Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:46:04 (2081144): wrapper (7.7.26015): starting
13:46:04 (2081144): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 13:46:04] Arguments: --nthreads 4
[2024-05-16 13:46:04] Threads: 4
[2024-05-16 13:46:04] Checking for CVMFS
[2024-05-16 13:46:04] No cvmfs_config command found, will try listing directly
[2024-05-16 13:46:04] CVMFS is ok
[2024-05-16 13:46:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 13:46:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 13:46:04] Further information can be found at the LHC@home message board.
[2024-05-16 13:46:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 13:46:04] Checking for apptainer binary...
[2024-05-16 13:46:04] which: no apptainer in ((null))
[2024-05-16 13:46:04] apptainer is not installed, using version from CVMFS
[2024-05-16 13:46:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 13:46:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-05-16 13:46:05] apptainer works
[2024-05-16 13:46:05] Set ATHENA_PROC_NUMBER=4
[2024-05-16 13:46:05] Set ATHENA_CORE_NUMBER=4
[2024-05-16 13:46:05] Starting ATLAS job with PandaID=6205827684
[2024-05-16 13:46:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 19:50:28]  *** The last 200 lines of the pilot log: ***
[2024-05-16 19:50:28] 2024-05-16 17:50:12,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 19:50:28] 2024-05-16 17:50:12,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 19:50:28] 2024-05-16 17:50:12,695 | INFO     | fitting pss+swap vs Time
[2024-05-16 19:50:28] 2024-05-16 17:50:12,695 | INFO     | model: linear, x: [1715859998.0, 1715860059.0, 1715860120.0, 1715860181.0, 1715860242.0, 1715860303.0, 1715860364.0, 1715860425.0, 1715860486.0, 1715860547.0, 1715
[2024-05-16 19:50:28] 2024-05-16 17:50:12,695 | INFO     | sum of square deviations: 14227353269.5
[2024-05-16 19:50:28] 2024-05-16 17:50:12,697 | INFO     | sum of deviations: 143426741019.50003
[2024-05-16 19:50:28] 2024-05-16 17:50:12,697 | INFO     | mean x: 1715870886.5
[2024-05-16 19:50:28] 2024-05-16 17:50:12,698 | INFO     | mean y: 2310169.751396648
[2024-05-16 19:50:28] 2024-05-16 17:50:12,698 | INFO     | -- intersect: -17295479840.74325
[2024-05-16 19:50:28] 2024-05-16 17:50:12,698 | INFO     | intersect: -17295479840.74325
[2024-05-16 19:50:28] 2024-05-16 17:50:12,698 | INFO     | chi2: 4.876919561487247
[2024-05-16 19:50:28] 2024-05-16 17:50:12,698 | INFO     | model: linear, x: [1715859998.0, 1715860059.0, 1715860120.0, 1715860181.0, 1715860242.0, 1715860303.0, 1715860364.0, 1715860425.0, 1715860486.0, 1715860547.0, 1715
[2024-05-16 19:50:28] 2024-05-16 17:50:12,698 | INFO     | sum of square deviations: 13639518992.0
[2024-05-16 19:50:28] 2024-05-16 17:50:12,700 | INFO     | sum of deviations: 163591805862.99997
[2024-05-16 19:50:28] 2024-05-16 17:50:12,700 | INFO     | mean x: 1715870734.0
[2024-05-16 19:50:28] 2024-05-16 17:50:12,701 | INFO     | mean y: 2315335.2492917846
[2024-05-16 19:50:28] 2024-05-16 17:50:12,701 | INFO     | -- intersect: -20577764663.69876
[2024-05-16 19:50:28] 2024-05-16 17:50:12,701 | INFO     | intersect: -20577764663.69876
[2024-05-16 19:50:28] 2024-05-16 17:50:12,701 | INFO     | chi2: 4.114625172724957
[2024-05-16 19:50:28] 2024-05-16 17:50:12,701 | INFO     | current chi2=4.114625172724957 (change=15.63065330792176 %)
[2024-05-16 19:50:28] 2024-05-16 17:50:12,701 | INFO     | right removable region: 352
[2024-05-16 19:50:28] 2024-05-16 17:50:12,701 | INFO     | model: linear, x: [1715860303.0, 1715860364.0, 1715860425.0, 1715860486.0, 1715860547.0, 1715860608.0, 1715860669.0, 1715860730.0, 1715860791.0, 1715860852.0, 1715
