Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:32:38 (2133832): wrapper (7.7.26015): starting
21:32:38 (2133832): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 21:32:38] Arguments: --nthreads 4
[2024-05-15 21:32:38] Threads: 4
[2024-05-15 21:32:38] Checking for CVMFS
[2024-05-15 21:32:38] No cvmfs_config command found, will try listing directly
[2024-05-15 21:32:38] CVMFS is ok
[2024-05-15 21:32:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 21:32:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 21:32:38] Further information can be found at the LHC@home message board.
[2024-05-15 21:32:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 21:32:38] Checking for apptainer binary...
[2024-05-15 21:32:38] which: no apptainer in ((null))
[2024-05-15 21:32:38] apptainer is not installed, using version from CVMFS
[2024-05-15 21:32:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 21:32:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-15 21:32:39] apptainer works
[2024-05-15 21:32:39] Set ATHENA_PROC_NUMBER=4
[2024-05-15 21:32:39] Set ATHENA_CORE_NUMBER=4
[2024-05-15 21:32:39] Starting ATLAS job with PandaID=6205828505
[2024-05-15 21:32:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 01:01:43]  *** The last 200 lines of the pilot log: ***
[2024-05-16 01:01:43] 2024-05-15 23:01:25,877 | INFO     | intersect: -60706125160.51099
[2024-05-16 01:01:43] 2024-05-15 23:01:25,877 | INFO     | chi2: 4.176857327840329
[2024-05-16 01:01:43] 2024-05-15 23:01:25,877 | INFO     | model: linear, x: [1715801593.0, 1715801654.0, 1715801715.0, 1715801776.0, 1715801837.0, 1715801898.0, 1715801959.0, 1715802020.0, 1715802081.0, 1715802142.0, 1715
[2024-05-16 01:01:43] 2024-05-15 23:01:25,878 | INFO     | sum of square deviations: 2480604650.0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,879 | INFO     | sum of deviations: 91933811077.0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,879 | INFO     | mean x: 1715807662.5
[2024-05-16 01:01:43] 2024-05-15 23:01:25,879 | INFO     | mean y: 2289431.81
[2024-05-16 01:01:43] 2024-05-15 23:01:25,879 | INFO     | -- intersect: -63587342833.34921
[2024-05-16 01:01:43] 2024-05-15 23:01:25,879 | INFO     | intersect: -63587342833.34921
[2024-05-16 01:01:43] 2024-05-15 23:01:25,879 | INFO     | chi2: 4.177000783691764
[2024-05-16 01:01:43] 2024-05-15 23:01:25,879 | INFO     | current chi2=4.177000783691764 (change=-0.0034345403775006347 %)
[2024-05-16 01:01:43] 2024-05-15 23:01:25,879 | INFO     | right removable region: 199
[2024-05-16 01:01:43] 2024-05-15 23:01:25,880 | INFO     | model: linear, x: [1715801898.0, 1715801959.0, 1715802020.0, 1715802081.0, 1715802142.0, 1715802203.0, 1715802264.0, 1715802325.0, 1715802386.0, 1715802447.0, 1715
[2024-05-16 01:01:43] 2024-05-15 23:01:25,880 | INFO     | sum of square deviations: 2480604650.0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,881 | INFO     | sum of deviations: 46217757089.000015
[2024-05-16 01:01:43] 2024-05-15 23:01:25,881 | INFO     | mean x: 1715807967.5
[2024-05-16 01:01:43] 2024-05-15 23:01:25,881 | INFO     | mean y: 2330013.1
[2024-05-16 01:01:43] 2024-05-15 23:01:25,881 | INFO     | -- intersect: -31966003132.32317
[2024-05-16 01:01:43] 2024-05-15 23:01:25,881 | INFO     | intersect: -31966003132.32317
[2024-05-16 01:01:43] 2024-05-15 23:01:25,881 | INFO     | chi2: 1.6111733116390994
[2024-05-16 01:01:43] 2024-05-15 23:01:25,882 | INFO     | current chi2=1.6111733116390994 (change=61.42618276903974 %)
[2024-05-16 01:01:43] 2024-05-15 23:01:25,882 | INFO     | model: linear, x: [1715802203.0, 1715802264.0, 1715802325.0, 1715802386.0, 1715802447.0, 1715802508.0, 1715802569.0, 1715802630.0, 1715802691.0, 1715802752.0, 1715
[2024-05-16 01:01:43] 2024-05-15 23:01:25,882 | INFO     | sum of square deviations: 2299168690.0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,883 | INFO     | sum of deviations: 6849085551.000001
[2024-05-16 01:01:43] 2024-05-15 23:01:25,883 | INFO     | mean x: 1715808120.0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,883 | INFO     | mean y: 2363106.9743589745
[2024-05-16 01:01:43] 2024-05-15 23:01:25,883 | INFO     | -- intersect: -5108926314.3253355
[2024-05-16 01:01:43] 2024-05-15 23:01:25,883 | INFO     | intersect: -5108926314.3253355
[2024-05-16 01:01:43] 2024-05-15 23:01:25,883 | INFO     | chi2: 0.0504153027702751
[2024-05-16 01:01:43] 2024-05-15 23:01:25,883 | INFO     | current chi2=0.0504153027702751 (change=96.87089511686449 %)
[2024-05-16 01:01:43] 2024-05-15 23:01:25,883 | INFO     | model: linear, x: [1715802508.0, 1715802569.0, 1715802630.0, 1715802691.0, 1715802752.0, 1715802813.0, 1715802874.0, 1715802935.0, 1715802996.0, 1715803057.0, 1715
[2024-05-16 01:01:43] 2024-05-15 23:01:25,883 | INFO     | sum of square deviations: 2126802667.5
[2024-05-16 01:01:43] 2024-05-15 23:01:25,884 | INFO     | sum of deviations: 1425449037.0000002
[2024-05-16 01:01:43] 2024-05-15 23:01:25,884 | INFO     | mean x: 1715808272.5
[2024-05-16 01:01:43] 2024-05-15 23:01:25,884 | INFO     | mean y: 2367854.3789473684
[2024-05-16 01:01:43] 2024-05-15 23:01:25,884 | INFO     | -- intersect: -1147620006.3127682
[2024-05-16 01:01:43] 2024-05-15 23:01:25,884 | INFO     | intersect: -1147620006.3127682
[2024-05-16 01:01:43] 2024-05-15 23:01:25,884 | INFO     | chi2: 0.0030253854789251584
[2024-05-16 01:01:43] 2024-05-15 23:01:25,884 | INFO     | current chi2=0.0030253854789251584 (change=93.99907307368403 %)
[2024-05-16 01:01:43] 2024-05-15 23:01:25,884 | INFO     | model: linear, x: [1715802813.0, 1715802874.0, 1715802935.0, 1715802996.0, 1715803057.0, 1715803118.0, 1715803179.0, 1715803240.0, 1715803301.0, 1715803362.0, 1715
[2024-05-16 01:01:43] 2024-05-15 23:01:25,884 | INFO     | sum of square deviations: 1963274020.0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,885 | INFO     | sum of deviations: 797212660.0000002
[2024-05-16 01:01:43] 2024-05-15 23:01:25,885 | INFO     | mean x: 1715808425.0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,885 | INFO     | mean y: 2368438.1621621624
[2024-05-16 01:01:43] 2024-05-15 23:01:25,885 | INFO     | -- intersect: -694357635.0248405
[2024-05-16 01:01:43] 2024-05-15 23:01:25,885 | INFO     | intersect: -694357635.0248405
[2024-05-16 01:01:43] 2024-05-15 23:01:25,885 | INFO     | chi2: 0.0026718289458605195
[2024-05-16 01:01:43] 2024-05-15 23:01:25,885 | INFO     | current chi2=0.0026718289458605195 (change=11.686330073556395 %)
[2024-05-16 01:01:43] 2024-05-15 23:01:25,885 | INFO     | left removable region: 40
[2024-05-16 01:01:43] 2024-05-15 23:01:25,885 | INFO     | model: linear, x: [1715804033.0, 1715804094.0, 1715804155.0, 1715804216.0, 1715804277.0, 1715804338.0, 1715804399.0, 1715804460.0, 1715804521.0, 1715804582.0, 1715
[2024-05-16 01:01:43] 2024-05-15 23:01:25,886 | INFO     | sum of square deviations: 1246386160.0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,886 | INFO     | sum of deviations: 2199007056.0000005
[2024-05-16 01:01:43] 2024-05-15 23:01:25,886 | INFO     | mean x: 1715808852.0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,886 | INFO     | mean y: 2366337.93081761
[2024-05-16 01:01:43] 2024-05-15 23:01:25,886 | INFO     | -- intersect: -3024846169.2228727
[2024-05-16 01:01:43] 2024-05-15 23:01:25,886 | INFO     | intersect: -3024846169.2228727
[2024-05-16 01:01:43] 2024-05-15 23:01:25,886 | INFO     | chi2: 0.0006808100159733974
[2024-05-16 01:01:43] 2024-05-15 23:01:25,886 | INFO     | -- intersect: -3024846169.2228727
[2024-05-16 01:01:43] 2024-05-15 23:01:25,886 | INFO     | current memory leak: 1.76 B/s (using 159 data points, chi2=0.00)
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | ..............................
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | . Timing measurements:
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | . get job = 0 s
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | . initial setup = 1 s
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | . payload setup = 5 s
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | . stage-in = 0 s
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | . payload execution = 12489 s
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | . stage-out = 0 s
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | . log creation = 0 s
[2024-05-16 01:01:43] 2024-05-15 23:01:25,887 | INFO     | ..............................
[2024-05-16 01:01:43] 2024-05-15 23:01:25,942 | INFO     | 
[2024-05-16 01:01:43] 2024-05-15 23:01:25,942 | INFO     | job summary report
[2024-05-16 01:01:43] 2024-05-15 23:01:25,942 | INFO     | --------------------------------------------------
[2024-05-16 01:01:43] 2024-05-15 23:01:25,942 | INFO     | PanDA job id: 6205828505
[2024-05-16 01:01:43] 2024-05-15 23:01:25,942 | INFO     | task id: 38776146
[2024-05-16 01:01:43] 2024-05-15 23:01:25,942 | INFO     | errors: (none)
[2024-05-16 01:01:43] 2024-05-15 23:01:25,942 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | pilot state: finished 
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | transexitcode: 0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | exeerrorcode: 0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | exeerrordiag: 
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | exitcode: 0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | exitmsg: OK
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | cpuconsumptiontime: 46955 s
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | nevents: 400
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | neventsw: 0
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | pid: 2146402
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | pgrp: 2146402
[2024-05-16 01:01:43] 2024-05-15 23:01:25,943 | INFO     | corecount: 4
[2024-05-16 01:01:43] 2024-05-15 23:01:25,944 | INFO     | event service: False
[2024-05-16 01:01:43] 2024-05-15 23:01:25,944 | INFO     | sizes: {0: 2392132, 4: 2392338, 11: 2392366, 12498: 2422124, 12499: 2431162, 12503: 2431276}
[2024-05-16 01:01:43] 2024-05-15 23:01:25,944 | INFO     | --------------------------------------------------
[2024-05-16 01:01:43] 2024-05-15 23:01:25,944 | INFO     | 
[2024-05-16 01:01:43] 2024-05-15 23:01:25,944 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-16 01:01:43] 2024-05-15 23:01:25,963 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,964 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | job 6205828505 has completed (purged errors)
[2024-05-16 01:01:43] 2024-05-15 23:01:25,965 | INFO     | overall cleanup function is called
[2024-05-16 01:01:43] 2024-05-15 23:01:26,973 | INFO     | --- collectZombieJob: --- 10, [2146402]
[2024-05-16 01:01:43] 2024-05-15 23:01:26,973 | INFO     | zombie collector waiting for pid 2146402
[2024-05-16 01:01:43] 2024-05-15 23:01:26,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 01:01:43] 2024-05-15 23:01:27,978 | INFO     | collected zombie processes
[2024-05-16 01:01:43] 2024-05-15 23:01:27,978 | INFO     | will now attempt to kill all subprocesses of pid=2146402
[2024-05-16 01:01:43] 2024-05-15 23:01:28,232 | INFO     | process IDs to be killed: [2146402] (in reverse order)
[2024-05-16 01:01:43] 2024-05-15 23:01:28,418 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 01:01:43] 2024-05-15 23:01:28,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 01:01:43] 2024-05-15 23:01:28,434 | INFO     | did not find any defunct processes belonging to 2146402
[2024-05-16 01:01:43] 2024-05-15 23:01:28,446 | INFO     | did not find any defunct processes belonging to 2146402
[2024-05-16 01:01:43] 2024-05-15 23:01:28,446 | INFO     | ready for new job
[2024-05-16 01:01:43] 2024-05-15 23:01:28,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 01:01:43] 2024-05-15 23:01:28,447 | INFO     | *************************************
[2024-05-16 01:01:43] 2024-05-15 23:01:28,448 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 01:01:43] 2024-05-15 23:01:28,448 | INFO     | *************************************
[2024-05-16 01:01:43] 2024-05-15 23:01:28,448 | INFO     | 
[2024-05-16 01:01:43] 2024-05-15 23:01:28,452 | INFO     | architecture information:
[2024-05-16 01:01:43] 2024-05-15 23:01:28,453 | INFO     | executing command: cat /etc/os-release
[2024-05-16 01:01:43] 2024-05-15 23:01:28,463 | INFO     | cat /etc/os-release:
[2024-05-16 01:01:43] NAME="CentOS Linux"
[2024-05-16 01:01:43] VERSION="7 (Core)"
[2024-05-16 01:01:43] ID="centos"
[2024-05-16 01:01:43] ID_LIKE="rhel fedora"
[2024-05-16 01:01:43] VERSION_ID="7"
[2024-05-16 01:01:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 01:01:43] ANSI_COLOR="0;31"
[2024-05-16 01:01:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 01:01:43] HOME_URL="https://www.centos.org/"
[2024-05-16 01:01:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 01:01:43] 
[2024-05-16 01:01:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 01:01:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 01:01:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 01:01:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 01:01:43] 
[2024-05-16 01:01:43] 2024-05-15 23:01:28,463 | INFO     | *************************************
[2024-05-16 01:01:43] 2024-05-15 23:01:28,966 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-16 01:01:43] 2024-05-15 23:01:28,983 | INFO     | sufficient remaining disk space (3014564773888 B)
[2024-05-16 01:01:43] 2024-05-15 23:01:28,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 01:01:43] 2024-05-15 23:01:28,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 01:01:43] 2024-05-15 23:01:28,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 01:01:43] 2024-05-15 23:01:28,984 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 01:01:43] 2024-05-15 23:01:28,984 | INFO     | aborting loop
[2024-05-16 01:01:43] 2024-05-15 23:01:28,985 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 01:01:43] 2024-05-15 23:01:28,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 01:01:43] 2024-05-15 23:01:28,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 01:01:43] 2024-05-15 23:01:29,002 | INFO     | all payload control threads have been joined
[2024-05-16 01:01:43] 2024-05-15 23:01:29,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 01:01:43] 2024-05-15 23:01:29,934 | INFO     | all data control threads have been joined
[2024-05-16 01:01:43] 2024-05-15 23:01:29,988 | INFO     | [job] retrieve thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:29,989 | INFO     | [job] job monitor thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,007 | INFO     | [payload] control thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,112 | INFO     | [job] validate thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,185 | INFO     | [data] copytool_in thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,378 | INFO     | [payload] failed_post thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,631 | INFO     | all job control threads have been joined
[2024-05-16 01:01:43] 2024-05-15 23:01:30,673 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,734 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,887 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,939 | INFO     | [data] control thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,950 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:30,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 01:01:43] 2024-05-15 23:01:31,324 | INFO     | [payload] validate_post thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:31,518 | INFO     | [data] copytool_out thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:31,636 | INFO     | [job] control thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:31,957 | INFO     | [job] queue monitor thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:32,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 01:01:43] 2024-05-15 23:01:36,090 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 01:01:43] 2024-05-15 23:01:37,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47478869058624)>', '<ExcThread(monitor, started 47479046612736)>']
[2024-05-16 01:01:43] 2024-05-15 23:01:38,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 01:01:43] 2024-05-15 23:01:38,026 | INFO     | [monitor] control thread has ended
[2024-05-16 01:01:43] 2024-05-15 23:01:42,809 | INFO     | all workflow threads have been joined
[2024-05-16 01:01:43] 2024-05-15 23:01:42,809 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 01:01:43] 2024-05-15 23:01:42,810 | INFO     | traces error code: 0
[2024-05-16 01:01:43] 2024-05-15 23:01:42,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 01:01:43] 2024-05-15 23:01:42,872 [wrapper] ==== pilot stdout END ====
[2024-05-16 01:01:43] 2024-05-15 23:01:42,874 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 01:01:43] 2024-05-15 23:01:42,876 [wrapper] pilotpid: 2138446
[2024-05-16 01:01:43] 2024-05-15 23:01:42,877 [wrapper] Pilot exit status: 0
[2024-05-16 01:01:43] 2024-05-15 23:01:42,894 [wrapper] pandaids: 6205828505
[2024-05-16 01:01:43] 2024-05-15 23:01:43,011 [wrapper] cleanup: SIGTERM to supervisor_pilot 3341132 2138447
[2024-05-16 01:01:43] 2024-05-15 23:01:43,014 [wrapper] Test setup, not cleaning
[2024-05-16 01:01:43] 2024-05-15 23:01:43,016 [wrapper] ==== wrapper stdout END ====
[2024-05-16 01:01:43] 2024-05-15 23:01:43,018 [wrapper] ==== wrapper stderr END ====
[2024-05-16 01:01:43] 2024-05-15 23:01:43,024 [wrapper] apfmon messages muted
[2024-05-16 01:01:43]  *** Error codes and diagnostics ***
[2024-05-16 01:01:43]     "exeErrorCode": 0,
[2024-05-16 01:01:43]     "exeErrorDiag": "",
[2024-05-16 01:01:43]     "pilotErrorCode": 0,
[2024-05-16 01:01:43]     "pilotErrorDiag": "",
[2024-05-16 01:01:43]  *** Listing of results directory ***
[2024-05-16 01:01:43] total 877920
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc      5633 May 13 12:57 queuedata.json
[2024-05-16 01:01:43] -rwx------ 1 boinc boinc     32251 May 13 12:59 runpilot2-wrapper.sh
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc    467845 May 13 12:59 pilot3.tar.gz
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc       100 May 15 21:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 01:01:43] -rwxr-xr-x 1 boinc boinc      7986 May 15 21:32 run_atlas
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc       105 May 15 21:32 job.xml
[2024-05-16 01:01:43] -rw-r--r-- 2 boinc boinc 615230835 May 15 21:32 EVNT.38776140._000212.pool.root.1
[2024-05-16 01:01:43] -rw-r--r-- 2 boinc boinc     17537 May 15 21:32 start_atlas.sh
[2024-05-16 01:01:43] drwxrwx--x 2 boinc boinc      4096 May 15 21:32 shared
[2024-05-16 01:01:43] -rw-r--r-- 2 boinc boinc    479988 May 15 21:32 input.tar.gz
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc      6644 May 15 21:32 init_data.xml
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc         0 May 15 21:32 boinc_lockfile
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc      2611 May 15 21:32 pandaJob.out
[2024-05-16 01:01:43] -rw------- 1 boinc boinc       424 May 15 21:32 setup.sh.local
[2024-05-16 01:01:43] -rw------- 1 boinc boinc   1011323 May 15 21:32 agis_schedconf.cvmfs.json
[2024-05-16 01:01:43] -rw------- 1 boinc boinc   1324701 May 15 21:32 cric_ddmendpoints.json
[2024-05-16 01:01:43] drwx------ 4 boinc boinc      4096 May 15 21:32 pilot3
[2024-05-16 01:01:43] -rw------- 1 boinc boinc 276997034 May 16 01:00 HITS.38776146._005259.pool.root.1
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc       531 May 16 01:01 boinc_task_state.xml
[2024-05-16 01:01:43] -rw------- 1 boinc boinc      1041 May 16 01:01 memory_monitor_summary.json
[2024-05-16 01:01:43] -rw------- 1 boinc boinc         0 May 16 01:01 agis_ddmendpoints.agis.ALL.json
[2024-05-16 01:01:43] -rw------- 1 boinc boinc    313478 May 16 01:01 log.38776146._005259.job.log.tgz.1
[2024-05-16 01:01:43] -rw------- 1 boinc boinc        95 May 16 01:01 pilot_heartbeat.json
[2024-05-16 01:01:43] -rw------- 1 boinc boinc      7727 May 16 01:01 heartbeat.json
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc      8192 May 16 01:01 boinc_mmap_file
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc        28 May 16 01:01 wrapper_checkpoint.txt
[2024-05-16 01:01:43] -rw------- 1 boinc boinc      4345 May 16 01:01 pilotlog.txt
[2024-05-16 01:01:43] -rw------- 1 boinc boinc   1304222 May 16 01:01 log.38776146._005259.job.log.1
[2024-05-16 01:01:43] -rw------- 1 boinc boinc       357 May 16 01:01 output.list
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc       620 May 16 01:01 runtime_log
[2024-05-16 01:01:43] -rw------- 1 boinc boinc   1638400 May 16 01:01 result.tar.gz
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc     11410 May 16 01:01 runtime_log.err
[2024-05-16 01:01:43] -rw------- 1 boinc boinc       658 May 16 01:01 2aAODmBaiQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmrSKKDm6ia4Fm.diag
[2024-05-16 01:01:43] -rw-r--r-- 1 boinc boinc     21337 May 16 01:01 stderr.txt
[2024-05-16 01:01:43] HITS file was successfully produced:
[2024-05-16 01:01:43] -rw------- 1 boinc boinc 276997034 May 16 01:00 shared/HITS.pool.root.1
[2024-05-16 01:01:43]  *** Contents of shared directory: ***
[2024-05-16 01:01:43] total 873420
[2024-05-16 01:01:43] -rw-r--r-- 2 boinc boinc 615230835 May 15 21:32 ATLAS.root_0
[2024-05-16 01:01:43] -rw-r--r-- 2 boinc boinc     17537 May 15 21:32 start_atlas.sh
[2024-05-16 01:01:43] -rw-r--r-- 2 boinc boinc    479988 May 15 21:32 input.tar.gz
[2024-05-16 01:01:43] -rw------- 1 boinc boinc 276997034 May 16 01:00 HITS.pool.root.1
[2024-05-16 01:01:43] -rw------- 1 boinc boinc   1638400 May 16 01:01 result.tar.gz
01:01:45 (2133832): run_atlas exited; CPU time 46531.697224
01:01:45 (2133832): called boinc_finish(0)

</stderr_txt>
]]>

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