Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:54:18 (3568241): wrapper (7.7.26015): starting
11:54:18 (3568241): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 11:54:18] Arguments: --nthreads 4
[2024-05-17 11:54:18] Threads: 4
[2024-05-17 11:54:18] Checking for CVMFS
[2024-05-17 11:54:18] No cvmfs_config command found, will try listing directly
[2024-05-17 11:54:18] CVMFS is ok
[2024-05-17 11:54:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 11:54:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 11:54:18] Further information can be found at the LHC@home message board.
[2024-05-17 11:54:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 11:54:18] Checking for apptainer binary...
[2024-05-17 11:54:18] which: no apptainer in ((null))
[2024-05-17 11:54:18] apptainer is not installed, using version from CVMFS
[2024-05-17 11:54:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 11:54:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-05-17 11:54:19] apptainer works
[2024-05-17 11:54:19] Set ATHENA_PROC_NUMBER=4
[2024-05-17 11:54:19] Set ATHENA_CORE_NUMBER=4
[2024-05-17 11:54:19] Starting ATLAS job with PandaID=6205828340
[2024-05-17 11:54:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 15:33:52]  *** The last 200 lines of the pilot log: ***
[2024-05-17 15:33:52] 2024-05-17 13:33:30,811 | INFO     | chi2: 0.054638034388192175
[2024-05-17 15:33:52] 2024-05-17 13:33:30,812 | INFO     | current chi2=0.054638034388192175 (change=96.49396708978041 %)
[2024-05-17 15:33:52] 2024-05-17 13:33:30,812 | INFO     | model: linear, x: [1715940605.0, 1715940666.0, 1715940727.0, 1715940788.0, 1715940849.0, 1715940910.0, 1715940971.0, 1715941032.0, 1715941093.0, 1715941154.0, 1715
[2024-05-17 15:33:52] 2024-05-17 13:33:30,812 | INFO     | sum of square deviations: 2480604650.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,812 | INFO     | sum of deviations: 7105334411.999998
[2024-05-17 15:33:52] 2024-05-17 13:33:30,813 | INFO     | mean x: 1715946674.5
[2024-05-17 15:33:52] 2024-05-17 13:33:30,813 | INFO     | mean y: 2350882.64
[2024-05-17 15:33:52] 2024-05-17 13:33:30,813 | INFO     | -- intersect: -4912730992.854271
[2024-05-17 15:33:52] 2024-05-17 13:33:30,813 | INFO     | intersect: -4912730992.854271
[2024-05-17 15:33:52] 2024-05-17 13:33:30,813 | INFO     | chi2: 0.0015787156979389727
[2024-05-17 15:33:52] 2024-05-17 13:33:30,813 | INFO     | current chi2=0.0015787156979389727 (change=97.11059207085944 %)
[2024-05-17 15:33:52] 2024-05-17 13:33:30,813 | INFO     | model: linear, x: [1715940910.0, 1715940971.0, 1715941032.0, 1715941093.0, 1715941154.0, 1715941215.0, 1715941276.0, 1715941337.0, 1715941398.0, 1715941459.0, 1715
[2024-05-17 15:33:52] 2024-05-17 13:33:30,813 | INFO     | sum of square deviations: 2299168690.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,814 | INFO     | sum of deviations: 5836700759.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,814 | INFO     | mean x: 1715946827.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,814 | INFO     | mean y: 2351944.7230769233
[2024-05-17 15:33:52] 2024-05-17 13:33:30,814 | INFO     | -- intersect: -4353773898.115598
[2024-05-17 15:33:52] 2024-05-17 13:33:30,814 | INFO     | intersect: -4353773898.115598
[2024-05-17 15:33:52] 2024-05-17 13:33:30,814 | INFO     | chi2: 0.000822185765460536
[2024-05-17 15:33:52] 2024-05-17 13:33:30,814 | INFO     | current chi2=0.000822185765460536 (change=47.920593522069446 %)
[2024-05-17 15:33:52] 2024-05-17 13:33:30,814 | INFO     | model: linear, x: [1715941215.0, 1715941276.0, 1715941337.0, 1715941398.0, 1715941459.0, 1715941520.0, 1715941581.0, 1715941642.0, 1715941703.0, 1715941764.0, 1715
[2024-05-17 15:33:52] 2024-05-17 13:33:30,815 | INFO     | sum of square deviations: 2126802667.5
[2024-05-17 15:33:52] 2024-05-17 13:33:30,815 | INFO     | sum of deviations: 4758434594.500001
[2024-05-17 15:33:52] 2024-05-17 13:33:30,815 | INFO     | mean x: 1715946979.5
[2024-05-17 15:33:52] 2024-05-17 13:33:30,815 | INFO     | mean y: 2352897.8368421053
[2024-05-17 15:33:52] 2024-05-17 13:33:30,815 | INFO     | -- intersect: -3836847416.4916067
