Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:33 (1919775): wrapper (7.7.26015): starting
16:37:33 (1919775): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 16:37:33] Arguments: --nthreads 4
[2024-05-15 16:37:33] Threads: 4
[2024-05-15 16:37:33] Checking for CVMFS
[2024-05-15 16:37:33] No cvmfs_config command found, will try listing directly
[2024-05-15 16:37:33] CVMFS is ok
[2024-05-15 16:37:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 16:37:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 16:37:33] Further information can be found at the LHC@home message board.
[2024-05-15 16:37:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 16:37:33] Checking for apptainer binary...
[2024-05-15 16:37:33] which: no apptainer in ((null))
[2024-05-15 16:37:33] apptainer is not installed, using version from CVMFS
[2024-05-15 16:37:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 16:37:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2024-05-15 16:37:34] apptainer works
[2024-05-15 16:37:34] Set ATHENA_PROC_NUMBER=4
[2024-05-15 16:37:34] Set ATHENA_CORE_NUMBER=4
[2024-05-15 16:37:34] Starting ATLAS job with PandaID=6205827666
[2024-05-15 16:37:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 20:16:26]  *** The last 200 lines of the pilot log: ***
[2024-05-15 20:16:26] 2024-05-15 18:16:03,210 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 20:16:26] 2024-05-15 18:16:03,214 | INFO     | fitting pss+swap vs Time
[2024-05-15 20:16:26] 2024-05-15 18:16:03,214 | INFO     | model: linear, x: [1715783895.0, 1715783956.0, 1715784017.0, 1715784078.0, 1715784139.0, 1715784200.0, 1715784261.0, 1715784322.0, 1715784383.0, 1715784444.0, 1715
[2024-05-15 20:16:26] 2024-05-15 18:16:03,215 | INFO     | sum of square deviations: 3081657780.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,216 | INFO     | sum of deviations: 84745587912.99998
[2024-05-15 20:16:26] 2024-05-15 18:16:03,216 | INFO     | mean x: 1715790422.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,216 | INFO     | mean y: 2292361.730232558
[2024-05-15 20:16:26] 2024-05-15 18:16:03,216 | INFO     | -- intersect: -47181943665.89394
[2024-05-15 20:16:26] 2024-05-15 18:16:03,216 | INFO     | intersect: -47181943665.89394
[2024-05-15 20:16:26] 2024-05-15 18:16:03,217 | INFO     | chi2: 4.800351673091694
[2024-05-15 20:16:26] 2024-05-15 18:16:03,217 | INFO     | model: linear, x: [1715783895.0, 1715783956.0, 1715784017.0, 1715784078.0, 1715784139.0, 1715784200.0, 1715784261.0, 1715784322.0, 1715784383.0, 1715784444.0, 1715
[2024-05-15 20:16:26] 2024-05-15 18:16:03,217 | INFO     | sum of square deviations: 2871616632.5
[2024-05-15 20:16:26] 2024-05-15 18:16:03,218 | INFO     | sum of deviations: 95914926179.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,218 | INFO     | mean x: 1715790269.5
[2024-05-15 20:16:26] 2024-05-15 18:16:03,218 | INFO     | mean y: 2300287.285714286
[2024-05-15 20:16:26] 2024-05-15 18:16:03,219 | INFO     | -- intersect: -57306845778.79837
[2024-05-15 20:16:26] 2024-05-15 18:16:03,219 | INFO     | intersect: -57306845778.79837
[2024-05-15 20:16:26] 2024-05-15 18:16:03,219 | INFO     | chi2: 4.049042844363722
[2024-05-15 20:16:26] 2024-05-15 18:16:03,219 | INFO     | current chi2=4.049042844363722 (change=15.651120582256997 %)
[2024-05-15 20:16:26] 2024-05-15 18:16:03,219 | INFO     | right removable region: 209
[2024-05-15 20:16:26] 2024-05-15 18:16:03,219 | INFO     | model: linear, x: [1715784200.0, 1715784261.0, 1715784322.0, 1715784383.0, 1715784444.0, 1715784505.0, 1715784566.0, 1715784627.0, 1715784688.0, 1715784749.0, 1715
[2024-05-15 20:16:26] 2024-05-15 18:16:03,220 | INFO     | sum of square deviations: 2871616632.5
[2024-05-15 20:16:26] 2024-05-15 18:16:03,221 | INFO     | sum of deviations: 34713740218.5
[2024-05-15 20:16:26] 2024-05-15 18:16:03,221 | INFO     | mean x: 1715790574.5
[2024-05-15 20:16:26] 2024-05-15 18:16:03,221 | INFO     | mean y: 2328593.2047619047
[2024-05-15 20:16:26] 2024-05-15 18:16:03,221 | INFO     | -- intersect: -20739126794.135796
[2024-05-15 20:16:26] 2024-05-15 18:16:03,221 | INFO     | intersect: -20739126794.135796
[2024-05-15 20:16:26] 2024-05-15 18:16:03,221 | INFO     | chi2: 2.3186232619869367
[2024-05-15 20:16:26] 2024-05-15 18:16:03,221 | INFO     | current chi2=2.3186232619869367 (change=51.698887500598175 %)
[2024-05-15 20:16:26] 2024-05-15 18:16:03,222 | INFO     | model: linear, x: [1715784505.0, 1715784566.0, 1715784627.0, 1715784688.0, 1715784749.0, 1715784810.0, 1715784871.0, 1715784932.0, 1715784993.0, 1715785054.0, 1715
[2024-05-15 20:16:26] 2024-05-15 18:16:03,222 | INFO     | sum of square deviations: 2671343110.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,223 | INFO     | sum of deviations: -5191121716.000003
[2024-05-15 20:16:26] 2024-05-15 18:16:03,223 | INFO     | mean x: 1715790727.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,223 | INFO     | mean y: 2358985.0975609757
[2024-05-15 20:16:26] 2024-05-15 18:16:03,223 | INFO     | -- intersect: 3336591293.069835
[2024-05-15 20:16:26] 2024-05-15 18:16:03,223 | INFO     | intersect: 3336591293.069835
[2024-05-15 20:16:26] 2024-05-15 18:16:03,224 | INFO     | chi2: 0.8697406409916291
[2024-05-15 20:16:26] 2024-05-15 18:16:03,224 | INFO     | current chi2=0.8697406409916291 (change=62.48891938372482 %)
[2024-05-15 20:16:26] 2024-05-15 18:16:03,224 | INFO     | model: linear, x: [1715784810.0, 1715784871.0, 1715784932.0, 1715784993.0, 1715785054.0, 1715785115.0, 1715785176.0, 1715785237.0, 1715785298.0, 1715785359.0, 1715
[2024-05-15 20:16:26] 2024-05-15 18:16:03,224 | INFO     | sum of square deviations: 2480604650.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,225 | INFO     | sum of deviations: -12213465567.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,225 | INFO     | mean x: 1715790879.5
[2024-05-15 20:16:26] 2024-05-15 18:16:03,225 | INFO     | mean y: 2364542.79
[2024-05-15 20:16:26] 2024-05-15 18:16:03,225 | INFO     | -- intersect: 8450205204.116623
[2024-05-15 20:16:26] 2024-05-15 18:16:03,226 | INFO     | intersect: 8450205204.116623
[2024-05-15 20:16:26] 2024-05-15 18:16:03,226 | INFO     | chi2: 0.7882320130031228
[2024-05-15 20:16:26] 2024-05-15 18:16:03,226 | INFO     | current chi2=0.7882320130031228 (change=9.371601618566967 %)
[2024-05-15 20:16:26] 2024-05-15 18:16:03,226 | INFO     | left removable region: 30
[2024-05-15 20:16:26] 2024-05-15 18:16:03,226 | INFO     | model: linear, x: [1715785725.0, 1715785786.0, 1715785847.0, 1715785908.0, 1715785969.0, 1715786030.0, 1715786091.0, 1715786152.0, 1715786213.0, 1715786274.0, 1715
[2024-05-15 20:16:26] 2024-05-15 18:16:03,226 | INFO     | sum of square deviations: 1778377530.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,227 | INFO     | sum of deviations: 1522547129.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,227 | INFO     | mean x: 1715791154.0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,228 | INFO     | mean y: 2373782.972067039
[2024-05-15 20:16:26] 2024-05-15 18:16:03,228 | INFO     | -- intersect: -1466590400.064083
[2024-05-15 20:16:26] 2024-05-15 18:16:03,228 | INFO     | intersect: -1466590400.064083
[2024-05-15 20:16:26] 2024-05-15 18:16:03,228 | INFO     | chi2: 0.0013212887320748093
[2024-05-15 20:16:26] 2024-05-15 18:16:03,228 | INFO     | -- intersect: -1466590400.064083
[2024-05-15 20:16:26] 2024-05-15 18:16:03,228 | INFO     | current memory leak: 0.86 B/s (using 179 data points, chi2=0.00)
[2024-05-15 20:16:26] 2024-05-15 18:16:03,229 | INFO     | ..............................
[2024-05-15 20:16:26] 2024-05-15 18:16:03,230 | INFO     | . Timing measurements:
[2024-05-15 20:16:26] 2024-05-15 18:16:03,230 | INFO     | . get job = 0 s
[2024-05-15 20:16:26] 2024-05-15 18:16:03,230 | INFO     | . initial setup = 1 s
[2024-05-15 20:16:26] 2024-05-15 18:16:03,230 | INFO     | . payload setup = 6 s
[2024-05-15 20:16:26] 2024-05-15 18:16:03,230 | INFO     | . stage-in = 0 s
[2024-05-15 20:16:26] 2024-05-15 18:16:03,230 | INFO     | . payload execution = 13062 s
[2024-05-15 20:16:26] 2024-05-15 18:16:03,230 | INFO     | . stage-out = 0 s
[2024-05-15 20:16:26] 2024-05-15 18:16:03,230 | INFO     | . log creation = 0 s
[2024-05-15 20:16:26] 2024-05-15 18:16:03,230 | INFO     | ..............................
[2024-05-15 20:16:26] 2024-05-15 18:16:03,318 | INFO     | 
[2024-05-15 20:16:26] 2024-05-15 18:16:03,318 | INFO     | job summary report
[2024-05-15 20:16:26] 2024-05-15 18:16:03,318 | INFO     | --------------------------------------------------
[2024-05-15 20:16:26] 2024-05-15 18:16:03,318 | INFO     | PanDA job id: 6205827666
[2024-05-15 20:16:26] 2024-05-15 18:16:03,318 | INFO     | task id: 38776146
[2024-05-15 20:16:26] 2024-05-15 18:16:03,318 | INFO     | errors: (none)
[2024-05-15 20:16:26] 2024-05-15 18:16:03,318 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 20:16:26] 2024-05-15 18:16:03,318 | INFO     | pilot state: finished 
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | transexitcode: 0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | exeerrorcode: 0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | exeerrordiag: 
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | exitcode: 0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | exitmsg: OK
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | cpuconsumptiontime: 49131 s
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | nevents: 400
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | neventsw: 0
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | pid: 1934452
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | pgrp: 1934452
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | corecount: 4
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | event service: False
[2024-05-15 20:16:26] 2024-05-15 18:16:03,319 | INFO     | sizes: {0: 2396462, 1: 2396661, 6: 2396867, 11: 2396895, 13072: 2426851, 13073: 2426850, 13074: 2436016, 13076: 2436072, 13080: 2436242}
[2024-05-15 20:16:26] 2024-05-15 18:16:03,320 | INFO     | --------------------------------------------------
[2024-05-15 20:16:26] 2024-05-15 18:16:03,320 | INFO     | 
[2024-05-15 20:16:26] 2024-05-15 18:16:03,320 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/1
[2024-05-15 20:16:26] 2024-05-15 18:16:03,347 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,347 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,347 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,349 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 20:16:26] 2024-05-15 18:16:03,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,349 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 20:16:26] 2024-05-15 18:16:03,349 | INFO     | job 6205827666 has completed (purged errors)
[2024-05-15 20:16:26] 2024-05-15 18:16:03,349 | INFO     | overall cleanup function is called
[2024-05-15 20:16:26] 2024-05-15 18:16:04,357 | INFO     | --- collectZombieJob: --- 10, [1934452]
[2024-05-15 20:16:26] 2024-05-15 18:16:04,357 | INFO     | zombie collector waiting for pid 1934452
[2024-05-15 20:16:26] 2024-05-15 18:16:04,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 20:16:26] 2024-05-15 18:16:05,362 | INFO     | collected zombie processes
[2024-05-15 20:16:26] 2024-05-15 18:16:05,363 | INFO     | will now attempt to kill all subprocesses of pid=1934452
[2024-05-15 20:16:26] 2024-05-15 18:16:05,557 | INFO     | process IDs to be killed: [1934452] (in reverse order)
[2024-05-15 20:16:26] 2024-05-15 18:16:05,727 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 20:16:26] 2024-05-15 18:16:05,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 20:16:26] 2024-05-15 18:16:05,749 | INFO     | did not find any defunct processes belonging to 1934452
[2024-05-15 20:16:26] 2024-05-15 18:16:05,761 | INFO     | did not find any defunct processes belonging to 1934452
[2024-05-15 20:16:26] 2024-05-15 18:16:05,762 | INFO     | ready for new job
[2024-05-15 20:16:26] 2024-05-15 18:16:05,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 20:16:26] 2024-05-15 18:16:05,764 | INFO     | *************************************
[2024-05-15 20:16:26] 2024-05-15 18:16:05,764 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 20:16:26] 2024-05-15 18:16:05,764 | INFO     | *************************************
[2024-05-15 20:16:26] 2024-05-15 18:16:05,764 | INFO     | 
[2024-05-15 20:16:26] 2024-05-15 18:16:05,771 | INFO     | architecture information:
[2024-05-15 20:16:26] 2024-05-15 18:16:05,771 | INFO     | executing command: cat /etc/os-release
[2024-05-15 20:16:26] 2024-05-15 18:16:05,794 | INFO     | cat /etc/os-release:
[2024-05-15 20:16:26] NAME="CentOS Linux"
[2024-05-15 20:16:26] VERSION="7 (Core)"
[2024-05-15 20:16:26] ID="centos"
[2024-05-15 20:16:26] ID_LIKE="rhel fedora"
[2024-05-15 20:16:26] VERSION_ID="7"
[2024-05-15 20:16:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 20:16:26] ANSI_COLOR="0;31"
[2024-05-15 20:16:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 20:16:26] HOME_URL="https://www.centos.org/"
[2024-05-15 20:16:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 20:16:26] 
[2024-05-15 20:16:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 20:16:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 20:16:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 20:16:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 20:16:26] 
[2024-05-15 20:16:26] 2024-05-15 18:16:05,794 | INFO     | *************************************
[2024-05-15 20:16:26] 2024-05-15 18:16:06,297 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/1
[2024-05-15 20:16:26] 2024-05-15 18:16:06,321 | INFO     | sufficient remaining disk space (3176238415872 B)
[2024-05-15 20:16:26] 2024-05-15 18:16:06,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 20:16:26] 2024-05-15 18:16:06,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 20:16:26] 2024-05-15 18:16:06,321 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 20:16:26] 2024-05-15 18:16:06,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 20:16:26] 2024-05-15 18:16:06,322 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 20:16:26] 2024-05-15 18:16:06,323 | INFO     | aborting loop
[2024-05-15 20:16:26] 2024-05-15 18:16:06,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 20:16:26] 2024-05-15 18:16:06,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 20:16:26] 2024-05-15 18:16:06,985 | INFO     | all payload control threads have been joined
[2024-05-15 20:16:26] 2024-05-15 18:16:07,327 | INFO     | [job] retrieve thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:07,329 | INFO     | [job] job monitor thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:07,340 | INFO     | all data control threads have been joined
[2024-05-15 20:16:26] 2024-05-15 18:16:07,341 | INFO     | all job control threads have been joined
[2024-05-15 20:16:26] 2024-05-15 18:16:07,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 20:16:26] 2024-05-15 18:16:07,762 | INFO     | [payload] failed_post thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:07,850 | INFO     | [job] validate thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:07,852 | INFO     | [data] copytool_in thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:07,883 | INFO     | [payload] validate_post thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:07,991 | INFO     | [payload] control thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:08,014 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:08,209 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:08,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 20:16:26] 2024-05-15 18:16:08,346 | INFO     | [data] control thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:08,347 | INFO     | [job] control thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:08,655 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:09,334 | INFO     | [job] queue monitor thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:09,377 | INFO     | [data] copytool_out thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:09,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 20:16:26] 2024-05-15 18:16:13,559 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:17,263 | INFO     | job.realtimelogging is not enabled
[2024-05-15 20:16:26] 2024-05-15 18:16:18,268 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 20:16:26] 2024-05-15 18:16:20,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47168052806720)>', '<ExcThread(monitor, started 47168239027968)>']
[2024-05-15 20:16:26] 2024-05-15 18:16:20,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 20:16:26] 2024-05-15 18:16:20,394 | INFO     | [monitor] control thread has ended
[2024-05-15 20:16:26] 2024-05-15 18:16:25,345 | INFO     | all workflow threads have been joined
[2024-05-15 20:16:26] 2024-05-15 18:16:25,346 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 20:16:26] 2024-05-15 18:16:25,346 | INFO     | traces error code: 0
[2024-05-15 20:16:26] 2024-05-15 18:16:25,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 20:16:26] 2024-05-15 18:16:25,464 [wrapper] ==== pilot stdout END ====
[2024-05-15 20:16:26] 2024-05-15 18:16:25,467 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 20:16:26] 2024-05-15 18:16:25,469 [wrapper] pilotpid: 1924481
[2024-05-15 20:16:26] 2024-05-15 18:16:25,471 [wrapper] Pilot exit status: 0
[2024-05-15 20:16:26] 2024-05-15 18:16:25,503 [wrapper] pandaids: 6205827666
[2024-05-15 20:16:26] 2024-05-15 18:16:25,690 [wrapper] cleanup: SIGTERM to supervisor_pilot 3005781 1924482
[2024-05-15 20:16:26] 2024-05-15 18:16:25,693 [wrapper] Test setup, not cleaning
[2024-05-15 20:16:26] 2024-05-15 18:16:25,695 [wrapper] ==== wrapper stdout END ====
[2024-05-15 20:16:26] 2024-05-15 18:16:25,698 [wrapper] ==== wrapper stderr END ====
[2024-05-15 20:16:26] 2024-05-15 18:16:25,702 [wrapper] apfmon messages muted
[2024-05-15 20:16:26]  *** Error codes and diagnostics ***
[2024-05-15 20:16:26]     "exeErrorCode": 0,
[2024-05-15 20:16:26]     "exeErrorDiag": "",
[2024-05-15 20:16:26]     "pilotErrorCode": 0,
[2024-05-15 20:16:26]     "pilotErrorDiag": "",
[2024-05-15 20:16:26]  *** Listing of results directory ***
[2024-05-15 20:16:26] total 873452
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc      5633 May 13 12:35 queuedata.json
[2024-05-15 20:16:26] -rwx------ 1 boinc boinc     32251 May 13 12:35 runpilot2-wrapper.sh
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc    467845 May 13 12:35 pilot3.tar.gz
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc       100 May 15 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 20:16:26] -rwxr-xr-x 1 boinc boinc      7986 May 15 16:37 run_atlas
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc       105 May 15 16:37 job.xml
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc      6643 May 15 16:37 init_data.xml
[2024-05-15 20:16:26] -rw-r--r-- 2 boinc boinc 614885024 May 15 16:37 EVNT.38776140._000189.pool.root.1
[2024-05-15 20:16:26] -rw-r--r-- 2 boinc boinc     17537 May 15 16:37 start_atlas.sh
[2024-05-15 20:16:26] drwxrwx--x 2 boinc boinc      4096 May 15 16:37 shared
[2024-05-15 20:16:26] -rw-r--r-- 2 boinc boinc    479992 May 15 16:37 input.tar.gz
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc         0 May 15 16:37 boinc_lockfile
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc      2613 May 15 16:37 pandaJob.out
[2024-05-15 20:16:26] -rw------- 1 boinc boinc       424 May 15 16:37 setup.sh.local
[2024-05-15 20:16:26] -rw------- 1 boinc boinc   1010542 May 15 16:37 agis_schedconf.cvmfs.json
[2024-05-15 20:16:26] -rw------- 1 boinc boinc   1325758 May 15 16:37 cric_ddmendpoints.json
[2024-05-15 20:16:26] drwx------ 4 boinc boinc      4096 May 15 16:37 pilot3
[2024-05-15 20:16:26] -rw------- 1 boinc boinc 272532401 May 15 20:15 HITS.38776146._004732.pool.root.1
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc       531 May 15 20:15 boinc_task_state.xml
[2024-05-15 20:16:26] -rw------- 1 boinc boinc        95 May 15 20:15 pilot_heartbeat.json
[2024-05-15 20:16:26] -rw------- 1 boinc boinc      1044 May 15 20:15 memory_monitor_summary.json
[2024-05-15 20:16:26] -rw------- 1 boinc boinc         0 May 15 20:15 agis_ddmendpoints.agis.ALL.json
[2024-05-15 20:16:26] -rw------- 1 boinc boinc    350600 May 15 20:15 log.38776146._004732.job.log.tgz.1
[2024-05-15 20:16:26] -rw------- 1 boinc boinc      7722 May 15 20:16 heartbeat.json
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc      8192 May 15 20:16 boinc_mmap_file
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc        28 May 15 20:16 wrapper_checkpoint.txt
[2024-05-15 20:16:26] -rw------- 1 boinc boinc      4417 May 15 20:16 pilotlog.txt
[2024-05-15 20:16:26] -rw------- 1 boinc boinc   1385860 May 15 20:16 log.38776146._004732.job.log.1
[2024-05-15 20:16:26] -rw------- 1 boinc boinc       357 May 15 20:16 output.list
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc       620 May 15 20:16 runtime_log
[2024-05-15 20:16:26] -rw------- 1 boinc boinc   1751040 May 15 20:16 result.tar.gz
[2024-05-15 20:16:26] -rw------- 1 boinc boinc       658 May 15 20:16 ZGoMDmLDiQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmSOKKDmm5sFBo.diag
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc     11410 May 15 20:16 runtime_log.err
[2024-05-15 20:16:26] -rw-r--r-- 1 boinc boinc     21336 May 15 20:16 stderr.txt
[2024-05-15 20:16:26] HITS file was successfully produced:
[2024-05-15 20:16:26] -rw------- 1 boinc boinc 272532401 May 15 20:15 shared/HITS.pool.root.1
[2024-05-15 20:16:26]  *** Contents of shared directory: ***
[2024-05-15 20:16:26] total 868836
[2024-05-15 20:16:26] -rw-r--r-- 2 boinc boinc 614885024 May 15 16:37 ATLAS.root_0
[2024-05-15 20:16:26] -rw-r--r-- 2 boinc boinc     17537 May 15 16:37 start_atlas.sh
[2024-05-15 20:16:26] -rw-r--r-- 2 boinc boinc    479992 May 15 16:37 input.tar.gz
[2024-05-15 20:16:26] -rw------- 1 boinc boinc 272532401 May 15 20:15 HITS.pool.root.1
[2024-05-15 20:16:26] -rw------- 1 boinc boinc   1751040 May 15 20:16 result.tar.gz
20:16:27 (1919775): run_atlas exited; CPU time 48870.825496
20:16:27 (1919775): called boinc_finish(0)

</stderr_txt>
]]>

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