR="0;31" [2024-05-16 05:06:07] CPE_NAME="cpe:/o:centos:centos:7" [2024-05-16 05:06:07] HOME_URL="https://www.centos.org/" [2024-05-16 05:06:07] BUG_REPORT_URL="https://bugs.centos.org/" [2024-05-16 05:06:07] [2024-05-16 05:06:07] CENTOS_MANTISBT_PROJECT="CentOS-7" [2024-05-16 05:06:07] CENTOS_MANTISBT_PROJECT_VERSION="7" [2024-05-16 05:06:07] REDHAT_SUPPORT_PRODUCT="centos" [2024-05-16 05:06:07] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2024-05-16 05:06:07] [2024-05-16 05:06:07] 2024-05-16 03:05:53,986 | INFO | ************************************* [2024-05-16 05:06:07] 2024-05-16 03:05:54,489 | INFO | executing command: df -mP /scratch/boinc/var/slot28/slots/0 [2024-05-16 05:06:07] 2024-05-16 03:05:54,513 | INFO | sufficient remaining disk space (586920493056 B) [2024-05-16 05:06:07] 2024-05-16 03:05:54,513 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2024-05-16 05:06:07] 2024-05-16 03:05:54,514 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2024-05-16 05:06:07] 2024-05-16 03:05:54,514 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2024-05-16 05:06:07] 2024-05-16 03:05:54,514 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2024-05-16 05:06:07] 2024-05-16 03:05:54,515 | INFO | found 0 job(s) in 20 queues [2024-05-16 05:06:07] 2024-05-16 03:05:54,515 | INFO | aborting loop [2024-05-16 05:06:07] 2024-05-16 03:05:54,515 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2024-05-16 05:06:07] 2024-05-16 03:05:54,516 | WARNING | will wait for a maximum of 300 s for threads to finish [2024-05-16 05:06:07] 2024-05-16 03:05:54,523 | INFO | all payload control threads have been joined [2024-05-16 05:06:07] 2024-05-16 03:05:54,801 | INFO | all data control threads have been joined [2024-05-16 05:06:07] 2024-05-16 03:05:55,518 | INFO | [job] retrieve thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:55,520 | INFO | [job] job monitor thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:55,528 | INFO | [payload] control thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:55,549 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2024-05-16 05:06:07] 2024-05-16 03:05:55,623 | INFO | [job] validate thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:55,683 | INFO | all job control threads have been joined [2024-05-16 05:06:07] 2024-05-16 03:05:55,757 | INFO | [job] create_data_payload thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:55,771 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2024-05-16 05:06:07] 2024-05-16 03:05:55,806 | INFO | [data] control thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:55,940 | INFO | [payload] validate_pre thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:56,102 | INFO | [payload] execute_payloads thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:56,174 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2024-05-16 05:06:07] 2024-05-16 03:05:56,428 | INFO | [payload] validate_post thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:56,540 | INFO | [payload] failed_post thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:56,688 | INFO | [job] control thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:56,708 | INFO | [payload] run_realtimelog thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:56,988 | INFO | [data] copytool_in thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:57,179 | INFO | [job] queue monitor thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:57,776 | INFO | [data] copytool_out thread has finished [2024-05-16 05:06:07] 2024-05-16 03:05:59,555 | INFO | [data] queue_monitor thread has finished [2024-05-16 05:06:07] 2024-05-16 03:06:01,122 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47039817585728)>', '<ExcThread(monitor, started 47039990937344)>'] [2024-05-16 05:06:07] 2024-05-16 03:06:01,551 | WARNING | job_aborted has been set - aborting pilot monitoring [2024-05-16 05:06:07] 2024-05-16 03:06:01,552 | INFO | [monitor] control thread has ended [2024-05-16 05:06:07] 2024-05-16 03:06:06,147 | INFO | all workflow threads have been joined [2024-05-16 05:06:07] 2024-05-16 03:06:06,148 | INFO | end of generic workflow (traces error code: 0) [2024-05-16 05:06:07] 2024-05-16 03:06:06,148 | INFO | traces error code: 0 [2024-05-16 05:06:07] 2024-05-16 03:06:06,148 | INFO | pilot has finished (exit code=0, shell exit code=0) [2024-05-16 05:06:07] 2024-05-16 03:06:06,237 [wrapper] ==== pilot stdout END ==== [2024-05-16 05:06:07] 2024-05-16 03:06:06,239 [wrapper] ==== wrapper stdout RESUME ==== [2024-05-16 05:06:07] 2024-05-16 03:06:06,241 [wrapper] pilotpid: 3738694 [2024-05-16 05:06:07] 2024-05-16 03:06:06,247 [wrapper] Pilot exit status: 0 [2024-05-16 