Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:17:01 (3026526): wrapper (7.7.26015): starting
11:17:01 (3026526): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 11:17:01] Arguments: --nthreads 4
[2024-05-16 11:17:01] Threads: 4
[2024-05-16 11:17:01] Checking for CVMFS
[2024-05-16 11:17:01] No cvmfs_config command found, will try listing directly
[2024-05-16 11:17:01] CVMFS is ok
[2024-05-16 11:17:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 11:17:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 11:17:01] Further information can be found at the LHC@home message board.
[2024-05-16 11:17:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 11:17:01] Checking for apptainer binary...
[2024-05-16 11:17:01] which: no apptainer in ((null))
[2024-05-16 11:17:01] apptainer is not installed, using version from CVMFS
[2024-05-16 11:17:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 11:17:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-16 11:17:02] apptainer works
[2024-05-16 11:17:02] Set ATHENA_PROC_NUMBER=4
[2024-05-16 11:17:02] Set ATHENA_CORE_NUMBER=4
[2024-05-16 11:17:02] Starting ATLAS job with PandaID=6205828066
[2024-05-16 11:17:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 16:08:26]  *** The last 200 lines of the pilot log: ***
[2024-05-16 16:08:26] 2024-05-16 14:08:06,515 | INFO     | model: linear, x: [1715851072.0, 1715851133.0, 1715851194.0, 1715851255.0, 1715851316.0, 1715851377.0, 1715851438.0, 1715851499.0, 1715851560.0, 1715851621.0, 1715
[2024-05-16 16:08:26] 2024-05-16 14:08:06,515 | INFO     | sum of square deviations: 7253894147.5
[2024-05-16 16:08:26] 2024-05-16 14:08:06,518 | INFO     | sum of deviations: 109859785977.99997
[2024-05-16 16:08:26] 2024-05-16 14:08:06,518 | INFO     | mean x: 1715859764.5
[2024-05-16 16:08:26] 2024-05-16 14:08:06,518 | INFO     | mean y: 2288357.013986014
[2024-05-16 16:08:26] 2024-05-16 14:08:06,518 | INFO     | -- intersect: -25984303487.753685
[2024-05-16 16:08:26] 2024-05-16 14:08:06,518 | INFO     | intersect: -25984303487.753685
[2024-05-16 16:08:26] 2024-05-16 14:08:06,519 | INFO     | chi2: 4.569572207313665
[2024-05-16 16:08:26] 2024-05-16 14:08:06,519 | INFO     | model: linear, x: [1715851072.0, 1715851133.0, 1715851194.0, 1715851255.0, 1715851316.0, 1715851377.0, 1715851438.0, 1715851499.0, 1715851560.0, 1715851621.0, 1715
[2024-05-16 16:08:26] 2024-05-16 14:08:06,519 | INFO     | sum of square deviations: 6880054580.0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,521 | INFO     | sum of deviations: 126047786698.99998
[2024-05-16 16:08:26] 2024-05-16 14:08:06,522 | INFO     | mean x: 1715859612.0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,522 | INFO     | mean y: 2294854.9928825623
[2024-05-16 16:08:26] 2024-05-16 14:08:06,522 | INFO     | -- intersect: -31433546803.519787
[2024-05-16 16:08:26] 2024-05-16 14:08:06,522 | INFO     | intersect: -31433546803.519787
[2024-05-16 16:08:26] 2024-05-16 14:08:06,522 | INFO     | chi2: 3.76412952405528
[2024-05-16 16:08:26] 2024-05-16 14:08:06,522 | INFO     | current chi2=3.76412952405528 (change=17.626216344043375 %)
[2024-05-16 16:08:26] 2024-05-16 14:08:06,522 | INFO     | right removable region: 280
[2024-05-16 16:08:26] 2024-05-16 14:08:06,523 | INFO     | model: linear, x: [1715851377.0, 1715851438.0, 1715851499.0, 1715851560.0, 1715851621.0, 1715851682.0, 1715851743.0, 1715851804.0, 1715851865.0, 1715851926.0, 1715
[2024-05-16 16:08:26] 2024-05-16 14:08:06,523 | INFO     | sum of square deviations: 6880054580.0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,525 | INFO     | sum of deviations: 45943168273.0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,525 | INFO     | mean x: 1715859917.0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,525 | INFO     | mean y: 2314372.1138790036
[2024-05-16 16:08:26] 2024-05-16 14:08:06,526 | INFO     | -- intersect: -11455740209.13725
[2024-05-16 16:08:26] 2024-05-16 14:08:06,526 | INFO     | intersect: -11455740209.13725
