Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:04:01 (3500461): wrapper (7.7.26015): starting
08:04:01 (3500461): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 08:04:01] Arguments: --nthreads 4
[2024-05-15 08:04:01] Threads: 4
[2024-05-15 08:04:01] Checking for CVMFS
[2024-05-15 08:04:01] No cvmfs_config command found, will try listing directly
[2024-05-15 08:04:01] CVMFS is ok
[2024-05-15 08:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 08:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 08:04:01] Further information can be found at the LHC@home message board.
[2024-05-15 08:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 08:04:01] Checking for apptainer binary...
[2024-05-15 08:04:01] which: no apptainer in ((null))
[2024-05-15 08:04:01] apptainer is not installed, using version from CVMFS
[2024-05-15 08:04:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 08:04:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-15 08:04:02] apptainer works
[2024-05-15 08:04:02] Set ATHENA_PROC_NUMBER=4
[2024-05-15 08:04:02] Set ATHENA_CORE_NUMBER=4
[2024-05-15 08:04:02] Starting ATLAS job with PandaID=6205834355
[2024-05-15 08:04:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 11:00:56]  *** The last 200 lines of the pilot log: ***
[2024-05-15 11:00:56] 2024-05-15 09:00:39,117 | INFO     | right removable region: 167
[2024-05-15 11:00:56] 2024-05-15 09:00:39,118 | INFO     | model: linear, x: [1715753389.0, 1715753450.0, 1715753511.0, 1715753572.0, 1715753633.0, 1715753694.0, 1715753755.0, 1715753816.0, 1715753877.0, 1715753938.0, 1715
[2024-05-15 11:00:56] 2024-05-15 09:00:39,131 | INFO     | sum of square deviations: 1470248962.0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,132 | INFO     | sum of deviations: 39280924898.50001
[2024-05-15 11:00:56] 2024-05-15 09:00:39,132 | INFO     | mean x: 1715758482.5
[2024-05-15 11:00:56] 2024-05-15 09:00:39,132 | INFO     | mean y: 2306608.898809524
[2024-05-15 11:00:56] 2024-05-15 09:00:39,132 | INFO     | -- intersect: -45837943469.1331
[2024-05-15 11:00:56] 2024-05-15 09:00:39,133 | INFO     | intersect: -45837943469.1331
[2024-05-15 11:00:56] 2024-05-15 09:00:39,133 | INFO     | chi2: 1.6634726907732675
[2024-05-15 11:00:56] 2024-05-15 09:00:39,133 | INFO     | current chi2=1.6634726907732675 (change=60.96911012596746 %)
[2024-05-15 11:00:56] 2024-05-15 09:00:39,133 | INFO     | model: linear, x: [1715753694.0, 1715753755.0, 1715753816.0, 1715753877.0, 1715753938.0, 1715753999.0, 1715754060.0, 1715754121.0, 1715754182.0, 1715754243.0, 1715
[2024-05-15 11:00:56] 2024-05-15 09:00:39,133 | INFO     | sum of square deviations: 1342841922.0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,134 | INFO     | sum of deviations: 6125195012.999999
[2024-05-15 11:00:56] 2024-05-15 09:00:39,134 | INFO     | mean x: 1715758635.0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,134 | INFO     | mean y: 2346305.8773006136
[2024-05-15 11:00:56] 2024-05-15 09:00:39,134 | INFO     | -- intersect: -7823858746.58433
[2024-05-15 11:00:56] 2024-05-15 09:00:39,134 | INFO     | intersect: -7823858746.58433
[2024-05-15 11:00:56] 2024-05-15 09:00:39,135 | INFO     | chi2: 0.05945873796029431
[2024-05-15 11:00:56] 2024-05-15 09:00:39,159 | INFO     | current chi2=0.05945873796029431 (change=96.42562584344833 %)
[2024-05-15 11:00:56] 2024-05-15 09:00:39,159 | INFO     | model: linear, x: [1715753999.0, 1715754060.0, 1715754121.0, 1715754182.0, 1715754243.0, 1715754304.0, 1715754365.0, 1715754426.0, 1715754487.0, 1715754548.0, 1715
[2024-05-15 11:00:56] 2024-05-15 09:00:39,159 | INFO     | sum of square deviations: 1223016419.5
[2024-05-15 11:00:56] 2024-05-15 09:00:39,160 | INFO     | sum of deviations: 1334680914.9999998
