Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:28:53 (1541958): wrapper (7.7.26015): starting
07:28:53 (1541958): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 07:28:53] Arguments: --nthreads 4
[2024-05-16 07:28:53] Threads: 4
[2024-05-16 07:28:53] Checking for CVMFS
[2024-05-16 07:28:53] No cvmfs_config command found, will try listing directly
[2024-05-16 07:28:53] CVMFS is ok
[2024-05-16 07:28:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 07:28:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 07:28:53] Further information can be found at the LHC@home message board.
[2024-05-16 07:28:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 07:28:53] Checking for apptainer binary...
[2024-05-16 07:28:53] which: no apptainer in ((null))
[2024-05-16 07:28:53] apptainer is not installed, using version from CVMFS
[2024-05-16 07:28:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 07:28:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-16 07:28:54] apptainer works
[2024-05-16 07:28:54] Set ATHENA_PROC_NUMBER=4
[2024-05-16 07:28:54] Set ATHENA_CORE_NUMBER=4
[2024-05-16 07:28:54] Starting ATLAS job with PandaID=6205834157
[2024-05-16 07:28:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 10:53:52]  *** The last 200 lines of the pilot log: ***
[2024-05-16 10:53:52] 2024-05-16 08:53:36,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 10:53:52] 2024-05-16 08:53:36,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 10:53:52] 2024-05-16 08:53:36,044 | INFO     | fitting pss+swap vs Time
[2024-05-16 10:53:52] 2024-05-16 08:53:36,044 | INFO     | model: linear, x: [1715837382.0, 1715837443.0, 1715837504.0, 1715837565.0, 1715837626.0, 1715837687.0, 1715837748.0, 1715837809.0, 1715837870.0, 1715837931.0, 1715
[2024-05-16 10:53:52] 2024-05-16 08:53:36,044 | INFO     | sum of square deviations: 2518000700.0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,046 | INFO     | sum of deviations: 76328303382.0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,046 | INFO     | mean x: 1715843482.0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,046 | INFO     | mean y: 2263488.472636816
[2024-05-16 10:53:52] 2024-05-16 08:53:36,046 | INFO     | -- intersect: -52010200944.171585
[2024-05-16 10:53:52] 2024-05-16 08:53:36,046 | INFO     | intersect: -52010200944.171585
[2024-05-16 10:53:52] 2024-05-16 08:53:36,046 | INFO     | chi2: 4.9118035217903495
[2024-05-16 10:53:52] 2024-05-16 08:53:36,046 | INFO     | model: linear, x: [1715837382.0, 1715837443.0, 1715837504.0, 1715837565.0, 1715837626.0, 1715837687.0, 1715837748.0, 1715837809.0, 1715837870.0, 1715837931.0, 1715
[2024-05-16 10:53:52] 2024-05-16 08:53:36,047 | INFO     | sum of square deviations: 2334722845.0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,048 | INFO     | sum of deviations: 86951963220.00002
[2024-05-16 10:53:52] 2024-05-16 08:53:36,048 | INFO     | mean x: 1715843329.5
[2024-05-16 10:53:52] 2024-05-16 08:53:36,048 | INFO     | mean y: 2272112.56122449
[2024-05-16 10:53:52] 2024-05-16 08:53:36,048 | INFO     | -- intersect: -63900793040.32478
[2024-05-16 10:53:52] 2024-05-16 08:53:36,048 | INFO     | intersect: -63900793040.32478
[2024-05-16 10:53:52] 2024-05-16 08:53:36,048 | INFO     | chi2: 4.1131646274662845
[2024-05-16 10:53:52] 2024-05-16 08:53:36,048 | INFO     | current chi2=4.1131646274662845 (change=16.259585522528425 %)
[2024-05-16 10:53:52] 2024-05-16 08:53:36,048 | INFO     | right removable region: 195
[2024-05-16 10:53:52] 2024-05-16 08:53:36,049 | INFO     | model: linear, x: [1715837687.0, 1715837748.0, 1715837809.0, 1715837870.0, 1715837931.0, 1715837992.0, 1715838053.0, 1715838114.0, 1715838175.0, 1715838236.0, 1715