[2024-05-16 16:08:26] 2024-05-16 14:08:06,526 | INFO     | chi2: 2.2692143646541254
[2024-05-16 16:08:26] 2024-05-16 14:08:06,526 | INFO     | current chi2=2.2692143646541254 (change=50.34077017051584 %)
[2024-05-16 16:08:26] 2024-05-16 14:08:06,527 | INFO     | model: linear, x: [1715851682.0, 1715851743.0, 1715851804.0, 1715851865.0, 1715851926.0, 1715851987.0, 1715852048.0, 1715852109.0, 1715852170.0, 1715852231.0, 1715
[2024-05-16 16:08:26] 2024-05-16 14:08:06,527 | INFO     | sum of square deviations: 6519285025.0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,528 | INFO     | sum of deviations: -5549164754.000002
[2024-05-16 16:08:26] 2024-05-16 14:08:06,528 | INFO     | mean x: 1715860069.5
[2024-05-16 16:08:26] 2024-05-16 14:08:06,528 | INFO     | mean y: 2336139.065217391
[2024-05-16 16:08:26] 2024-05-16 14:08:06,528 | INFO     | -- intersect: 1462862896.823503
[2024-05-16 16:08:26] 2024-05-16 14:08:06,528 | INFO     | intersect: 1462862896.823503
[2024-05-16 16:08:26] 2024-05-16 14:08:06,529 | INFO     | chi2: 0.9151316969221781
[2024-05-16 16:08:26] 2024-05-16 14:08:06,529 | INFO     | current chi2=0.9151316969221781 (change=59.67187097100618 %)
[2024-05-16 16:08:26] 2024-05-16 14:08:06,529 | INFO     | model: linear, x: [1715851987.0, 1715852048.0, 1715852109.0, 1715852170.0, 1715852231.0, 1715852292.0, 1715852353.0, 1715852414.0, 1715852475.0, 1715852536.0, 1715
[2024-05-16 16:08:26] 2024-05-16 14:08:06,529 | INFO     | sum of square deviations: 6171352920.0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,530 | INFO     | sum of deviations: -15636461962.000002
[2024-05-16 16:08:26] 2024-05-16 14:08:06,530 | INFO     | mean x: 1715860222.0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,530 | INFO     | mean y: 2340531.2693726937
[2024-05-16 16:08:26] 2024-05-16 14:08:06,530 | INFO     | -- intersect: 4349844788.635985
[2024-05-16 16:08:26] 2024-05-16 14:08:06,530 | INFO     | intersect: 4349844788.635985
[2024-05-16 16:08:26] 2024-05-16 14:08:06,531 | INFO     | chi2: 0.8374160790906633
[2024-05-16 16:08:26] 2024-05-16 14:08:06,531 | INFO     | current chi2=0.8374160790906633 (change=8.492287841508748 %)
[2024-05-16 16:08:26] 2024-05-16 14:08:06,531 | INFO     | left removable region: 30
[2024-05-16 16:08:26] 2024-05-16 14:08:06,531 | INFO     | model: linear, x: [1715852902.0, 1715852963.0, 1715853024.0, 1715853085.0, 1715853146.0, 1715853207.0, 1715853268.0, 1715853329.0, 1715853390.0, 1715853451.0, 1715
[2024-05-16 16:08:26] 2024-05-16 14:08:06,531 | INFO     | sum of square deviations: 4844974562.5
[2024-05-16 16:08:26] 2024-05-16 14:08:06,532 | INFO     | sum of deviations: 86919967.50000021
[2024-05-16 16:08:26] 2024-05-16 14:08:06,532 | INFO     | mean x: 1715860496.5
[2024-05-16 16:08:26] 2024-05-16 14:08:06,532 | INFO     | mean y: 2349229.796
[2024-05-16 16:08:26] 2024-05-16 14:08:06,532 | INFO     | -- intersect: -28433705.5252036
[2024-05-16 16:08:26] 2024-05-16 14:08:06,532 | INFO     | intersect: -28433705.5252036
[2024-05-16 16:08:26] 2024-05-16 14:08:06,532 | INFO     | chi2: 0.0018470403585452444
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | -- intersect: -28433705.5252036
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | current memory leak: 0.02 B/s (using 250 data points, chi2=0.00)
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | ..............................
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | . Timing measurements:
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | . get job = 0 s
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | . initial setup = 1 s
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | . payload setup = 8 s
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | . stage-in = 0 s
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | . payload execution = 17408 s
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | . stage-out = 0 s
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | . log creation = 0 s
[2024-05-16 16:08:26] 2024-05-16 14:08:06,533 | INFO     | ..............................
