Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:44:34 (460311): wrapper (7.7.26015): starting
11:44:34 (460311): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 11:44:34] Arguments: --nthreads 4
[2024-05-16 11:44:34] Threads: 4
[2024-05-16 11:44:34] Checking for CVMFS
[2024-05-16 11:44:34] No cvmfs_config command found, will try listing directly
[2024-05-16 11:44:34] CVMFS is ok
[2024-05-16 11:44:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 11:44:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 11:44:34] Further information can be found at the LHC@home message board.
[2024-05-16 11:44:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 11:44:34] Checking for apptainer binary...
[2024-05-16 11:44:34] which: no apptainer in ((null))
[2024-05-16 11:44:34] apptainer is not installed, using version from CVMFS
[2024-05-16 11:44:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 11:44:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-05-16 11:44:35] apptainer works
[2024-05-16 11:44:35] Set ATHENA_PROC_NUMBER=4
[2024-05-16 11:44:35] Set ATHENA_CORE_NUMBER=4
[2024-05-16 11:44:35] Starting ATLAS job with PandaID=6205827736
[2024-05-16 11:44:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 17:23:08]  *** The last 200 lines of the pilot log: ***
[2024-05-16 17:23:08] 2024-05-16 15:22:48,517 | INFO     | model: linear, x: [1715853927.0, 1715853988.0, 1715854049.0, 1715854110.0, 1715854171.0, 1715854232.0, 1715854293.0, 1715854354.0, 1715854415.0, 1715854476.0, 1715
[2024-05-16 17:23:08] 2024-05-16 15:22:48,517 | INFO     | sum of square deviations: 9417545878.0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,519 | INFO     | sum of deviations: 13056356765.499998
[2024-05-16 17:23:08] 2024-05-16 15:22:48,519 | INFO     | mean x: 1715863412.5
[2024-05-16 17:23:08] 2024-05-16 15:22:48,519 | INFO     | mean y: 2347658.028846154
[2024-05-16 17:23:08] 2024-05-16 15:22:48,519 | INFO     | -- intersect: -2376501902.640986
[2024-05-16 17:23:08] 2024-05-16 15:22:48,519 | INFO     | intersect: -2376501902.640986
[2024-05-16 17:23:08] 2024-05-16 15:22:48,519 | INFO     | chi2: 0.005451487455231795
[2024-05-16 17:23:08] 2024-05-16 15:22:48,519 | INFO     | current chi2=0.005451487455231795 (change=85.51281078322415 %)
[2024-05-16 17:23:08] 2024-05-16 15:22:48,520 | INFO     | model: linear, x: [1715854232.0, 1715854293.0, 1715854354.0, 1715854415.0, 1715854476.0, 1715854537.0, 1715854598.0, 1715854659.0, 1715854720.0, 1715854781.0, 1715
[2024-05-16 17:23:08] 2024-05-16 15:22:48,520 | INFO     | sum of square deviations: 8971993338.0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,521 | INFO     | sum of deviations: 13321666292.000002
[2024-05-16 17:23:08] 2024-05-16 15:22:48,521 | INFO     | mean x: 1715863565.0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,521 | INFO     | mean y: 2347575.247557003
[2024-05-16 17:23:08] 2024-05-16 15:22:48,522 | INFO     | -- intersect: -2545376320.0342135
[2024-05-16 17:23:08] 2024-05-16 15:22:48,522 | INFO     | intersect: -2545376320.0342135
[2024-05-16 17:23:08] 2024-05-16 15:22:48,522 | INFO     | chi2: 0.0013195926105111155
[2024-05-16 17:23:08] 2024-05-16 15:22:48,522 | INFO     | current chi2=0.0013195926105111155 (change=75.79389806272594 %)
[2024-05-16 17:23:08] 2024-05-16 15:22:48,522 | INFO     | model: linear, x: [1715854537.0, 1715854598.0, 1715854659.0, 1715854720.0, 1715854781.0, 1715854842.0, 1715854903.0, 1715854964.0, 1715855025.0, 1715855086.0, 1715
[2024-05-16 17:23:08] 2024-05-16 15:22:48,522 | INFO     | sum of square deviations: 8540720135.5
[2024-05-16 17:23:08] 2024-05-16 15:22:48,524 | INFO     | sum of deviations: 11564580140.999998
[2024-05-16 17:23:08] 2024-05-16 15:22:48,524 | INFO     | mean x: 1715863717.5
[2024-05-16 17:23:08] 2024-05-16 15:22:48,524 | INFO     | mean y: 2348196.5562913907
[2024-05-16 17:23:08] 2024-05-16 15:22:48,524 | INFO     | -- intersect: -2321020694.7370005
[2024-05-16 17:23:08] 2024-05-16 15:22:48,524 | INFO     | intersect: -2321020694.7370005
[2024-05-16 17:23:08] 2024-05-16 15:22:48,524 | INFO     | chi2: 0.00076158637363583
[2024-05-16 17:23:08] 2024-05-16 15:22:48,524 | INFO     | current chi2=0.00076158637363583 (change=42.2862505011417 %)
[2024-05-16 17:23:08] 2024-05-16 15:22:48,525 | INFO     | model: linear, x: [1715854842.0, 1715854903.0, 1715854964.0, 1715855025.0, 1715855086.0, 1715855147.0, 1715855208.0, 1715855269.0, 1715855330.0, 1715855391.0, 1715
[2024-05-16 17:23:08] 2024-05-16 15:22:48,525 | INFO     | sum of square deviations: 8123493708.0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,526 | INFO     | sum of deviations: 10338991259.999996
[2024-05-16 17:23:08] 2024-05-16 15:22:48,526 | INFO     | mean x: 1715863870.0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,526 | INFO     | mean y: 2348644.441077441
[2024-05-16 17:23:08] 2024-05-16 15:22:48,526 | INFO     | -- intersect: -2181477944.580486
[2024-05-16 17:23:08] 2024-05-16 15:22:48,526 | INFO     | intersect: -2181477944.580486
[2024-05-16 17:23:08] 2024-05-16 15:22:48,527 | INFO     | chi2: 0.0005592901101743028
[2024-05-16 17:23:08] 2024-05-16 15:22:48,527 | INFO     | current chi2=0.0005592901101743028 (change=26.562484632670152 %)
[2024-05-16 17:23:08] 2024-05-16 15:22:48,527 | INFO     | model: linear, x: [1715855147.0, 1715855208.0, 1715855269.0, 1715855330.0, 1715855391.0, 1715855452.0, 1715855513.0, 1715855574.0, 1715855635.0, 1715855696.0, 1715
[2024-05-16 17:23:08] 2024-05-16 15:22:48,527 | INFO     | sum of square deviations: 7720081493.0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,528 | INFO     | sum of deviations: 9438401473.0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,529 | INFO     | mean x: 1715864022.5
[2024-05-16 17:23:08] 2024-05-16 15:22:48,529 | INFO     | mean y: 2348984.609589041
[2024-05-16 17:23:08] 2024-05-16 15:22:48,529 | INFO     | -- intersect: -2095428549.4897788
[2024-05-16 17:23:08] 2024-05-16 15:22:48,529 | INFO     | intersect: -2095428549.4897788
[2024-05-16 17:23:08] 2024-05-16 15:22:48,529 | INFO     | chi2: 0.00048242505505068225
[2024-05-16 17:23:08] 2024-05-16 15:22:48,529 | INFO     | current chi2=0.00048242505505068225 (change=13.743324569008655 %)
[2024-05-16 17:23:08] 2024-05-16 15:22:48,529 | INFO     | left removable region: 80
[2024-05-16 17:23:08] 2024-05-16 15:22:48,529 | INFO     | model: linear, x: [1715857587.0, 1715857648.0, 1715857709.0, 1715857770.0, 1715857831.0, 1715857892.0, 1715857953.0, 1715858014.0, 1715858075.0, 1715858136.0, 1715
[2024-05-16 17:23:08] 2024-05-16 15:22:48,529 | INFO     | sum of square deviations: 4616114457.5
[2024-05-16 17:23:08] 2024-05-16 15:22:48,530 | INFO     | sum of deviations: 4143932245.5
[2024-05-16 17:23:08] 2024-05-16 15:22:48,531 | INFO     | mean x: 1715865059.5
[2024-05-16 17:23:08] 2024-05-16 15:22:48,531 | INFO     | mean y: 2350804.1910569104
[2024-05-16 17:23:08] 2024-05-16 15:22:48,531 | INFO     | -- intersect: -1537998468.8726137
[2024-05-16 17:23:08] 2024-05-16 15:22:48,531 | INFO     | intersect: -1537998468.8726137
[2024-05-16 17:23:08] 2024-05-16 15:22:48,531 | INFO     | chi2: 0.0002363623419579276
[2024-05-16 17:23:08] 2024-05-16 15:22:48,531 | INFO     | -- intersect: -1537998468.8726137
[2024-05-16 17:23:08] 2024-05-16 15:22:48,531 | INFO     | current memory leak: 0.90 B/s (using 246 data points, chi2=0.00)
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | ..............................
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | . Timing measurements:
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | . get job = 0 s
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | . initial setup = 1 s
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | . payload setup = 4 s
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | . stage-in = 0 s
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | . payload execution = 20252 s
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | . stage-out = 0 s
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | . log creation = 0 s
[2024-05-16 17:23:08] 2024-05-16 15:22:48,532 | INFO     | ..............................
[2024-05-16 17:23:08] 2024-05-16 15:22:48,930 | INFO     | 
[2024-05-16 17:23:08] 2024-05-16 15:22:48,930 | INFO     | job summary report
[2024-05-16 17:23:08] 2024-05-16 15:22:48,931 | INFO     | --------------------------------------------------
[2024-05-16 17:23:08] 2024-05-16 15:22:48,931 | INFO     | PanDA job id: 6205827736
[2024-05-16 17:23:08] 2024-05-16 15:22:48,931 | INFO     | task id: 38776146
[2024-05-16 17:23:08] 2024-05-16 15:22:48,931 | INFO     | errors: (none)
[2024-05-16 17:23:08] 2024-05-16 15:22:48,931 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 17:23:08] 2024-05-16 15:22:48,931 | INFO     | pilot state: finished 
[2024-05-16 17:23:08] 2024-05-16 15:22:48,931 | INFO     | transexitcode: 0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,932 | INFO     | exeerrorcode: 0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,932 | INFO     | exeerrordiag: 
[2024-05-16 17:23:08] 2024-05-16 15:22:48,932 | INFO     | exitcode: 0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,932 | INFO     | exitmsg: OK
[2024-05-16 17:23:08] 2024-05-16 15:22:48,932 | INFO     | cpuconsumptiontime: 77560 s
[2024-05-16 17:23:08] 2024-05-16 15:22:48,932 | INFO     | nevents: 400
[2024-05-16 17:23:08] 2024-05-16 15:22:48,932 | INFO     | neventsw: 0
[2024-05-16 17:23:08] 2024-05-16 15:22:48,932 | INFO     | pid: 471906
[2024-05-16 17:23:08] 2024-05-16 15:22:48,933 | INFO     | pgrp: 471906
[2024-05-16 17:23:08] 2024-05-16 15:22:48,933 | INFO     | corecount: 4
[2024-05-16 17:23:08] 2024-05-16 15:22:48,933 | INFO     | event service: False
[2024-05-16 17:23:08] 2024-05-16 15:22:48,933 | INFO     | sizes: {0: 2392193, 3: 2392399, 11: 2392427, 20260: 2425782, 20262: 2434820, 20271: 2434934}
[2024-05-16 17:23:08] 2024-05-16 15:22:48,933 | INFO     | --------------------------------------------------
[2024-05-16 17:23:08] 2024-05-16 15:22:48,933 | INFO     | 
[2024-05-16 17:23:08] 2024-05-16 15:22:48,933 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-05-16 17:23:08] 2024-05-16 15:22:48,955 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,955 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,955 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,956 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,956 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,958 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 17:23:08] 2024-05-16 15:22:48,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,958 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 17:23:08] 2024-05-16 15:22:48,958 | INFO     | job 6205827736 has completed (purged errors)
[2024-05-16 17:23:08] 2024-05-16 15:22:48,958 | INFO     | overall cleanup function is called
[2024-05-16 17:23:08] 2024-05-16 15:22:49,966 | INFO     | --- collectZombieJob: --- 10, [471906]
[2024-05-16 17:23:08] 2024-05-16 15:22:49,966 | INFO     | zombie collector waiting for pid 471906
[2024-05-16 17:23:08] 2024-05-16 15:22:49,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 17:23:08] 2024-05-16 15:22:50,971 | INFO     | collected zombie processes
[2024-05-16 17:23:08] 2024-05-16 15:22:50,971 | INFO     | will now attempt to kill all subprocesses of pid=471906
[2024-05-16 17:23:08] 2024-05-16 15:22:51,103 | INFO     | process IDs to be killed: [471906] (in reverse order)
[2024-05-16 17:23:08] 2024-05-16 15:22:51,190 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 17:23:08] 2024-05-16 15:22:51,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 17:23:08] 2024-05-16 15:22:51,195 | INFO     | did not find any defunct processes belonging to 471906
[2024-05-16 17:23:08] 2024-05-16 15:22:51,200 | INFO     | did not find any defunct processes belonging to 471906
[2024-05-16 17:23:08] 2024-05-16 15:22:51,200 | INFO     | ready for new job
[2024-05-16 17:23:08] 2024-05-16 15:22:51,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 17:23:08] 2024-05-16 15:22:51,201 | INFO     | *************************************
[2024-05-16 17:23:08] 2024-05-16 15:22:51,202 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 17:23:08] 2024-05-16 15:22:51,202 | INFO     | *************************************
[2024-05-16 17:23:08] 2024-05-16 15:22:51,202 | INFO     | 
[2024-05-16 17:23:08] 2024-05-16 15:22:51,203 | INFO     | architecture information:
[2024-05-16 17:23:08] 2024-05-16 15:22:51,203 | INFO     | executing command: cat /etc/os-release
[2024-05-16 17:23:08] 2024-05-16 15:22:51,215 | INFO     | cat /etc/os-release:
[2024-05-16 17:23:08] NAME="CentOS Linux"
[2024-05-16 17:23:08] VERSION="7 (Core)"
[2024-05-16 17:23:08] ID="centos"
[2024-05-16 17:23:08] ID_LIKE="rhel fedora"
[2024-05-16 17:23:08] VERSION_ID="7"
[2024-05-16 17:23:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 17:23:08] ANSI_COLOR="0;31"
[2024-05-16 17:23:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 17:23:08] HOME_URL="https://www.centos.org/"
[2024-05-16 17:23:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 17:23:08] 
[2024-05-16 17:23:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 17:23:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 17:23:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 17:23:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 17:23:08] 
[2024-05-16 17:23:08] 2024-05-16 15:22:51,215 | INFO     | *************************************
[2024-05-16 17:23:08] 2024-05-16 15:22:51,718 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-05-16 17:23:08] 2024-05-16 15:22:51,736 | INFO     | sufficient remaining disk space (1603610345472 B)
[2024-05-16 17:23:08] 2024-05-16 15:22:51,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 17:23:08] 2024-05-16 15:22:51,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 17:23:08] 2024-05-16 15:22:51,737 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 17:23:08] 2024-05-16 15:22:51,737 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 17:23:08] 2024-05-16 15:22:51,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 17:23:08] 2024-05-16 15:22:51,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 17:23:08] 2024-05-16 15:22:51,753 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 17:23:08] 2024-05-16 15:22:51,753 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 17:23:08] 2024-05-16 15:22:51,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:23:08] 2024-05-16 15:22:51,754 | INFO     | will abort loop
[2024-05-16 17:23:08] 2024-05-16 15:22:52,229 | INFO     | all job control threads have been joined
[2024-05-16 17:23:08] 2024-05-16 15:22:52,531 | INFO     | all data control threads have been joined
[2024-05-16 17:23:08] 2024-05-16 15:22:52,741 | INFO     | [job] retrieve thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:52,758 | INFO     | [job] job monitor thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:52,861 | INFO     | all payload control threads have been joined