[2024-05-16 10:53:52] 2024-05-16 08:53:36,049 | INFO     | sum of square deviations: 2334722845.0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,050 | INFO     | sum of deviations: 30217882563.99998
[2024-05-16 10:53:52] 2024-05-16 08:53:36,050 | INFO     | mean x: 1715843634.5
[2024-05-16 10:53:52] 2024-05-16 08:53:36,050 | INFO     | mean y: 2301748.5306122447
[2024-05-16 10:53:52] 2024-05-16 08:53:36,050 | INFO     | -- intersect: -22205542560.07635
[2024-05-16 10:53:52] 2024-05-16 08:53:36,050 | INFO     | intersect: -22205542560.07635
[2024-05-16 10:53:52] 2024-05-16 08:53:36,051 | INFO     | chi2: 2.4177670169696004
[2024-05-16 10:53:52] 2024-05-16 08:53:36,051 | INFO     | current chi2=2.4177670169696004 (change=50.77638984858406 %)
[2024-05-16 10:53:52] 2024-05-16 08:53:36,051 | INFO     | model: linear, x: [1715837992.0, 1715838053.0, 1715838114.0, 1715838175.0, 1715838236.0, 1715838297.0, 1715838358.0, 1715838419.0, 1715838480.0, 1715838541.0, 1715
[2024-05-16 10:53:52] 2024-05-16 08:53:36,051 | INFO     | sum of square deviations: 2160561440.0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,052 | INFO     | sum of deviations: -7324840227.999999
[2024-05-16 10:53:52] 2024-05-16 08:53:36,052 | INFO     | mean x: 1715843787.0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,052 | INFO     | mean y: 2334628.22513089
[2024-05-16 10:53:52] 2024-05-16 08:53:36,052 | INFO     | -- intersect: 5819471490.568403
[2024-05-16 10:53:52] 2024-05-16 08:53:36,052 | INFO     | intersect: 5819471490.568403
[2024-05-16 10:53:52] 2024-05-16 08:53:36,053 | INFO     | chi2: 0.9043253624589197
[2024-05-16 10:53:52] 2024-05-16 08:53:36,053 | INFO     | current chi2=0.9043253624589197 (change=62.596670559581455 %)
[2024-05-16 10:53:52] 2024-05-16 08:53:36,053 | INFO     | model: linear, x: [1715838297.0, 1715838358.0, 1715838419.0, 1715838480.0, 1715838541.0, 1715838602.0, 1715838663.0, 1715838724.0, 1715838785.0, 1715838846.0, 1715
[2024-05-16 10:53:52] 2024-05-16 08:53:36,053 | INFO     | sum of square deviations: 1995283922.5
[2024-05-16 10:53:52] 2024-05-16 08:53:36,054 | INFO     | sum of deviations: -12312177841.000002
[2024-05-16 10:53:52] 2024-05-16 08:53:36,054 | INFO     | mean x: 1715843939.5
[2024-05-16 10:53:52] 2024-05-16 08:53:36,054 | INFO     | mean y: 2339167.1720430106
[2024-05-16 10:53:52] 2024-05-16 08:53:36,054 | INFO     | -- intersect: 10590193603.47523
[2024-05-16 10:53:52] 2024-05-16 08:53:36,054 | INFO     | intersect: 10590193603.47523
[2024-05-16 10:53:52] 2024-05-16 08:53:36,055 | INFO     | chi2: 0.8470183507585646
[2024-05-16 10:53:52] 2024-05-16 08:53:36,055 | INFO     | current chi2=0.8470183507585646 (change=6.336990432794412 %)
[2024-05-16 10:53:52] 2024-05-16 08:53:36,055 | INFO     | left removable region: 30
[2024-05-16 10:53:52] 2024-05-16 08:53:36,055 | INFO     | model: linear, x: [1715839212.0, 1715839273.0, 1715839334.0, 1715839395.0, 1715839456.0, 1715839517.0, 1715839578.0, 1715839639.0, 1715839700.0, 1715839761.0, 1715
[2024-05-16 10:53:52] 2024-05-16 08:53:36,055 | INFO     | sum of square deviations: 1392881930.0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,056 | INFO     | sum of deviations: 1288406497.9999993
[2024-05-16 10:53:52] 2024-05-16 08:53:36,056 | INFO     | mean x: 1715844214.0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,056 | INFO     | mean y: 2348731.290909091
[2024-05-16 10:53:52] 2024-05-16 08:53:36,056 | INFO     | -- intersect: -1584795726.0094316
[2024-05-16 10:53:52] 2024-05-16 08:53:36,056 | INFO     | intersect: -1584795726.0094316
[2024-05-16 10:53:52] 2024-05-16 08:53:36,057 | INFO     | chi2: 0.00366503122123483
[2024-05-16 10:53:52] 2024-05-16 08:53:36,057 | INFO     | -- intersect: -1584795726.0094316
[2024-05-16 10:53:52] 2024-05-16 08:53:36,057 | INFO     | current memory leak: 0.92 B/s (using 165 data points, chi2=0.00)
[2024-05-16 10:53:52] 2024-05-16 08:53:36,057 | INFO     | ..............................
[2024-05-16 10:53:52] 2024-05-16 08:53:36,057 | INFO     | . Timing measurements:
[2024-05-16 10:53:52] 2024-05-16 08:53:36,057 | INFO     | . get job = 0 s
[2024-05-16 10:53:52] 2024-05-16 08:53:36,057 | INFO     | . initial setup = 1 s
[2024-05-16 10:53:52] 2024-05-16 08:53:36,057 | INFO     | . payload setup = 10 s
[2024-05-16 10:53:52] 2024-05-16 08:53:36,057 | INFO     | . stage-in = 0 s
[2024-05-16 10:53:52] 2024-05-16 08:53:36,058 | INFO     | . payload execution = 12230 s
[2024-05-16 10:53:52] 2024-05-16 08:53:36,058 | INFO     | . stage-out = 0 s
[2024-05-16 10:53:52] 2024-05-16 08:53:36,058 | INFO     | . log creation = 0 s
[2024-05-16 10:53:52] 2024-05-16 08:53:36,058 | INFO     | ..............................
[2024-05-16 10:53:52] 2024-05-16 08:53:36,141 | INFO     | 
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | job summary report
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | --------------------------------------------------
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | PanDA job id: 6205834157
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | task id: 38776125
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | errors: (none)
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | pilot state: finished 
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | transexitcode: 0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | exeerrorcode: 0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,142 | INFO     | exeerrordiag: 
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | exitcode: 0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | exitmsg: OK
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | cpuconsumptiontime: 45876 s
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | nevents: 400
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | neventsw: 0
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | pid: 1556821
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | pgrp: 1556821
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | corecount: 4
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | event service: False
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | sizes: {0: 2392154, 5: 2392360, 11: 2392416, 12244: 2422113, 12245: 2431151, 12250: 2431265}
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | --------------------------------------------------
[2024-05-16 10:53:52] 2024-05-16 08:53:36,143 | INFO     | 
[2024-05-16 10:53:52] 2024-05-16 08:53:36,144 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/1
[2024-05-16 10:53:52] 2024-05-16 08:53:36,171 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,173 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 10:53:52] 2024-05-16 08:53:36,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,173 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 10:53:52] 2024-05-16 08:53:36,173 | INFO     | job 6205834157 has completed (purged errors)
[2024-05-16 10:53:52] 2024-05-16 08:53:36,173 | INFO     | overall cleanup function is called
[2024-05-16 10:53:52] 2024-05-16 08:53:37,180 | INFO     | --- collectZombieJob: --- 10, [1556821]
[2024-05-16 10:53:52] 2024-05-16 08:53:37,180 | INFO     | zombie collector waiting for pid 1556821
[2024-05-16 10:53:52] 2024-05-16 08:53:37,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 10:53:52] 2024-05-16 08:53:38,185 | INFO     | collected zombie processes