[2024-05-16 19:50:28] 2024-05-16 17:50:12,702 | INFO     | sum of square deviations: 13639518992.0
[2024-05-16 19:50:28] 2024-05-16 17:50:12,703 | INFO     | sum of deviations: 58262000482.000015
[2024-05-16 19:50:28] 2024-05-16 17:50:12,704 | INFO     | mean x: 1715871039.0
[2024-05-16 19:50:28] 2024-05-16 17:50:12,704 | INFO     | mean y: 2332227.498583569
[2024-05-16 19:50:28] 2024-05-16 17:50:12,704 | INFO     | -- intersect: -7327110941.274701
[2024-05-16 19:50:28] 2024-05-16 17:50:12,704 | INFO     | intersect: -7327110941.274701
[2024-05-16 19:50:28] 2024-05-16 17:50:12,704 | INFO     | chi2: 2.3579383954474507
[2024-05-16 19:50:28] 2024-05-16 17:50:12,704 | INFO     | current chi2=2.3579383954474507 (change=51.651070604732666 %)
[2024-05-16 19:50:28] 2024-05-16 17:50:12,704 | INFO     | model: linear, x: [1715860608.0, 1715860669.0, 1715860730.0, 1715860791.0, 1715860852.0, 1715860913.0, 1715860974.0, 1715861035.0, 1715861096.0, 1715861157.0, 1715
[2024-05-16 19:50:28] 2024-05-16 17:50:12,705 | INFO     | sum of square deviations: 13068103627.0
[2024-05-16 19:50:28] 2024-05-16 17:50:12,706 | INFO     | sum of deviations: -9570341697.499996
[2024-05-16 19:50:28] 2024-05-16 17:50:12,707 | INFO     | mean x: 1715871191.5
[2024-05-16 19:50:28] 2024-05-16 17:50:12,707 | INFO     | mean y: 2350330.870689655
[2024-05-16 19:50:28] 2024-05-16 17:50:12,707 | INFO     | -- intersect: 1258957569.4009273
[2024-05-16 19:50:28] 2024-05-16 17:50:12,707 | INFO     | intersect: 1258957569.4009273
[2024-05-16 19:50:28] 2024-05-16 17:50:12,707 | INFO     | chi2: 0.8847872245475688
[2024-05-16 19:50:28] 2024-05-16 17:50:12,707 | INFO     | current chi2=0.8847872245475688 (change=62.47623660330327 %)
[2024-05-16 19:50:28] 2024-05-16 17:50:12,707 | INFO     | model: linear, x: [1715860913.0, 1715860974.0, 1715861035.0, 1715861096.0, 1715861157.0, 1715861218.0, 1715861279.0, 1715861340.0, 1715861401.0, 1715861462.0, 1715
[2024-05-16 19:50:28] 2024-05-16 17:50:12,708 | INFO     | sum of square deviations: 12512874612.0
[2024-05-16 19:50:28] 2024-05-16 17:50:12,709 | INFO     | sum of deviations: -20900090230.0
[2024-05-16 19:50:28] 2024-05-16 17:50:12,709 | INFO     | mean x: 1715871344.0
[2024-05-16 19:50:28] 2024-05-16 17:50:12,709 | INFO     | mean y: 2353417.612244898
[2024-05-16 19:50:28] 2024-05-16 17:50:12,710 | INFO     | -- intersect: 2868350802.2803054
[2024-05-16 19:50:28] 2024-05-16 17:50:12,710 | INFO     | intersect: 2868350802.2803054
[2024-05-16 19:50:28] 2024-05-16 17:50:12,710 | INFO     | chi2: 0.7984231679972844
[2024-05-16 19:50:28] 2024-05-16 17:50:12,710 | INFO     | current chi2=0.7984231679972844 (change=9.760997238002181 %)
[2024-05-16 19:50:28] 2024-05-16 17:50:12,710 | INFO     | left removable region: 30
[2024-05-16 19:50:28] 2024-05-16 17:50:12,710 | INFO     | model: linear, x: [1715861828.0, 1715861889.0, 1715861950.0, 1715862011.0, 1715862072.0, 1715862133.0, 1715862194.0, 1715862255.0, 1715862316.0, 1715862377.0, 1715
[2024-05-16 19:50:28] 2024-05-16 17:50:12,710 | INFO     | sum of square deviations: 10352419220.5
[2024-05-16 19:50:28] 2024-05-16 17:50:12,712 | INFO     | sum of deviations: 6718452098.999998
[2024-05-16 19:50:28] 2024-05-16 17:50:12,712 | INFO     | mean x: 1715871618.5
[2024-05-16 19:50:28] 2024-05-16 17:50:12,712 | INFO     | mean y: 2357590.254658385
[2024-05-16 19:50:28] 2024-05-16 17:50:12,712 | INFO     | -- intersect: -1111198674.3620164
[2024-05-16 19:50:28] 2024-05-16 17:50:12,712 | INFO     | intersect: -1111198674.3620164
[2024-05-16 19:50:28] 2024-05-16 17:50:12,713 | INFO     | chi2: 0.003338896188706491
[2024-05-16 19:50:28] 2024-05-16 17:50:12,713 | INFO     | -- intersect: -1111198674.3620164