[2024-05-15 11:00:56] 2024-05-15 09:00:39,160 | INFO     | mean x: 1715758787.5
[2024-05-15 11:00:56] 2024-05-15 09:00:39,160 | INFO     | mean y: 2352319.430379747
[2024-05-15 11:00:56] 2024-05-15 09:00:39,160 | INFO     | -- intersect: -1870059589.2797227
[2024-05-15 11:00:56] 2024-05-15 09:00:39,161 | INFO     | intersect: -1870059589.2797227
[2024-05-15 11:00:56] 2024-05-15 09:00:39,161 | INFO     | chi2: 0.0009581288498489202
[2024-05-15 11:00:56] 2024-05-15 09:00:39,161 | INFO     | current chi2=0.0009581288498489202 (change=98.38858192636253 %)
[2024-05-15 11:00:56] 2024-05-15 09:00:39,161 | INFO     | model: linear, x: [1715754304.0, 1715754365.0, 1715754426.0, 1715754487.0, 1715754548.0, 1715754609.0, 1715754670.0, 1715754731.0, 1715754792.0, 1715754853.0, 1715
[2024-05-15 11:00:56] 2024-05-15 09:00:39,161 | INFO     | sum of square deviations: 1110539892.0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,162 | INFO     | sum of deviations: 754701150.0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,162 | INFO     | mean x: 1715758940.0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,162 | INFO     | mean y: 2353103.3790849675
[2024-05-15 11:00:56] 2024-05-15 09:00:39,162 | INFO     | -- intersect: -1163643052.6066208
[2024-05-15 11:00:56] 2024-05-15 09:00:39,162 | INFO     | intersect: -1163643052.6066208
[2024-05-15 11:00:56] 2024-05-15 09:00:39,162 | INFO     | chi2: 0.0005520853524744245
[2024-05-15 11:00:56] 2024-05-15 09:00:39,163 | INFO     | current chi2=0.0005520853524744245 (change=42.378798784581164 %)
[2024-05-15 11:00:56] 2024-05-15 09:00:39,185 | INFO     | model: linear, x: [1715754609.0, 1715754670.0, 1715754731.0, 1715754792.0, 1715754853.0, 1715754914.0, 1715754975.0, 1715755036.0, 1715755097.0, 1715755158.0, 1715
[2024-05-15 11:00:56] 2024-05-15 09:00:39,185 | INFO     | sum of square deviations: 1005179777.0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,186 | INFO     | sum of deviations: 639759795.4999999
[2024-05-15 11:00:56] 2024-05-15 09:00:39,186 | INFO     | mean x: 1715759092.5
[2024-05-15 11:00:56] 2024-05-15 09:00:39,186 | INFO     | mean y: 2353268.9256756757
[2024-05-15 11:00:56] 2024-05-15 09:00:39,186 | INFO     | -- intersect: -1089664011.2280471
[2024-05-15 11:00:56] 2024-05-15 09:00:39,187 | INFO     | intersect: -1089664011.2280471
[2024-05-15 11:00:56] 2024-05-15 09:00:39,187 | INFO     | chi2: 0.0005462076564853483
[2024-05-15 11:00:56] 2024-05-15 09:00:39,187 | INFO     | current chi2=0.0005462076564853483 (change=1.0646353797891235 %)
[2024-05-15 11:00:56] 2024-05-15 09:00:39,187 | INFO     | left removable region: 50
[2024-05-15 11:00:56] 2024-05-15 09:00:39,187 | INFO     | model: linear, x: [1715756134.0, 1715756195.0, 1715756256.0, 1715756317.0, 1715756378.0, 1715756439.0, 1715756500.0, 1715756561.0, 1715756622.0, 1715756683.0, 1715
[2024-05-15 11:00:56] 2024-05-15 09:00:39,187 | INFO     | sum of square deviations: 496597218.0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,188 | INFO     | sum of deviations: 310924929.9999999
[2024-05-15 11:00:56] 2024-05-15 09:00:39,188 | INFO     | mean x: 1715759672.0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,188 | INFO     | mean y: 2353188.871794872
[2024-05-15 11:00:56] 2024-05-15 09:00:39,188 | INFO     | -- intersect: -1071902639.7491032
[2024-05-15 11:00:56] 2024-05-15 09:00:39,188 | INFO     | intersect: -1071902639.7491032
[2024-05-15 11:00:56] 2024-05-15 09:00:39,188 | INFO     | chi2: 0.00028752064831740013
[2024-05-15 11:00:56] 2024-05-15 09:00:39,188 | INFO     | -- intersect: -1071902639.7491032
[2024-05-15 11:00:56] 2024-05-15 09:00:39,189 | INFO     | current memory leak: 0.63 B/s (using 117 data points, chi2=0.00)
[2024-05-15 11:00:56] 2024-05-15 09:00:39,189 | INFO     | ..............................
