Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:30:28 (1452667): wrapper (7.7.26015): starting
08:30:28 (1452667): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 08:30:28] Arguments: --nthreads 4
[2024-05-16 08:30:28] Threads: 4
[2024-05-16 08:30:28] Checking for CVMFS
[2024-05-16 08:30:28] No cvmfs_config command found, will try listing directly
[2024-05-16 08:30:28] CVMFS is ok
[2024-05-16 08:30:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 08:30:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 08:30:28] Further information can be found at the LHC@home message board.
[2024-05-16 08:30:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 08:30:28] Checking for apptainer binary...
[2024-05-16 08:30:28] which: no apptainer in ((null))
[2024-05-16 08:30:28] apptainer is not installed, using version from CVMFS
[2024-05-16 08:30:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 08:30:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-16 08:30:29] apptainer works
[2024-05-16 08:30:29] Set ATHENA_PROC_NUMBER=4
[2024-05-16 08:30:29] Set ATHENA_CORE_NUMBER=4
[2024-05-16 08:30:29] Starting ATLAS job with PandaID=6205833476
[2024-05-16 08:30:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 11:50:39]  *** The last 200 lines of the pilot log: ***
[2024-05-16 11:50:39] 2024-05-16 09:50:25,901 | INFO     | model: linear, x: [1715841072.0, 1715841133.0, 1715841194.0, 1715841255.0, 1715841316.0, 1715841377.0, 1715841438.0, 1715841499.0, 1715841560.0, 1715841621.0, 1715
[2024-05-16 11:50:39] 2024-05-16 09:50:25,901 | INFO     | sum of square deviations: 2160561440.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,903 | INFO     | sum of deviations: 77425242958.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,903 | INFO     | mean x: 1715846867.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,903 | INFO     | mean y: 2276790.821989529
[2024-05-16 11:50:39] 2024-05-16 09:50:25,903 | INFO     | -- intersect: -61486305804.72693
[2024-05-16 11:50:39] 2024-05-16 09:50:25,903 | INFO     | intersect: -61486305804.72693
[2024-05-16 11:50:39] 2024-05-16 09:50:25,903 | INFO     | chi2: 3.9976237670202415
[2024-05-16 11:50:39] 2024-05-16 09:50:25,903 | INFO     | current chi2=3.9976237670202415 (change=-0.02458640450659785 %)
[2024-05-16 11:50:39] 2024-05-16 09:50:25,904 | INFO     | right removable region: 190
[2024-05-16 11:50:39] 2024-05-16 09:50:25,904 | INFO     | model: linear, x: [1715841377.0, 1715841438.0, 1715841499.0, 1715841560.0, 1715841621.0, 1715841682.0, 1715841743.0, 1715841804.0, 1715841865.0, 1715841926.0, 1715
[2024-05-16 11:50:39] 2024-05-16 09:50:25,904 | INFO     | sum of square deviations: 2160561440.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,905 | INFO     | sum of deviations: 34840057707.000015
[2024-05-16 11:50:39] 2024-05-16 09:50:25,905 | INFO     | mean x: 1715847172.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,905 | INFO     | mean y: 2317769.2356020943
[2024-05-16 11:50:39] 2024-05-16 09:50:25,906 | INFO     | -- intersect: -27666515609.95901
[2024-05-16 11:50:39] 2024-05-16 09:50:25,906 | INFO     | intersect: -27666515609.95901
[2024-05-16 11:50:39] 2024-05-16 09:50:25,906 | INFO     | chi2: 1.5128756085311839
[2024-05-16 11:50:39] 2024-05-16 09:50:25,906 | INFO     | current chi2=1.5128756085311839 (change=62.14632345514778 %)
[2024-05-16 11:50:39] 2024-05-16 09:50:25,907 | INFO     | model: linear, x: [1715841682.0, 1715841743.0, 1715841804.0, 1715841865.0, 1715841926.0, 1715841987.0, 1715842048.0, 1715842109.0, 1715842170.0, 1715842231.0, 1715
[2024-05-16 11:50:39] 2024-05-16 09:50:25,907 | INFO     | sum of square deviations: 1995283922.5