[2024-05-16 19:50:28] 2024-05-16 17:50:12,713 | INFO     | current memory leak: 0.65 B/s (using 322 data points, chi2=0.00)
[2024-05-16 19:50:28] 2024-05-16 17:50:12,713 | INFO     | ..............................
[2024-05-16 19:50:28] 2024-05-16 17:50:12,713 | INFO     | . Timing measurements:
[2024-05-16 19:50:28] 2024-05-16 17:50:12,713 | INFO     | . get job = 0 s
[2024-05-16 19:50:28] 2024-05-16 17:50:12,713 | INFO     | . initial setup = 1 s
[2024-05-16 19:50:28] 2024-05-16 17:50:12,714 | INFO     | . payload setup = 4 s
[2024-05-16 19:50:28] 2024-05-16 17:50:12,714 | INFO     | . stage-in = 0 s
[2024-05-16 19:50:28] 2024-05-16 17:50:12,714 | INFO     | . payload execution = 21804 s
[2024-05-16 19:50:28] 2024-05-16 17:50:12,714 | INFO     | . stage-out = 1 s
[2024-05-16 19:50:28] 2024-05-16 17:50:12,714 | INFO     | . log creation = 0 s
[2024-05-16 19:50:28] 2024-05-16 17:50:12,714 | INFO     | ..............................
[2024-05-16 19:50:28] 2024-05-16 17:50:13,095 | INFO     | 
[2024-05-16 19:50:28] 2024-05-16 17:50:13,096 | INFO     | job summary report
[2024-05-16 19:50:28] 2024-05-16 17:50:13,096 | INFO     | --------------------------------------------------
[2024-05-16 19:50:28] 2024-05-16 17:50:13,096 | INFO     | PanDA job id: 6205827684
[2024-05-16 19:50:28] 2024-05-16 17:50:13,096 | INFO     | task id: 38776146
[2024-05-16 19:50:28] 2024-05-16 17:50:13,096 | INFO     | errors: (none)
[2024-05-16 19:50:28] 2024-05-16 17:50:13,096 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 19:50:28] 2024-05-16 17:50:13,096 | INFO     | pilot state: finished 
[2024-05-16 19:50:28] 2024-05-16 17:50:13,096 | INFO     | transexitcode: 0
[2024-05-16 19:50:28] 2024-05-16 17:50:13,097 | INFO     | exeerrorcode: 0
[2024-05-16 19:50:28] 2024-05-16 17:50:13,097 | INFO     | exeerrordiag: 
[2024-05-16 19:50:28] 2024-05-16 17:50:13,097 | INFO     | exitcode: 0
[2024-05-16 19:50:28] 2024-05-16 17:50:13,097 | INFO     | exitmsg: OK
[2024-05-16 19:50:28] 2024-05-16 17:50:13,097 | INFO     | cpuconsumptiontime: 84120 s
[2024-05-16 19:50:28] 2024-05-16 17:50:13,097 | INFO     | nevents: 400
[2024-05-16 19:50:28] 2024-05-16 17:50:13,097 | INFO     | neventsw: 0
[2024-05-16 19:50:28] 2024-05-16 17:50:13,097 | INFO     | pid: 2092321
[2024-05-16 19:50:28] 2024-05-16 17:50:13,097 | INFO     | pgrp: 2092321
[2024-05-16 19:50:28] 2024-05-16 17:50:13,098 | INFO     | corecount: 4
[2024-05-16 19:50:28] 2024-05-16 17:50:13,098 | INFO     | event service: False
[2024-05-16 19:50:28] 2024-05-16 17:50:13,098 | INFO     | sizes: {0: 2392014, 1: 2392213, 4: 2392419, 11: 2392447, 21813: 2426655, 21815: 2435637, 21818: 2435821, 21824: 2435991}
[2024-05-16 19:50:28] 2024-05-16 17:50:13,098 | INFO     | --------------------------------------------------
[2024-05-16 19:50:28] 2024-05-16 17:50:13,098 | INFO     | 
[2024-05-16 19:50:28] 2024-05-16 17:50:13,098 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-05-16 19:50:28] 2024-05-16 17:50:13,123 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,123 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,123 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,124 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,125 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 19:50:28] 2024-05-16 17:50:13,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,126 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 19:50:28] 2024-05-16 17:50:13,126 | INFO     | job 6205827684 has completed (purged errors)
[2024-05-16 19:50:28] 2024-05-16 17:50:13,126 | INFO     | overall cleanup function is called
[2024-05-16 19:50:28] 2024-05-16 17:50:14,132 | INFO     | --- collectZombieJob: --- 10, [2092321]
[2024-05-16 19:50:28] 2024-05-16 17:50:14,132 | INFO     | zombie collector waiting for pid 2092321