[2024-05-15 11:00:56] 2024-05-15 09:00:39,189 | INFO     | . Timing measurements:
[2024-05-15 11:00:56] 2024-05-15 09:00:39,189 | INFO     | . get job = 0 s
[2024-05-15 11:00:56] 2024-05-15 09:00:39,189 | INFO     | . initial setup = 1 s
[2024-05-15 11:00:56] 2024-05-15 09:00:39,190 | INFO     | . payload setup = 6 s
[2024-05-15 11:00:56] 2024-05-15 09:00:39,190 | INFO     | . stage-in = 0 s
[2024-05-15 11:00:56] 2024-05-15 09:00:39,190 | INFO     | . payload execution = 10547 s
[2024-05-15 11:00:56] 2024-05-15 09:00:39,190 | INFO     | . stage-out = 0 s
[2024-05-15 11:00:56] 2024-05-15 09:00:39,190 | INFO     | . log creation = 0 s
[2024-05-15 11:00:56] 2024-05-15 09:00:39,190 | INFO     | ..............................
[2024-05-15 11:00:56] 2024-05-15 09:00:39,281 | INFO     | 
[2024-05-15 11:00:56] 2024-05-15 09:00:39,283 | INFO     | job summary report
[2024-05-15 11:00:56] 2024-05-15 09:00:39,283 | INFO     | --------------------------------------------------
[2024-05-15 11:00:56] 2024-05-15 09:00:39,283 | INFO     | PanDA job id: 6205834355
[2024-05-15 11:00:56] 2024-05-15 09:00:39,283 | INFO     | task id: 38776125
[2024-05-15 11:00:56] 2024-05-15 09:00:39,283 | INFO     | errors: (none)
[2024-05-15 11:00:56] 2024-05-15 09:00:39,283 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 11:00:56] 2024-05-15 09:00:39,283 | INFO     | pilot state: finished 
[2024-05-15 11:00:56] 2024-05-15 09:00:39,283 | INFO     | transexitcode: 0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,283 | INFO     | exeerrorcode: 0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | exeerrordiag: 
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | exitcode: 0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | exitmsg: OK
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | cpuconsumptiontime: 39314 s
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | nevents: 400
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | neventsw: 0
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | pid: 3516755
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | pgrp: 3516755
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | corecount: 4
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | event service: False
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | sizes: {0: 2394520, 6: 2394726, 11: 2394754, 10557: 2423673, 10558: 2423672, 10559: 2432712, 10562: 2432896, 10567: 2433066}
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | --------------------------------------------------
[2024-05-15 11:00:56] 2024-05-15 09:00:39,284 | INFO     | 
[2024-05-15 11:00:56] 2024-05-15 09:00:39,285 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/1
[2024-05-15 11:00:56] 2024-05-15 09:00:39,307 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,307 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,307 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,307 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,309 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 11:00:56] 2024-05-15 09:00:39,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,309 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 11:00:56] 2024-05-15 09:00:39,309 | INFO     | job 6205834355 has completed (purged errors)
[2024-05-15 11:00:56] 2024-05-15 09:00:39,309 | INFO     | overall cleanup function is called
[2024-05-15 11:00:56] 2024-05-15 09:00:40,317 | INFO     | --- collectZombieJob: --- 10, [3516755]
[2024-05-15 11:00:56] 2024-05-15 09:00:40,317 | INFO     | zombie collector waiting for pid 3516755
[2024-05-15 11:00:56] 2024-05-15 09:00:40,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 11:00:56] 2024-05-15 09:00:41,322 | INFO     | collected zombie processes