[2024-05-16 11:50:39] 2024-05-16 09:50:25,908 | INFO     | sum of deviations: -681676159.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,908 | INFO     | mean x: 1715847324.5
[2024-05-16 11:50:39] 2024-05-16 09:50:25,908 | INFO     | mean y: 2350556.6666666665
[2024-05-16 11:50:39] 2024-05-16 09:50:25,908 | INFO     | -- intersect: 588558965.6083202
[2024-05-16 11:50:39] 2024-05-16 09:50:25,908 | INFO     | intersect: 588558965.6083202
[2024-05-16 11:50:39] 2024-05-16 09:50:25,908 | INFO     | chi2: 0.08227583770086053
[2024-05-16 11:50:39] 2024-05-16 09:50:25,909 | INFO     | current chi2=0.08227583770086053 (change=94.56162573863291 %)
[2024-05-16 11:50:39] 2024-05-16 09:50:25,909 | INFO     | model: linear, x: [1715841987.0, 1715842048.0, 1715842109.0, 1715842170.0, 1715842231.0, 1715842292.0, 1715842353.0, 1715842414.0, 1715842475.0, 1715842536.0, 1715
[2024-05-16 11:50:39] 2024-05-16 09:50:25,909 | INFO     | sum of square deviations: 1838657730.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,910 | INFO     | sum of deviations: -5798351157.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,910 | INFO     | mean x: 1715847477.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,910 | INFO     | mean y: 2355462.17679558
[2024-05-16 11:50:39] 2024-05-16 09:50:25,910 | INFO     | -- intersect: 5413414867.72395
[2024-05-16 11:50:39] 2024-05-16 09:50:25,910 | INFO     | intersect: 5413414867.72395
[2024-05-16 11:50:39] 2024-05-16 09:50:25,911 | INFO     | chi2: 0.009386304680213831
[2024-05-16 11:50:39] 2024-05-16 09:50:25,911 | INFO     | current chi2=0.009386304680213831 (change=88.59166318750754 %)
[2024-05-16 11:50:39] 2024-05-16 09:50:25,911 | INFO     | model: linear, x: [1715842292.0, 1715842353.0, 1715842414.0, 1715842475.0, 1715842536.0, 1715842597.0, 1715842658.0, 1715842719.0, 1715842780.0, 1715842841.0, 1715
[2024-05-16 11:50:39] 2024-05-16 09:50:25,911 | INFO     | sum of square deviations: 1690450300.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,912 | INFO     | sum of deviations: -5456965297.5
[2024-05-16 11:50:39] 2024-05-16 09:50:25,912 | INFO     | mean x: 1715847629.5
[2024-05-16 11:50:39] 2024-05-16 09:50:25,913 | INFO     | mean y: 2355108.5056818184
[2024-05-16 11:50:39] 2024-05-16 09:50:25,913 | INFO     | -- intersect: 5541305866.170156
[2024-05-16 11:50:39] 2024-05-16 09:50:25,913 | INFO     | intersect: 5541305866.170156
[2024-05-16 11:50:39] 2024-05-16 09:50:25,913 | INFO     | chi2: 0.009334812425356883
[2024-05-16 11:50:39] 2024-05-16 09:50:25,913 | INFO     | current chi2=0.009334812425356883 (change=0.5485892117426472 %)
[2024-05-16 11:50:39] 2024-05-16 09:50:25,913 | INFO     | left removable region: 40
[2024-05-16 11:50:39] 2024-05-16 09:50:25,913 | INFO     | model: linear, x: [1715843512.0, 1715843573.0, 1715843634.0, 1715843695.0, 1715843756.0, 1715843817.0, 1715843878.0, 1715843939.0, 1715844000.0, 1715844061.0, 1715
[2024-05-16 11:50:39] 2024-05-16 09:50:25,913 | INFO     | sum of square deviations: 1046484737.5
[2024-05-16 11:50:39] 2024-05-16 09:50:25,914 | INFO     | sum of deviations: -617716134.0
[2024-05-16 11:50:39] 2024-05-16 09:50:25,914 | INFO     | mean x: 1715848056.5
[2024-05-16 11:50:39] 2024-05-16 09:50:25,914 | INFO     | mean y: 2349089.466666667
[2024-05-16 11:50:39] 2024-05-16 09:50:25,915 | INFO     | -- intersect: 1015175163.2846745
[2024-05-16 11:50:39] 2024-05-16 09:50:25,915 | INFO     | intersect: 1015175163.2846745
[2024-05-16 11:50:39] 2024-05-16 09:50:25,915 | INFO     | chi2: 0.003566852210692693
[2024-05-16 11:50:39] 2024-05-16 09:50:25,915 | INFO     | -- intersect: 1015175163.2846745
[2024-05-16 11:50:39] 2024-05-16 09:50:25,915 | INFO     | current memory leak: -0.59 B/s (using 150 data points, chi2=0.00)
[2024-05-16 11:50:39] 2024-05-16 09:50:25,915 | INFO     | ..............................
