Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:04:36 (1002755): wrapper (7.7.26015): starting
22:04:36 (1002755): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 22:04:36] Arguments: --nthreads 4
[2024-05-15 22:04:36] Threads: 4
[2024-05-15 22:04:36] Checking for CVMFS
[2024-05-15 22:04:36] No cvmfs_config command found, will try listing directly
[2024-05-15 22:04:36] CVMFS is ok
[2024-05-15 22:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 22:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 22:04:36] Further information can be found at the LHC@home message board.
[2024-05-15 22:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 22:04:36] Checking for apptainer binary...
[2024-05-15 22:04:36] which: no apptainer in ((null))
[2024-05-15 22:04:36] apptainer is not installed, using version from CVMFS
[2024-05-15 22:04:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 22:04:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-15 22:04:37] apptainer works
[2024-05-15 22:04:37] Set ATHENA_PROC_NUMBER=4
[2024-05-15 22:04:37] Set ATHENA_CORE_NUMBER=4
[2024-05-15 22:04:37] Starting ATLAS job with PandaID=6205828428
[2024-05-15 22:04:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 02:02:44]  *** The last 200 lines of the pilot log: ***
[2024-05-16 02:02:44] 2024-05-16 00:02:27,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 02:02:44] 2024-05-16 00:02:27,068 | INFO     | fitting pss+swap vs Time
[2024-05-16 02:02:44] 2024-05-16 00:02:27,069 | INFO     | model: linear, x: [1715803516.0, 1715803577.0, 1715803638.0, 1715803699.0, 1715803760.0, 1715803821.0, 1715803882.0, 1715803943.0, 1715804004.0, 1715804065.0, 1715
[2024-05-16 02:02:44] 2024-05-16 00:02:27,069 | INFO     | sum of square deviations: 3972995422.5
[2024-05-16 02:02:44] 2024-05-16 00:02:27,070 | INFO     | sum of deviations: 96863801827.5
[2024-05-16 02:02:44] 2024-05-16 00:02:27,070 | INFO     | mean x: 1715810622.5
[2024-05-16 02:02:44] 2024-05-16 00:02:27,071 | INFO     | mean y: 2272451.106837607
[2024-05-16 02:02:44] 2024-05-16 00:02:27,071 | INFO     | -- intersect: -41830129159.55961
[2024-05-16 02:02:44] 2024-05-16 00:02:27,071 | INFO     | intersect: -41830129159.55961
[2024-05-16 02:02:44] 2024-05-16 00:02:27,071 | INFO     | chi2: 5.107871896927259
[2024-05-16 02:02:44] 2024-05-16 00:02:27,071 | INFO     | model: linear, x: [1715803516.0, 1715803577.0, 1715803638.0, 1715803699.0, 1715803760.0, 1715803821.0, 1715803882.0, 1715803943.0, 1715804004.0, 1715804065.0, 1715
[2024-05-16 02:02:44] 2024-05-16 00:02:27,072 | INFO     | sum of square deviations: 3723716330.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,073 | INFO     | sum of deviations: 109386415974.00002
[2024-05-16 02:02:44] 2024-05-16 00:02:27,074 | INFO     | mean x: 1715810470.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,074 | INFO     | mean y: 2279953.1834061136
[2024-05-16 02:02:44] 2024-05-16 00:02:27,074 | INFO     | -- intersect: -50400688793.892044
[2024-05-16 02:02:44] 2024-05-16 00:02:27,074 | INFO     | intersect: -50400688793.892044
[2024-05-16 02:02:44] 2024-05-16 00:02:27,074 | INFO     | chi2: 4.309475608014238
[2024-05-16 02:02:44] 2024-05-16 00:02:27,074 | INFO     | current chi2=4.309475608014238 (change=15.630703060374557 %)
[2024-05-16 02:02:44] 2024-05-16 00:02:27,074 | INFO     | right removable region: 228
[2024-05-16 02:02:44] 2024-05-16 00:02:27,075 | INFO     | model: linear, x: [1715803821.0, 1715803882.0, 1715803943.0, 1715804004.0, 1715804065.0, 1715804126.0, 1715804187.0, 1715804248.0, 1715804309.0, 1715804370.0, 1715
[2024-05-16 02:02:44] 2024-05-16 00:02:27,075 | INFO     | sum of square deviations: 3723716330.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,076 | INFO     | sum of deviations: 41464568281.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,076 | INFO     | mean x: 1715810775.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,077 | INFO     | mean y: 2306266.497816594
[2024-05-16 02:02:44] 2024-05-16 00:02:27,077 | INFO     | -- intersect: -19103701477.454857
[2024-05-16 02:02:44] 2024-05-16 00:02:27,077 | INFO     | intersect: -19103701477.454857
[2024-05-16 02:02:44] 2024-05-16 00:02:27,077 | INFO     | chi2: 2.50805506326748
[2024-05-16 02:02:44] 2024-05-16 00:02:27,077 | INFO     | current chi2=2.50805506326748 (change=50.89823876013316 %)
[2024-05-16 02:02:44] 2024-05-16 00:02:27,077 | INFO     | model: linear, x: [1715804126.0, 1715804187.0, 1715804248.0, 1715804309.0, 1715804370.0, 1715804431.0, 1715804492.0, 1715804553.0, 1715804614.0, 1715804675.0, 1715
[2024-05-16 02:02:44] 2024-05-16 00:02:27,078 | INFO     | sum of square deviations: 3485088600.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,079 | INFO     | sum of deviations: -3845436004.499998
[2024-05-16 02:02:44] 2024-05-16 00:02:27,079 | INFO     | mean x: 1715810927.5
[2024-05-16 02:02:44] 2024-05-16 00:02:27,079 | INFO     | mean y: 2335225.2008928573
[2024-05-16 02:02:44] 2024-05-16 00:02:27,079 | INFO     | -- intersect: 1895555706.7470539
[2024-05-16 02:02:44] 2024-05-16 00:02:27,079 | INFO     | intersect: 1895555706.7470539
[2024-05-16 02:02:44] 2024-05-16 00:02:27,080 | INFO     | chi2: 0.9101248309928385
[2024-05-16 02:02:44] 2024-05-16 00:02:27,080 | INFO     | current chi2=0.9101248309928385 (change=63.711927847105045 %)
[2024-05-16 02:02:44] 2024-05-16 00:02:27,080 | INFO     | model: linear, x: [1715804431.0, 1715804492.0, 1715804553.0, 1715804614.0, 1715804675.0, 1715804736.0, 1715804797.0, 1715804858.0, 1715804919.0, 1715804980.0, 1715
[2024-05-16 02:02:44] 2024-05-16 00:02:27,080 | INFO     | sum of square deviations: 3256879670.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,082 | INFO     | sum of deviations: -11121478032.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,082 | INFO     | mean x: 1715811080.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,082 | INFO     | mean y: 2340042.0684931506
[2024-05-16 02:02:44] 2024-05-16 00:02:27,082 | INFO     | -- intersect: 5861431309.4109535
[2024-05-16 02:02:44] 2024-05-16 00:02:27,082 | INFO     | intersect: 5861431309.4109535
[2024-05-16 02:02:44] 2024-05-16 00:02:27,082 | INFO     | chi2: 0.8398209772119876
[2024-05-16 02:02:44] 2024-05-16 00:02:27,082 | INFO     | current chi2=0.8398209772119876 (change=7.724638575585035 %)
[2024-05-16 02:02:44] 2024-05-16 00:02:27,082 | INFO     | left removable region: 30
[2024-05-16 02:02:44] 2024-05-16 00:02:27,083 | INFO     | model: linear, x: [1715805346.0, 1715805407.0, 1715805468.0, 1715805529.0, 1715805590.0, 1715805651.0, 1715805712.0, 1715805773.0, 1715805834.0, 1715805895.0, 1715
[2024-05-16 02:02:44] 2024-05-16 00:02:27,083 | INFO     | sum of square deviations: 2406926989.5
[2024-05-16 02:02:44] 2024-05-16 00:02:27,083 | INFO     | sum of deviations: 1262452096.0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,083 | INFO     | mean x: 1715811354.5
[2024-05-16 02:02:44] 2024-05-16 00:02:27,084 | INFO     | mean y: 2350779.282828283
[2024-05-16 02:02:44] 2024-05-16 00:02:27,084 | INFO     | -- intersect: -897605742.1566118
[2024-05-16 02:02:44] 2024-05-16 00:02:27,084 | INFO     | intersect: -897605742.1566118
[2024-05-16 02:02:44] 2024-05-16 00:02:27,084 | INFO     | chi2: 0.0004159367705883316
[2024-05-16 02:02:44] 2024-05-16 00:02:27,084 | INFO     | -- intersect: -897605742.1566118
[2024-05-16 02:02:44] 2024-05-16 00:02:27,084 | INFO     | current memory leak: 0.52 B/s (using 198 data points, chi2=0.00)
[2024-05-16 02:02:44] 2024-05-16 00:02:27,084 | INFO     | ..............................
