Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:05:49 (3819546): wrapper (7.7.26015): starting
09:05:49 (3819546): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 09:05:49] Arguments: --nthreads 4
[2024-05-15 09:05:49] Threads: 4
[2024-05-15 09:05:49] Checking for CVMFS
[2024-05-15 09:05:49] No cvmfs_config command found, will try listing directly
[2024-05-15 09:05:49] CVMFS is ok
[2024-05-15 09:05:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 09:05:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 09:05:49] Further information can be found at the LHC@home message board.
[2024-05-15 09:05:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 09:05:49] Checking for apptainer binary...
[2024-05-15 09:05:49] which: no apptainer in ((null))
[2024-05-15 09:05:49] apptainer is not installed, using version from CVMFS
[2024-05-15 09:05:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 09:05:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-15 09:05:50] apptainer works
[2024-05-15 09:05:50] Set ATHENA_PROC_NUMBER=4
[2024-05-15 09:05:50] Set ATHENA_CORE_NUMBER=4
[2024-05-15 09:05:50] Starting ATLAS job with PandaID=6205834335
[2024-05-15 09:05:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 11:58:18]  *** The last 200 lines of the pilot log: ***
[2024-05-15 11:58:18] 2024-05-15 09:57:56,945 | INFO     | model: linear, x: [1715756792.0, 1715756853.0, 1715756914.0, 1715756975.0, 1715757036.0, 1715757097.0, 1715757158.0, 1715757219.0, 1715757280.0, 1715757341.0, 1715
[2024-05-15 11:58:18] 2024-05-15 09:57:56,945 | INFO     | sum of square deviations: 1496660620.0
[2024-05-15 11:58:18] 2024-05-15 09:57:56,946 | INFO     | sum of deviations: 64754369073.99995
[2024-05-15 11:58:18] 2024-05-15 09:57:56,946 | INFO     | mean x: 1715761916.0
[2024-05-15 11:58:18] 2024-05-15 09:57:56,946 | INFO     | mean y: 2248649.9704142013
[2024-05-15 11:58:18] 2024-05-15 09:57:56,946 | INFO     | -- intersect: -74231735238.62639
[2024-05-15 11:58:18] 2024-05-15 09:57:56,946 | INFO     | intersect: -74231735238.62639
[2024-05-15 11:58:18] 2024-05-15 09:57:56,946 | INFO     | chi2: 5.115288427079168
[2024-05-15 11:58:18] 2024-05-15 09:57:56,947 | INFO     | model: linear, x: [1715756792.0, 1715756853.0, 1715756914.0, 1715756975.0, 1715757036.0, 1715757097.0, 1715757158.0, 1715757219.0, 1715757280.0, 1715757341.0, 1715
[2024-05-15 11:58:18] 2024-05-15 09:57:56,947 | INFO     | sum of square deviations: 1367709365.0
[2024-05-15 11:58:18] 2024-05-15 09:57:56,948 | INFO     | sum of deviations: 73547412659.49997
[2024-05-15 11:58:18] 2024-05-15 09:57:56,948 | INFO     | mean x: 1715761763.5
[2024-05-15 11:58:18] 2024-05-15 09:57:56,948 | INFO     | mean y: 2258733.1524390243
[2024-05-15 11:58:18] 2024-05-15 09:57:56,948 | INFO     | -- intersect: -92261376856.9467
[2024-05-15 11:58:18] 2024-05-15 09:57:56,948 | INFO     | intersect: -92261376856.9467
[2024-05-15 11:58:18] 2024-05-15 09:57:56,949 | INFO     | chi2: 4.271727682459333
[2024-05-15 11:58:18] 2024-05-15 09:57:56,949 | INFO     | current chi2=4.271727682459333 (change=16.49097126477204 %)
[2024-05-15 11:58:18] 2024-05-15 09:57:56,949 | INFO     | right removable region: 163
[2024-05-15 11:58:18] 2024-05-15 09:57:56,949 | INFO     | model: linear, x: [1715757097.0, 1715757158.0, 1715757219.0, 1715757280.0, 1715757341.0, 1715757402.0, 1715757463.0, 1715757524.0, 1715757585.0, 1715757646.0, 1715
[2024-05-15 11:58:18] 2024-05-15 09:57:56,949 | INFO     | sum of square deviations: 1367709365.0
[2024-05-15 11:58:18] 2024-05-15 09:57:56,950 | INFO     | sum of deviations: 25815110757.000004
[2024-05-15 11:58:18] 2024-05-15 09:57:56,950 | INFO     | mean x: 1715762068.5
