Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:29:15 (1334648): wrapper (7.7.26015): starting
08:29:15 (1334648): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 08:29:15] Arguments: --nthreads 4
[2024-05-16 08:29:15] Threads: 4
[2024-05-16 08:29:15] Checking for CVMFS
[2024-05-16 08:29:15] No cvmfs_config command found, will try listing directly
[2024-05-16 08:29:15] CVMFS is ok
[2024-05-16 08:29:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 08:29:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 08:29:15] Further information can be found at the LHC@home message board.
[2024-05-16 08:29:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 08:29:15] Checking for apptainer binary...
[2024-05-16 08:29:15] which: no apptainer in ((null))
[2024-05-16 08:29:15] apptainer is not installed, using version from CVMFS
[2024-05-16 08:29:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 08:29:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-05-16 08:29:16] apptainer works
[2024-05-16 08:29:16] Set ATHENA_PROC_NUMBER=4
[2024-05-16 08:29:16] Set ATHENA_CORE_NUMBER=4
[2024-05-16 08:29:16] Starting ATLAS job with PandaID=6205827187
[2024-05-16 08:29:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 14:47:01]  *** The last 200 lines of the pilot log: ***
[2024-05-16 14:47:01] 2024-05-16 12:46:38,991 | INFO     | model: linear, x: [1715840989.0, 1715841050.0, 1715841111.0, 1715841172.0, 1715841233.0, 1715841294.0, 1715841355.0, 1715841416.0, 1715841477.0, 1715841538.0, 1715
[2024-05-16 14:47:01] 2024-05-16 12:46:38,991 | INFO     | sum of square deviations: 15834231770.0
[2024-05-16 14:47:01] 2024-05-16 12:46:38,993 | INFO     | sum of deviations: 119905829862.00002
[2024-05-16 14:47:01] 2024-05-16 12:46:38,993 | INFO     | mean x: 1715852274.0
[2024-05-16 14:47:01] 2024-05-16 12:46:38,993 | INFO     | mean y: 2316380.0080862534
[2024-05-16 14:47:01] 2024-05-16 12:46:38,993 | INFO     | -- intersect: -12991095224.865108
[2024-05-16 14:47:01] 2024-05-16 12:46:38,994 | INFO     | intersect: -12991095224.865108
[2024-05-16 14:47:01] 2024-05-16 12:46:38,994 | INFO     | chi2: 4.765308104793866
[2024-05-16 14:47:01] 2024-05-16 12:46:38,994 | INFO     | model: linear, x: [1715840989.0, 1715841050.0, 1715841111.0, 1715841172.0, 1715841233.0, 1715841294.0, 1715841355.0, 1715841416.0, 1715841477.0, 1715841538.0, 1715
[2024-05-16 14:47:01] 2024-05-16 12:46:38,994 | INFO     | sum of square deviations: 15202619927.5
[2024-05-16 14:47:01] 2024-05-16 12:46:38,996 | INFO     | sum of deviations: 142148656239.99997
[2024-05-16 14:47:01] 2024-05-16 12:46:38,996 | INFO     | mean x: 1715852121.5
[2024-05-16 14:47:01] 2024-05-16 12:46:38,996 | INFO     | mean y: 2321687.295081967
[2024-05-16 14:47:01] 2024-05-16 12:46:38,997 | INFO     | -- intersect: -16041365160.165781
[2024-05-16 14:47:01] 2024-05-16 12:46:38,997 | INFO     | intersect: -16041365160.165781
[2024-05-16 14:47:01] 2024-05-16 12:46:38,997 | INFO     | chi2: 3.9540760994946598
[2024-05-16 14:47:01] 2024-05-16 12:46:38,997 | INFO     | current chi2=3.9540760994946598 (change=17.023705234990214 %)
[2024-05-16 14:47:01] 2024-05-16 12:46:38,997 | INFO     | right removable region: 365
[2024-05-16 14:47:01] 2024-05-16 12:46:38,997 | INFO     | model: linear, x: [1715841294.0, 1715841355.0, 1715841416.0, 1715841477.0, 1715841538.0, 1715841599.0, 1715841660.0, 1715841721.0, 1715841782.0, 1715841843.0, 1715
[2024-05-16 14:47:01] 2024-05-16 12:46:38,998 | INFO     | sum of square deviations: 15202619927.5
[2024-05-16 14:47:01] 2024-05-16 12:46:39,000 | INFO     | sum of deviations: 33630483308.50001
[2024-05-16 14:47:01] 2024-05-16 12:46:39,000 | INFO     | mean x: 1715852426.5