05:06:07] 2024-05-16 03:06:06,279 [wrapper] pandaids: 6205834539 [2024-05-16 05:06:07] 2024-05-16 03:06:06,346 [wrapper] cleanup: SIGTERM to supervisor_pilot 198393 3738695 [2024-05-16 05:06:07] 2024-05-16 03:06:06,353 [wrapper] Test setup, not cleaning [2024-05-16 05:06:07] 2024-05-16 03:06:06,361 [wrapper] ==== wrapper stdout END ==== [2024-05-16 05:06:07] 2024-05-16 03:06:06,369 [wrapper] ==== wrapper stderr END ==== [2024-05-16 05:06:07] 2024-05-16 03:06:06,383 [wrapper] apfmon messages muted [2024-05-16 05:06:07] *** Error codes and diagnostics *** [2024-05-16 05:06:07] "exeErrorCode": 0, [2024-05-16 05:06:07] "exeErrorDiag": "", [2024-05-16 05:06:07] "pilotErrorCode": 0, [2024-05-16 05:06:07] "pilotErrorDiag": "", [2024-05-16 05:06:07] *** Listing of results directory *** [2024-05-16 05:06:07] total 840892 [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 5633 May 13 14:18 queuedata.json [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 467845 May 13 14:18 pilot3.tar.gz [2024-05-16 05:06:07] -rwx------ 1 boinc boinc 32251 May 13 14:18 runpilot2-wrapper.sh [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 100 May 16 01:01 wrapper_26015_x86_64-pc-linux-gnu [2024-05-16 05:06:07] -rwxr-xr-x 1 boinc boinc 7986 May 16 01:01 run_atlas [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 105 May 16 01:01 job.xml [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 6663 May 16 01:01 init_data.xml [2024-05-16 05:06:07] -rw-r--r-- 2 boinc boinc 600995627 May 16 01:01 EVNT.38776119._000201.pool.root.1 [2024-05-16 05:06:07] -rw-r--r-- 2 boinc boinc 17537 May 16 01:01 start_atlas.sh [2024-05-16 05:06:07] drwxrwx--x 2 boinc boinc 4096 May 16 01:01 shared [2024-05-16 05:06:07] -rw-r--r-- 2 boinc boinc 480003 May 16 01:01 input.tar.gz [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 0 May 16 01:01 boinc_lockfile [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 2633 May 16 01:01 pandaJob.out [2024-05-16 05:06:07] -rw------- 1 boinc boinc 424 May 16 01:01 setup.sh.local [2024-05-16 05:06:07] -rw------- 1 boinc boinc 1011339 May 16 01:01 agis_schedconf.cvmfs.json [2024-05-16 05:06:07] -rw------- 1 boinc boinc 1324701 May 16 01:01 cric_ddmendpoints.json [2024-05-16 05:06:07] drwx------ 4 boinc boinc 4096 May 16 01:01 pilot3 [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 531 May 16 05:04 boinc_task_state.xml [2024-05-16 05:06:07] -rw------- 1 boinc boinc 252595158 May 16 05:04 HITS.38776125._004939.pool.root.1 [2024-05-16 05:06:07] -rw------- 1 boinc boinc 1044 May 16 05:05 memory_monitor_summary.json [2024-05-16 05:06:07] -rw------- 1 boinc boinc 0 May 16 05:05 agis_ddmendpoints.agis.ALL.json [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 28 May 16 05:05 wrapper_checkpoint.txt [2024-05-16 05:06:07] -rw------- 1 boinc boinc 362185 May 16 05:05 log.38776125._004939.job.log.tgz.1 [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 8192 May 16 05:05 boinc_mmap_file [2024-05-16 05:06:07] -rw------- 1 boinc boinc 95 May 16 05:05 pilot_heartbeat.json [2024-05-16 05:06:07] -rw------- 1 boinc boinc 7758 May 16 05:05 heartbeat.json [2024-05-16 05:06:07] -rw------- 1 boinc boinc 4344 May 16 05:06 pilotlog.txt [2024-05-16 05:06:07] -rw------- 1 boinc boinc 1617049 May 16 05:06 log.38776125._004939.job.log.1 [2024-05-16 05:06:07] -rw------- 1 boinc boinc 357 May 16 05:06 output.list [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 620 May 16 05:06 runtime_log [2024-05-16 05:06:07] -rw------- 1 boinc boinc 1996800 May 16 05:06 result.tar.gz [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 11410 May 16 05:06 runtime_log.err [2024-05-16 05:06:07] -rw------- 1 boinc boinc 657 May 16 05:06 JZWLDmkojQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmGyGKDmb9nENm.diag [2024-05-16 05:06:07] -rw-r--r-- 1 boinc boinc 21342 May 16 05:06 stderr.txt [2024-05-16 05:06:07] HITS file was successfully produced: [2024-05-16 05:06:07] -rw------- 1 boinc boinc 252595158 May 16 05:04 shared/HITS.pool.root.1 [2024-05-16 05:06:07] *** Contents of shared directory: *** [2024-05-16 05:06:07] total 836040 [2024-05-16 05:06:07] -rw-r--r-- 2 boinc boinc 600995627 May 16 01:01 ATLAS.root_0 [2024-05-16 05:06:07] -rw-r--r-- 2 boinc boinc 17537 May 16 01:01 start_atlas.sh [2024-05-16 05:06:07] -rw-r--r-- 2 boinc boinc 480003 May 16 01:01 input.tar.gz [2024-05-16 05:06:07] -rw------- 1 boinc boinc 252595158 May 16 05:04 HITS.pool.root.1 [2024-05-16 05:06:07] -rw------- 1 boinc boinc 1996800 May 16 05:06 result.tar.gz 05:06:09 (3734343): run_atlas exited; CPU time 55140.891280 05:06:09 (3734343): called boinc_finish(0) </stderr_txt> ]]>
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