[2024-05-16 19:50:28] 2024-05-16 17:50:14,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 19:50:28] 2024-05-16 17:50:15,137 | INFO     | collected zombie processes
[2024-05-16 19:50:28] 2024-05-16 17:50:15,138 | INFO     | will now attempt to kill all subprocesses of pid=2092321
[2024-05-16 19:50:28] 2024-05-16 17:50:15,267 | INFO     | process IDs to be killed: [2092321] (in reverse order)
[2024-05-16 19:50:28] 2024-05-16 17:50:15,360 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 19:50:28] 2024-05-16 17:50:15,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 19:50:28] 2024-05-16 17:50:15,368 | INFO     | did not find any defunct processes belonging to 2092321
[2024-05-16 19:50:28] 2024-05-16 17:50:15,374 | INFO     | did not find any defunct processes belonging to 2092321
[2024-05-16 19:50:28] 2024-05-16 17:50:15,374 | INFO     | ready for new job
[2024-05-16 19:50:28] 2024-05-16 17:50:15,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 19:50:28] 2024-05-16 17:50:15,377 | INFO     | *************************************
[2024-05-16 19:50:28] 2024-05-16 17:50:15,377 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 19:50:28] 2024-05-16 17:50:15,377 | INFO     | *************************************
[2024-05-16 19:50:28] 2024-05-16 17:50:15,377 | INFO     | 
[2024-05-16 19:50:28] 2024-05-16 17:50:15,380 | INFO     | architecture information:
[2024-05-16 19:50:28] 2024-05-16 17:50:15,380 | INFO     | executing command: cat /etc/os-release
[2024-05-16 19:50:28] 2024-05-16 17:50:15,394 | INFO     | cat /etc/os-release:
[2024-05-16 19:50:28] NAME="CentOS Linux"
[2024-05-16 19:50:28] VERSION="7 (Core)"
[2024-05-16 19:50:28] ID="centos"
[2024-05-16 19:50:28] ID_LIKE="rhel fedora"
[2024-05-16 19:50:28] VERSION_ID="7"
[2024-05-16 19:50:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 19:50:28] ANSI_COLOR="0;31"
[2024-05-16 19:50:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 19:50:28] HOME_URL="https://www.centos.org/"
[2024-05-16 19:50:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 19:50:28] 
[2024-05-16 19:50:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 19:50:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 19:50:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 19:50:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 19:50:28] 
[2024-05-16 19:50:28] 2024-05-16 17:50:15,394 | INFO     | *************************************
[2024-05-16 19:50:28] 2024-05-16 17:50:15,897 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-05-16 19:50:28] 2024-05-16 17:50:15,916 | INFO     | sufficient remaining disk space (1604130439168 B)
[2024-05-16 19:50:28] 2024-05-16 17:50:15,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 19:50:28] 2024-05-16 17:50:15,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 19:50:28] 2024-05-16 17:50:15,917 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 19:50:28] 2024-05-16 17:50:15,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 19:50:28] 2024-05-16 17:50:15,918 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 19:50:28] 2024-05-16 17:50:15,918 | INFO     | aborting loop
[2024-05-16 19:50:28] 2024-05-16 17:50:15,919 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 19:50:28] 2024-05-16 17:50:15,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 19:50:28] 2024-05-16 17:50:16,013 | INFO     | all payload control threads have been joined
[2024-05-16 19:50:28] 2024-05-16 17:50:16,106 | INFO     | all data control threads have been joined
[2024-05-16 19:50:28] 2024-05-16 17:50:16,287 | INFO     | all job control threads have been joined
