Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:37:45 (1685237): wrapper (7.7.26015): starting
23:37:45 (1685237): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 23:37:45] Arguments: --nthreads 4
[2024-05-15 23:37:45] Threads: 4
[2024-05-15 23:37:45] Checking for CVMFS
[2024-05-15 23:37:45] No cvmfs_config command found, will try listing directly
[2024-05-15 23:37:45] CVMFS is ok
[2024-05-15 23:37:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 23:37:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 23:37:45] Further information can be found at the LHC@home message board.
[2024-05-15 23:37:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 23:37:45] Checking for apptainer binary...
[2024-05-15 23:37:45] which: no apptainer in ((null))
[2024-05-15 23:37:45] apptainer is not installed, using version from CVMFS
[2024-05-15 23:37:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 23:37:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-05-15 23:37:46] apptainer works
[2024-05-15 23:37:46] Set ATHENA_PROC_NUMBER=4
[2024-05-15 23:37:46] Set ATHENA_CORE_NUMBER=4
[2024-05-15 23:37:46] Starting ATLAS job with PandaID=6205833746
[2024-05-15 23:37:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 03:08:09]  *** The last 200 lines of the pilot log: ***
[2024-05-16 03:08:09] 2024-05-16 01:07:53,891 | WARNING  | GPU info not found in prmon json
[2024-05-16 03:08:09] 2024-05-16 01:07:53,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 03:08:09] 2024-05-16 01:07:53,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 03:08:09] 2024-05-16 01:07:53,893 | INFO     | fitting pss+swap vs Time
[2024-05-16 03:08:09] 2024-05-16 01:07:53,894 | INFO     | model: linear, x: [1715809100.0, 1715809161.0, 1715809222.0, 1715809283.0, 1715809344.0, 1715809405.0, 1715809466.0, 1715809527.0, 1715809588.0, 1715809649.0, 1715
[2024-05-16 03:08:09] 2024-05-16 01:07:53,894 | INFO     | sum of square deviations: 2710627567.5
[2024-05-16 03:08:09] 2024-05-16 01:07:53,894 | INFO     | sum of deviations: 63884195961.0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,895 | INFO     | mean x: 1715815352.5
[2024-05-16 03:08:09] 2024-05-16 01:07:53,895 | INFO     | mean y: 2306910.5825242717
[2024-05-16 03:08:09] 2024-05-16 01:07:53,895 | INFO     | -- intersect: -40436108726.53812
[2024-05-16 03:08:09] 2024-05-16 01:07:53,895 | INFO     | intersect: -40436108726.53812
[2024-05-16 03:08:09] 2024-05-16 01:07:53,895 | INFO     | chi2: 3.4275405294629895
[2024-05-16 03:08:09] 2024-05-16 01:07:53,895 | INFO     | model: linear, x: [1715809100.0, 1715809161.0, 1715809222.0, 1715809283.0, 1715809344.0, 1715809405.0, 1715809466.0, 1715809527.0, 1715809588.0, 1715809649.0, 1715
[2024-05-16 03:08:09] 2024-05-16 01:07:53,895 | INFO     | sum of square deviations: 2518000700.0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,896 | INFO     | sum of deviations: 62196580696.999985
[2024-05-16 03:08:09] 2024-05-16 01:07:53,896 | INFO     | mean x: 1715815200.0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,896 | INFO     | mean y: 2305574.263681592
[2024-05-16 03:08:09] 2024-05-16 01:07:53,896 | INFO     | -- intersect: -42379667769.88161
[2024-05-16 03:08:09] 2024-05-16 01:07:53,896 | INFO     | intersect: -42379667769.88161
[2024-05-16 03:08:09] 2024-05-16 01:07:53,896 | INFO     | chi2: 3.4305184940492746
[2024-05-16 03:08:09] 2024-05-16 01:07:53,896 | INFO     | current chi2=3.4305184940492746 (change=-0.08688342444638134 %)
[2024-05-16 03:08:09] 2024-05-16 01:07:53,896 | INFO     | right removable region: 200
[2024-05-16 03:08:09] 2024-05-16 01:07:53,897 | INFO     | model: linear, x: [1715809405.0, 1715809466.0, 1715809527.0, 1715809588.0, 1715809649.0, 1715809710.0, 1715809771.0, 1715809832.0, 1715809893.0, 1715809954.0, 1715