[2024-05-16 02:02:44] 2024-05-16 00:02:27,084 | INFO     | . Timing measurements:
[2024-05-16 02:02:44] 2024-05-16 00:02:27,084 | INFO     | . get job = 0 s
[2024-05-16 02:02:44] 2024-05-16 00:02:27,085 | INFO     | . initial setup = 1 s
[2024-05-16 02:02:44] 2024-05-16 00:02:27,085 | INFO     | . payload setup = 6 s
[2024-05-16 02:02:44] 2024-05-16 00:02:27,085 | INFO     | . stage-in = 0 s
[2024-05-16 02:02:44] 2024-05-16 00:02:27,085 | INFO     | . payload execution = 14224 s
[2024-05-16 02:02:44] 2024-05-16 00:02:27,085 | INFO     | . stage-out = 0 s
[2024-05-16 02:02:44] 2024-05-16 00:02:27,085 | INFO     | . log creation = 0 s
[2024-05-16 02:02:44] 2024-05-16 00:02:27,085 | INFO     | ..............................
[2024-05-16 02:02:44] 2024-05-16 00:02:27,148 | INFO     | 
[2024-05-16 02:02:44] 2024-05-16 00:02:27,149 | INFO     | job summary report
[2024-05-16 02:02:44] 2024-05-16 00:02:27,149 | INFO     | --------------------------------------------------
[2024-05-16 02:02:44] 2024-05-16 00:02:27,149 | INFO     | PanDA job id: 6205828428
[2024-05-16 02:02:44] 2024-05-16 00:02:27,149 | INFO     | task id: 38776146
[2024-05-16 02:02:44] 2024-05-16 00:02:27,149 | INFO     | errors: (none)
[2024-05-16 02:02:44] 2024-05-16 00:02:27,149 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 02:02:44] 2024-05-16 00:02:27,149 | INFO     | pilot state: finished 
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | transexitcode: 0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | exeerrorcode: 0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | exeerrordiag: 
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | exitcode: 0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | exitmsg: OK
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | cpuconsumptiontime: 54098 s
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | nevents: 400
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | neventsw: 0
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | pid: 1022356
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | pgrp: 1022356
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | corecount: 4
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | event service: False
[2024-05-16 02:02:44] 2024-05-16 00:02:27,150 | INFO     | sizes: {0: 2392191, 1: 2392191, 5: 2392425, 11: 2392481, 14234: 2423051, 14236: 2432033, 14237: 2432217, 14242: 2432387}
[2024-05-16 02:02:44] 2024-05-16 00:02:27,151 | INFO     | --------------------------------------------------
[2024-05-16 02:02:44] 2024-05-16 00:02:27,151 | INFO     | 
[2024-05-16 02:02:44] 2024-05-16 00:02:27,151 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-05-16 02:02:44] 2024-05-16 00:02:27,268 | WARNING  | process 1022356 is no longer using CPU - aborting
[2024-05-16 02:02:44] 2024-05-16 00:02:27,268 | INFO     | aborting job monitoring since job object (job id=6205828428) has expired
[2024-05-16 02:02:44] 2024-05-16 00:02:27,285 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,285 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,285 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,285 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,286 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 02:02:44] 2024-05-16 00:02:27,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,287 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 02:02:44] 2024-05-16 00:02:27,287 | INFO     | job 6205828428 has completed (purged errors)
[2024-05-16 02:02:44] 2024-05-16 00:02:27,287 | INFO     | overall cleanup function is called
[2024-05-16 02:02:44] 2024-05-16 00:02:28,294 | INFO     | --- collectZombieJob: --- 10, [1022356]