[2024-05-16 11:50:39] 2024-05-16 09:50:25,916 | INFO     | . Timing measurements:
[2024-05-16 11:50:39] 2024-05-16 09:50:25,916 | INFO     | . get job = 0 s
[2024-05-16 11:50:39] 2024-05-16 09:50:25,916 | INFO     | . initial setup = 1 s
[2024-05-16 11:50:39] 2024-05-16 09:50:25,916 | INFO     | . payload setup = 7 s
[2024-05-16 11:50:39] 2024-05-16 09:50:25,916 | INFO     | . stage-in = 0 s
[2024-05-16 11:50:39] 2024-05-16 09:50:25,916 | INFO     | . payload execution = 11946 s
[2024-05-16 11:50:39] 2024-05-16 09:50:25,916 | INFO     | . stage-out = 1 s
[2024-05-16 11:50:39] 2024-05-16 09:50:25,916 | INFO     | . log creation = 0 s
[2024-05-16 11:50:39] 2024-05-16 09:50:25,916 | INFO     | ..............................
[2024-05-16 11:50:39] 2024-05-16 09:50:26,070 | INFO     | 
[2024-05-16 11:50:39] 2024-05-16 09:50:26,070 | INFO     | job summary report
[2024-05-16 11:50:39] 2024-05-16 09:50:26,070 | INFO     | --------------------------------------------------
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | PanDA job id: 6205833476
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | task id: 38776125
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | errors: (none)
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | pilot state: finished 
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | transexitcode: 0
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | exeerrorcode: 0
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | exeerrordiag: 
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | exitcode: 0
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | exitmsg: OK
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | cpuconsumptiontime: 44956 s
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | nevents: 400
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | neventsw: 0
[2024-05-16 11:50:39] 2024-05-16 09:50:26,071 | INFO     | pid: 1467259
[2024-05-16 11:50:39] 2024-05-16 09:50:26,072 | INFO     | pgrp: 1467259
[2024-05-16 11:50:39] 2024-05-16 09:50:26,072 | INFO     | corecount: 4
[2024-05-16 11:50:39] 2024-05-16 09:50:26,072 | INFO     | event service: False
[2024-05-16 11:50:39] 2024-05-16 09:50:26,072 | INFO     | sizes: {0: 2392033, 1: 2392232, 7: 2392438, 12: 2392466, 11957: 2422051, 11959: 2431033, 11960: 2431217, 11967: 2431387}
[2024-05-16 11:50:39] 2024-05-16 09:50:26,072 | INFO     | --------------------------------------------------
[2024-05-16 11:50:39] 2024-05-16 09:50:26,072 | INFO     | 
[2024-05-16 11:50:39] 2024-05-16 09:50:26,072 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-05-16 11:50:39] 2024-05-16 09:50:26,106 | WARNING  | process 1467259 is no longer using CPU - aborting
[2024-05-16 11:50:39] 2024-05-16 09:50:26,107 | INFO     | aborting job monitoring since job object (job id=6205833476) has expired
[2024-05-16 11:50:39] 2024-05-16 09:50:26,120 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,120 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,121 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,121 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,121 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,121 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,121 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,121 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,121 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 11:50:39] 2024-05-16 09:50:26,122 | INFO     | job 6205833476 has completed (purged errors)
[2024-05-16 11:50:39] 2024-05-16 09:50:26,123 | INFO     | overall cleanup function is called
[2024-05-16 11:50:39] 2024-05-16 09:50:27,131 | INFO     | --- collectZombieJob: --- 10, [1467259]