[2024-05-16 03:08:09] 2024-05-16 01:07:53,897 | INFO     | sum of square deviations: 2518000700.0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,897 | INFO     | sum of deviations: 20152354182.000004
[2024-05-16 03:08:09] 2024-05-16 01:07:53,897 | INFO     | mean x: 1715815505.0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,898 | INFO     | mean y: 2341408.9154228857
[2024-05-16 03:08:09] 2024-05-16 01:07:53,898 | INFO     | -- intersect: -13729871520.067162
[2024-05-16 03:08:09] 2024-05-16 01:07:53,898 | INFO     | intersect: -13729871520.067162
[2024-05-16 03:08:09] 2024-05-16 01:07:53,898 | INFO     | chi2: 1.249372664401082
[2024-05-16 03:08:09] 2024-05-16 01:07:53,898 | INFO     | current chi2=1.249372664401082 (change=63.549003909318394 %)
[2024-05-16 03:08:09] 2024-05-16 01:07:53,898 | INFO     | model: linear, x: [1715809710.0, 1715809771.0, 1715809832.0, 1715809893.0, 1715809954.0, 1715810015.0, 1715810076.0, 1715810137.0, 1715810198.0, 1715810259.0, 1715
[2024-05-16 03:08:09] 2024-05-16 01:07:53,898 | INFO     | sum of square deviations: 2334722845.0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,899 | INFO     | sum of deviations: -12743076168.000002
[2024-05-16 03:08:09] 2024-05-16 01:07:53,899 | INFO     | mean x: 1715815657.5
[2024-05-16 03:08:09] 2024-05-16 01:07:53,899 | INFO     | mean y: 2368782.112244898
[2024-05-16 03:08:09] 2024-05-16 01:07:53,899 | INFO     | -- intersect: 9367407403.546347
[2024-05-16 03:08:09] 2024-05-16 01:07:53,899 | INFO     | intersect: 9367407403.546347
[2024-05-16 03:08:09] 2024-05-16 01:07:53,899 | INFO     | chi2: 0.13386443353229574
[2024-05-16 03:08:09] 2024-05-16 01:07:53,899 | INFO     | current chi2=0.13386443353229574 (change=89.2854680315527 %)
[2024-05-16 03:08:09] 2024-05-16 01:07:53,899 | INFO     | model: linear, x: [1715810015.0, 1715810076.0, 1715810137.0, 1715810198.0, 1715810259.0, 1715810320.0, 1715810381.0, 1715810442.0, 1715810503.0, 1715810564.0, 1715
[2024-05-16 03:08:09] 2024-05-16 01:07:53,899 | INFO     | sum of square deviations: 2160561440.0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,900 | INFO     | sum of deviations: -12065312792.999998
[2024-05-16 03:08:09] 2024-05-16 01:07:53,900 | INFO     | mean x: 1715815810.0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,900 | INFO     | mean y: 2368123.2879581153
[2024-05-16 03:08:09] 2024-05-16 01:07:53,900 | INFO     | -- intersect: 9584069462.373531
[2024-05-16 03:08:09] 2024-05-16 01:07:53,900 | INFO     | intersect: 9584069462.373531
[2024-05-16 03:08:09] 2024-05-16 01:07:53,900 | INFO     | chi2: 0.10067836498230756
[2024-05-16 03:08:09] 2024-05-16 01:07:53,901 | INFO     | current chi2=0.10067836498230756 (change=24.790803407823635 %)
[2024-05-16 03:08:09] 2024-05-16 01:07:53,901 | INFO     | left removable region: 30
[2024-05-16 03:08:09] 2024-05-16 01:07:53,901 | INFO     | model: linear, x: [1715810930.0, 1715810991.0, 1715811052.0, 1715811113.0, 1715811174.0, 1715811235.0, 1715811296.0, 1715811357.0, 1715811418.0, 1715811479.0, 1715
[2024-05-16 03:08:09] 2024-05-16 01:07:53,901 | INFO     | sum of square deviations: 1523386702.5
[2024-05-16 03:08:09] 2024-05-16 01:07:53,901 | INFO     | sum of deviations: 4407283885.499999
[2024-05-16 03:08:09] 2024-05-16 01:07:53,901 | INFO     | mean x: 1715816084.5
[2024-05-16 03:08:09] 2024-05-16 01:07:53,901 | INFO     | mean y: 2351633.723529412
[2024-05-16 03:08:09] 2024-05-16 01:07:53,901 | INFO     | -- intersect: -4961646389.423553
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | intersect: -4961646389.423553
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | chi2: 0.0004632139817004191
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | -- intersect: -4961646389.423553
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | current memory leak: 2.89 B/s (using 170 data points, chi2=0.00)
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | ..............................