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | 
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | job summary report
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | --------------------------------------------------
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | PanDA job id: 6205828066
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | task id: 38776146
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | errors: (none)
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | pilot state: finished 
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | transexitcode: 0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | exeerrorcode: 0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | exeerrordiag: 
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | exitcode: 0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | exitmsg: OK
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | cpuconsumptiontime: 66675 s
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | nevents: 400
[2024-05-16 16:08:26] 2024-05-16 14:08:06,586 | INFO     | neventsw: 0
[2024-05-16 16:08:26] 2024-05-16 14:08:06,587 | INFO     | pid: 3040267
[2024-05-16 16:08:26] 2024-05-16 14:08:06,587 | INFO     | pgrp: 3040267
[2024-05-16 16:08:26] 2024-05-16 14:08:06,587 | INFO     | corecount: 4
[2024-05-16 16:08:26] 2024-05-16 14:08:06,587 | INFO     | event service: False
[2024-05-16 16:08:26] 2024-05-16 14:08:06,587 | INFO     | sizes: {0: 2392185, 8: 2392391, 11: 2392419, 17419: 2424277, 17422: 2433259, 17425: 2433315, 17429: 2433613}
[2024-05-16 16:08:26] 2024-05-16 14:08:06,587 | INFO     | --------------------------------------------------
[2024-05-16 16:08:26] 2024-05-16 14:08:06,587 | INFO     | 
[2024-05-16 16:08:26] 2024-05-16 14:08:06,587 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/1
[2024-05-16 16:08:26] 2024-05-16 14:08:06,655 | WARNING  | process 3040267 is no longer using CPU - aborting
[2024-05-16 16:08:26] 2024-05-16 14:08:06,655 | INFO     | aborting job monitoring since job object (job id=6205828066) has expired
[2024-05-16 16:08:26] 2024-05-16 14:08:06,673 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,673 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,673 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,675 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 16:08:26] 2024-05-16 14:08:06,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,675 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 16:08:26] 2024-05-16 14:08:06,675 | INFO     | job 6205828066 has completed (purged errors)
[2024-05-16 16:08:26] 2024-05-16 14:08:06,675 | INFO     | overall cleanup function is called
[2024-05-16 16:08:26] 2024-05-16 14:08:07,682 | INFO     | --- collectZombieJob: --- 10, [3040267]
[2024-05-16 16:08:26] 2024-05-16 14:08:07,683 | INFO     | zombie collector waiting for pid 3040267
[2024-05-16 16:08:26] 2024-05-16 14:08:07,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 16:08:26] 2024-05-16 14:08:08,687 | INFO     | collected zombie processes
[2024-05-16 16:08:26] 2024-05-16 14:08:08,688 | INFO     | will now attempt to kill all subprocesses of pid=3040267
[2024-05-16 16:08:26] 2024-05-16 14:08:08,841 | INFO     | process IDs to be killed: [3040267] (in reverse order)
[2024-05-16 16:08:26] 2024-05-16 14:08:08,938 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 16:08:26] 2024-05-16 14:08:08,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 16:08:26] 2024-05-16 14:08:08,945 | INFO     | did not find any defunct processes belonging to 3040267
[2024-05-16 16:08:26] 2024-05-16 14:08:08,951 | INFO     | did not find any defunct processes belonging to 3040267
[2024-05-16 16:08:26] 2024-05-16 14:08:08,951 | INFO     | ready for new job
[2024-05-16 16:08:26] 2024-05-16 14:08:08,952 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 16:08:26] 2024-05-16 14:08:08,953 | INFO     | *************************************
[2024-05-16 16:08:26] 2024-05-16 14:08:08,953 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 16:08:26] 2024-05-16 14:08:08,953 | INFO     | *************************************
[2024-05-16 16:08:26] 2024-05-16 14:08:08,953 | INFO     | 
[2024-05-16 16:08:26] 2024-05-16 14:08:08,956 | INFO     | architecture information:
[2024-05-16 16:08:26] 2024-05-16 14:08:08,956 | INFO     | executing command: cat /etc/os-release
[2024-05-16 16:08:26] 2024-05-16 14:08:08,972 | INFO     | cat /etc/os-release:
[2024-05-16 16:08:26] NAME="CentOS Linux"
[2024-05-16 16:08:26] VERSION="7 (Core)"
[2024-05-16 16:08:26] ID="centos"
[2024-05-16 16:08:26] ID_LIKE="rhel fedora"
[2024-05-16 16:08:26] VERSION_ID="7"