[2024-05-16 17:23:08] 2024-05-16 15:22:52,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 17:23:08] 2024-05-16 15:22:52,992 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:53,234 | INFO     | [job] control thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:53,536 | INFO     | [data] control thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:53,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:23:08] 2024-05-16 15:22:53,619 | INFO     | [payload] validate_post thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:53,854 | INFO     | [job] validate thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:53,866 | INFO     | [payload] control thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:54,022 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:54,159 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:54,212 | INFO     | [data] copytool_in thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:54,241 | INFO     | [payload] failed_post thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:54,603 | INFO     | [job] queue monitor thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:54,959 | INFO     | [data] copytool_out thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:22:55,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 17:23:08] 2024-05-16 15:22:59,024 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:23:01,910 | INFO     | job.realtimelogging is not enabled
[2024-05-16 17:23:08] 2024-05-16 15:23:02,915 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 17:23:08] 2024-05-16 15:23:02,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47185383011392)>', '<ExcThread(monitor, started 47185560565504)>']
[2024-05-16 17:23:08] 2024-05-16 15:23:03,792 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 17:23:08] 2024-05-16 15:23:03,792 | INFO     | [monitor] control thread has ended
[2024-05-16 17:23:08] 2024-05-16 15:23:08,011 | INFO     | all workflow threads have been joined
[2024-05-16 17:23:08] 2024-05-16 15:23:08,012 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 17:23:08] 2024-05-16 15:23:08,013 | INFO     | traces error code: 0
[2024-05-16 17:23:08] 2024-05-16 15:23:08,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 17:23:08] 2024-05-16 15:23:08,073 [wrapper] ==== pilot stdout END ====
[2024-05-16 17:23:08] 2024-05-16 15:23:08,076 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 17:23:08] 2024-05-16 15:23:08,078 [wrapper] pilotpid: 464564
[2024-05-16 17:23:08] 2024-05-16 15:23:08,080 [wrapper] Pilot exit status: 0
[2024-05-16 17:23:08] 2024-05-16 15:23:08,086 [wrapper] pandaids: 6205827736
[2024-05-16 17:23:08] 2024-05-16 15:23:08,128 [wrapper] cleanup: SIGTERM to supervisor_pilot 1018779 464565
[2024-05-16 17:23:08] 2024-05-16 15:23:08,130 [wrapper] Test setup, not cleaning
[2024-05-16 17:23:08] 2024-05-16 15:23:08,132 [wrapper] ==== wrapper stdout END ====
[2024-05-16 17:23:08] 2024-05-16 15:23:08,134 [wrapper] ==== wrapper stderr END ====
[2024-05-16 17:23:08] 2024-05-16 15:23:08,138 [wrapper] apfmon messages muted
[2024-05-16 17:23:08]  *** Error codes and diagnostics ***
[2024-05-16 17:23:08]     "exeErrorCode": 0,
[2024-05-16 17:23:08]     "exeErrorDiag": "",
[2024-05-16 17:23:08]     "pilotErrorCode": 0,
[2024-05-16 17:23:08]     "pilotErrorDiag": "",
[2024-05-16 17:23:08]  *** Listing of results directory ***
[2024-05-16 17:23:08] total 873432
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc    467845 May 13 12:35 pilot3.tar.gz
[2024-05-16 17:23:08] -rwx------ 1 boinc boinc     32251 May 13 12:43 runpilot2-wrapper.sh
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc      5633 May 13 12:43 queuedata.json
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc       100 May 16 11:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 17:23:08] -rwxr-xr-x 1 boinc boinc      7986 May 16 11:44 run_atlas
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc       105 May 16 11:44 job.xml
[2024-05-16 17:23:08] -rw-r--r-- 2 boinc boinc 614615192 May 16 11:44 EVNT.38776140._000192.pool.root.1
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc      6457 May 16 11:44 init_data.xml
[2024-05-16 17:23:08] drwxrwx--x 2 boinc boinc      4096 May 16 11:44 shared
[2024-05-16 17:23:08] -rw-r--r-- 2 boinc boinc    479991 May 16 11:44 input.tar.gz
[2024-05-16 17:23:08] -rw-r--r-- 2 boinc boinc     17537 May 16 11:44 start_atlas.sh
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc         0 May 16 11:44 boinc_lockfile
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc      2621 May 16 11:44 pandaJob.out
[2024-05-16 17:23:08] -rw------- 1 boinc boinc       424 May 16 11:44 setup.sh.local
[2024-05-16 17:23:08] -rw------- 1 boinc boinc   1010326 May 16 11:44 agis_schedconf.cvmfs.json
[2024-05-16 17:23:08] -rw------- 1 boinc boinc   1324701 May 16 11:44 cric_ddmendpoints.json
[2024-05-16 17:23:08] drwx------ 4 boinc boinc      4096 May 16 11:44 pilot3
[2024-05-16 17:23:08] -rw------- 1 boinc boinc 270452310 May 16 17:22 HITS.38776146._004790.pool.root.1
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc       531 May 16 17:22 boinc_task_state.xml
[2024-05-16 17:23:08] -rw------- 1 boinc boinc      1049 May 16 17:22 memory_monitor_summary.json
[2024-05-16 17:23:08] -rw------- 1 boinc boinc         0 May 16 17:22 agis_ddmendpoints.agis.ALL.json
[2024-05-16 17:23:08] -rw------- 1 boinc boinc    416139 May 16 17:22 log.38776146._004790.job.log.tgz.1
[2024-05-16 17:23:08] -rw------- 1 boinc boinc        95 May 16 17:22 pilot_heartbeat.json
[2024-05-16 17:23:08] -rw------- 1 boinc boinc      7766 May 16 17:22 heartbeat.json
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc      8192 May 16 17:22 boinc_mmap_file
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc        28 May 16 17:22 wrapper_checkpoint.txt
[2024-05-16 17:23:08] -rw------- 1 boinc boinc      4603 May 16 17:23 pilotlog.txt
[2024-05-16 17:23:08] -rw------- 1 boinc boinc   2482619 May 16 17:23 log.38776146._004790.job.log.1
[2024-05-16 17:23:08] -rw------- 1 boinc boinc       357 May 16 17:23 output.list
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc       620 May 16 17:23 runtime_log
[2024-05-16 17:23:08] -rw------- 1 boinc boinc   2918400 May 16 17:23 result.tar.gz
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc     11410 May 16 17:23 runtime_log.err
[2024-05-16 17:23:08] -rw------- 1 boinc boinc       659 May 16 17:23 5iAODmQKiQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWPKKDm8nz6Im.diag
[2024-05-16 17:23:08] -rw-r--r-- 1 boinc boinc     21413 May 16 17:23 stderr.txt
[2024-05-16 17:23:08] HITS file was successfully produced:
[2024-05-16 17:23:08] -rw------- 1 boinc boinc 270452310 May 16 17:22 shared/HITS.pool.root.1
[2024-05-16 17:23:08]  *** Contents of shared directory: ***
[2024-05-16 17:23:08] total 867680
[2024-05-16 17:23:08] -rw-r--r-- 2 boinc boinc 614615192 May 16 11:44 ATLAS.root_0
[2024-05-16 17:23:08] -rw-r--r-- 2 boinc boinc    479991 May 16 11:44 input.tar.gz
[2024-05-16 17:23:08] -rw-r--r-- 2 boinc boinc     17537 May 16 11:44 start_atlas.sh
[2024-05-16 17:23:08] -rw------- 1 boinc boinc 270452310 May 16 17:22 HITS.pool.root.1
[2024-05-16 17:23:08] -rw------- 1 boinc boinc   2918400 May 16 17:23 result.tar.gz
17:23:10 (460311): run_atlas exited; CPU time 77235.441777
17:23:10 (460311): called boinc_finish(0)

</stderr_txt>
]]>

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