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | . Timing measurements:
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | . get job = 0 s
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | . initial setup = 1 s
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | . payload setup = 5 s
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | . stage-in = 0 s
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | . payload execution = 12569 s
[2024-05-16 03:08:09] 2024-05-16 01:07:53,902 | INFO     | . stage-out = 0 s
[2024-05-16 03:08:09] 2024-05-16 01:07:53,903 | INFO     | . log creation = 0 s
[2024-05-16 03:08:09] 2024-05-16 01:07:53,903 | INFO     | ..............................
[2024-05-16 03:08:09] 2024-05-16 01:07:53,957 | INFO     | 
[2024-05-16 03:08:09] 2024-05-16 01:07:53,957 | INFO     | job summary report
[2024-05-16 03:08:09] 2024-05-16 01:07:53,957 | INFO     | --------------------------------------------------
[2024-05-16 03:08:09] 2024-05-16 01:07:53,957 | INFO     | PanDA job id: 6205833746
[2024-05-16 03:08:09] 2024-05-16 01:07:53,957 | INFO     | task id: 38776125
[2024-05-16 03:08:09] 2024-05-16 01:07:53,957 | INFO     | errors: (none)
[2024-05-16 03:08:09] 2024-05-16 01:07:53,957 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | pilot state: finished 
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | transexitcode: 0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | exeerrorcode: 0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | exeerrordiag: 
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | exitcode: 0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | exitmsg: OK
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | cpuconsumptiontime: 47401 s
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | nevents: 400
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | neventsw: 0
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | pid: 1697611
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | pgrp: 1697611
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | corecount: 4
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | event service: False
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | sizes: {0: 2392205, 4: 2392411, 11: 2392439, 12577: 2422328, 12578: 2422327, 12579: 2431549, 12584: 2431663}
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | --------------------------------------------------
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | 
[2024-05-16 03:08:09] 2024-05-16 01:07:53,958 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-05-16 03:08:09] 2024-05-16 01:07:53,976 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,978 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,978 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,978 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 03:08:09] 2024-05-16 01:07:53,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,978 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 03:08:09] 2024-05-16 01:07:53,978 | INFO     | job 6205833746 has completed (purged errors)
[2024-05-16 03:08:09] 2024-05-16 01:07:53,978 | INFO     | overall cleanup function is called
[2024-05-16 03:08:09] 2024-05-16 01:07:54,986 | INFO     | --- collectZombieJob: --- 10, [1697611]
[2024-05-16 03:08:09] 2024-05-16 01:07:54,986 | INFO     | zombie collector waiting for pid 1697611
[2024-05-16 03:08:09] 2024-05-16 01:07:54,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 03:08:09] 2024-05-16 01:07:55,989 | INFO     | collected zombie processes
[2024-05-16 03:08:09] 2024-05-16 01:07:55,990 | INFO     | will now attempt to kill all subprocesses of pid=1697611
[2024-05-16 03:08:09] 2024-05-16 01:07:56,133 | INFO     | process IDs to be killed: [1697611] (in reverse order)
[2024-05-16 03:08:09] 2024-05-16 01:07:56,230 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 03:08:09] 2024-05-16 01:07:56,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 03:08:09] 2024-05-16 01:07:56,237 | INFO     | did not find any defunct processes belonging to 1697611
[2024-05-16 03:08:09] 2024-05-16 01:07:56,243 | INFO     | did not find any defunct processes belonging to 1697611
[2024-05-16 03:08:09] 2024-05-16 01:07:56,243 | INFO     | ready for new job
[2024-05-16 03:08:09] 2024-05-16 01:07:56,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 03:08:09] 2024-05-16 01:07:56,245 | INFO     | *************************************
[2024-05-16 03:08:09] 2024-05-16 01:07:56,245 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 03:08:09] 2024-05-16 01:07:56,245 | INFO     | *************************************
[2024-05-16 03:08:09] 2024-05-16 01:07:56,245 | INFO     | 
[2024-05-16 03:08:09] 2024-05-16 01:07:56,248 | INFO     | architecture information:
[2024-05-16 03:08:09] 2024-05-16 01:07:56,248 | INFO     | executing command: cat /etc/os-release
[2024-05-16 03:08:09] 2024-05-16 01:07:56,262 | INFO     | cat /etc/os-release:
[2024-05-16 03:08:09] NAME="CentOS Linux"
[2024-05-16 03:08:09] VERSION="7 (Core)"
[2024-05-16 03:08:09] ID="centos"
[2024-05-16 03:08:09] ID_LIKE="rhel fedora"
[2024-05-16 03:08:09] VERSION_ID="7"
[2024-05-16 03:08:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 03:08:09] ANSI_COLOR="0;31"
[2024-05-16 03:08:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 03:08:09] HOME_URL="https://www.centos.org/"
[2024-05-16 03:08:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 03:08:09] 
[2024-05-16 03:08:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 03:08:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 03:08:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 03:08:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 03:08:09] 
[2024-05-16 03:08:09] 2024-05-16 01:07:56,262 | INFO     | *************************************
[2024-05-16 03:08:09] 2024-05-16 01:07:56,765 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-05-16 03:08:09] 2024-05-16 01:07:56,781 | INFO     | sufficient remaining disk space (590465728512 B)
[2024-05-16 03:08:09] 2024-05-16 01:07:56,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 03:08:09] 2024-05-16 01:07:56,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 03:08:09] 2024-05-16 01:07:56,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 03:08:09] 2024-05-16 01:07:56,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 03:08:09] 2024-05-16 01:07:56,782 | INFO     | aborting loop
[2024-05-16 03:08:09] 2024-05-16 01:07:57,581 | INFO     | all data control threads have been joined
[2024-05-16 03:08:09] 2024-05-16 01:07:57,601 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 03:08:09] 2024-05-16 01:07:57,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 03:08:09] 2024-05-16 01:07:57,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 03:08:09] 2024-05-16 01:07:57,639 | INFO     | all job control threads have been joined
[2024-05-16 03:08:09] 2024-05-16 01:07:57,787 | INFO     | [job] retrieve thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:57,788 | INFO     | [job] job monitor thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,004 | INFO     | all payload control threads have been joined
[2024-05-16 03:08:09] 2024-05-16 01:07:58,269 | INFO     | [payload] failed_post thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,321 | INFO     | [data] copytool_in thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,328 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,421 | INFO     | [payload] validate_post thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,586 | INFO     | [data] control thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,644 | INFO     | [job] control thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,788 | INFO     | [data] copytool_out thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,835 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,933 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 03:08:09] 2024-05-16 01:07:58,967 | INFO     | [job] validate thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:58,978 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:59,009 | INFO     | [payload] control thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:07:59,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 03:08:09] 2024-05-16 01:07:59,972 | INFO     | [job] queue monitor thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:08:03,327 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 03:08:09] 2024-05-16 01:08:03,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47047888073792)>', '<ExcThread(monitor, started 47048063526656)>']
[2024-05-16 03:08:09] 2024-05-16 01:08:04,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 03:08:09] 2024-05-16 01:08:04,635 | INFO     | [monitor] control thread has ended
[2024-05-16 03:08:09] 2024-05-16 01:08:08,937 | INFO     | all workflow threads have been joined
[2024-05-16 03:08:09] 2024-05-16 01:08:08,937 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 03:08:09] 2024-05-16 01:08:08,937 | INFO     | traces error code: 0
[2024-05-16 03:08:09] 2024-05-16 01:08:08,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 03:08:09] 2024-05-16 01:08:09,024 [wrapper] ==== pilot stdout END ====
[2024-05-16 03:08:09] 2024-05-16 01:08:09,027 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 03:08:09] 2024-05-16 01:08:09,029 [wrapper] pilotpid: 1689570
[2024-05-16 03:08:09] 2024-05-16 01:08:09,031 [wrapper] Pilot exit status: 0
[2024-05-16 03:08:09] 2024-05-16 01:08:09,039 [wrapper] pandaids: 6205833746