[2024-05-16 19:50:28] 2024-05-16 17:50:16,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 19:50:28] 2024-05-16 17:50:16,923 | INFO     | [job] retrieve thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:16,924 | INFO     | [job] job monitor thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:16,962 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:17,019 | INFO     | [payload] control thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:17,112 | INFO     | [data] control thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:17,293 | INFO     | [job] control thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:17,314 | INFO     | [job] validate thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:17,322 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:17,415 | INFO     | [payload] validate_post thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:17,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 19:50:28] 2024-05-16 17:50:17,759 | INFO     | [payload] failed_post thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:17,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 19:50:28] 2024-05-16 17:50:17,815 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:18,267 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:18,364 | INFO     | [data] copytool_in thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:18,780 | INFO     | [data] copytool_out thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:18,785 | INFO     | [job] queue monitor thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:21,627 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 19:50:28] 2024-05-16 17:50:22,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47954370360384)>', '<ExcThread(monitor, started 47954564724480)>']
[2024-05-16 19:50:28] 2024-05-16 17:50:22,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 19:50:28] 2024-05-16 17:50:22,954 | INFO     | [monitor] control thread has ended
[2024-05-16 19:50:28] 2024-05-16 17:50:27,626 | INFO     | all workflow threads have been joined
[2024-05-16 19:50:28] 2024-05-16 17:50:27,627 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 19:50:28] 2024-05-16 17:50:27,627 | INFO     | traces error code: 0
[2024-05-16 19:50:28] 2024-05-16 17:50:27,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 19:50:28] 2024-05-16 17:50:27,733 [wrapper] ==== pilot stdout END ====
[2024-05-16 19:50:28] 2024-05-16 17:50:27,743 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 19:50:28] 2024-05-16 17:50:27,761 [wrapper] pilotpid: 2085448
[2024-05-16 19:50:28] 2024-05-16 17:50:27,781 [wrapper] Pilot exit status: 0
[2024-05-16 19:50:28] 2024-05-16 17:50:27,881 [wrapper] pandaids: 6205827684
[2024-05-16 19:50:28] 2024-05-16 17:50:27,950 [wrapper] cleanup: SIGTERM to supervisor_pilot 2625134 2085449
[2024-05-16 19:50:28] 2024-05-16 17:50:27,961 [wrapper] Test setup, not cleaning
[2024-05-16 19:50:28] 2024-05-16 17:50:27,968 [wrapper] ==== wrapper stdout END ====
[2024-05-16 19:50:28] 2024-05-16 17:50:27,979 [wrapper] ==== wrapper stderr END ====
[2024-05-16 19:50:28] 2024-05-16 17:50:28,003 [wrapper] apfmon messages muted
[2024-05-16 19:50:28]  *** Error codes and diagnostics ***
[2024-05-16 19:50:28]     "exeErrorCode": 0,
[2024-05-16 19:50:28]     "exeErrorDiag": "",
[2024-05-16 19:50:28]     "pilotErrorCode": 0,
[2024-05-16 19:50:28]     "pilotErrorDiag": "",
[2024-05-16 19:50:28]  *** Listing of results directory ***
[2024-05-16 19:50:28] total 880584
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc    467845 May 13 12:35 pilot3.tar.gz
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc      5633 May 13 12:39 queuedata.json
[2024-05-16 19:50:28] -rwx------ 1 boinc boinc     32251 May 13 12:39 runpilot2-wrapper.sh