[2024-05-15 11:00:56] 2024-05-15 09:00:41,323 | INFO     | will now attempt to kill all subprocesses of pid=3516755
[2024-05-15 11:00:56] 2024-05-15 09:00:41,561 | INFO     | process IDs to be killed: [3516755] (in reverse order)
[2024-05-15 11:00:56] 2024-05-15 09:00:41,734 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 11:00:56] 2024-05-15 09:00:41,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 11:00:56] 2024-05-15 09:00:41,748 | INFO     | did not find any defunct processes belonging to 3516755
[2024-05-15 11:00:56] 2024-05-15 09:00:41,758 | INFO     | did not find any defunct processes belonging to 3516755
[2024-05-15 11:00:56] 2024-05-15 09:00:41,758 | INFO     | ready for new job
[2024-05-15 11:00:56] 2024-05-15 09:00:41,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 11:00:56] 2024-05-15 09:00:41,759 | INFO     | *************************************
[2024-05-15 11:00:56] 2024-05-15 09:00:41,759 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 11:00:56] 2024-05-15 09:00:41,759 | INFO     | *************************************
[2024-05-15 11:00:56] 2024-05-15 09:00:41,759 | INFO     | 
[2024-05-15 11:00:56] 2024-05-15 09:00:41,764 | INFO     | architecture information:
[2024-05-15 11:00:56] 2024-05-15 09:00:41,764 | INFO     | executing command: cat /etc/os-release
[2024-05-15 11:00:56] 2024-05-15 09:00:41,785 | INFO     | cat /etc/os-release:
[2024-05-15 11:00:56] NAME="CentOS Linux"
[2024-05-15 11:00:56] VERSION="7 (Core)"
[2024-05-15 11:00:56] ID="centos"
[2024-05-15 11:00:56] ID_LIKE="rhel fedora"
[2024-05-15 11:00:56] VERSION_ID="7"
[2024-05-15 11:00:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 11:00:56] ANSI_COLOR="0;31"
[2024-05-15 11:00:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 11:00:56] HOME_URL="https://www.centos.org/"
[2024-05-15 11:00:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 11:00:56] 
[2024-05-15 11:00:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 11:00:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 11:00:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 11:00:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 11:00:56] 
[2024-05-15 11:00:56] 2024-05-15 09:00:41,786 | INFO     | *************************************
[2024-05-15 11:00:56] 2024-05-15 09:00:42,288 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/1
[2024-05-15 11:00:56] 2024-05-15 09:00:42,310 | INFO     | sufficient remaining disk space (2996246151168 B)
[2024-05-15 11:00:56] 2024-05-15 09:00:42,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 11:00:56] 2024-05-15 09:00:42,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 11:00:56] 2024-05-15 09:00:42,311 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 11:00:56] 2024-05-15 09:00:42,312 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 11:00:56] 2024-05-15 09:00:42,312 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 11:00:56] 2024-05-15 09:00:42,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 11:00:56] 2024-05-15 09:00:42,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 11:00:56] 2024-05-15 09:00:42,382 | INFO     | all payload control threads have been joined
[2024-05-15 11:00:56] 2024-05-15 09:00:42,799 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-15 11:00:56] 2024-05-15 09:00:42,799 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-15 11:00:56] 2024-05-15 09:00:42,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:00:56] 2024-05-15 09:00:42,799 | INFO     | will abort loop
[2024-05-15 11:00:56] 2024-05-15 09:00:42,808 | INFO     | all data control threads have been joined
[2024-05-15 11:00:56] 2024-05-15 09:00:43,316 | INFO     | [job] retrieve thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:43,383 | INFO     | [payload] control thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:43,500 | INFO     | [payload] validate_post thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:43,566 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:43,801 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:43,804 | INFO     | [job] job monitor thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:43,813 | INFO     | [data] control thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:44,008 | INFO     | all job control threads have been joined
[2024-05-15 11:00:56] 2024-05-15 09:00:44,114 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:44,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:00:56] 2024-05-15 09:00:44,318 | INFO     | [data] copytool_out thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:44,419 | INFO     | [data] copytool_in thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:44,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 11:00:56] 2024-05-15 09:00:44,609 | INFO     | [payload] failed_post thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:44,763 | INFO     | [job] validate thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:44,792 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:45,014 | INFO     | [job] control thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:45,294 | INFO     | [job] queue monitor thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:48,496 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 11:00:56] 2024-05-15 09:00:49,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47649835758656)>', '<ExcThread(monitor, started 47650007271168)>']
[2024-05-15 11:00:56] 2024-05-15 09:00:50,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 11:00:56] 2024-05-15 09:00:50,350 | INFO     | [monitor] control thread has ended
[2024-05-15 11:00:56] 2024-05-15 09:00:55,018 | INFO     | all workflow threads have been joined
[2024-05-15 11:00:56] 2024-05-15 09:00:55,018 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 11:00:56] 2024-05-15 09:00:55,018 | INFO     | traces error code: 0
[2024-05-15 11:00:56] 2024-05-15 09:00:55,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 11:00:56] 2024-05-15 09:00:55,120 [wrapper] ==== pilot stdout END ====
[2024-05-15 11:00:56] 2024-05-15 09:00:55,122 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 11:00:56] 2024-05-15 09:00:55,124 [wrapper] pilotpid: 3505181
[2024-05-15 11:00:56] 2024-05-15 09:00:55,126 [wrapper] Pilot exit status: 0
[2024-05-15 11:00:56] 2024-05-15 09:00:55,144 [wrapper] pandaids: 6205834355
[2024-05-15 11:00:56] 2024-05-15 09:00:55,272 [wrapper] cleanup: SIGTERM to supervisor_pilot  176631 3505182
[2024-05-15 11:00:56] 2024-05-15 09:00:55,274 [wrapper] Test setup, not cleaning
[2024-05-15 11:00:56] 2024-05-15 09:00:55,275 [wrapper] ==== wrapper stdout END ====
[2024-05-15 11:00:56] 2024-05-15 09:00:55,276 [wrapper] ==== wrapper stderr END ====
[2024-05-15 11:00:56] 2024-05-15 09:00:55,279 [wrapper] apfmon messages muted
[2024-05-15 11:00:56]  *** Error codes and diagnostics ***
[2024-05-15 11:00:56]     "exeErrorCode": 0,
[2024-05-15 11:00:56]     "exeErrorDiag": "",
[2024-05-15 11:00:56]     "pilotErrorCode": 0,
[2024-05-15 11:00:56]     "pilotErrorDiag": "",
[2024-05-15 11:00:56]  *** Listing of results directory ***
[2024-05-15 11:00:56] total 825484
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc    467845 May 13 14:02 pilot3.tar.gz
[2024-05-15 11:00:56] -rwx------ 1 boinc boinc     32251 May 13 14:11 runpilot2-wrapper.sh
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc      5633 May 13 14:11 queuedata.json
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc       100 May 15 08:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 11:00:56] -rwxr-xr-x 1 boinc boinc      7986 May 15 08:03 run_atlas
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc       105 May 15 08:03 job.xml
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc      6644 May 15 08:04 init_data.xml
[2024-05-15 11:00:56] -rw-r--r-- 2 boinc boinc 597357766 May 15 08:04 EVNT.38776119._000196.pool.root.1
[2024-05-15 11:00:56] -rw-r--r-- 2 boinc boinc     17537 May 15 08:04 start_atlas.sh
[2024-05-15 11:00:56] drwxrwx--x 2 boinc boinc      4096 May 15 08:04 shared
[2024-05-15 11:00:56] -rw-r--r-- 2 boinc boinc    480001 May 15 08:04 input.tar.gz
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc         0 May 15 08:04 boinc_lockfile
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc      2641 May 15 08:04 pandaJob.out
[2024-05-15 11:00:56] -rw------- 1 boinc boinc       424 May 15 08:04 setup.sh.local
[2024-05-15 11:00:56] -rw------- 1 boinc boinc   1007426 May 15 08:04 agis_schedconf.cvmfs.json
[2024-05-15 11:00:56] -rw------- 1 boinc boinc         0 May 15 08:04 agis_ddmendpoints.agis.ALL.json
[2024-05-15 11:00:56] -rw------- 1 boinc boinc   1324588 May 15 08:04 cric_ddmendpoints.json
[2024-05-15 11:00:56] drwx------ 4 boinc boinc      4096 May 15 08:04 pilot3
[2024-05-15 11:00:56] -rw------- 1 boinc boinc        95 May 15 10:59 pilot_heartbeat.json
[2024-05-15 11:00:56] -rw------- 1 boinc boinc 241628283 May 15 10:59 HITS.38776125._004796.pool.root.1
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc       531 May 15 11:00 boinc_task_state.xml
[2024-05-15 11:00:56] -rw------- 1 boinc boinc      1043 May 15 11:00 memory_monitor_summary.json
[2024-05-15 11:00:56] -rw------- 1 boinc boinc    294631 May 15 11:00 log.38776125._004796.job.log.tgz.1
[2024-05-15 11:00:56] -rw------- 1 boinc boinc      7722 May 15 11:00 heartbeat.json
[2024-05-15 11:00:56] -rw------- 1 boinc boinc      4532 May 15 11:00 pilotlog.txt
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc        28 May 15 11:00 wrapper_checkpoint.txt
[2024-05-15 11:00:56] -rw------- 1 boinc boinc   1099218 May 15 11:00 log.38776125._004796.job.log.1
[2024-05-15 11:00:56] -rw------- 1 boinc boinc       357 May 15 11:00 output.list
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc       620 May 15 11:00 runtime_log
[2024-05-15 11:00:56] -rw------- 1 boinc boinc   1413120 May 15 11:00 result.tar.gz
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc     11429 May 15 11:00 runtime_log.err
[2024-05-15 11:00:56] -rw------- 1 boinc boinc       658 May 15 11:00 NelLDm3hjQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmgeKKDmHysCKm.diag
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc      8192 May 15 11:00 boinc_mmap_file
[2024-05-15 11:00:56] -rw-r--r-- 1 boinc boinc     21447 May 15 11:00 stderr.txt
[2024-05-15 11:00:56] HITS file was successfully produced:
[2024-05-15 11:00:56] -rw------- 1 boinc boinc 241628283 May 15 10:59 shared/HITS.pool.root.1
[2024-05-15 11:00:56]  *** Contents of shared directory: ***
[2024-05-15 11:00:56] total 821208
[2024-05-15 11:00:56] -rw-r--r-- 2 boinc boinc 597357766 May 15 08:04 ATLAS.root_0
[2024-05-15 11:00:56] -rw-r--r-- 2 boinc boinc     17537 May 15 08:04 start_atlas.sh
[2024-05-15 11:00:56] -rw-r--r-- 2 boinc boinc    480001 May 15 08:04 input.tar.gz
[2024-05-15 11:00:56] -rw------- 1 boinc boinc 241628283 May 15 10:59 HITS.pool.root.1
[2024-05-15 11:00:56] -rw------- 1 boinc boinc   1413120 May 15 11:00 result.tar.gz
11:00:57 (3500461): run_atlas exited; CPU time 39066.214110
11:00:57 (3500461): called boinc_finish(0)

</stderr_txt>
]]>

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