[2024-05-16 14:47:01] 2024-05-16 12:46:39,000 | INFO     | mean y: 2337175.2213114756
[2024-05-16 14:47:01] 2024-05-16 12:46:39,000 | INFO     | -- intersect: -3793386631.8887434
[2024-05-16 14:47:01] 2024-05-16 12:46:39,000 | INFO     | intersect: -3793386631.8887434
[2024-05-16 14:47:01] 2024-05-16 12:46:39,000 | INFO     | chi2: 2.3378123386296426
[2024-05-16 14:47:01] 2024-05-16 12:46:39,000 | INFO     | current chi2=2.3378123386296426 (change=50.941003452057586 %)
[2024-05-16 14:47:01] 2024-05-16 12:46:39,001 | INFO     | model: linear, x: [1715841599.0, 1715841660.0, 1715841721.0, 1715841782.0, 1715841843.0, 1715841904.0, 1715841965.0, 1715842026.0, 1715842087.0, 1715842148.0, 1715
[2024-05-16 14:47:01] 2024-05-16 12:46:39,001 | INFO     | sum of square deviations: 14588031660.0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,003 | INFO     | sum of deviations: -33834742937.0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,003 | INFO     | mean x: 1715852579.0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,003 | INFO     | mean y: 2353915.675900277
[2024-05-16 14:47:01] 2024-05-16 12:46:39,003 | INFO     | -- intersect: 3982015619.2791324
[2024-05-16 14:47:01] 2024-05-16 12:46:39,003 | INFO     | intersect: 3982015619.2791324
[2024-05-16 14:47:01] 2024-05-16 12:46:39,003 | INFO     | chi2: 0.9701814342826106
[2024-05-16 14:47:01] 2024-05-16 12:46:39,004 | INFO     | current chi2=0.9701814342826106 (change=58.50045710464072 %)
[2024-05-16 14:47:01] 2024-05-16 12:46:39,004 | INFO     | model: linear, x: [1715841904.0, 1715841965.0, 1715842026.0, 1715842087.0, 1715842148.0, 1715842209.0, 1715842270.0, 1715842331.0, 1715842392.0, 1715842453.0, 1715
[2024-05-16 14:47:01] 2024-05-16 12:46:39,004 | INFO     | sum of square deviations: 13990234405.0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,006 | INFO     | sum of deviations: -42671265126.5
[2024-05-16 14:47:01] 2024-05-16 12:46:39,006 | INFO     | mean x: 1715852731.5
[2024-05-16 14:47:01] 2024-05-16 12:46:39,006 | INFO     | mean y: 2356146.536516854
[2024-05-16 14:47:01] 2024-05-16 12:46:39,006 | INFO     | -- intersect: 5235835779.85119
[2024-05-16 14:47:01] 2024-05-16 12:46:39,006 | INFO     | intersect: 5235835779.85119
[2024-05-16 14:47:01] 2024-05-16 12:46:39,007 | INFO     | chi2: 0.898069231894637
[2024-05-16 14:47:01] 2024-05-16 12:46:39,007 | INFO     | current chi2=0.898069231894637 (change=7.432857385206107 %)
[2024-05-16 14:47:01] 2024-05-16 12:46:39,007 | INFO     | left removable region: 30
[2024-05-16 14:47:01] 2024-05-16 12:46:39,007 | INFO     | model: linear, x: [1715842819.0, 1715842880.0, 1715842941.0, 1715843002.0, 1715843063.0, 1715843124.0, 1715843185.0, 1715843246.0, 1715843307.0, 1715843368.0, 1715
[2024-05-16 14:47:01] 2024-05-16 12:46:39,007 | INFO     | sum of square deviations: 11657595320.0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,009 | INFO     | sum of deviations: -5636483692.000002
[2024-05-16 14:47:01] 2024-05-16 12:46:39,009 | INFO     | mean x: 1715853006.0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,009 | INFO     | mean y: 2358468.7373134326
[2024-05-16 14:47:01] 2024-05-16 12:46:39,009 | INFO     | -- intersect: 831978748.1096618
[2024-05-16 14:47:01] 2024-05-16 12:46:39,009 | INFO     | intersect: 831978748.1096618
[2024-05-16 14:47:01] 2024-05-16 12:46:39,010 | INFO     | chi2: 0.04108857738097477
[2024-05-16 14:47:01] 2024-05-16 12:46:39,010 | INFO     | -- intersect: 831978748.1096618
[2024-05-16 14:47:01] 2024-05-16 12:46:39,010 | INFO     | current memory leak: -0.48 B/s (using 335 data points, chi2=0.04)
[2024-05-16 14:47:01] 2024-05-16 12:46:39,010 | INFO     | ..............................