[2024-05-16 10:53:52] 2024-05-16 08:53:38,185 | INFO     | will now attempt to kill all subprocesses of pid=1556821
[2024-05-16 10:53:52] 2024-05-16 08:53:38,486 | INFO     | process IDs to be killed: [1556821] (in reverse order)
[2024-05-16 10:53:52] 2024-05-16 08:53:38,659 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 10:53:52] 2024-05-16 08:53:38,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 10:53:52] 2024-05-16 08:53:38,675 | INFO     | did not find any defunct processes belonging to 1556821
[2024-05-16 10:53:52] 2024-05-16 08:53:38,690 | INFO     | did not find any defunct processes belonging to 1556821
[2024-05-16 10:53:52] 2024-05-16 08:53:38,691 | INFO     | ready for new job
[2024-05-16 10:53:52] 2024-05-16 08:53:38,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 10:53:52] 2024-05-16 08:53:38,693 | INFO     | *************************************
[2024-05-16 10:53:52] 2024-05-16 08:53:38,693 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 10:53:52] 2024-05-16 08:53:38,693 | INFO     | *************************************
[2024-05-16 10:53:52] 2024-05-16 08:53:38,693 | INFO     | 
[2024-05-16 10:53:52] 2024-05-16 08:53:38,699 | INFO     | architecture information:
[2024-05-16 10:53:52] 2024-05-16 08:53:38,699 | INFO     | executing command: cat /etc/os-release
[2024-05-16 10:53:52] 2024-05-16 08:53:38,717 | INFO     | cat /etc/os-release:
[2024-05-16 10:53:52] NAME="CentOS Linux"
[2024-05-16 10:53:52] VERSION="7 (Core)"
[2024-05-16 10:53:52] ID="centos"
[2024-05-16 10:53:52] ID_LIKE="rhel fedora"
[2024-05-16 10:53:52] VERSION_ID="7"
[2024-05-16 10:53:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 10:53:52] ANSI_COLOR="0;31"
[2024-05-16 10:53:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 10:53:52] HOME_URL="https://www.centos.org/"
[2024-05-16 10:53:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 10:53:52] 
[2024-05-16 10:53:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 10:53:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 10:53:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 10:53:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 10:53:52] 
[2024-05-16 10:53:52] 2024-05-16 08:53:38,717 | INFO     | *************************************
[2024-05-16 10:53:52] 2024-05-16 08:53:39,220 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/1
[2024-05-16 10:53:52] 2024-05-16 08:53:39,241 | INFO     | sufficient remaining disk space (2953054257152 B)
[2024-05-16 10:53:52] 2024-05-16 08:53:39,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 10:53:52] 2024-05-16 08:53:39,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 10:53:52] 2024-05-16 08:53:39,242 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 10:53:52] 2024-05-16 08:53:39,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 10:53:52] 2024-05-16 08:53:39,243 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 10:53:52] 2024-05-16 08:53:39,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 10:53:52] 2024-05-16 08:53:39,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 10:53:52] 2024-05-16 08:53:39,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 10:53:52] 2024-05-16 08:53:39,250 | INFO     | aborting loop
[2024-05-16 10:53:52] 2024-05-16 08:53:39,617 | INFO     | all job control threads have been joined
[2024-05-16 10:53:52] 2024-05-16 08:53:39,828 | INFO     | all payload control threads have been joined
[2024-05-16 10:53:52] 2024-05-16 08:53:40,223 | INFO     | all data control threads have been joined