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc       100 May 16 13:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 19:50:28] -rwxr-xr-x 1 boinc boinc      7986 May 16 13:45 run_atlas
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc       105 May 16 13:45 job.xml
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc      6457 May 16 13:46 init_data.xml
[2024-05-16 19:50:28] -rw-r--r-- 2 boinc boinc 613092017 May 16 13:46 EVNT.38776140._000190.pool.root.1
[2024-05-16 19:50:28] drwxrwx--x 2 boinc boinc      4096 May 16 13:46 shared
[2024-05-16 19:50:28] -rw-r--r-- 2 boinc boinc    479992 May 16 13:46 input.tar.gz
[2024-05-16 19:50:28] -rw-r--r-- 2 boinc boinc     17537 May 16 13:46 start_atlas.sh
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc         0 May 16 13:46 boinc_lockfile
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc      2613 May 16 13:46 pandaJob.out
[2024-05-16 19:50:28] -rw------- 1 boinc boinc       424 May 16 13:46 setup.sh.local
[2024-05-16 19:50:28] -rw------- 1 boinc boinc   1010319 May 16 13:46 agis_schedconf.cvmfs.json
[2024-05-16 19:50:28] -rw------- 1 boinc boinc   1324701 May 16 13:46 cric_ddmendpoints.json
[2024-05-16 19:50:28] drwx------ 4 boinc boinc      4096 May 16 13:46 pilot3
[2024-05-16 19:50:28] -rw------- 1 boinc boinc        95 May 16 19:49 pilot_heartbeat.json
[2024-05-16 19:50:28] -rw------- 1 boinc boinc 279262092 May 16 19:49 HITS.38776146._004750.pool.root.1
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc       532 May 16 19:49 boinc_task_state.xml
[2024-05-16 19:50:28] -rw------- 1 boinc boinc      1049 May 16 19:49 memory_monitor_summary.json
[2024-05-16 19:50:28] -rw------- 1 boinc boinc         0 May 16 19:50 agis_ddmendpoints.agis.ALL.json
[2024-05-16 19:50:28] -rw------- 1 boinc boinc    436652 May 16 19:50 log.38776146._004750.job.log.tgz.1
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc      8192 May 16 19:50 boinc_mmap_file
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc        28 May 16 19:50 wrapper_checkpoint.txt
[2024-05-16 19:50:28] -rw------- 1 boinc boinc      7765 May 16 19:50 heartbeat.json
[2024-05-16 19:50:28] -rw------- 1 boinc boinc      4345 May 16 19:50 pilotlog.txt
[2024-05-16 19:50:28] -rw------- 1 boinc boinc   2480979 May 16 19:50 log.38776146._004750.job.log.1
[2024-05-16 19:50:28] -rw------- 1 boinc boinc       357 May 16 19:50 output.list
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc       620 May 16 19:50 runtime_log
[2024-05-16 19:50:28] -rw------- 1 boinc boinc   2938880 May 16 19:50 result.tar.gz
[2024-05-16 19:50:28] -rw------- 1 boinc boinc       658 May 16 19:50 u4NODmWGiQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmfqGKDmfrYTFn.diag
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc     11410 May 16 19:50 runtime_log.err
[2024-05-16 19:50:28] -rw-r--r-- 1 boinc boinc     21358 May 16 19:50 stderr.txt
[2024-05-16 19:50:28] HITS file was successfully produced:
[2024-05-16 19:50:28] -rw------- 1 boinc boinc 279262092 May 16 19:49 shared/HITS.pool.root.1
[2024-05-16 19:50:28]  *** Contents of shared directory: ***
[2024-05-16 19:50:28] total 874816
[2024-05-16 19:50:28] -rw-r--r-- 2 boinc boinc 613092017 May 16 13:46 ATLAS.root_0
[2024-05-16 19:50:28] -rw-r--r-- 2 boinc boinc    479992 May 16 13:46 input.tar.gz
[2024-05-16 19:50:28] -rw-r--r-- 2 boinc boinc     17537 May 16 13:46 start_atlas.sh
[2024-05-16 19:50:28] -rw------- 1 boinc boinc 279262092 May 16 19:49 HITS.pool.root.1
[2024-05-16 19:50:28] -rw------- 1 boinc boinc   2938880 May 16 19:50 result.tar.gz
19:50:29 (2081144): run_atlas exited; CPU time 83794.420137
19:50:29 (2081144): called boinc_finish(0)

</stderr_txt>
]]>

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