[2024-05-16 14:47:01] 2024-05-16 12:46:39,010 | INFO     | . Timing measurements:
[2024-05-16 14:47:01] 2024-05-16 12:46:39,010 | INFO     | . get job = 0 s
[2024-05-16 14:47:01] 2024-05-16 12:46:39,010 | INFO     | . initial setup = 1 s
[2024-05-16 14:47:01] 2024-05-16 12:46:39,011 | INFO     | . payload setup = 5 s
[2024-05-16 14:47:01] 2024-05-16 12:46:39,011 | INFO     | . stage-in = 0 s
[2024-05-16 14:47:01] 2024-05-16 12:46:39,011 | INFO     | . payload execution = 22605 s
[2024-05-16 14:47:01] 2024-05-16 12:46:39,011 | INFO     | . stage-out = 0 s
[2024-05-16 14:47:01] 2024-05-16 12:46:39,011 | INFO     | . log creation = 0 s
[2024-05-16 14:47:01] 2024-05-16 12:46:39,011 | INFO     | ..............................
[2024-05-16 14:47:01] 2024-05-16 12:46:39,071 | INFO     | 
[2024-05-16 14:47:01] 2024-05-16 12:46:39,072 | INFO     | job summary report
[2024-05-16 14:47:01] 2024-05-16 12:46:39,076 | WARNING  | process 1345712 is no longer using CPU - aborting
[2024-05-16 14:47:01] 2024-05-16 12:46:39,076 | INFO     | --------------------------------------------------
[2024-05-16 14:47:01] 2024-05-16 12:46:39,076 | INFO     | aborting job monitoring since job object (job id=6205827187) has expired
[2024-05-16 14:47:01] 2024-05-16 12:46:39,076 | INFO     | PanDA job id: 6205827187
[2024-05-16 14:47:01] 2024-05-16 12:46:39,077 | INFO     | task id: 38776146
[2024-05-16 14:47:01] 2024-05-16 12:46:39,077 | INFO     | errors: (none)
[2024-05-16 14:47:01] 2024-05-16 12:46:39,077 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 14:47:01] 2024-05-16 12:46:39,077 | INFO     | pilot state: finished 
[2024-05-16 14:47:01] 2024-05-16 12:46:39,077 | INFO     | transexitcode: 0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,077 | INFO     | exeerrorcode: 0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,078 | INFO     | exeerrordiag: 
[2024-05-16 14:47:01] 2024-05-16 12:46:39,078 | INFO     | exitcode: 0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,078 | INFO     | exitmsg: OK
[2024-05-16 14:47:01] 2024-05-16 12:46:39,078 | INFO     | cpuconsumptiontime: 87511 s
[2024-05-16 14:47:01] 2024-05-16 12:46:39,078 | INFO     | nevents: 400
[2024-05-16 14:47:01] 2024-05-16 12:46:39,078 | INFO     | neventsw: 0
[2024-05-16 14:47:01] 2024-05-16 12:46:39,079 | INFO     | pid: 1345712
[2024-05-16 14:47:01] 2024-05-16 12:46:39,079 | INFO     | pgrp: 1345712
[2024-05-16 14:47:01] 2024-05-16 12:46:39,079 | INFO     | corecount: 4
[2024-05-16 14:47:01] 2024-05-16 12:46:39,079 | INFO     | event service: False
[2024-05-16 14:47:01] 2024-05-16 12:46:39,079 | INFO     | sizes: {0: 2392015, 1: 2392214, 4: 2392420, 11: 2392448, 22613: 2426986, 22614: 2436152, 22619: 2436266}
[2024-05-16 14:47:01] 2024-05-16 12:46:39,079 | INFO     | --------------------------------------------------
[2024-05-16 14:47:01] 2024-05-16 12:46:39,080 | INFO     | 
[2024-05-16 14:47:01] 2024-05-16 12:46:39,080 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-05-16 14:47:01] 2024-05-16 12:46:39,095 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,097 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 14:47:01] 2024-05-16 12:46:39,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,097 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 14:47:01] 2024-05-16 12:46:39,097 | INFO     | job 6205827187 has completed (purged errors)
[2024-05-16 14:47:01] 2024-05-16 12:46:39,097 | INFO     | overall cleanup function is called
[2024-05-16 14:47:01] 2024-05-16 12:46:40,104 | INFO     | --- collectZombieJob: --- 10, [1345712]
[2024-05-16 14:47:01] 2024-05-16 12:46:40,104 | INFO     | zombie collector waiting for pid 1345712