[2024-05-16 10:53:52] 2024-05-16 08:53:40,247 | INFO     | [job] retrieve thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:40,255 | INFO     | [job] job monitor thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:40,302 | INFO     | [job] validate thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:40,311 | INFO     | [payload] validate_post thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:40,324 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:40,412 | INFO     | [payload] failed_post thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:40,622 | INFO     | [job] control thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:40,715 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:40,733 | INFO     | [data] copytool_in thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:40,833 | INFO     | [payload] control thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:41,126 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:41,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 10:53:52] 2024-05-16 08:53:41,228 | INFO     | [data] control thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:41,231 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:41,248 | INFO     | [data] copytool_out thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:41,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 10:53:52] 2024-05-16 08:53:42,153 | INFO     | [job] queue monitor thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:45,276 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 10:53:52] 2024-05-16 08:53:46,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47341967721536)>', '<ExcThread(monitor, started 47342138971904)>']
[2024-05-16 10:53:52] 2024-05-16 08:53:47,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 10:53:52] 2024-05-16 08:53:47,283 | INFO     | [monitor] control thread has ended
[2024-05-16 10:53:52] 2024-05-16 08:53:51,578 | INFO     | all workflow threads have been joined
[2024-05-16 10:53:52] 2024-05-16 08:53:51,578 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 10:53:52] 2024-05-16 08:53:51,578 | INFO     | traces error code: 0
[2024-05-16 10:53:52] 2024-05-16 08:53:51,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 10:53:52] 2024-05-16 08:53:51,643 [wrapper] ==== pilot stdout END ====
[2024-05-16 10:53:52] 2024-05-16 08:53:51,646 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 10:53:52] 2024-05-16 08:53:51,648 [wrapper] pilotpid: 1546719
[2024-05-16 10:53:52] 2024-05-16 08:53:51,656 [wrapper] Pilot exit status: 0
[2024-05-16 10:53:52] 2024-05-16 08:53:51,672 [wrapper] pandaids: 6205834157
[2024-05-16 10:53:52] 2024-05-16 08:53:51,806 [wrapper] cleanup: SIGTERM to supervisor_pilot 2409833 1546720
[2024-05-16 10:53:52] 2024-05-16 08:53:51,809 [wrapper] Test setup, not cleaning
[2024-05-16 10:53:52] 2024-05-16 08:53:51,812 [wrapper] ==== wrapper stdout END ====
[2024-05-16 10:53:52] 2024-05-16 08:53:51,814 [wrapper] ==== wrapper stderr END ====
[2024-05-16 10:53:52] 2024-05-16 08:53:51,818 [wrapper] apfmon messages muted
[2024-05-16 10:53:52]  *** Error codes and diagnostics ***
[2024-05-16 10:53:52]     "exeErrorCode": 0,
[2024-05-16 10:53:52]     "exeErrorDiag": "",
[2024-05-16 10:53:52]     "pilotErrorCode": 0,
[2024-05-16 10:53:52]     "pilotErrorDiag": "",
[2024-05-16 10:53:52]  *** Listing of results directory ***
[2024-05-16 10:53:52] total 837712
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc    467845 May 13 13:48 pilot3.tar.gz
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc      5633 May 13 13:50 queuedata.json
[2024-05-16 10:53:52] -rwx------ 1 boinc boinc     32251 May 13 13:50 runpilot2-wrapper.sh