[2024-05-16 02:02:44] 2024-05-16 00:02:28,294 | INFO     | zombie collector waiting for pid 1022356
[2024-05-16 02:02:44] 2024-05-16 00:02:28,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 02:02:44] 2024-05-16 00:02:29,299 | INFO     | collected zombie processes
[2024-05-16 02:02:44] 2024-05-16 00:02:29,299 | INFO     | will now attempt to kill all subprocesses of pid=1022356
[2024-05-16 02:02:44] 2024-05-16 00:02:29,530 | INFO     | process IDs to be killed: [1022356] (in reverse order)
[2024-05-16 02:02:44] 2024-05-16 00:02:29,729 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 02:02:44] 2024-05-16 00:02:29,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 02:02:44] 2024-05-16 00:02:29,749 | INFO     | did not find any defunct processes belonging to 1022356
[2024-05-16 02:02:44] 2024-05-16 00:02:29,763 | INFO     | did not find any defunct processes belonging to 1022356
[2024-05-16 02:02:44] 2024-05-16 00:02:29,764 | INFO     | ready for new job
[2024-05-16 02:02:44] 2024-05-16 00:02:29,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 02:02:44] 2024-05-16 00:02:29,766 | INFO     | *************************************
[2024-05-16 02:02:44] 2024-05-16 00:02:29,766 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 02:02:44] 2024-05-16 00:02:29,766 | INFO     | *************************************
[2024-05-16 02:02:44] 2024-05-16 00:02:29,766 | INFO     | 
[2024-05-16 02:02:44] 2024-05-16 00:02:29,773 | INFO     | architecture information:
[2024-05-16 02:02:44] 2024-05-16 00:02:29,773 | INFO     | executing command: cat /etc/os-release
[2024-05-16 02:02:44] 2024-05-16 00:02:29,793 | INFO     | cat /etc/os-release:
[2024-05-16 02:02:44] NAME="CentOS Linux"
[2024-05-16 02:02:44] VERSION="7 (Core)"
[2024-05-16 02:02:44] ID="centos"
[2024-05-16 02:02:44] ID_LIKE="rhel fedora"
[2024-05-16 02:02:44] VERSION_ID="7"
[2024-05-16 02:02:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 02:02:44] ANSI_COLOR="0;31"
[2024-05-16 02:02:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 02:02:44] HOME_URL="https://www.centos.org/"
[2024-05-16 02:02:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 02:02:44] 
[2024-05-16 02:02:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 02:02:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 02:02:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 02:02:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 02:02:44] 
[2024-05-16 02:02:44] 2024-05-16 00:02:29,793 | INFO     | *************************************
[2024-05-16 02:02:44] 2024-05-16 00:02:30,295 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-05-16 02:02:44] 2024-05-16 00:02:30,319 | INFO     | sufficient remaining disk space (3011807019008 B)
[2024-05-16 02:02:44] 2024-05-16 00:02:30,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 02:02:44] 2024-05-16 00:02:30,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 02:02:44] 2024-05-16 00:02:30,523 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 02:02:44] 2024-05-16 00:02:30,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 02:02:44] 2024-05-16 00:02:30,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 02:02:44] 2024-05-16 00:02:30,593 | INFO     | all payload control threads have been joined
[2024-05-16 02:02:44] 2024-05-16 00:02:30,733 | INFO     | all job control threads have been joined
[2024-05-16 02:02:44] 2024-05-16 00:02:30,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 02:02:44] 2024-05-16 00:02:30,777 | INFO     | aborting loop
[2024-05-16 02:02:44] 2024-05-16 00:02:31,267 | INFO     | all data control threads have been joined
[2024-05-16 02:02:44] 2024-05-16 00:02:31,325 | INFO     | [job] retrieve thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:31,352 | INFO     | [payload] validate_post thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:31,598 | INFO     | [payload] control thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:31,738 | INFO     | [job] control thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:31,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 02:02:44] 2024-05-16 00:02:31,781 | INFO     | [job] job monitor thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:32,035 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:32,141 | INFO     | [job] validate thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:32,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 02:02:44] 2024-05-16 00:02:32,272 | INFO     | [data] control thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:32,284 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:32,310 | INFO     | [payload] failed_post thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:32,374 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:32,573 | INFO     | [data] copytool_in thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:32,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 02:02:44] 2024-05-16 00:02:32,788 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:33,164 | INFO     | [job] queue monitor thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:33,776 | INFO     | [data] copytool_out thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:36,723 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 02:02:44] 2024-05-16 00:02:38,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 48007690720320)>', '<ExcThread(monitor, started 48007861970688)>']
[2024-05-16 02:02:44] 2024-05-16 00:02:38,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 02:02:44] 2024-05-16 00:02:38,563 | INFO     | [monitor] control thread has ended
[2024-05-16 02:02:44] 2024-05-16 00:02:43,261 | INFO     | all workflow threads have been joined
[2024-05-16 02:02:44] 2024-05-16 00:02:43,261 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 02:02:44] 2024-05-16 00:02:43,262 | INFO     | traces error code: 0
[2024-05-16 02:02:44] 2024-05-16 00:02:43,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 02:02:44] 2024-05-16 00:02:43,327 [wrapper] ==== pilot stdout END ====
[2024-05-16 02:02:44] 2024-05-16 00:02:43,330 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 02:02:44] 2024-05-16 00:02:43,333 [wrapper] pilotpid: 1007790
[2024-05-16 02:02:44] 2024-05-16 00:02:43,336 [wrapper] Pilot exit status: 0
[2024-05-16 02:02:44] 2024-05-16 00:02:43,346 [wrapper] pandaids: 6205828428
[2024-05-16 02:02:44] 2024-05-16 00:02:43,479 [wrapper] cleanup: SIGTERM to supervisor_pilot 2348593 1007791
[2024-05-16 02:02:44] 2024-05-16 00:02:43,481 [wrapper] Test setup, not cleaning
[2024-05-16 02:02:44] 2024-05-16 00:02:43,483 [wrapper] ==== wrapper stdout END ====
[2024-05-16 02:02:44] 2024-05-16 00:02:43,486 [wrapper] ==== wrapper stderr END ====
[2024-05-16 02:02:44] 2024-05-16 00:02:43,490 [wrapper] apfmon messages muted
[2024-05-16 02:02:44]  *** Error codes and diagnostics ***
[2024-05-16 02:02:44]     "exeErrorCode": 0,
[2024-05-16 02:02:44]     "exeErrorDiag": "",
[2024-05-16 02:02:44]     "pilotErrorCode": 0,
[2024-05-16 02:02:44]     "pilotErrorDiag": "",
[2024-05-16 02:02:44]  *** Listing of results directory ***
[2024-05-16 02:02:44] total 873936
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc    467845 May 13 12:53 pilot3.tar.gz
[2024-05-16 02:02:44] -rwx------ 1 boinc boinc     32251 May 13 12:55 runpilot2-wrapper.sh
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc      5633 May 13 12:55 queuedata.json
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc       100 May 15 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 02:02:44] -rwxr-xr-x 1 boinc boinc      7986 May 15 22:04 run_atlas
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc       105 May 15 22:04 job.xml
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc      6642 May 15 22:04 init_data.xml
[2024-05-16 02:02:44] -rw-r--r-- 2 boinc boinc 616027809 May 15 22:04 EVNT.38776140._000209.pool.root.1
[2024-05-16 02:02:44] -rw-r--r-- 2 boinc boinc     17537 May 15 22:04 start_atlas.sh
[2024-05-16 02:02:44] drwxrwx--x 2 boinc boinc      4096 May 15 22:04 shared
[2024-05-16 02:02:44] -rw-r--r-- 2 boinc boinc    479987 May 15 22:04 input.tar.gz
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc         0 May 15 22:04 boinc_lockfile
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc      2620 May 15 22:04 pandaJob.out
[2024-05-16 02:02:44] -rw------- 1 boinc boinc       424 May 15 22:04 setup.sh.local
[2024-05-16 02:02:44] -rw------- 1 boinc boinc   1011323 May 15 22:04 agis_schedconf.cvmfs.json
[2024-05-16 02:02:44] -rw------- 1 boinc boinc   1324701 May 15 22:04 cric_ddmendpoints.json
[2024-05-16 02:02:44] drwx------ 4 boinc boinc      4096 May 15 22:04 pilot3
[2024-05-16 02:02:44] -rw------- 1 boinc boinc        95 May 16 02:01 pilot_heartbeat.json
[2024-05-16 02:02:44] -rw------- 1 boinc boinc 271650731 May 16 02:01 HITS.38776146._005184.pool.root.1
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc       531 May 16 02:02 boinc_task_state.xml
[2024-05-16 02:02:44] -rw------- 1 boinc boinc      1042 May 16 02:02 memory_monitor_summary.json
[2024-05-16 02:02:44] -rw------- 1 boinc boinc         0 May 16 02:02 agis_ddmendpoints.agis.ALL.json
[2024-05-16 02:02:44] -rw------- 1 boinc boinc    332607 May 16 02:02 log.38776146._005184.job.log.tgz.1
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc      8192 May 16 02:02 boinc_mmap_file
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc        28 May 16 02:02 wrapper_checkpoint.txt
[2024-05-16 02:02:44] -rw------- 1 boinc boinc      7720 May 16 02:02 heartbeat.json
[2024-05-16 02:02:44] -rw------- 1 boinc boinc      4222 May 16 02:02 pilotlog.txt
[2024-05-16 02:02:44] -rw------- 1 boinc boinc   1517067 May 16 02:02 log.38776146._005184.job.log.1
[2024-05-16 02:02:44] -rw------- 1 boinc boinc       357 May 16 02:02 output.list
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc       620 May 16 02:02 runtime_log
[2024-05-16 02:02:44] -rw------- 1 boinc boinc   1873920 May 16 02:02 result.tar.gz
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc     11410 May 16 02:02 runtime_log.err
[2024-05-16 02:02:44] -rw------- 1 boinc boinc       658 May 16 02:02 FkQODmXWiQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmnrGKDmeuSysn.diag
[2024-05-16 02:02:44] -rw-r--r-- 1 boinc boinc     21333 May 16 02:02 stderr.txt
[2024-05-16 02:02:44] HITS file was successfully produced:
[2024-05-16 02:02:44] -rw------- 1 boinc boinc 271650731 May 16 02:01 shared/HITS.pool.root.1
[2024-05-16 02:02:44]  *** Contents of shared directory: ***
[2024-05-16 02:02:44] total 869208
[2024-05-16 02:02:44] -rw-r--r-- 2 boinc boinc 616027809 May 15 22:04 ATLAS.root_0
[2024-05-16 02:02:44] -rw-r--r-- 2 boinc boinc     17537 May 15 22:04 start_atlas.sh
[2024-05-16 02:02:44] -rw-r--r-- 2 boinc boinc    479987 May 15 22:04 input.tar.gz
[2024-05-16 02:02:44] -rw------- 1 boinc boinc 271650731 May 16 02:01 HITS.pool.root.1
[2024-05-16 02:02:44] -rw------- 1 boinc boinc   1873920 May 16 02:02 result.tar.gz
02:02:46 (1002755): run_atlas exited; CPU time 53739.101503
02:02:46 (1002755): called boinc_finish(0)

</stderr_txt>
]]>

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