[2024-05-16 11:50:39] 2024-05-16 09:50:27,131 | INFO     | zombie collector waiting for pid 1467259
[2024-05-16 11:50:39] 2024-05-16 09:50:27,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 11:50:39] 2024-05-16 09:50:28,136 | INFO     | collected zombie processes
[2024-05-16 11:50:39] 2024-05-16 09:50:28,136 | INFO     | will now attempt to kill all subprocesses of pid=1467259
[2024-05-16 11:50:39] 2024-05-16 09:50:28,382 | INFO     | process IDs to be killed: [1467259] (in reverse order)
[2024-05-16 11:50:39] 2024-05-16 09:50:28,599 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 11:50:39] 2024-05-16 09:50:28,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 11:50:39] 2024-05-16 09:50:28,614 | INFO     | did not find any defunct processes belonging to 1467259
[2024-05-16 11:50:39] 2024-05-16 09:50:28,623 | INFO     | did not find any defunct processes belonging to 1467259
[2024-05-16 11:50:39] 2024-05-16 09:50:28,624 | INFO     | ready for new job
[2024-05-16 11:50:39] 2024-05-16 09:50:28,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 11:50:39] 2024-05-16 09:50:28,625 | INFO     | *************************************
[2024-05-16 11:50:39] 2024-05-16 09:50:28,625 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 11:50:39] 2024-05-16 09:50:28,625 | INFO     | *************************************
[2024-05-16 11:50:39] 2024-05-16 09:50:28,625 | INFO     | 
[2024-05-16 11:50:39] 2024-05-16 09:50:28,630 | INFO     | architecture information:
[2024-05-16 11:50:39] 2024-05-16 09:50:28,630 | INFO     | executing command: cat /etc/os-release
[2024-05-16 11:50:39] 2024-05-16 09:50:28,646 | INFO     | cat /etc/os-release:
[2024-05-16 11:50:39] NAME="CentOS Linux"
[2024-05-16 11:50:39] VERSION="7 (Core)"
[2024-05-16 11:50:39] ID="centos"
[2024-05-16 11:50:39] ID_LIKE="rhel fedora"
[2024-05-16 11:50:39] VERSION_ID="7"
[2024-05-16 11:50:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 11:50:39] ANSI_COLOR="0;31"
[2024-05-16 11:50:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 11:50:39] HOME_URL="https://www.centos.org/"
[2024-05-16 11:50:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 11:50:39] 
[2024-05-16 11:50:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 11:50:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 11:50:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 11:50:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 11:50:39] 
[2024-05-16 11:50:39] 2024-05-16 09:50:28,646 | INFO     | *************************************
[2024-05-16 11:50:39] 2024-05-16 09:50:29,148 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-05-16 11:50:39] 2024-05-16 09:50:29,170 | INFO     | sufficient remaining disk space (3051078287360 B)
[2024-05-16 11:50:39] 2024-05-16 09:50:29,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 11:50:39] 2024-05-16 09:50:29,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 11:50:39] 2024-05-16 09:50:29,171 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 11:50:39] 2024-05-16 09:50:29,172 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 11:50:39] 2024-05-16 09:50:29,172 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 11:50:39] 2024-05-16 09:50:29,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 11:50:39] 2024-05-16 09:50:29,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 11:50:39] 2024-05-16 09:50:29,290 | INFO     | all data control threads have been joined
[2024-05-16 11:50:39] 2024-05-16 09:50:29,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 11:50:39] 2024-05-16 09:50:29,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 11:50:39] 2024-05-16 09:50:29,614 | INFO     | aborting loop
[2024-05-16 11:50:39] 2024-05-16 09:50:29,996 | INFO     | all payload control threads have been joined