[2024-05-17 15:33:52] 2024-05-17 13:33:30,815 | INFO     | intersect: -3836847416.4916067
[2024-05-17 15:33:52] 2024-05-17 13:33:30,815 | INFO     | chi2: 0.0003467900997147831
[2024-05-17 15:33:52] 2024-05-17 13:33:30,816 | INFO     | current chi2=0.0003467900997147831 (change=57.82095552085684 %)
[2024-05-17 15:33:52] 2024-05-17 13:33:30,816 | INFO     | model: linear, x: [1715941520.0, 1715941581.0, 1715941642.0, 1715941703.0, 1715941764.0, 1715941825.0, 1715941886.0, 1715941947.0, 1715942008.0, 1715942069.0, 1715
[2024-05-17 15:33:52] 2024-05-17 13:33:30,816 | INFO     | sum of square deviations: 1963274020.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,816 | INFO     | sum of deviations: 4044666732.000001
[2024-05-17 15:33:52] 2024-05-17 13:33:30,816 | INFO     | mean x: 1715947132.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,816 | INFO     | mean y: 2353562.5567567567
[2024-05-17 15:33:52] 2024-05-17 13:33:30,817 | INFO     | -- intersect: -3532779184.053527
[2024-05-17 15:33:52] 2024-05-17 13:33:30,817 | INFO     | intersect: -3532779184.053527
[2024-05-17 15:33:52] 2024-05-17 13:33:30,817 | INFO     | chi2: 0.00019562935544783884
[2024-05-17 15:33:52] 2024-05-17 13:33:30,817 | INFO     | current chi2=0.00019562935544783884 (change=43.58854084683102 %)
[2024-05-17 15:33:52] 2024-05-17 13:33:30,817 | INFO     | model: linear, x: [1715941825.0, 1715941886.0, 1715941947.0, 1715942008.0, 1715942069.0, 1715942130.0, 1715942191.0, 1715942252.0, 1715942313.0, 1715942374.0, 1715
[2024-05-17 15:33:52] 2024-05-17 13:33:30,817 | INFO     | sum of square deviations: 1808350185.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | sum of deviations: 3555472535.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | mean x: 1715947284.5
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | mean y: 2354043.577777778
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | -- intersect: -3371441304.3335457
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | intersect: -3371441304.3335457
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | chi2: 0.00015676275264174408
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | current chi2=0.00015676275264174408 (change=19.86746964284604 %)
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | left removable region: 70
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | model: linear, x: [1715943960.0, 1715944021.0, 1715944082.0, 1715944143.0, 1715944204.0, 1715944265.0, 1715944326.0, 1715944387.0, 1715944448.0, 1715944509.0, 1715
[2024-05-17 15:33:52] 2024-05-17 13:33:30,818 | INFO     | sum of square deviations: 832722590.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,819 | INFO     | sum of deviations: 1286957016.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,819 | INFO     | mean x: 1715948169.0
[2024-05-17 15:33:52] 2024-05-17 13:33:30,819 | INFO     | mean y: 2356313.2230215827
[2024-05-17 15:33:52] 2024-05-17 13:33:30,819 | INFO     | -- intersect: -2649609133.2612677
[2024-05-17 15:33:52] 2024-05-17 13:33:30,819 | INFO     | intersect: -2649609133.2612677
[2024-05-17 15:33:52] 2024-05-17 13:33:30,819 | INFO     | chi2: 7.554971260281895e-05
[2024-05-17 15:33:52] 2024-05-17 13:33:30,819 | INFO     | -- intersect: -2649609133.2612677
[2024-05-17 15:33:52] 2024-05-17 13:33:30,819 | INFO     | current memory leak: 1.55 B/s (using 139 data points, chi2=0.00)
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | ..............................
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | . Timing measurements:
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | . get job = 0 s
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | . initial setup = 1 s
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | . payload setup = 4 s
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | . stage-in = 0 s
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | . payload execution = 13114 s
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | . stage-out = 0 s
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | . log creation = 0 s
[2024-05-17 15:33:52] 2024-05-17 13:33:30,820 | INFO     | ..............................