[2024-05-16 14:47:01] 2024-05-16 12:46:40,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 14:47:01] 2024-05-16 12:46:41,109 | INFO     | collected zombie processes
[2024-05-16 14:47:01] 2024-05-16 12:46:41,109 | INFO     | will now attempt to kill all subprocesses of pid=1345712
[2024-05-16 14:47:01] 2024-05-16 12:46:41,210 | INFO     | process IDs to be killed: [1345712] (in reverse order)
[2024-05-16 14:47:01] 2024-05-16 12:46:41,311 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 14:47:01] 2024-05-16 12:46:41,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 14:47:01] 2024-05-16 12:46:41,317 | INFO     | did not find any defunct processes belonging to 1345712
[2024-05-16 14:47:01] 2024-05-16 12:46:41,322 | INFO     | did not find any defunct processes belonging to 1345712
[2024-05-16 14:47:01] 2024-05-16 12:46:41,322 | INFO     | ready for new job
[2024-05-16 14:47:01] 2024-05-16 12:46:41,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 14:47:01] 2024-05-16 12:46:41,324 | INFO     | *************************************
[2024-05-16 14:47:01] 2024-05-16 12:46:41,324 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 14:47:01] 2024-05-16 12:46:41,324 | INFO     | *************************************
[2024-05-16 14:47:01] 2024-05-16 12:46:41,324 | INFO     | 
[2024-05-16 14:47:01] 2024-05-16 12:46:41,326 | INFO     | architecture information:
[2024-05-16 14:47:01] 2024-05-16 12:46:41,326 | INFO     | executing command: cat /etc/os-release
[2024-05-16 14:47:01] 2024-05-16 12:46:41,337 | INFO     | cat /etc/os-release:
[2024-05-16 14:47:01] NAME="CentOS Linux"
[2024-05-16 14:47:01] VERSION="7 (Core)"
[2024-05-16 14:47:01] ID="centos"
[2024-05-16 14:47:01] ID_LIKE="rhel fedora"
[2024-05-16 14:47:01] VERSION_ID="7"
[2024-05-16 14:47:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 14:47:01] ANSI_COLOR="0;31"
[2024-05-16 14:47:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 14:47:01] HOME_URL="https://www.centos.org/"
[2024-05-16 14:47:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 14:47:01] 
[2024-05-16 14:47:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 14:47:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 14:47:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 14:47:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 14:47:01] 
[2024-05-16 14:47:01] 2024-05-16 12:46:41,337 | INFO     | *************************************
[2024-05-16 14:47:01] 2024-05-16 12:46:41,840 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-05-16 14:47:01] 2024-05-16 12:46:41,853 | INFO     | sufficient remaining disk space (1610522558464 B)
[2024-05-16 14:47:01] 2024-05-16 12:46:41,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 14:47:01] 2024-05-16 12:46:41,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 14:47:01] 2024-05-16 12:46:41,854 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 14:47:01] 2024-05-16 12:46:41,854 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 14:47:01] 2024-05-16 12:46:41,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 14:47:01] 2024-05-16 12:46:41,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 14:47:01] 2024-05-16 12:46:41,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 14:47:01] 2024-05-16 12:46:41,935 | INFO     | all data control threads have been joined
[2024-05-16 14:47:01] 2024-05-16 12:46:42,449 | INFO     | all payload control threads have been joined
[2024-05-16 14:47:01] 2024-05-16 12:46:42,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 14:47:01] 2024-05-16 12:46:42,584 | INFO     | aborting loop
[2024-05-16 14:47:01] 2024-05-16 12:46:42,859 | INFO     | [job] retrieve thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:42,940 | INFO     | [data] control thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:43,051 | INFO     | all job control threads have been joined