[2024-05-16 11:50:39] 2024-05-16 09:50:30,038 | INFO     | all job control threads have been joined
[2024-05-16 11:50:39] 2024-05-16 09:50:30,176 | INFO     | [job] retrieve thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:30,295 | INFO     | [data] control thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:30,509 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:30,619 | INFO     | [job] job monitor thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:30,704 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:30,793 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:30,867 | INFO     | [payload] failed_post thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:31,001 | INFO     | [payload] control thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:31,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 11:50:39] 2024-05-16 09:50:31,039 | INFO     | [job] control thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:31,062 | INFO     | [data] copytool_in thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:31,174 | INFO     | [data] copytool_out thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:31,290 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:31,523 | INFO     | [job] validate thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:31,711 | INFO     | [payload] validate_post thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:32,035 | INFO     | [job] queue monitor thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:33,308 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 11:50:39] 2024-05-16 09:50:33,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47506148942912)>', '<ExcThread(monitor, started 47506320193280)>']
[2024-05-16 11:50:39] 2024-05-16 09:50:34,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 11:50:39] 2024-05-16 09:50:34,200 | INFO     | [monitor] control thread has ended
[2024-05-16 11:50:39] 2024-05-16 09:50:38,405 | INFO     | all workflow threads have been joined
[2024-05-16 11:50:39] 2024-05-16 09:50:38,405 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 11:50:39] 2024-05-16 09:50:38,406 | INFO     | traces error code: 0
[2024-05-16 11:50:39] 2024-05-16 09:50:38,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 11:50:39] 2024-05-16 09:50:38,495 [wrapper] ==== pilot stdout END ====
[2024-05-16 11:50:39] 2024-05-16 09:50:38,498 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 11:50:39] 2024-05-16 09:50:38,500 [wrapper] pilotpid: 1457387
[2024-05-16 11:50:39] 2024-05-16 09:50:38,506 [wrapper] Pilot exit status: 0
[2024-05-16 11:50:39] 2024-05-16 09:50:38,514 [wrapper] pandaids: 6205833476
[2024-05-16 11:50:39] 2024-05-16 09:50:38,609 [wrapper] cleanup: SIGTERM to supervisor_pilot 2579009 1457388
[2024-05-16 11:50:39] 2024-05-16 09:50:38,611 [wrapper] Test setup, not cleaning
[2024-05-16 11:50:39] 2024-05-16 09:50:38,613 [wrapper] ==== wrapper stdout END ====
[2024-05-16 11:50:39] 2024-05-16 09:50:38,616 [wrapper] ==== wrapper stderr END ====
[2024-05-16 11:50:39] 2024-05-16 09:50:38,620 [wrapper] apfmon messages muted
[2024-05-16 11:50:39]  *** Error codes and diagnostics ***
[2024-05-16 11:50:39]     "exeErrorCode": 0,
[2024-05-16 11:50:39]     "exeErrorDiag": "",
[2024-05-16 11:50:39]     "pilotErrorCode": 0,
[2024-05-16 11:50:39]     "pilotErrorDiag": "",
[2024-05-16 11:50:39]  *** Listing of results directory ***
[2024-05-16 11:50:39] total 834900
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc    467845 May 13 13:11 pilot3.tar.gz
[2024-05-16 11:50:39] -rwx------ 1 boinc boinc     32251 May 13 13:22 runpilot2-wrapper.sh
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc      5633 May 13 13:22 queuedata.json
