Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:09:51 (3069517): wrapper (7.7.26015): starting
19:09:51 (3069517): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 19:09:51] Arguments: --nthreads 4
[2024-05-15 19:09:51] Threads: 4
[2024-05-15 19:09:51] Checking for CVMFS
[2024-05-15 19:09:51] No cvmfs_config command found, will try listing directly
[2024-05-15 19:09:51] CVMFS is ok
[2024-05-15 19:09:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 19:09:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 19:09:51] Further information can be found at the LHC@home message board.
[2024-05-15 19:09:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 19:09:51] Checking for apptainer binary...
[2024-05-15 19:09:51] which: no apptainer in ((null))
[2024-05-15 19:09:51] apptainer is not installed, using version from CVMFS
[2024-05-15 19:09:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 19:09:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-15 19:09:52] apptainer works
[2024-05-15 19:09:52] Set ATHENA_PROC_NUMBER=4
[2024-05-15 19:09:52] Set ATHENA_CORE_NUMBER=4
[2024-05-15 19:09:52] Starting ATLAS job with PandaID=6205828358
[2024-05-15 19:09:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 23:00:33]  *** The last 200 lines of the pilot log: ***
[2024-05-15 23:00:33] 2024-05-15 21:00:16,733 | INFO     | intersect: -54597339673.45685
[2024-05-15 23:00:33] 2024-05-15 21:00:16,734 | INFO     | chi2: 4.343512656113213
[2024-05-15 23:00:33] 2024-05-15 21:00:16,734 | INFO     | current chi2=4.343512656113213 (change=-0.026610068957132856 %)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,734 | INFO     | right removable region: 220
[2024-05-15 23:00:33] 2024-05-15 21:00:16,734 | INFO     | model: linear, x: [1715793333.0, 1715793394.0, 1715793455.0, 1715793516.0, 1715793577.0, 1715793638.0, 1715793699.0, 1715793760.0, 1715793821.0, 1715793882.0, 1715
[2024-05-15 23:00:33] 2024-05-15 21:00:16,735 | INFO     | sum of square deviations: 3346927870.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,736 | INFO     | sum of deviations: 55338624953.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,736 | INFO     | mean x: 1715800043.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,737 | INFO     | mean y: 2331274.850678733
[2024-05-15 23:00:33] 2024-05-15 21:00:16,737 | INFO     | -- intersect: -28366972983.24147
[2024-05-15 23:00:33] 2024-05-15 21:00:16,737 | INFO     | intersect: -28366972983.24147
[2024-05-15 23:00:33] 2024-05-15 21:00:16,737 | INFO     | chi2: 1.7159000758683425
[2024-05-15 23:00:33] 2024-05-15 21:00:16,737 | INFO     | current chi2=1.7159000758683425 (change=60.48459360084733 %)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,738 | INFO     | model: linear, x: [1715793638.0, 1715793699.0, 1715793760.0, 1715793821.0, 1715793882.0, 1715793943.0, 1715794004.0, 1715794065.0, 1715794126.0, 1715794187.0, 1715
[2024-05-15 23:00:33] 2024-05-15 21:00:16,738 | INFO     | sum of square deviations: 3124858590.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,740 | INFO     | sum of deviations: 10453978029.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,740 | INFO     | mean x: 1715800195.5
[2024-05-15 23:00:33] 2024-05-15 21:00:16,740 | INFO     | mean y: 2362100.722222222
[2024-05-15 23:00:33] 2024-05-15 21:00:16,740 | INFO     | -- intersect: -5737717659.466511
[2024-05-15 23:00:33] 2024-05-15 21:00:16,740 | INFO     | intersect: -5737717659.466511
[2024-05-15 23:00:33] 2024-05-15 21:00:16,741 | INFO     | chi2: 0.059692516149087015
[2024-05-15 23:00:33] 2024-05-15 21:00:16,741 | INFO     | current chi2=0.059692516149087015 (change=96.52121257009215 %)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,741 | INFO     | model: linear, x: [1715793943.0, 1715794004.0, 1715794065.0, 1715794126.0, 1715794187.0, 1715794248.0, 1715794309.0, 1715794370.0, 1715794431.0, 1715794492.0, 1715
[2024-05-15 23:00:33] 2024-05-15 21:00:16,741 | INFO     | sum of square deviations: 2912836010.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,743 | INFO     | sum of deviations: 4116730790.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,743 | INFO     | mean x: 1715800348.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,743 | INFO     | mean y: 2366611.3222748814
[2024-05-15 23:00:33] 2024-05-15 21:00:16,743 | INFO     | -- intersect: -2422585599.4629507
[2024-05-15 23:00:33] 2024-05-15 21:00:16,743 | INFO     | intersect: -2422585599.4629507
[2024-05-15 23:00:33] 2024-05-15 21:00:16,744 | INFO     | chi2: 0.0019179178296097386
[2024-05-15 23:00:33] 2024-05-15 21:00:16,744 | INFO     | current chi2=0.0019179178296097386 (change=96.78700454706988 %)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,744 | INFO     | model: linear, x: [1715794248.0, 1715794309.0, 1715794370.0, 1715794431.0, 1715794492.0, 1715794553.0, 1715794614.0, 1715794675.0, 1715794736.0, 1715794797.0, 1715
[2024-05-15 23:00:33] 2024-05-15 21:00:16,744 | INFO     | sum of square deviations: 2710627567.5
[2024-05-15 23:00:33] 2024-05-15 21:00:16,746 | INFO     | sum of deviations: 2857085609.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,746 | INFO     | mean x: 1715800500.5
[2024-05-15 23:00:33] 2024-05-15 21:00:16,746 | INFO     | mean y: 2367559.9029126214
[2024-05-15 23:00:33] 2024-05-15 21:00:16,746 | INFO     | -- intersect: -1806139435.550843
[2024-05-15 23:00:33] 2024-05-15 21:00:16,746 | INFO     | intersect: -1806139435.550843
[2024-05-15 23:00:33] 2024-05-15 21:00:16,747 | INFO     | chi2: 0.0009876750896326287
[2024-05-15 23:00:33] 2024-05-15 21:00:16,747 | INFO     | current chi2=0.0009876750896326287 (change=48.502742172556864 %)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,747 | INFO     | model: linear, x: [1715794553.0, 1715794614.0, 1715794675.0, 1715794736.0, 1715794797.0, 1715794858.0, 1715794919.0, 1715794980.0, 1715795041.0, 1715795102.0, 1715
[2024-05-15 23:00:33] 2024-05-15 21:00:16,747 | INFO     | sum of square deviations: 2518000700.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,749 | INFO     | sum of deviations: 2313763610.9999995
[2024-05-15 23:00:33] 2024-05-15 21:00:16,749 | INFO     | mean x: 1715800653.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,749 | INFO     | mean y: 2367987.5870646765
[2024-05-15 23:00:33] 2024-05-15 21:00:16,749 | INFO     | -- intersect: -1574262676.0348465
[2024-05-15 23:00:33] 2024-05-15 21:00:16,749 | INFO     | intersect: -1574262676.0348465
[2024-05-15 23:00:33] 2024-05-15 21:00:16,750 | INFO     | chi2: 0.000807803059988584
[2024-05-15 23:00:33] 2024-05-15 21:00:16,750 | INFO     | current chi2=0.000807803059988584 (change=18.211660042063944 %)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,750 | INFO     | left removable region: 50
[2024-05-15 23:00:33] 2024-05-15 21:00:16,750 | INFO     | model: linear, x: [1715796078.0, 1715796139.0, 1715796200.0, 1715796261.0, 1715796322.0, 1715796383.0, 1715796444.0, 1715796505.0, 1715796566.0, 1715796627.0, 1715
[2024-05-15 23:00:33] 2024-05-15 21:00:16,750 | INFO     | sum of square deviations: 1523386702.5
[2024-05-15 23:00:33] 2024-05-15 21:00:16,752 | INFO     | sum of deviations: 1675170532.0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,752 | INFO     | mean x: 1715801232.5
[2024-05-15 23:00:33] 2024-05-15 21:00:16,752 | INFO     | mean y: 2367605.8
[2024-05-15 23:00:33] 2024-05-15 21:00:16,752 | INFO     | -- intersect: -1884388828.8835833
[2024-05-15 23:00:33] 2024-05-15 21:00:16,752 | INFO     | intersect: -1884388828.8835833
[2024-05-15 23:00:33] 2024-05-15 21:00:16,752 | INFO     | chi2: 0.0005695093771375251
[2024-05-15 23:00:33] 2024-05-15 21:00:16,753 | INFO     | -- intersect: -1884388828.8835833
[2024-05-15 23:00:33] 2024-05-15 21:00:16,753 | INFO     | current memory leak: 1.10 B/s (using 170 data points, chi2=0.00)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,753 | INFO     | ..............................
[2024-05-15 23:00:33] 2024-05-15 21:00:16,753 | INFO     | . Timing measurements:
[2024-05-15 23:00:33] 2024-05-15 21:00:16,753 | INFO     | . get job = 0 s
[2024-05-15 23:00:33] 2024-05-15 21:00:16,754 | INFO     | . initial setup = 1 s
[2024-05-15 23:00:33] 2024-05-15 21:00:16,754 | INFO     | . payload setup = 5 s
[2024-05-15 23:00:33] 2024-05-15 21:00:16,754 | INFO     | . stage-in = 0 s
[2024-05-15 23:00:33] 2024-05-15 21:00:16,754 | INFO     | . payload execution = 13782 s
[2024-05-15 23:00:33] 2024-05-15 21:00:16,754 | INFO     | . stage-out = 0 s
[2024-05-15 23:00:33] 2024-05-15 21:00:16,754 | INFO     | . log creation = 0 s
[2024-05-15 23:00:33] 2024-05-15 21:00:16,754 | INFO     | ..............................
[2024-05-15 23:00:33] 2024-05-15 21:00:16,917 | INFO     | 
[2024-05-15 23:00:33] 2024-05-15 21:00:16,917 | INFO     | job summary report
[2024-05-15 23:00:33] 2024-05-15 21:00:16,917 | INFO     | --------------------------------------------------
[2024-05-15 23:00:33] 2024-05-15 21:00:16,917 | INFO     | PanDA job id: 6205828358
[2024-05-15 23:00:33] 2024-05-15 21:00:16,917 | INFO     | task id: 38776146
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | errors: (none)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | pilot state: finished 
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | transexitcode: 0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | exeerrorcode: 0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | exeerrordiag: 
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | exitcode: 0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | exitmsg: OK
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | cpuconsumptiontime: 52434 s
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | nevents: 400
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | neventsw: 0
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | pid: 3093912
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | pgrp: 3093912
[2024-05-15 23:00:33] 2024-05-15 21:00:16,918 | INFO     | corecount: 4
[2024-05-15 23:00:33] 2024-05-15 21:00:16,919 | INFO     | event service: False
[2024-05-15 23:00:33] 2024-05-15 21:00:16,919 | INFO     | sizes: {0: 2392072, 1: 2392214, 5: 2392420, 11: 2392476, 13791: 2422908, 13792: 2431892, 13793: 2432076, 13799: 2432246}
[2024-05-15 23:00:33] 2024-05-15 21:00:16,919 | INFO     | --------------------------------------------------
[2024-05-15 23:00:33] 2024-05-15 21:00:16,919 | INFO     | 
[2024-05-15 23:00:33] 2024-05-15 21:00:16,919 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-05-15 23:00:33] 2024-05-15 21:00:16,940 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,940 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,940 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,940 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | job 6205828358 has completed (purged errors)
[2024-05-15 23:00:33] 2024-05-15 21:00:16,941 | INFO     | overall cleanup function is called
[2024-05-15 23:00:33] 2024-05-15 21:00:17,946 | INFO     | --- collectZombieJob: --- 10, [3093912]
[2024-05-15 23:00:33] 2024-05-15 21:00:17,946 | INFO     | zombie collector waiting for pid 3093912
[2024-05-15 23:00:33] 2024-05-15 21:00:17,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 23:00:33] 2024-05-15 21:00:18,946 | INFO     | collected zombie processes
[2024-05-15 23:00:33] 2024-05-15 21:00:18,947 | INFO     | will now attempt to kill all subprocesses of pid=3093912
[2024-05-15 23:00:33] 2024-05-15 21:00:19,151 | INFO     | process IDs to be killed: [3093912] (in reverse order)
[2024-05-15 23:00:33] 2024-05-15 21:00:19,307 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 23:00:33] 2024-05-15 21:00:19,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 23:00:33] 2024-05-15 21:00:19,326 | INFO     | did not find any defunct processes belonging to 3093912
[2024-05-15 23:00:33] 2024-05-15 21:00:19,341 | INFO     | did not find any defunct processes belonging to 3093912
[2024-05-15 23:00:33] 2024-05-15 21:00:19,341 | INFO     | ready for new job
[2024-05-15 23:00:33] 2024-05-15 21:00:19,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 23:00:33] 2024-05-15 21:00:19,344 | INFO     | *************************************
[2024-05-15 23:00:33] 2024-05-15 21:00:19,344 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 23:00:33] 2024-05-15 21:00:19,344 | INFO     | *************************************
[2024-05-15 23:00:33] 2024-05-15 21:00:19,344 | INFO     | 
[2024-05-15 23:00:33] 2024-05-15 21:00:19,351 | INFO     | architecture information:
[2024-05-15 23:00:33] 2024-05-15 21:00:19,351 | INFO     | executing command: cat /etc/os-release
[2024-05-15 23:00:33] 2024-05-15 21:00:19,366 | INFO     | cat /etc/os-release:
[2024-05-15 23:00:33] NAME="CentOS Linux"
[2024-05-15 23:00:33] VERSION="7 (Core)"
[2024-05-15 23:00:33] ID="centos"
[2024-05-15 23:00:33] ID_LIKE="rhel fedora"
[2024-05-15 23:00:33] VERSION_ID="7"
[2024-05-15 23:00:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 23:00:33] ANSI_COLOR="0;31"
[2024-05-15 23:00:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 23:00:33] HOME_URL="https://www.centos.org/"
[2024-05-15 23:00:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 23:00:33] 
[2024-05-15 23:00:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 23:00:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 23:00:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 23:00:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 23:00:33] 
[2024-05-15 23:00:33] 2024-05-15 21:00:19,366 | INFO     | *************************************
[2024-05-15 23:00:33] 2024-05-15 21:00:19,869 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-05-15 23:00:33] 2024-05-15 21:00:19,890 | INFO     | sufficient remaining disk space (2994953256960 B)
[2024-05-15 23:00:33] 2024-05-15 21:00:19,890 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 23:00:33] 2024-05-15 21:00:19,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 23:00:33] 2024-05-15 21:00:20,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 23:00:33] 2024-05-15 21:00:20,100 | INFO     | aborting loop
[2024-05-15 23:00:33] 2024-05-15 21:00:20,331 | INFO     | all payload control threads have been joined
[2024-05-15 23:00:33] 2024-05-15 21:00:20,390 | INFO     | all data control threads have been joined
[2024-05-15 23:00:33] 2024-05-15 21:00:20,714 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 23:00:33] 2024-05-15 21:00:20,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 23:00:33] 2024-05-15 21:00:20,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 23:00:33] 2024-05-15 21:00:20,895 | INFO     | [job] retrieve thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:20,949 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:21,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 23:00:33] 2024-05-15 21:00:21,039 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:21,105 | INFO     | [job] job monitor thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:21,134 | INFO     | all job control threads have been joined
[2024-05-15 23:00:33] 2024-05-15 21:00:21,336 | INFO     | [payload] control thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:21,360 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:21,395 | INFO     | [data] control thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:21,499 | INFO     | [data] copytool_in thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:21,657 | INFO     | [job] validate thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:21,804 | INFO     | [payload] validate_post thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:21,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 23:00:33] 2024-05-15 21:00:21,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 23:00:33] 2024-05-15 21:00:21,932 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:22,139 | INFO     | [job] control thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:22,208 | INFO     | [payload] failed_post thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:22,884 | INFO     | [job] queue monitor thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:23,032 | INFO     | [data] copytool_out thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:25,872 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 23:00:33] 2024-05-15 21:00:27,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47661217117248)>', '<ExcThread(monitor, started 47661723944704)>']
[2024-05-15 23:00:33] 2024-05-15 21:00:27,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 23:00:33] 2024-05-15 21:00:27,748 | INFO     | [monitor] control thread has ended
[2024-05-15 23:00:33] 2024-05-15 21:00:32,173 | INFO     | all workflow threads have been joined
[2024-05-15 23:00:33] 2024-05-15 21:00:32,173 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 23:00:33] 2024-05-15 21:00:32,173 | INFO     | traces error code: 0
[2024-05-15 23:00:33] 2024-05-15 21:00:32,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 23:00:33] 2024-05-15 21:00:32,242 [wrapper] ==== pilot stdout END ====
[2024-05-15 23:00:33] 2024-05-15 21:00:32,244 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 23:00:33] 2024-05-15 21:00:32,246 [wrapper] pilotpid: 3077207
[2024-05-15 23:00:33] 2024-05-15 21:00:32,249 [wrapper] Pilot exit status: 0
[2024-05-15 23:00:33] 2024-05-15 21:00:32,262 [wrapper] pandaids: 6205828358
[2024-05-15 23:00:33] 2024-05-15 21:00:32,375 [wrapper] cleanup: SIGTERM to supervisor_pilot  229075 3077208
[2024-05-15 23:00:33] 2024-05-15 21:00:32,378 [wrapper] Test setup, not cleaning
[2024-05-15 23:00:33] 2024-05-15 21:00:32,379 [wrapper] ==== wrapper stdout END ====
[2024-05-15 23:00:33] 2024-05-15 21:00:32,381 [wrapper] ==== wrapper stderr END ====
[2024-05-15 23:00:33] 2024-05-15 21:00:32,387 [wrapper] apfmon messages muted
[2024-05-15 23:00:33]  *** Error codes and diagnostics ***
[2024-05-15 23:00:33]     "exeErrorCode": 0,
[2024-05-15 23:00:33]     "exeErrorDiag": "",
[2024-05-15 23:00:33]     "pilotErrorCode": 0,
[2024-05-15 23:00:33]     "pilotErrorDiag": "",
[2024-05-15 23:00:33]  *** Listing of results directory ***
[2024-05-15 23:00:33] total 878128
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc    467845 May 13 12:35 pilot3.tar.gz
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc      5633 May 13 12:51 queuedata.json
[2024-05-15 23:00:33] -rwx------ 1 boinc boinc     32251 May 13 12:51 runpilot2-wrapper.sh
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc       100 May 15 19:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 23:00:33] -rwxr-xr-x 1 boinc boinc      7986 May 15 19:09 run_atlas
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc       105 May 15 19:09 job.xml
[2024-05-15 23:00:33] -rw-r--r-- 2 boinc boinc     17537 May 15 19:09 start_atlas.sh
[2024-05-15 23:00:33] drwxrwx--x 2 boinc boinc      4096 May 15 19:09 shared
[2024-05-15 23:00:33] -rw-r--r-- 2 boinc boinc    479994 May 15 19:09 input.tar.gz
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc      6644 May 15 19:09 init_data.xml
[2024-05-15 23:00:33] -rw-r--r-- 2 boinc boinc 616302690 May 15 19:09 EVNT.38776140._000206.pool.root.1
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc         0 May 15 19:09 boinc_lockfile
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc      2613 May 15 19:09 pandaJob.out
[2024-05-15 23:00:33] -rw------- 1 boinc boinc       424 May 15 19:09 setup.sh.local
[2024-05-15 23:00:33] -rw------- 1 boinc boinc   1011281 May 15 19:10 agis_schedconf.cvmfs.json
[2024-05-15 23:00:33] -rw------- 1 boinc boinc   1324701 May 15 19:10 cric_ddmendpoints.json
[2024-05-15 23:00:33] drwx------ 4 boinc boinc      4096 May 15 19:10 pilot3
[2024-05-15 23:00:33] -rw------- 1 boinc boinc 275711762 May 15 22:59 HITS.38776146._005114.pool.root.1
[2024-05-15 23:00:33] -rw------- 1 boinc boinc        95 May 15 22:59 pilot_heartbeat.json
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc       531 May 15 22:59 boinc_task_state.xml
[2024-05-15 23:00:33] -rw------- 1 boinc boinc      1040 May 15 23:00 memory_monitor_summary.json
[2024-05-15 23:00:33] -rw------- 1 boinc boinc         0 May 15 23:00 agis_ddmendpoints.agis.ALL.json
[2024-05-15 23:00:33] -rw------- 1 boinc boinc    335408 May 15 23:00 log.38776146._005114.job.log.tgz.1
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc      8192 May 15 23:00 boinc_mmap_file
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc        28 May 15 23:00 wrapper_checkpoint.txt
[2024-05-15 23:00:33] -rw------- 1 boinc boinc      7723 May 15 23:00 heartbeat.json
[2024-05-15 23:00:33] -rw------- 1 boinc boinc      4223 May 15 23:00 pilotlog.txt
[2024-05-15 23:00:33] -rw------- 1 boinc boinc   1494797 May 15 23:00 log.38776146._005114.job.log.1
[2024-05-15 23:00:33] -rw------- 1 boinc boinc       357 May 15 23:00 output.list
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc       620 May 15 23:00 runtime_log
[2024-05-15 23:00:33] -rw------- 1 boinc boinc   1853440 May 15 23:00 result.tar.gz
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc     11429 May 15 23:00 runtime_log.err
[2024-05-15 23:00:33] -rw------- 1 boinc boinc       658 May 15 23:00 5SQKDmUSiQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmJSKKDmc1EAan.diag
[2024-05-15 23:00:33] -rw-r--r-- 1 boinc boinc     21340 May 15 23:00 stderr.txt
[2024-05-15 23:00:33] HITS file was successfully produced:
[2024-05-15 23:00:33] -rw------- 1 boinc boinc 275711762 May 15 22:59 shared/HITS.pool.root.1
[2024-05-15 23:00:33]  *** Contents of shared directory: ***
[2024-05-15 23:00:33] total 873424
[2024-05-15 23:00:33] -rw-r--r-- 2 boinc boinc     17537 May 15 19:09 start_atlas.sh
[2024-05-15 23:00:33] -rw-r--r-- 2 boinc boinc    479994 May 15 19:09 input.tar.gz
[2024-05-15 23:00:33] -rw-r--r-- 2 boinc boinc 616302690 May 15 19:09 ATLAS.root_0
[2024-05-15 23:00:33] -rw------- 1 boinc boinc 275711762 May 15 22:59 HITS.pool.root.1
[2024-05-15 23:00:33] -rw------- 1 boinc boinc   1853440 May 15 23:00 result.tar.gz
23:00:35 (3069517): run_atlas exited; CPU time 52146.827412
23:00:35 (3069517): called boinc_finish(0)

</stderr_txt>
]]>

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