[2024-05-16 14:47:01] 2024-05-16 12:46:43,330 | INFO     | [payload] validate_post thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:43,455 | INFO     | [payload] control thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:43,589 | INFO     | [job] job monitor thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:43,771 | INFO     | [data] copytool_in thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:43,879 | INFO     | [job] validate thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:43,916 | INFO     | [data] copytool_out thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:43,976 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:44,057 | INFO     | [job] control thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:44,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 14:47:01] 2024-05-16 12:46:44,103 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:44,164 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:44,344 | INFO     | [payload] failed_post thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:44,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 14:47:01] 2024-05-16 12:46:45,086 | INFO     | [job] queue monitor thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:48,511 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:52,420 | INFO     | job.realtimelogging is not enabled
[2024-05-16 14:47:01] 2024-05-16 12:46:53,425 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 14:47:01] 2024-05-16 12:46:55,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47182994977856)>', '<ExcThread(monitor, started 47183166228224)>']
[2024-05-16 14:47:01] 2024-05-16 12:46:55,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 14:47:01] 2024-05-16 12:46:55,925 | INFO     | [monitor] control thread has ended
[2024-05-16 14:47:01] 2024-05-16 12:47:00,324 | INFO     | all workflow threads have been joined
[2024-05-16 14:47:01] 2024-05-16 12:47:00,324 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 14:47:01] 2024-05-16 12:47:00,324 | INFO     | traces error code: 0
[2024-05-16 14:47:01] 2024-05-16 12:47:00,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 14:47:01] 2024-05-16 12:47:00,402 [wrapper] ==== pilot stdout END ====
[2024-05-16 14:47:01] 2024-05-16 12:47:00,404 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 14:47:01] 2024-05-16 12:47:00,405 [wrapper] pilotpid: 1338826
[2024-05-16 14:47:01] 2024-05-16 12:47:00,407 [wrapper] Pilot exit status: 0
[2024-05-16 14:47:01] 2024-05-16 12:47:00,415 [wrapper] pandaids: 6205827187
[2024-05-16 14:47:01] 2024-05-16 12:47:00,457 [wrapper] cleanup: SIGTERM to supervisor_pilot 1943599 1338827
[2024-05-16 14:47:01] 2024-05-16 12:47:00,459 [wrapper] Test setup, not cleaning
[2024-05-16 14:47:01] 2024-05-16 12:47:00,461 [wrapper] ==== wrapper stdout END ====
[2024-05-16 14:47:01] 2024-05-16 12:47:00,463 [wrapper] ==== wrapper stderr END ====
[2024-05-16 14:47:01] 2024-05-16 12:47:00,471 [wrapper] apfmon messages muted
[2024-05-16 14:47:01]  *** Error codes and diagnostics ***
[2024-05-16 14:47:01]     "exeErrorCode": 0,
[2024-05-16 14:47:01]     "exeErrorDiag": "",
[2024-05-16 14:47:01]     "pilotErrorCode": 0,
[2024-05-16 14:47:01]     "pilotErrorDiag": "",
[2024-05-16 14:47:01]  *** Listing of results directory ***
[2024-05-16 14:47:01] total 880700
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc    467845 May 13 12:02 pilot3.tar.gz
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc      5633 May 13 12:27 queuedata.json
[2024-05-16 14:47:01] -rwx------ 1 boinc boinc     32251 May 13 12:27 runpilot2-wrapper.sh