[2024-05-16 16:08:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 16:08:26] ANSI_COLOR="0;31"
[2024-05-16 16:08:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 16:08:26] HOME_URL="https://www.centos.org/"
[2024-05-16 16:08:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 16:08:26] 
[2024-05-16 16:08:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 16:08:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 16:08:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 16:08:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 16:08:26] 
[2024-05-16 16:08:26] 2024-05-16 14:08:08,972 | INFO     | *************************************
[2024-05-16 16:08:26] 2024-05-16 14:08:09,475 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/1
[2024-05-16 16:08:26] 2024-05-16 14:08:09,498 | INFO     | sufficient remaining disk space (565298855936 B)
[2024-05-16 16:08:26] 2024-05-16 14:08:09,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 16:08:26] 2024-05-16 14:08:09,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 16:08:26] 2024-05-16 14:08:09,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 16:08:26] 2024-05-16 14:08:09,498 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 16:08:26] 2024-05-16 14:08:09,499 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 16:08:26] 2024-05-16 14:08:09,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 16:08:26] 2024-05-16 14:08:09,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 16:08:26] 2024-05-16 14:08:09,696 | INFO     | all job control threads have been joined
[2024-05-16 16:08:26] 2024-05-16 14:08:10,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 16:08:26] 2024-05-16 14:08:10,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 16:08:26] 2024-05-16 14:08:10,161 | INFO     | aborting loop
[2024-05-16 16:08:26] 2024-05-16 14:08:10,302 | INFO     | all data control threads have been joined
[2024-05-16 16:08:26] 2024-05-16 14:08:10,503 | INFO     | [job] retrieve thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:10,557 | INFO     | all payload control threads have been joined
[2024-05-16 16:08:26] 2024-05-16 14:08:10,701 | INFO     | [job] control thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,164 | INFO     | [job] job monitor thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,174 | INFO     | [payload] validate_post thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,253 | INFO     | [payload] failed_post thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,308 | INFO     | [data] control thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,562 | INFO     | [payload] control thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,595 | INFO     | [job] validate thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 16:08:26] 2024-05-16 14:08:11,625 | INFO     | [data] copytool_in thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,638 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,783 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:11,801 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:12,112 | INFO     | [data] copytool_out thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:12,600 | INFO     | [job] queue monitor thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:13,504 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:19,775 | INFO     | job.realtimelogging is not enabled
[2024-05-16 16:08:26] 2024-05-16 14:08:20,781 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 16:08:26] 2024-05-16 14:08:20,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47742191473728)>', '<ExcThread(monitor, started 47742366926592)>']
[2024-05-16 16:08:26] 2024-05-16 14:08:21,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 16:08:26] 2024-05-16 14:08:21,560 | INFO     | [monitor] control thread has ended
[2024-05-16 16:08:26] 2024-05-16 14:08:25,830 | INFO     | all workflow threads have been joined
[2024-05-16 16:08:26] 2024-05-16 14:08:25,830 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 16:08:26] 2024-05-16 14:08:25,830 | INFO     | traces error code: 0
[2024-05-16 16:08:26] 2024-05-16 14:08:25,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 16:08:26] 2024-05-16 14:08:25,923 [wrapper] ==== pilot stdout END ====
[2024-05-16 16:08:26] 2024-05-16 14:08:25,925 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 16:08:26] 2024-05-16 14:08:25,927 [wrapper] pilotpid: 3030935
[2024-05-16 16:08:26] 2024-05-16 14:08:25,929 [wrapper] Pilot exit status: 0
[2024-05-16 16:08:26] 2024-05-16 14:08:25,936 [wrapper] pandaids: 6205828066
[2024-05-16 16:08:26] 2024-05-16 14:08:26,004 [wrapper] cleanup: SIGTERM to supervisor_pilot 3756529 3030936
[2024-05-16 16:08:26] 2024-05-16 14:08:26,006 [wrapper] Test setup, not cleaning
[2024-05-16 16:08:26] 2024-05-16 14:08:26,008 [wrapper] ==== wrapper stdout END ====
[2024-05-16 16:08:26] 2024-05-16 14:08:26,010 [wrapper] ==== wrapper stderr END ====
[2024-05-16 16:08:26] 2024-05-16 14:08:26,014 [wrapper] apfmon messages muted
[2024-05-16 16:08:26]  *** Error codes and diagnostics ***
[2024-05-16 16:08:26]     "exeErrorCode": 0,
[2024-05-16 16:08:26]     "exeErrorDiag": "",
[2024-05-16 16:08:26]     "pilotErrorCode": 0,
[2024-05-16 16:08:26]     "pilotErrorDiag": "",
[2024-05-16 16:08:26]  *** Listing of results directory ***
[2024-05-16 16:08:26] total 878628
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc    467845 May 13 12:35 pilot3.tar.gz
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc      5633 May 13 12:45 queuedata.json
[2024-05-16 16:08:26] -rwx------ 1 boinc boinc     32251 May 13 12:46 runpilot2-wrapper.sh
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc       100 May 16 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 16:08:26] -rwxr-xr-x 1 boinc boinc      7986 May 16 11:16 run_atlas
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc       105 May 16 11:16 job.xml
[2024-05-16 16:08:26] -rw-r--r-- 2 boinc boinc 616121555 May 16 11:17 EVNT.38776140._000200.pool.root.1
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc      6662 May 16 11:17 init_data.xml
[2024-05-16 16:08:26] drwxrwx--x 2 boinc boinc      4096 May 16 11:17 shared
[2024-05-16 16:08:26] -rw-r--r-- 2 boinc boinc    479994 May 16 11:17 input.tar.gz
[2024-05-16 16:08:26] -rw-r--r-- 2 boinc boinc     17537 May 16 11:17 start_atlas.sh
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc         0 May 16 11:17 boinc_lockfile
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc      2613 May 16 11:17 pandaJob.out
[2024-05-16 16:08:26] -rw------- 1 boinc boinc       424 May 16 11:17 setup.sh.local
[2024-05-16 16:08:26] -rw------- 1 boinc boinc   1010326 May 16 11:17 agis_schedconf.cvmfs.json
[2024-05-16 16:08:26] -rw------- 1 boinc boinc   1324701 May 16 11:17 cric_ddmendpoints.json
[2024-05-16 16:08:26] drwx------ 4 boinc boinc      4096 May 16 11:17 pilot3
[2024-05-16 16:08:26] -rw------- 1 boinc boinc        95 May 16 16:07 pilot_heartbeat.json
[2024-05-16 16:08:26] -rw------- 1 boinc boinc 275517891 May 16 16:07 HITS.38776146._005007.pool.root.1
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc       532 May 16 16:07 boinc_task_state.xml
[2024-05-16 16:08:26] -rw------- 1 boinc boinc      1048 May 16 16:07 memory_monitor_summary.json
[2024-05-16 16:08:26] -rw------- 1 boinc boinc         0 May 16 16:07 agis_ddmendpoints.agis.ALL.json
[2024-05-16 16:08:26] -rw------- 1 boinc boinc    395638 May 16 16:07 log.38776146._005007.job.log.tgz.1
[2024-05-16 16:08:26] -rw------- 1 boinc boinc      7764 May 16 16:08 heartbeat.json
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc        28 May 16 16:08 wrapper_checkpoint.txt
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc      8192 May 16 16:08 boinc_mmap_file
[2024-05-16 16:08:26] -rw------- 1 boinc boinc      4416 May 16 16:08 pilotlog.txt
[2024-05-16 16:08:26] -rw------- 1 boinc boinc   1879882 May 16 16:08 log.38776146._005007.job.log.1
[2024-05-16 16:08:26] -rw------- 1 boinc boinc       357 May 16 16:08 output.list
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc       620 May 16 16:08 runtime_log
[2024-05-16 16:08:26] -rw------- 1 boinc boinc   2293760 May 16 16:08 result.tar.gz
[2024-05-16 16:08:26] -rw------- 1 boinc boinc       659 May 16 16:08 xrXKDmfNiQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDm6QKKDminQlKm.diag
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc     11410 May 16 16:08 runtime_log.err
[2024-05-16 16:08:26] -rw-r--r-- 1 boinc boinc     21377 May 16 16:08 stderr.txt
[2024-05-16 16:08:26] HITS file was successfully produced:
[2024-05-16 16:08:26] -rw------- 1 boinc boinc 275517891 May 16 16:07 shared/HITS.pool.root.1
[2024-05-16 16:08:26]  *** Contents of shared directory: ***
[2024-05-16 16:08:26] total 873488
[2024-05-16 16:08:26] -rw-r--r-- 2 boinc boinc 616121555 May 16 11:17 ATLAS.root_0
[2024-05-16 16:08:26] -rw-r--r-- 2 boinc boinc    479994 May 16 11:17 input.tar.gz
[2024-05-16 16:08:26] -rw-r--r-- 2 boinc boinc     17537 May 16 11:17 start_atlas.sh
[2024-05-16 16:08:26] -rw------- 1 boinc boinc 275517891 May 16 16:07 HITS.pool.root.1
[2024-05-16 16:08:26] -rw------- 1 boinc boinc   2293760 May 16 16:08 result.tar.gz
16:08:28 (3026526): run_atlas exited; CPU time 66308.371445
16:08:28 (3026526): called boinc_finish(0)

</stderr_txt>
]]>

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