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc       100 May 16 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 11:50:39] -rwxr-xr-x 1 boinc boinc      7986 May 16 08:30 run_atlas
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc       105 May 16 08:30 job.xml
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc      6643 May 16 08:30 init_data.xml
[2024-05-16 11:50:39] -rw-r--r-- 2 boinc boinc 603053118 May 16 08:30 EVNT.38776119._000118.pool.root.1
[2024-05-16 11:50:39] -rw-r--r-- 2 boinc boinc     17537 May 16 08:30 start_atlas.sh
[2024-05-16 11:50:39] drwxrwx--x 2 boinc boinc      4096 May 16 08:30 shared
[2024-05-16 11:50:39] -rw-r--r-- 2 boinc boinc    479999 May 16 08:30 input.tar.gz
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc         0 May 16 08:30 boinc_lockfile
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc      2632 May 16 08:30 pandaJob.out
[2024-05-16 11:50:39] -rw------- 1 boinc boinc       424 May 16 08:30 setup.sh.local
[2024-05-16 11:50:39] -rw------- 1 boinc boinc   1010635 May 16 08:30 agis_schedconf.cvmfs.json
[2024-05-16 11:50:39] -rw------- 1 boinc boinc   1324701 May 16 08:30 cric_ddmendpoints.json
[2024-05-16 11:50:39] drwx------ 4 boinc boinc      4096 May 16 08:30 pilot3
[2024-05-16 11:50:39] -rw------- 1 boinc boinc 245226347 May 16 11:49 HITS.38776125._004008.pool.root.1
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc       532 May 16 11:49 boinc_task_state.xml
[2024-05-16 11:50:39] -rw------- 1 boinc boinc      1038 May 16 11:50 memory_monitor_summary.json
[2024-05-16 11:50:39] -rw------- 1 boinc boinc         0 May 16 11:50 agis_ddmendpoints.agis.ALL.json
[2024-05-16 11:50:39] -rw------- 1 boinc boinc    323895 May 16 11:50 log.38776125._004008.job.log.tgz.1
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc      8192 May 16 11:50 boinc_mmap_file
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc        28 May 16 11:50 wrapper_checkpoint.txt
[2024-05-16 11:50:39] -rw------- 1 boinc boinc        95 May 16 11:50 pilot_heartbeat.json
[2024-05-16 11:50:39] -rw------- 1 boinc boinc      7714 May 16 11:50 heartbeat.json
[2024-05-16 11:50:39] -rw------- 1 boinc boinc      4345 May 16 11:50 pilotlog.txt
[2024-05-16 11:50:39] -rw------- 1 boinc boinc   1240334 May 16 11:50 log.38776125._004008.job.log.1
[2024-05-16 11:50:39] -rw------- 1 boinc boinc       357 May 16 11:50 output.list
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc       620 May 16 11:50 runtime_log
[2024-05-16 11:50:39] -rw------- 1 boinc boinc   1587200 May 16 11:50 result.tar.gz
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc     11410 May 16 11:50 runtime_log.err
[2024-05-16 11:50:39] -rw------- 1 boinc boinc       657 May 16 11:50 DS9LDmRwiQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmMWKKDmX28COo.diag
[2024-05-16 11:50:39] -rw-r--r-- 1 boinc boinc     21412 May 16 11:50 stderr.txt
[2024-05-16 11:50:39] HITS file was successfully produced:
[2024-05-16 11:50:39] -rw------- 1 boinc boinc 245226347 May 16 11:49 shared/HITS.pool.root.1
[2024-05-16 11:50:39]  *** Contents of shared directory: ***
[2024-05-16 11:50:39] total 830452
[2024-05-16 11:50:39] -rw-r--r-- 2 boinc boinc 603053118 May 16 08:30 ATLAS.root_0
[2024-05-16 11:50:39] -rw-r--r-- 2 boinc boinc     17537 May 16 08:30 start_atlas.sh
[2024-05-16 11:50:39] -rw-r--r-- 2 boinc boinc    479999 May 16 08:30 input.tar.gz
[2024-05-16 11:50:39] -rw------- 1 boinc boinc 245226347 May 16 11:49 HITS.pool.root.1
[2024-05-16 11:50:39] -rw------- 1 boinc boinc   1587200 May 16 11:50 result.tar.gz
11:50:40 (1452667): run_atlas exited; CPU time 44668.146848
11:50:40 (1452667): called boinc_finish(0)

</stderr_txt>
]]>

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