[2024-05-15 11:58:18] 2024-05-15 09:57:56,951 | INFO     | mean y: 2294553.012195122
[2024-05-15 11:58:18] 2024-05-15 09:57:56,951 | INFO     | -- intersect: -32382208298.576397
[2024-05-15 11:58:18] 2024-05-15 09:57:56,951 | INFO     | intersect: -32382208298.576397
[2024-05-15 11:58:18] 2024-05-15 09:57:56,951 | INFO     | chi2: 2.5536648205841956
[2024-05-15 11:58:18] 2024-05-15 09:57:56,951 | INFO     | current chi2=2.5536648205841956 (change=50.07779410705997 %)
[2024-05-15 11:58:18] 2024-05-15 09:57:56,951 | INFO     | model: linear, x: [1715757402.0, 1715757463.0, 1715757524.0, 1715757585.0, 1715757646.0, 1715757707.0, 1715757768.0, 1715757829.0, 1715757890.0, 1715757951.0, 1715
[2024-05-15 11:58:18] 2024-05-15 09:57:56,952 | INFO     | sum of square deviations: 1246386160.0
[2024-05-15 11:58:18] 2024-05-15 09:57:56,952 | INFO     | sum of deviations: -6158307521.0
[2024-05-15 11:58:18] 2024-05-15 09:57:56,953 | INFO     | mean x: 1715762221.0
[2024-05-15 11:58:18] 2024-05-15 09:57:56,953 | INFO     | mean y: 2334761.8364779875
[2024-05-15 11:58:18] 2024-05-15 09:57:56,953 | INFO     | -- intersect: 8479796826.909444
[2024-05-15 11:58:18] 2024-05-15 09:57:56,953 | INFO     | intersect: 8479796826.909444
[2024-05-15 11:58:18] 2024-05-15 09:57:56,953 | INFO     | chi2: 0.9696621638603904
[2024-05-15 11:58:18] 2024-05-15 09:57:56,953 | INFO     | current chi2=0.9696621638603904 (change=62.028604692194364 %)
[2024-05-15 11:58:18] 2024-05-15 09:57:56,953 | INFO     | model: linear, x: [1715757707.0, 1715757768.0, 1715757829.0, 1715757890.0, 1715757951.0, 1715758012.0, 1715758073.0, 1715758134.0, 1715758195.0, 1715758256.0, 1715
[2024-05-15 11:58:18] 2024-05-15 09:57:56,954 | INFO     | sum of square deviations: 1132458442.5
[2024-05-15 11:58:18] 2024-05-15 09:57:56,954 | INFO     | sum of deviations: -9671987461.5
[2024-05-15 11:58:18] 2024-05-15 09:57:56,955 | INFO     | mean x: 1715762373.5
[2024-05-15 11:58:18] 2024-05-15 09:57:56,955 | INFO     | mean y: 2339345.422077922
[2024-05-15 11:58:18] 2024-05-15 09:57:56,955 | INFO     | -- intersect: 14656150505.830711
[2024-05-15 11:58:18] 2024-05-15 09:57:56,955 | INFO     | intersect: 14656150505.830711
[2024-05-15 11:58:18] 2024-05-15 09:57:56,955 | INFO     | chi2: 0.8953990141497328
[2024-05-15 11:58:18] 2024-05-15 09:57:56,955 | INFO     | current chi2=0.8953990141497328 (change=7.658662210248914 %)
[2024-05-15 11:58:18] 2024-05-15 09:57:56,955 | INFO     | left removable region: 30
[2024-05-15 11:58:18] 2024-05-15 09:57:56,956 | INFO     | model: linear, x: [1715758622.0, 1715758683.0, 1715758744.0, 1715758805.0, 1715758866.0, 1715758927.0, 1715758988.0, 1715759049.0, 1715759110.0, 1715759171.0, 1715
[2024-05-15 11:58:18] 2024-05-15 09:57:56,956 | INFO     | sum of square deviations: 729472282.0
[2024-05-15 11:58:18] 2024-05-15 09:57:56,956 | INFO     | sum of deviations: 179887963.0000001
[2024-05-15 11:58:18] 2024-05-15 09:57:56,957 | INFO     | mean x: 1715762648.0
[2024-05-15 11:58:18] 2024-05-15 09:57:56,957 | INFO     | mean y: 2353896.736842105
[2024-05-15 11:58:18] 2024-05-15 09:57:56,957 | INFO     | -- intersect: -420753403.370561
[2024-05-15 11:58:18] 2024-05-15 09:57:56,957 | INFO     | intersect: -420753403.370561
[2024-05-15 11:58:18] 2024-05-15 09:57:56,957 | INFO     | chi2: 0.0002063673989432536
[2024-05-15 11:58:18] 2024-05-15 09:57:56,957 | INFO     | -- intersect: -420753403.370561
[2024-05-15 11:58:18] 2024-05-15 09:57:56,957 | INFO     | current memory leak: 0.25 B/s (using 133 data points, chi2=0.00)
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | ..............................
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | . Timing measurements:
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | . get job = 0 s
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | . initial setup = 1 s
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | . payload setup = 6 s
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | . stage-in = 0 s
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | . payload execution = 10278 s
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | . stage-out = 0 s
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | . log creation = 0 s
[2024-05-15 11:58:18] 2024-05-15 09:57:56,958 | INFO     | ..............................
[2024-05-15 11:58:18] 2024-05-15 09:57:57,107 | INFO     | 
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | job summary report
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | --------------------------------------------------
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | PanDA job id: 6205834335
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | task id: 38776125
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | errors: (none)
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | pilot state: finished 
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | transexitcode: 0
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | exeerrorcode: 0
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | exeerrordiag: 
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | exitcode: 0
[2024-05-15 11:58:18] 2024-05-15 09:57:57,108 | INFO     | exitmsg: OK
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | cpuconsumptiontime: 38436 s
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | nevents: 400
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | neventsw: 0
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | pid: 3832282
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | pgrp: 3832282
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | corecount: 4
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | event service: False
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | sizes: {0: 2394347, 1: 2394546, 6: 2394752, 12: 2394780, 10289: 2423585, 10291: 2432751, 10297: 2432865}
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | --------------------------------------------------
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | 
[2024-05-15 11:58:18] 2024-05-15 09:57:57,109 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-05-15 11:58:18] 2024-05-15 09:57:57,132 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,132 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,132 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,132 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,134 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 11:58:18] 2024-05-15 09:57:57,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,134 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 11:58:18] 2024-05-15 09:57:57,134 | INFO     | job 6205834335 has completed (purged errors)
[2024-05-15 11:58:18] 2024-05-15 09:57:57,134 | INFO     | overall cleanup function is called
[2024-05-15 11:58:18] 2024-05-15 09:57:58,142 | INFO     | --- collectZombieJob: --- 10, [3832282]
[2024-05-15 11:58:18] 2024-05-15 09:57:58,142 | INFO     | zombie collector waiting for pid 3832282
[2024-05-15 11:58:18] 2024-05-15 09:57:58,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 11:58:18] 2024-05-15 09:57:59,147 | INFO     | collected zombie processes
[2024-05-15 11:58:18] 2024-05-15 09:57:59,147 | INFO     | will now attempt to kill all subprocesses of pid=3832282
[2024-05-15 11:58:18] 2024-05-15 09:57:59,340 | INFO     | process IDs to be killed: [3832282] (in reverse order)
[2024-05-15 11:58:18] 2024-05-15 09:57:59,537 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 11:58:18] 2024-05-15 09:57:59,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 11:58:18] 2024-05-15 09:57:59,550 | INFO     | did not find any defunct processes belonging to 3832282
[2024-05-15 11:58:18] 2024-05-15 09:57:59,561 | INFO     | did not find any defunct processes belonging to 3832282
[2024-05-15 11:58:18] 2024-05-15 09:57:59,561 | INFO     | ready for new job
[2024-05-15 11:58:18] 2024-05-15 09:57:59,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 11:58:18] 2024-05-15 09:57:59,563 | INFO     | *************************************
[2024-05-15 11:58:18] 2024-05-15 09:57:59,563 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 11:58:18] 2024-05-15 09:57:59,563 | INFO     | *************************************
[2024-05-15 11:58:18] 2024-05-15 09:57:59,563 | INFO     | 
[2024-05-15 11:58:18] 2024-05-15 09:57:59,570 | INFO     | architecture information:
[2024-05-15 11:58:18] 2024-05-15 09:57:59,570 | INFO     | executing command: cat /etc/os-release
[2024-05-15 11:58:18] 2024-05-15 09:57:59,585 | INFO     | cat /etc/os-release:
[2024-05-15 11:58:18] NAME="CentOS Linux"
[2024-05-15 11:58:18] VERSION="7 (Core)"
[2024-05-15 11:58:18] ID="centos"
[2024-05-15 11:58:18] ID_LIKE="rhel fedora"
[2024-05-15 11:58:18] VERSION_ID="7"
[2024-05-15 11:58:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 11:58:18] ANSI_COLOR="0;31"
[2024-05-15 11:58:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 11:58:18] HOME_URL="https://www.centos.org/"
[2024-05-15 11:58:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 11:58:18] 
[2024-05-15 11:58:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 11:58:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 11:58:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 11:58:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 11:58:18] 
[2024-05-15 11:58:18] 2024-05-15 09:57:59,585 | INFO     | *************************************
[2024-05-15 11:58:18] 2024-05-15 09:58:00,088 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-05-15 11:58:18] 2024-05-15 09:58:00,107 | INFO     | sufficient remaining disk space (3007674580992 B)
[2024-05-15 11:58:18] 2024-05-15 09:58:00,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 11:58:18] 2024-05-15 09:58:00,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 11:58:18] 2024-05-15 09:58:00,108 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 11:58:18] 2024-05-15 09:58:00,108 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 11:58:18] 2024-05-15 09:58:00,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 11:58:18] 2024-05-15 09:58:00,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 11:58:18] 2024-05-15 09:58:00,559 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-15 11:58:18] 2024-05-15 09:58:00,560 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-15 11:58:18] 2024-05-15 09:58:00,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:58:18] 2024-05-15 09:58:00,560 | INFO     | will abort loop
[2024-05-15 11:58:18] 2024-05-15 09:58:00,783 | INFO     | all payload control threads have been joined
[2024-05-15 11:58:18] 2024-05-15 09:58:00,785 | INFO     | all job control threads have been joined
[2024-05-15 11:58:18] 2024-05-15 09:58:00,819 | INFO     | all data control threads have been joined
[2024-05-15 11:58:18] 2024-05-15 09:58:01,113 | INFO     | [job] retrieve thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:01,114 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:01,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 11:58:18] 2024-05-15 09:58:01,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 11:58:18] 2024-05-15 09:58:01,469 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:01,565 | INFO     | [job] job monitor thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:01,569 | INFO     | [payload] failed_post thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:01,606 | INFO     | [data] copytool_in thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:01,690 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:01,788 | INFO     | [payload] control thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:01,790 | INFO     | [job] control thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:01,824 | INFO     | [data] control thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:02,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:58:18] 2024-05-15 09:58:02,479 | INFO     | [job] validate thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:02,552 | INFO     | [payload] validate_post thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:03,053 | INFO     | [job] queue monitor thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:03,342 | INFO     | [data] copytool_out thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:05,409 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:10,293 | INFO     | job.realtimelogging is not enabled
[2024-05-15 11:58:18] 2024-05-15 09:58:11,294 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 11:58:18] 2024-05-15 09:58:12,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47032474772544)>', '<ExcThread(monitor, started 47033062815488)>']
[2024-05-15 11:58:18] 2024-05-15 09:58:13,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 11:58:18] 2024-05-15 09:58:13,173 | INFO     | [monitor] control thread has ended
[2024-05-15 11:58:18] 2024-05-15 09:58:17,941 | INFO     | all workflow threads have been joined
[2024-05-15 11:58:18] 2024-05-15 09:58:17,942 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 11:58:18] 2024-05-15 09:58:17,942 | INFO     | traces error code: 0
[2024-05-15 11:58:18] 2024-05-15 09:58:17,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 11:58:18] 2024-05-15 09:58:18,007 [wrapper] ==== pilot stdout END ====
[2024-05-15 11:58:18] 2024-05-15 09:58:18,009 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 11:58:18] 2024-05-15 09:58:18,011 [wrapper] pilotpid: 3824419
[2024-05-15 11:58:18] 2024-05-15 09:58:18,012 [wrapper] Pilot exit status: 0
[2024-05-15 11:58:18] 2024-05-15 09:58:18,020 [wrapper] pandaids: 6205834335
[2024-05-15 11:58:18] 2024-05-15 09:58:18,104 [wrapper] cleanup: SIGTERM to supervisor_pilot  489471 3824420
[2024-05-15 11:58:18] 2024-05-15 09:58:18,107 [wrapper] Test setup, not cleaning
[2024-05-15 11:58:18] 2024-05-15 09:58:18,109 [wrapper] ==== wrapper stdout END ====
[2024-05-15 11:58:18] 2024-05-15 09:58:18,111 [wrapper] ==== wrapper stderr END ====
[2024-05-15 11:58:18] 2024-05-15 09:58:18,114 [wrapper] apfmon messages muted
[2024-05-15 11:58:18]  *** Error codes and diagnostics ***
[2024-05-15 11:58:18]     "exeErrorCode": 0,
[2024-05-15 11:58:18]     "exeErrorDiag": "",
[2024-05-15 11:58:18]     "pilotErrorCode": 0,
[2024-05-15 11:58:18]     "pilotErrorDiag": "",
[2024-05-15 11:58:18]  *** Listing of results directory ***
[2024-05-15 11:58:18] total 833324
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc    467845 May 13 14:02 pilot3.tar.gz
[2024-05-15 11:58:18] -rwx------ 1 boinc boinc     32251 May 13 14:06 runpilot2-wrapper.sh
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc      5633 May 13 14:06 queuedata.json
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc       100 May 15 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 11:58:18] -rwxr-xr-x 1 boinc boinc      7986 May 15 09:05 run_atlas
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc       105 May 15 09:05 job.xml
[2024-05-15 11:58:18] -rw-r--r-- 2 boinc boinc 602865400 May 15 09:05 EVNT.38776119._000195.pool.root.1
[2024-05-15 11:58:18] -rw-r--r-- 2 boinc boinc     17537 May 15 09:05 start_atlas.sh
[2024-05-15 11:58:18] drwxrwx--x 2 boinc boinc      4096 May 15 09:05 shared
[2024-05-15 11:58:18] -rw-r--r-- 2 boinc boinc    480009 May 15 09:05 input.tar.gz
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc      6642 May 15 09:05 init_data.xml
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc         0 May 15 09:05 boinc_lockfile
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc      2640 May 15 09:05 pandaJob.out
[2024-05-15 11:58:18] -rw------- 1 boinc boinc       424 May 15 09:05 setup.sh.local
[2024-05-15 11:58:18] -rw------- 1 boinc boinc   1007426 May 15 09:06 agis_schedconf.cvmfs.json
[2024-05-15 11:58:18] -rw------- 1 boinc boinc         0 May 15 09:06 agis_ddmendpoints.agis.ALL.json
[2024-05-15 11:58:18] -rw------- 1 boinc boinc   1324588 May 15 09:06 cric_ddmendpoints.json
[2024-05-15 11:58:18] drwx------ 4 boinc boinc      4096 May 15 09:06 pilot3
[2024-05-15 11:58:18] -rw------- 1 boinc boinc 244212121 May 15 11:57 HITS.38776125._004776.pool.root.1
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc       531 May 15 11:57 boinc_task_state.xml
[2024-05-15 11:58:18] -rw------- 1 boinc boinc        95 May 15 11:57 pilot_heartbeat.json
[2024-05-15 11:58:18] -rw------- 1 boinc boinc      1042 May 15 11:57 memory_monitor_summary.json
[2024-05-15 11:58:18] -rw------- 1 boinc boinc    296927 May 15 11:57 log.38776125._004776.job.log.tgz.1
[2024-05-15 11:58:18] -rw------- 1 boinc boinc      7719 May 15 11:57 heartbeat.json
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc      8192 May 15 11:58 boinc_mmap_file
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc        28 May 15 11:58 wrapper_checkpoint.txt
[2024-05-15 11:58:18] -rw------- 1 boinc boinc      4603 May 15 11:58 pilotlog.txt
[2024-05-15 11:58:18] -rw------- 1 boinc boinc   1063882 May 15 11:58 log.38776125._004776.job.log.1
[2024-05-15 11:58:18] -rw------- 1 boinc boinc       357 May 15 11:58 output.list
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc       620 May 15 11:58 runtime_log
[2024-05-15 11:58:18] -rw------- 1 boinc boinc   1382400 May 15 11:58 result.tar.gz
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc     11410 May 15 11:58 runtime_log.err
[2024-05-15 11:58:18] -rw------- 1 boinc boinc       658 May 15 11:58 npdMDmccjQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDmJJXKDmeiE76m.diag
[2024-05-15 11:58:18] -rw-r--r-- 1 boinc boinc     21360 May 15 11:58 stderr.txt
[2024-05-15 11:58:18] HITS file was successfully produced:
[2024-05-15 11:58:18] -rw------- 1 boinc boinc 244212121 May 15 11:57 shared/HITS.pool.root.1
[2024-05-15 11:58:18]  *** Contents of shared directory: ***
[2024-05-15 11:58:18] total 829080
[2024-05-15 11:58:18] -rw-r--r-- 2 boinc boinc 602865400 May 15 09:05 ATLAS.root_0
[2024-05-15 11:58:18] -rw-r--r-- 2 boinc boinc     17537 May 15 09:05 start_atlas.sh
[2024-05-15 11:58:18] -rw-r--r-- 2 boinc boinc    480009 May 15 09:05 input.tar.gz
[2024-05-15 11:58:18] -rw------- 1 boinc boinc 244212121 May 15 11:57 HITS.pool.root.1
[2024-05-15 11:58:18] -rw------- 1 boinc boinc   1382400 May 15 11:58 result.tar.gz
11:58:20 (3819546): run_atlas exited; CPU time 38213.654461
11:58:20 (3819546): called boinc_finish(0)

</stderr_txt>
]]>

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