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc       100 May 16 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 10:53:52] -rwxr-xr-x 1 boinc boinc      7986 May 16 07:28 run_atlas
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc       105 May 16 07:28 job.xml
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc      6644 May 16 07:28 init_data.xml
[2024-05-16 10:53:52] -rw-r--r-- 2 boinc boinc 601653028 May 16 07:28 EVNT.38776119._000180.pool.root.1
[2024-05-16 10:53:52] -rw-r--r-- 2 boinc boinc     17537 May 16 07:28 start_atlas.sh
[2024-05-16 10:53:52] drwxrwx--x 2 boinc boinc      4096 May 16 07:28 shared
[2024-05-16 10:53:52] -rw-r--r-- 2 boinc boinc    480006 May 16 07:28 input.tar.gz
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc         0 May 16 07:28 boinc_lockfile
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc      2632 May 16 07:28 pandaJob.out
[2024-05-16 10:53:52] -rw------- 1 boinc boinc       424 May 16 07:28 setup.sh.local
[2024-05-16 10:53:52] -rw------- 1 boinc boinc   1010627 May 16 07:29 agis_schedconf.cvmfs.json
[2024-05-16 10:53:52] -rw------- 1 boinc boinc   1324701 May 16 07:29 cric_ddmendpoints.json
[2024-05-16 10:53:52] drwx------ 4 boinc boinc      4096 May 16 07:29 pilot3
[2024-05-16 10:53:52] -rw------- 1 boinc boinc        95 May 16 10:52 pilot_heartbeat.json
[2024-05-16 10:53:52] -rw------- 1 boinc boinc 249476761 May 16 10:52 HITS.38776125._004606.pool.root.1
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc       532 May 16 10:53 boinc_task_state.xml
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc      8192 May 16 10:53 boinc_mmap_file
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc        28 May 16 10:53 wrapper_checkpoint.txt
[2024-05-16 10:53:52] -rw------- 1 boinc boinc      1041 May 16 10:53 memory_monitor_summary.json
[2024-05-16 10:53:52] -rw------- 1 boinc boinc         0 May 16 10:53 agis_ddmendpoints.agis.ALL.json
[2024-05-16 10:53:52] -rw------- 1 boinc boinc    324014 May 16 10:53 log.38776125._004606.job.log.tgz.1
[2024-05-16 10:53:52] -rw------- 1 boinc boinc      7713 May 16 10:53 heartbeat.json
[2024-05-16 10:53:52] -rw------- 1 boinc boinc      4345 May 16 10:53 pilotlog.txt
[2024-05-16 10:53:52] -rw------- 1 boinc boinc   1259505 May 16 10:53 log.38776125._004606.job.log.1
[2024-05-16 10:53:52] -rw------- 1 boinc boinc       357 May 16 10:53 output.list
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc       620 May 16 10:53 runtime_log
[2024-05-16 10:53:52] -rw------- 1 boinc boinc   1597440 May 16 10:53 result.tar.gz
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc     11410 May 16 10:53 runtime_log.err
[2024-05-16 10:53:52] -rw------- 1 boinc boinc       657 May 16 10:53 DyKLDmfNjQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmEcKKDmP3CHKo.diag
[2024-05-16 10:53:52] -rw-r--r-- 1 boinc boinc     21324 May 16 10:53 stderr.txt
[2024-05-16 10:53:52] HITS file was successfully produced:
[2024-05-16 10:53:52] -rw------- 1 boinc boinc 249476761 May 16 10:52 shared/HITS.pool.root.1
[2024-05-16 10:53:52]  *** Contents of shared directory: ***
[2024-05-16 10:53:52] total 833244
[2024-05-16 10:53:52] -rw-r--r-- 2 boinc boinc 601653028 May 16 07:28 ATLAS.root_0
[2024-05-16 10:53:52] -rw-r--r-- 2 boinc boinc     17537 May 16 07:28 start_atlas.sh
[2024-05-16 10:53:52] -rw-r--r-- 2 boinc boinc    480006 May 16 07:28 input.tar.gz
[2024-05-16 10:53:52] -rw------- 1 boinc boinc 249476761 May 16 10:52 HITS.pool.root.1
[2024-05-16 10:53:52] -rw------- 1 boinc boinc   1597440 May 16 10:53 result.tar.gz
10:53:53 (1541958): run_atlas exited; CPU time 45570.237482
10:53:53 (1541958): called boinc_finish(0)

</stderr_txt>
]]>

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