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | 
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | job summary report
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | --------------------------------------------------
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | PanDA job id: 6205828340
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | task id: 38776146
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | errors: (none)
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | pilot state: finished 
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | transexitcode: 0
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | exeerrorcode: 0
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | exeerrordiag: 
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | exitcode: 0
[2024-05-17 15:33:52] 2024-05-17 13:33:31,202 | INFO     | exitmsg: OK
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | cpuconsumptiontime: 49638 s
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | nevents: 400
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | neventsw: 0
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | pid: 3579549
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | pgrp: 3579549
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | corecount: 4
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | event service: False
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | sizes: {0: 2392185, 4: 2392391, 11: 2392419, 13122: 2422453, 13124: 2431435, 13126: 2431491, 13130: 2431789}
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | --------------------------------------------------
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | 
[2024-05-17 15:33:52] 2024-05-17 13:33:31,203 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/1
[2024-05-17 15:33:52] 2024-05-17 13:33:31,220 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,220 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,220 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,220 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | job 6205828340 has completed (purged errors)
[2024-05-17 15:33:52] 2024-05-17 13:33:31,221 | INFO     | overall cleanup function is called
[2024-05-17 15:33:52] 2024-05-17 13:33:32,228 | INFO     | --- collectZombieJob: --- 10, [3579549]
[2024-05-17 15:33:52] 2024-05-17 13:33:32,228 | INFO     | zombie collector waiting for pid 3579549
[2024-05-17 15:33:52] 2024-05-17 13:33:32,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 15:33:52] 2024-05-17 13:33:33,233 | INFO     | collected zombie processes
[2024-05-17 15:33:52] 2024-05-17 13:33:33,233 | INFO     | will now attempt to kill all subprocesses of pid=3579549
[2024-05-17 15:33:52] 2024-05-17 13:33:33,387 | INFO     | process IDs to be killed: [3579549] (in reverse order)
[2024-05-17 15:33:52] 2024-05-17 13:33:33,497 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 15:33:52] 2024-05-17 13:33:33,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 15:33:52] 2024-05-17 13:33:33,504 | INFO     | did not find any defunct processes belonging to 3579549
[2024-05-17 15:33:52] 2024-05-17 13:33:33,510 | INFO     | did not find any defunct processes belonging to 3579549
[2024-05-17 15:33:52] 2024-05-17 13:33:33,511 | INFO     | ready for new job
[2024-05-17 15:33:52] 2024-05-17 13:33:33,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 15:33:52] 2024-05-17 13:33:33,513 | INFO     | *************************************
[2024-05-17 15:33:52] 2024-05-17 13:33:33,513 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 15:33:52] 2024-05-17 13:33:33,513 | INFO     | *************************************
[2024-05-17 15:33:52] 2024-05-17 13:33:33,513 | INFO     | 
[2024-05-17 15:33:52] 2024-05-17 13:33:33,516 | INFO     | architecture information:
[2024-05-17 15:33:52] 2024-05-17 13:33:33,516 | INFO     | executing command: cat /etc/os-release
[2024-05-17 15:33:52] 2024-05-17 13:33:33,530 | INFO     | cat /etc/os-release:
[2024-05-17 15:33:52] NAME="CentOS Linux"
[2024-05-17 15:33:52] VERSION="7 (Core)"
[2024-05-17 15:33:52] ID="centos"
[2024-05-17 15:33:52] ID_LIKE="rhel fedora"
[2024-05-17 15:33:52] VERSION_ID="7"
[2024-05-17 15:33:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 15:33:52] ANSI_COLOR="0;31"
[2024-05-17 15:33:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 15:33:52] HOME_URL="https://www.centos.org/"
[2024-05-17 15:33:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 15:33:52] 
[2024-05-17 15:33:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 15:33:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 15:33:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 15:33:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 15:33:52] 
[2024-05-17 15:33:52] 2024-05-17 13:33:33,531 | INFO     | *************************************
[2024-05-17 15:33:52] 2024-05-17 13:33:34,034 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/1
[2024-05-17 15:33:52] 2024-05-17 13:33:34,051 | INFO     | sufficient remaining disk space (574331289600 B)
[2024-05-17 15:33:52] 2024-05-17 13:33:34,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 15:33:52] 2024-05-17 13:33:34,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 15:33:52] 2024-05-17 13:33:34,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 15:33:52] 2024-05-17 13:33:34,053 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 15:33:52] 2024-05-17 13:33:34,053 | INFO     | aborting loop
[2024-05-17 15:33:52] 2024-05-17 13:33:34,053 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 15:33:52] 2024-05-17 13:33:34,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 15:33:52] 2024-05-17 13:33:34,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 15:33:52] 2024-05-17 13:33:34,233 | INFO     | all data control threads have been joined
[2024-05-17 15:33:52] 2024-05-17 13:33:34,283 | INFO     | all job control threads have been joined
[2024-05-17 15:33:52] 2024-05-17 13:33:35,057 | INFO     | [job] retrieve thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:35,059 | INFO     | [job] job monitor thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:35,073 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:35,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 15:33:52] 2024-05-17 13:33:35,193 | INFO     | all payload control threads have been joined
[2024-05-17 15:33:52] 2024-05-17 13:33:35,238 | INFO     | [data] control thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:35,288 | INFO     | [job] control thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:35,826 | INFO     | [payload] validate_post thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:35,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 15:33:52] 2024-05-17 13:33:36,055 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:36,127 | INFO     | [payload] failed_post thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:36,153 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:36,197 | INFO     | [payload] control thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:36,288 | INFO     | [job] validate thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:36,535 | INFO     | [data] copytool_in thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:36,893 | INFO     | [job] queue monitor thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:37,128 | INFO     | [data] copytool_out thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:37,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 15:33:52] 2024-05-17 13:33:41,173 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:44,616 | INFO     | job.realtimelogging is not enabled
[2024-05-17 15:33:52] 2024-05-17 13:33:45,621 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 15:33:52] 2024-05-17 13:33:46,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47429559366720)>', '<ExcThread(monitor, started 47430001239808)>']
[2024-05-17 15:33:52] 2024-05-17 13:33:47,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 15:33:52] 2024-05-17 13:33:47,112 | INFO     | [monitor] control thread has ended
[2024-05-17 15:33:52] 2024-05-17 13:33:51,761 | INFO     | all workflow threads have been joined
[2024-05-17 15:33:52] 2024-05-17 13:33:51,761 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 15:33:52] 2024-05-17 13:33:51,762 | INFO     | traces error code: 0
[2024-05-17 15:33:52] 2024-05-17 13:33:51,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 15:33:52] 2024-05-17 13:33:51,844 [wrapper] ==== pilot stdout END ====
[2024-05-17 15:33:52] 2024-05-17 13:33:51,848 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 15:33:52] 2024-05-17 13:33:51,851 [wrapper] pilotpid: 3572534
[2024-05-17 15:33:52] 2024-05-17 13:33:51,853 [wrapper] Pilot exit status: 0
[2024-05-17 15:33:52] 2024-05-17 13:33:51,860 [wrapper] pandaids: 6205828340
[2024-05-17 15:33:52] 2024-05-17 13:33:51,922 [wrapper] cleanup: SIGTERM to supervisor_pilot 4034080 3572535
[2024-05-17 15:33:52] 2024-05-17 13:33:51,924 [wrapper] Test setup, not cleaning
[2024-05-17 15:33:52] 2024-05-17 13:33:51,926 [wrapper] ==== wrapper stdout END ====
[2024-05-17 15:33:52] 2024-05-17 13:33:51,928 [wrapper] ==== wrapper stderr END ====
[2024-05-17 15:33:52] 2024-05-17 13:33:51,933 [wrapper] apfmon messages muted
[2024-05-17 15:33:52]  *** Error codes and diagnostics ***
[2024-05-17 15:33:52]     "exeErrorCode": 0,
[2024-05-17 15:33:52]     "exeErrorDiag": "",
[2024-05-17 15:33:52]     "pilotErrorCode": 0,
[2024-05-17 15:33:52]     "pilotErrorDiag": "",
[2024-05-17 15:33:52]  *** Listing of results directory ***
[2024-05-17 15:33:52] total 873436
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc    467845 May 13 12:35 pilot3.tar.gz
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc      5633 May 13 12:51 queuedata.json
[2024-05-17 15:33:52] -rwx------ 1 boinc boinc     32251 May 13 12:51 runpilot2-wrapper.sh
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc       100 May 17 11:54 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 15:33:52] -rwxr-xr-x 1 boinc boinc      7986 May 17 11:54 run_atlas
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc       105 May 17 11:54 job.xml
[2024-05-17 15:33:52] -rw-r--r-- 2 boinc boinc 614122399 May 17 11:54 EVNT.38776140._000205.pool.root.1
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc      6663 May 17 11:54 init_data.xml
[2024-05-17 15:33:52] -rw-r--r-- 2 boinc boinc     17537 May 17 11:54 start_atlas.sh
[2024-05-17 15:33:52] drwxrwx--x 2 boinc boinc      4096 May 17 11:54 shared
[2024-05-17 15:33:52] -rw-r--r-- 2 boinc boinc    479992 May 17 11:54 input.tar.gz
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc         0 May 17 11:54 boinc_lockfile
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc      2613 May 17 11:54 pandaJob.out
[2024-05-17 15:33:52] -rw------- 1 boinc boinc       424 May 17 11:54 setup.sh.local
[2024-05-17 15:33:52] -rw------- 1 boinc boinc   1019400 May 17 11:54 agis_schedconf.cvmfs.json
[2024-05-17 15:33:52] -rw------- 1 boinc boinc   1324701 May 17 11:54 cric_ddmendpoints.json
[2024-05-17 15:33:52] drwx------ 4 boinc boinc      4096 May 17 11:54 pilot3
[2024-05-17 15:33:52] -rw------- 1 boinc boinc 273112694 May 17 15:32 HITS.38776146._005097.pool.root.1
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc       532 May 17 15:32 boinc_task_state.xml
[2024-05-17 15:33:52] -rw------- 1 boinc boinc        95 May 17 15:33 pilot_heartbeat.json
[2024-05-17 15:33:52] -rw------- 1 boinc boinc      1050 May 17 15:33 memory_monitor_summary.json
[2024-05-17 15:33:52] -rw------- 1 boinc boinc         0 May 17 15:33 agis_ddmendpoints.agis.ALL.json
[2024-05-17 15:33:52] -rw------- 1 boinc boinc    341502 May 17 15:33 log.38776146._005097.job.log.tgz.1
[2024-05-17 15:33:52] -rw------- 1 boinc boinc      7768 May 17 15:33 heartbeat.json
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc      8192 May 17 15:33 boinc_mmap_file
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc        28 May 17 15:33 wrapper_checkpoint.txt
[2024-05-17 15:33:52] -rw------- 1 boinc boinc      4416 May 17 15:33 pilotlog.txt
[2024-05-17 15:33:52] -rw------- 1 boinc boinc   1471536 May 17 15:33 log.38776146._005097.job.log.1
[2024-05-17 15:33:52] -rw------- 1 boinc boinc       357 May 17 15:33 output.list
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc       620 May 17 15:33 runtime_log
[2024-05-17 15:33:52] -rw------- 1 boinc boinc   1832960 May 17 15:33 result.tar.gz
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc     11410 May 17 15:33 runtime_log.err
[2024-05-17 15:33:52] -rw------- 1 boinc boinc       657 May 17 15:33 h2FKDmUSiQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmCSKKDmRlkIgm.diag
[2024-05-17 15:33:52] -rw-r--r-- 1 boinc boinc     21407 May 17 15:33 stderr.txt
[2024-05-17 15:33:52] HITS file was successfully produced:
[2024-05-17 15:33:52] -rw------- 1 boinc boinc 273112694 May 17 15:32 shared/HITS.pool.root.1
[2024-05-17 15:33:52]  *** Contents of shared directory: ***
[2024-05-17 15:33:52] total 868736
[2024-05-17 15:33:52] -rw-r--r-- 2 boinc boinc 614122399 May 17 11:54 ATLAS.root_0
[2024-05-17 15:33:52] -rw-r--r-- 2 boinc boinc     17537 May 17 11:54 start_atlas.sh
[2024-05-17 15:33:52] -rw-r--r-- 2 boinc boinc    479992 May 17 11:54 input.tar.gz
[2024-05-17 15:33:52] -rw------- 1 boinc boinc 273112694 May 17 15:32 HITS.pool.root.1
[2024-05-17 15:33:52] -rw------- 1 boinc boinc   1832960 May 17 15:33 result.tar.gz
15:33:54 (3568241): run_atlas exited; CPU time 49370.604747
15:33:54 (3568241): called boinc_finish(0)

</stderr_txt>
]]>

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