[2024-05-16 03:08:09] 2024-05-16 01:08:09,105 [wrapper] cleanup: SIGTERM to supervisor_pilot 2245494 1689571
[2024-05-16 03:08:09] 2024-05-16 01:08:09,107 [wrapper] Test setup, not cleaning
[2024-05-16 03:08:09] 2024-05-16 01:08:09,110 [wrapper] ==== wrapper stdout END ====
[2024-05-16 03:08:09] 2024-05-16 01:08:09,112 [wrapper] ==== wrapper stderr END ====
[2024-05-16 03:08:09] 2024-05-16 01:08:09,117 [wrapper] apfmon messages muted
[2024-05-16 03:08:09]  *** Error codes and diagnostics ***
[2024-05-16 03:08:09]     "exeErrorCode": 0,
[2024-05-16 03:08:09]     "exeErrorDiag": "",
[2024-05-16 03:08:09]     "pilotErrorCode": 0,
[2024-05-16 03:08:09]     "pilotErrorDiag": "",
[2024-05-16 03:08:09]  *** Listing of results directory ***
[2024-05-16 03:08:09] total 841276
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc    467845 May 13 13:25 pilot3.tar.gz
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc      5633 May 13 13:36 queuedata.json
[2024-05-16 03:08:09] -rwx------ 1 boinc boinc     32251 May 13 13:37 runpilot2-wrapper.sh
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc       100 May 15 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 03:08:09] -rwxr-xr-x 1 boinc boinc      7986 May 15 23:37 run_atlas
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc       105 May 15 23:37 job.xml
[2024-05-16 03:08:09] -rw-r--r-- 2 boinc boinc 602259035 May 15 23:37 EVNT.38776119._000126.pool.root.1
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc      6663 May 15 23:37 init_data.xml
[2024-05-16 03:08:09] -rw-r--r-- 2 boinc boinc     17537 May 15 23:37 start_atlas.sh
[2024-05-16 03:08:09] drwxrwx--x 2 boinc boinc      4096 May 15 23:37 shared
[2024-05-16 03:08:09] -rw-r--r-- 2 boinc boinc    480010 May 15 23:37 input.tar.gz
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc         0 May 15 23:37 boinc_lockfile
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc      2633 May 15 23:37 pandaJob.out
[2024-05-16 03:08:09] -rw------- 1 boinc boinc       424 May 15 23:37 setup.sh.local
[2024-05-16 03:08:09] -rw------- 1 boinc boinc   1011331 May 15 23:37 agis_schedconf.cvmfs.json
[2024-05-16 03:08:09] -rw------- 1 boinc boinc   1324701 May 15 23:37 cric_ddmendpoints.json
[2024-05-16 03:08:09] drwx------ 4 boinc boinc      4096 May 15 23:37 pilot3
[2024-05-16 03:08:09] -rw------- 1 boinc boinc 252336835 May 16 03:07 HITS.38776125._004201.pool.root.1
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc       531 May 16 03:07 boinc_task_state.xml
[2024-05-16 03:08:09] -rw------- 1 boinc boinc        95 May 16 03:07 pilot_heartbeat.json
[2024-05-16 03:08:09] -rw------- 1 boinc boinc      1048 May 16 03:07 memory_monitor_summary.json
[2024-05-16 03:08:09] -rw------- 1 boinc boinc         0 May 16 03:07 agis_ddmendpoints.agis.ALL.json
[2024-05-16 03:08:09] -rw------- 1 boinc boinc    325159 May 16 03:07 log.38776125._004201.job.log.tgz.1
[2024-05-16 03:08:09] -rw------- 1 boinc boinc      7759 May 16 03:07 heartbeat.json
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc      8192 May 16 03:07 boinc_mmap_file
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc        28 May 16 03:07 wrapper_checkpoint.txt
[2024-05-16 03:08:09] -rw------- 1 boinc boinc      4221 May 16 03:08 pilotlog.txt
[2024-05-16 03:08:09] -rw------- 1 boinc boinc   1347982 May 16 03:08 log.38776125._004201.job.log.1
[2024-05-16 03:08:09] -rw------- 1 boinc boinc       357 May 16 03:08 output.list
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc       620 May 16 03:08 runtime_log
[2024-05-16 03:08:09] -rw------- 1 boinc boinc   1689600 May 16 03:08 result.tar.gz
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc     11410 May 16 03:08 runtime_log.err
[2024-05-16 03:08:09] -rw------- 1 boinc boinc       658 May 16 03:08 GdZKDmiAjQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmeYKKDmwPSoNm.diag
[2024-05-16 03:08:09] -rw-r--r-- 1 boinc boinc     21293 May 16 03:08 stderr.txt
[2024-05-16 03:08:09] HITS file was successfully produced:
[2024-05-16 03:08:09] -rw------- 1 boinc boinc 252336835 May 16 03:07 shared/HITS.pool.root.1
[2024-05-16 03:08:09]  *** Contents of shared directory: ***
[2024-05-16 03:08:09] total 836720
[2024-05-16 03:08:09] -rw-r--r-- 2 boinc boinc 602259035 May 15 23:37 ATLAS.root_0
[2024-05-16 03:08:09] -rw-r--r-- 2 boinc boinc     17537 May 15 23:37 start_atlas.sh
[2024-05-16 03:08:09] -rw-r--r-- 2 boinc boinc    480010 May 15 23:37 input.tar.gz
[2024-05-16 03:08:09] -rw------- 1 boinc boinc 252336835 May 16 03:07 HITS.pool.root.1
[2024-05-16 03:08:09] -rw------- 1 boinc boinc   1689600 May 16 03:08 result.tar.gz
03:08:11 (1685237): run_atlas exited; CPU time 47133.467696
03:08:11 (1685237): called boinc_finish(0)

</stderr_txt>
]]>

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