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc       100 May 16 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 14:47:01] -rwxr-xr-x 1 boinc boinc      7986 May 16 08:29 run_atlas
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc       105 May 16 08:29 job.xml
[2024-05-16 14:47:01] -rw-r--r-- 2 boinc boinc 615109806 May 16 08:29 EVNT.38776140._000182.pool.root.1
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc      6457 May 16 08:29 init_data.xml
[2024-05-16 14:47:01] -rw-r--r-- 2 boinc boinc     17537 May 16 08:29 start_atlas.sh
[2024-05-16 14:47:01] drwxrwx--x 2 boinc boinc      4096 May 16 08:29 shared
[2024-05-16 14:47:01] -rw-r--r-- 2 boinc boinc    479993 May 16 08:29 input.tar.gz
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc         0 May 16 08:29 boinc_lockfile
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc      2614 May 16 08:29 pandaJob.out
[2024-05-16 14:47:01] -rw------- 1 boinc boinc       424 May 16 08:29 setup.sh.local
[2024-05-16 14:47:01] -rw------- 1 boinc boinc   1010635 May 16 08:29 agis_schedconf.cvmfs.json
[2024-05-16 14:47:01] -rw------- 1 boinc boinc   1324701 May 16 08:29 cric_ddmendpoints.json
[2024-05-16 14:47:01] drwx------ 4 boinc boinc      4096 May 16 08:29 pilot3
[2024-05-16 14:47:01] -rw------- 1 boinc boinc 277183505 May 16 14:45 HITS.38776146._004556.pool.root.1
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc       531 May 16 14:46 boinc_task_state.xml
[2024-05-16 14:47:01] -rw------- 1 boinc boinc      1046 May 16 14:46 memory_monitor_summary.json
[2024-05-16 14:47:01] -rw------- 1 boinc boinc         0 May 16 14:46 agis_ddmendpoints.agis.ALL.json
[2024-05-16 14:47:01] -rw------- 1 boinc boinc    455654 May 16 14:46 log.38776146._004556.job.log.tgz.1
[2024-05-16 14:47:01] -rw------- 1 boinc boinc        95 May 16 14:46 pilot_heartbeat.json
[2024-05-16 14:47:01] -rw------- 1 boinc boinc      7766 May 16 14:46 heartbeat.json
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc        28 May 16 14:46 wrapper_checkpoint.txt
[2024-05-16 14:47:01] -rw------- 1 boinc boinc      4417 May 16 14:47 pilotlog.txt
[2024-05-16 14:47:01] -rw------- 1 boinc boinc   2551566 May 16 14:47 log.38776146._004556.job.log.1
[2024-05-16 14:47:01] -rw------- 1 boinc boinc       357 May 16 14:47 output.list
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc       620 May 16 14:47 runtime_log
[2024-05-16 14:47:01] -rw------- 1 boinc boinc   3031040 May 16 14:47 result.tar.gz
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc     11410 May 16 14:47 runtime_log.err
[2024-05-16 14:47:01] -rw------- 1 boinc boinc       658 May 16 14:47 DtELDmX5hQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmFMKKDmNA6a5m.diag
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc      8192 May 16 14:47 boinc_mmap_file
[2024-05-16 14:47:01] -rw-r--r-- 1 boinc boinc     21386 May 16 14:47 stderr.txt
[2024-05-16 14:47:01] HITS file was successfully produced:
[2024-05-16 14:47:01] -rw------- 1 boinc boinc 277183505 May 16 14:45 shared/HITS.pool.root.1
[2024-05-16 14:47:01]  *** Contents of shared directory: ***
[2024-05-16 14:47:01] total 874844
[2024-05-16 14:47:01] -rw-r--r-- 2 boinc boinc 615109806 May 16 08:29 ATLAS.root_0
[2024-05-16 14:47:01] -rw-r--r-- 2 boinc boinc     17537 May 16 08:29 start_atlas.sh
[2024-05-16 14:47:01] -rw-r--r-- 2 boinc boinc    479993 May 16 08:29 input.tar.gz
[2024-05-16 14:47:01] -rw------- 1 boinc boinc 277183505 May 16 14:45 HITS.pool.root.1
[2024-05-16 14:47:01] -rw------- 1 boinc boinc   3031040 May 16 14:47 result.tar.gz
14:47:03 (1334648): run_atlas exited; CPU time 87121.255911
14:47:03 (1334648): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN