Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:48:08 (3183425): wrapper (7.7.26015): starting
01:48:08 (3183425): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 01:48:08] Arguments: --nthreads 4
[2024-05-16 01:48:08] Threads: 4
[2024-05-16 01:48:08] Checking for CVMFS
[2024-05-16 01:48:08] No cvmfs_config command found, will try listing directly
[2024-05-16 01:48:08] CVMFS is ok
[2024-05-16 01:48:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 01:48:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 01:48:08] Further information can be found at the LHC@home message board.
[2024-05-16 01:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 01:48:08] Checking for apptainer binary...
[2024-05-16 01:48:08] which: no apptainer in ((null))
[2024-05-16 01:48:08] apptainer is not installed, using version from CVMFS
[2024-05-16 01:48:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 01:48:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-16 01:48:09] apptainer works
[2024-05-16 01:48:09] Set ATHENA_PROC_NUMBER=4
[2024-05-16 01:48:09] Set ATHENA_CORE_NUMBER=4
[2024-05-16 01:48:09] Starting ATLAS job with PandaID=6205826378
[2024-05-16 01:48:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 06:17:55]  *** The last 200 lines of the pilot log: ***
[2024-05-16 06:17:55] 2024-05-16 04:17:36,774 | WARNING  | GPU info not found in prmon json
[2024-05-16 06:17:55] 2024-05-16 04:17:36,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 06:17:55] 2024-05-16 04:17:36,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 06:17:55] 2024-05-16 04:17:36,780 | INFO     | fitting pss+swap vs Time
[2024-05-16 06:17:55] 2024-05-16 04:17:36,780 | INFO     | model: linear, x: [1715816927.0, 1715816988.0, 1715817049.0, 1715817110.0, 1715817171.0, 1715817232.0, 1715817293.0, 1715817354.0, 1715817415.0, 1715817476.0, 1715
[2024-05-16 06:17:55] 2024-05-16 04:17:36,780 | INFO     | sum of square deviations: 5770452380.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,782 | INFO     | sum of deviations: 109794314434.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,782 | INFO     | mean x: 1715824979.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,782 | INFO     | mean y: 2299328.5056603774
[2024-05-16 06:17:55] 2024-05-16 04:17:36,782 | INFO     | -- intersect: -32644677867.073837
[2024-05-16 06:17:55] 2024-05-16 04:17:36,782 | INFO     | intersect: -32644677867.073837
[2024-05-16 06:17:55] 2024-05-16 04:17:36,783 | INFO     | chi2: 4.900304096726854
[2024-05-16 06:17:55] 2024-05-16 04:17:36,786 | INFO     | model: linear, x: [1715816927.0, 1715816988.0, 1715817049.0, 1715817110.0, 1715817171.0, 1715817232.0, 1715817293.0, 1715817354.0, 1715817415.0, 1715817476.0, 1715
[2024-05-16 06:17:55] 2024-05-16 04:17:36,786 | INFO     | sum of square deviations: 5449944045.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,788 | INFO     | sum of deviations: 124329067199.5
[2024-05-16 06:17:55] 2024-05-16 04:17:36,789 | INFO     | mean x: 1715824826.5
[2024-05-16 06:17:55] 2024-05-16 04:17:36,789 | INFO     | mean y: 2306120.7576923077
[2024-05-16 06:17:55] 2024-05-16 04:17:36,789 | INFO     | -- intersect: -39140646246.286095
[2024-05-16 06:17:55] 2024-05-16 04:17:36,789 | INFO     | intersect: -39140646246.286095
[2024-05-16 06:17:55] 2024-05-16 04:17:36,789 | INFO     | chi2: 4.1116989980733925
[2024-05-16 06:17:55] 2024-05-16 04:17:36,789 | INFO     | current chi2=4.1116989980733925 (change=16.092982865700286 %)
[2024-05-16 06:17:55] 2024-05-16 04:17:36,789 | INFO     | right removable region: 259
[2024-05-16 06:17:55] 2024-05-16 04:17:36,790 | INFO     | model: linear, x: [1715817232.0, 1715817293.0, 1715817354.0, 1715817415.0, 1715817476.0, 1715817537.0, 1715817598.0, 1715817659.0, 1715817720.0, 1715817781.0, 1715
[2024-05-16 06:17:55] 2024-05-16 04:17:36,790 | INFO     | sum of square deviations: 5449944045.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,792 | INFO     | sum of deviations: 47378110130.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,792 | INFO     | mean x: 1715825131.5
[2024-05-16 06:17:55] 2024-05-16 04:17:36,792 | INFO     | mean y: 2328963.7769230767
[2024-05-16 06:17:55] 2024-05-16 04:17:36,792 | INFO     | -- intersect: -14913888775.854702
[2024-05-16 06:17:55] 2024-05-16 04:17:36,792 | INFO     | intersect: -14913888775.854702
[2024-05-16 06:17:55] 2024-05-16 04:17:36,793 | INFO     | chi2: 2.3931658713220525
[2024-05-16 06:17:55] 2024-05-16 04:17:36,793 | INFO     | current chi2=2.3931658713220525 (change=51.162911034020084 %)
[2024-05-16 06:17:55] 2024-05-16 04:17:36,793 | INFO     | model: linear, x: [1715817537.0, 1715817598.0, 1715817659.0, 1715817720.0, 1715817781.0, 1715817842.0, 1715817903.0, 1715817964.0, 1715818025.0, 1715818086.0, 1715
[2024-05-16 06:17:55] 2024-05-16 04:17:36,793 | INFO     | sum of square deviations: 5141528960.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,795 | INFO     | sum of deviations: -3007160981.000004
[2024-05-16 06:17:55] 2024-05-16 04:17:36,795 | INFO     | mean x: 1715825284.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,795 | INFO     | mean y: 2353878.7529411763
[2024-05-16 06:17:55] 2024-05-16 04:17:36,795 | INFO     | -- intersect: 1005900272.131235
[2024-05-16 06:17:55] 2024-05-16 04:17:36,795 | INFO     | intersect: 1005900272.131235
[2024-05-16 06:17:55] 2024-05-16 04:17:36,796 | INFO     | chi2: 0.8961355833014493
[2024-05-16 06:17:55] 2024-05-16 04:17:36,796 | INFO     | current chi2=0.8961355833014493 (change=62.55438897737587 %)
[2024-05-16 06:17:55] 2024-05-16 04:17:36,796 | INFO     | model: linear, x: [1715817842.0, 1715817903.0, 1715817964.0, 1715818025.0, 1715818086.0, 1715818147.0, 1715818208.0, 1715818269.0, 1715818330.0, 1715818391.0, 1715
[2024-05-16 06:17:55] 2024-05-16 04:17:36,797 | INFO     | sum of square deviations: 4844974562.5
[2024-05-16 06:17:55] 2024-05-16 04:17:36,798 | INFO     | sum of deviations: -10270525561.5
[2024-05-16 06:17:55] 2024-05-16 04:17:36,798 | INFO     | mean x: 1715825436.5
[2024-05-16 06:17:55] 2024-05-16 04:17:36,799 | INFO     | mean y: 2357573.092
[2024-05-16 06:17:55] 2024-05-16 04:17:36,799 | INFO     | -- intersect: 3639616918.2787366
[2024-05-16 06:17:55] 2024-05-16 04:17:36,799 | INFO     | intersect: 3639616918.2787366
[2024-05-16 06:17:55] 2024-05-16 04:17:36,799 | INFO     | chi2: 0.8252980613584818
[2024-05-16 06:17:55] 2024-05-16 04:17:36,799 | INFO     | current chi2=0.8252980613584818 (change=7.904777275107771 %)
[2024-05-16 06:17:55] 2024-05-16 04:17:36,799 | INFO     | left removable region: 30
[2024-05-16 06:17:55] 2024-05-16 04:17:36,800 | INFO     | model: linear, x: [1715818757.0, 1715818818.0, 1715818879.0, 1715818940.0, 1715819001.0, 1715819062.0, 1715819123.0, 1715819184.0, 1715819245.0, 1715819306.0, 1715
[2024-05-16 06:17:55] 2024-05-16 04:17:36,800 | INFO     | sum of square deviations: 3723716330.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,801 | INFO     | sum of deviations: 6501650046.9999895
[2024-05-16 06:17:55] 2024-05-16 04:17:36,802 | INFO     | mean x: 1715825711.0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,802 | INFO     | mean y: 2365385.5152838426
[2024-05-16 06:17:55] 2024-05-16 04:17:36,802 | INFO     | -- intersect: -2993485352.2789507
[2024-05-16 06:17:55] 2024-05-16 04:17:36,802 | INFO     | intersect: -2993485352.2789507
[2024-05-16 06:17:55] 2024-05-16 04:17:36,802 | INFO     | chi2: 0.0004914827589188068
[2024-05-16 06:17:55] 2024-05-16 04:17:36,802 | INFO     | -- intersect: -2993485352.2789507
[2024-05-16 06:17:55] 2024-05-16 04:17:36,802 | INFO     | current memory leak: 1.75 B/s (using 229 data points, chi2=0.00)
[2024-05-16 06:17:55] 2024-05-16 04:17:36,803 | INFO     | ..............................
[2024-05-16 06:17:55] 2024-05-16 04:17:36,803 | INFO     | . Timing measurements:
[2024-05-16 06:17:55] 2024-05-16 04:17:36,803 | INFO     | . get job = 0 s
[2024-05-16 06:17:55] 2024-05-16 04:17:36,803 | INFO     | . initial setup = 1 s
[2024-05-16 06:17:55] 2024-05-16 04:17:36,803 | INFO     | . payload setup = 5 s
[2024-05-16 06:17:55] 2024-05-16 04:17:36,803 | INFO     | . stage-in = 0 s
[2024-05-16 06:17:55] 2024-05-16 04:17:36,803 | INFO     | . payload execution = 16119 s
[2024-05-16 06:17:55] 2024-05-16 04:17:36,803 | INFO     | . stage-out = 1 s
[2024-05-16 06:17:55] 2024-05-16 04:17:36,803 | INFO     | . log creation = 0 s
[2024-05-16 06:17:55] 2024-05-16 04:17:36,804 | INFO     | ..............................
[2024-05-16 06:17:55] 2024-05-16 04:17:36,903 | INFO     | 
[2024-05-16 06:17:55] 2024-05-16 04:17:36,903 | INFO     | job summary report
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | --------------------------------------------------
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | PanDA job id: 6205826378
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | task id: 38776146
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | errors: (none)
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | pilot state: finished 
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | transexitcode: 0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | exeerrorcode: 0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | exeerrordiag: 
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | exitcode: 0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,904 | INFO     | exitmsg: OK
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | cpuconsumptiontime: 61219 s
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | nevents: 400
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | neventsw: 0
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | pid: 3195631
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | pgrp: 3195631
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | corecount: 4
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | event service: False
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | sizes: {0: 2392023, 1: 2392222, 5: 2392428, 11: 2392484, 16129: 2424009, 16132: 2433175, 16141: 2433289}
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | --------------------------------------------------
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | 
[2024-05-16 06:17:55] 2024-05-16 04:17:36,905 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-05-16 06:17:55] 2024-05-16 04:17:36,929 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,929 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,929 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,929 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,931 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 06:17:55] 2024-05-16 04:17:36,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,931 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 06:17:55] 2024-05-16 04:17:36,931 | INFO     | job 6205826378 has completed (purged errors)
[2024-05-16 06:17:55] 2024-05-16 04:17:36,931 | INFO     | overall cleanup function is called
[2024-05-16 06:17:55] 2024-05-16 04:17:37,939 | INFO     | --- collectZombieJob: --- 10, [3195631]
[2024-05-16 06:17:55] 2024-05-16 04:17:37,939 | INFO     | zombie collector waiting for pid 3195631
[2024-05-16 06:17:55] 2024-05-16 04:17:37,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 06:17:55] 2024-05-16 04:17:38,944 | INFO     | collected zombie processes
[2024-05-16 06:17:55] 2024-05-16 04:17:38,944 | INFO     | will now attempt to kill all subprocesses of pid=3195631
[2024-05-16 06:17:55] 2024-05-16 04:17:39,224 | INFO     | process IDs to be killed: [3195631] (in reverse order)
[2024-05-16 06:17:55] 2024-05-16 04:17:39,526 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 06:17:55] 2024-05-16 04:17:39,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 06:17:55] 2024-05-16 04:17:39,548 | INFO     | did not find any defunct processes belonging to 3195631
[2024-05-16 06:17:55] 2024-05-16 04:17:39,565 | INFO     | did not find any defunct processes belonging to 3195631
[2024-05-16 06:17:55] 2024-05-16 04:17:39,565 | INFO     | ready for new job
[2024-05-16 06:17:55] 2024-05-16 04:17:39,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 06:17:55] 2024-05-16 04:17:39,567 | INFO     | *************************************
[2024-05-16 06:17:55] 2024-05-16 04:17:39,568 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 06:17:55] 2024-05-16 04:17:39,568 | INFO     | *************************************
[2024-05-16 06:17:55] 2024-05-16 04:17:39,568 | INFO     | 
[2024-05-16 06:17:55] 2024-05-16 04:17:39,575 | INFO     | architecture information:
[2024-05-16 06:17:55] 2024-05-16 04:17:39,576 | INFO     | executing command: cat /etc/os-release
[2024-05-16 06:17:55] 2024-05-16 04:17:39,594 | INFO     | cat /etc/os-release:
[2024-05-16 06:17:55] NAME="CentOS Linux"
[2024-05-16 06:17:55] VERSION="7 (Core)"
[2024-05-16 06:17:55] ID="centos"
[2024-05-16 06:17:55] ID_LIKE="rhel fedora"
[2024-05-16 06:17:55] VERSION_ID="7"
[2024-05-16 06:17:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 06:17:55] ANSI_COLOR="0;31"
[2024-05-16 06:17:55] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 06:17:55] HOME_URL="https://www.centos.org/"
[2024-05-16 06:17:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 06:17:55] 
[2024-05-16 06:17:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 06:17:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 06:17:55] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 06:17:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 06:17:55] 
[2024-05-16 06:17:55] 2024-05-16 04:17:39,594 | INFO     | *************************************
[2024-05-16 06:17:55] 2024-05-16 04:17:40,097 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-05-16 06:17:55] 2024-05-16 04:17:40,119 | INFO     | sufficient remaining disk space (3111547568128 B)
[2024-05-16 06:17:55] 2024-05-16 04:17:40,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 06:17:55] 2024-05-16 04:17:40,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 06:17:55] 2024-05-16 04:17:40,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 06:17:55] 2024-05-16 04:17:40,120 | INFO     | aborting loop
[2024-05-16 06:17:55] 2024-05-16 04:17:40,670 | INFO     | all job control threads have been joined
[2024-05-16 06:17:55] 2024-05-16 04:17:40,741 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 06:17:55] 2024-05-16 04:17:40,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 06:17:55] 2024-05-16 04:17:40,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 06:17:55] 2024-05-16 04:17:40,962 | INFO     | all data control threads have been joined
[2024-05-16 06:17:55] 2024-05-16 04:17:40,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 06:17:55] 2024-05-16 04:17:41,124 | INFO     | [job] retrieve thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:41,125 | INFO     | [job] job monitor thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:41,151 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:41,247 | INFO     | all payload control threads have been joined
[2024-05-16 06:17:55] 2024-05-16 04:17:41,469 | INFO     | [payload] failed_post thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:41,675 | INFO     | [job] control thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:41,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 06:17:55] 2024-05-16 04:17:41,967 | INFO     | [data] control thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:42,041 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:42,110 | INFO     | [job] validate thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:42,252 | INFO     | [payload] control thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:42,300 | INFO     | [data] copytool_in thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:42,389 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:42,410 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:42,501 | INFO     | [payload] validate_post thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:42,921 | INFO     | [job] queue monitor thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:42,994 | INFO     | [data] copytool_out thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:43,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 06:17:55] 2024-05-16 04:17:47,090 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 06:17:55] 2024-05-16 04:17:49,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47150980658240)>', '<ExcThread(monitor, started 47151154009856)>']
[2024-05-16 06:17:55] 2024-05-16 04:17:49,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 06:17:55] 2024-05-16 04:17:49,786 | INFO     | [monitor] control thread has ended
[2024-05-16 06:17:55] 2024-05-16 04:17:54,159 | INFO     | all workflow threads have been joined
[2024-05-16 06:17:55] 2024-05-16 04:17:54,159 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 06:17:55] 2024-05-16 04:17:54,160 | INFO     | traces error code: 0
[2024-05-16 06:17:55] 2024-05-16 04:17:54,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 06:17:55] 2024-05-16 04:17:54,296 [wrapper] ==== pilot stdout END ====
[2024-05-16 06:17:55] 2024-05-16 04:17:54,316 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 06:17:55] 2024-05-16 04:17:54,329 [wrapper] pilotpid: 3188113
[2024-05-16 06:17:55] 2024-05-16 04:17:54,346 [wrapper] Pilot exit status: 0
[2024-05-16 06:17:55] 2024-05-16 04:17:54,408 [wrapper] pandaids: 6205826378
[2024-05-16 06:17:55] 2024-05-16 04:17:54,565 [wrapper] cleanup: SIGTERM to supervisor_pilot  550363 3188114
[2024-05-16 06:17:55] 2024-05-16 04:17:54,568 [wrapper] Test setup, not cleaning
[2024-05-16 06:17:55] 2024-05-16 04:17:54,571 [wrapper] ==== wrapper stdout END ====
[2024-05-16 06:17:55] 2024-05-16 04:17:54,573 [wrapper] ==== wrapper stderr END ====
[2024-05-16 06:17:55] 2024-05-16 04:17:54,582 [wrapper] apfmon messages muted
[2024-05-16 06:17:55]  *** Error codes and diagnostics ***
[2024-05-16 06:17:55]     "exeErrorCode": 0,
[2024-05-16 06:17:55]     "exeErrorDiag": "",
[2024-05-16 06:17:55]     "pilotErrorCode": 0,
[2024-05-16 06:17:55]     "pilotErrorDiag": "",
[2024-05-16 06:17:55]  *** Listing of results directory ***
[2024-05-16 06:17:55] total 874228
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc    467845 May 13 11:49 pilot3.tar.gz
[2024-05-16 06:17:55] -rwx------ 1 boinc boinc     32251 May 13 11:55 runpilot2-wrapper.sh
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc      5633 May 13 11:55 queuedata.json
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc       100 May 16 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 06:17:55] -rwxr-xr-x 1 boinc boinc      7986 May 16 01:48 run_atlas
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc       105 May 16 01:48 job.xml
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc      6643 May 16 01:48 init_data.xml
[2024-05-16 06:17:55] -rw-r--r-- 2 boinc boinc 615479646 May 16 01:48 EVNT.38776140._000159.pool.root.1
[2024-05-16 06:17:55] -rw-r--r-- 2 boinc boinc     17537 May 16 01:48 start_atlas.sh
[2024-05-16 06:17:55] drwxrwx--x 2 boinc boinc      4096 May 16 01:48 shared
[2024-05-16 06:17:55] -rw-r--r-- 2 boinc boinc    479983 May 16 01:48 input.tar.gz
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc         0 May 16 01:48 boinc_lockfile
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc      2622 May 16 01:48 pandaJob.out
[2024-05-16 06:17:55] -rw------- 1 boinc boinc       424 May 16 01:48 setup.sh.local
[2024-05-16 06:17:55] -rw------- 1 boinc boinc   1011347 May 16 01:48 agis_schedconf.cvmfs.json
[2024-05-16 06:17:55] -rw------- 1 boinc boinc   1324701 May 16 01:48 cric_ddmendpoints.json
[2024-05-16 06:17:55] drwx------ 4 boinc boinc      4096 May 16 01:48 pilot3
[2024-05-16 06:17:55] -rw------- 1 boinc boinc 272063119 May 16 06:16 HITS.38776146._003979.pool.root.1
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc       531 May 16 06:16 boinc_task_state.xml
[2024-05-16 06:17:55] -rw------- 1 boinc boinc        95 May 16 06:17 pilot_heartbeat.json
[2024-05-16 06:17:55] -rw------- 1 boinc boinc      1041 May 16 06:17 memory_monitor_summary.json
[2024-05-16 06:17:55] -rw------- 1 boinc boinc         0 May 16 06:17 agis_ddmendpoints.agis.ALL.json
[2024-05-16 06:17:55] -rw------- 1 boinc boinc    377901 May 16 06:17 log.38776146._003979.job.log.tgz.1
[2024-05-16 06:17:55] -rw------- 1 boinc boinc      7720 May 16 06:17 heartbeat.json
[2024-05-16 06:17:55] -rw------- 1 boinc boinc      4222 May 16 06:17 pilotlog.txt
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc        28 May 16 06:17 wrapper_checkpoint.txt
[2024-05-16 06:17:55] -rw------- 1 boinc boinc   1694262 May 16 06:17 log.38776146._003979.job.log.1
[2024-05-16 06:17:55] -rw------- 1 boinc boinc       357 May 16 06:17 output.list
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc       620 May 16 06:17 runtime_log
[2024-05-16 06:17:55] -rw------- 1 boinc boinc   2088960 May 16 06:17 result.tar.gz
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc     11410 May 16 06:17 runtime_log.err
[2024-05-16 06:17:55] -rw------- 1 boinc boinc       658 May 16 06:17 FMsNDmLahQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0GKKDmdoAmhm.diag
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc      8192 May 16 06:17 boinc_mmap_file
[2024-05-16 06:17:55] -rw-r--r-- 1 boinc boinc     21277 May 16 06:17 stderr.txt
[2024-05-16 06:17:55] HITS file was successfully produced:
[2024-05-16 06:17:55] -rw------- 1 boinc boinc 272063119 May 16 06:16 shared/HITS.pool.root.1
[2024-05-16 06:17:55]  *** Contents of shared directory: ***
[2024-05-16 06:17:55] total 869284
[2024-05-16 06:17:55] -rw-r--r-- 2 boinc boinc 615479646 May 16 01:48 ATLAS.root_0
[2024-05-16 06:17:55] -rw-r--r-- 2 boinc boinc     17537 May 16 01:48 start_atlas.sh
[2024-05-16 06:17:55] -rw-r--r-- 2 boinc boinc    479983 May 16 01:48 input.tar.gz
[2024-05-16 06:17:55] -rw------- 1 boinc boinc 272063119 May 16 06:16 HITS.pool.root.1
[2024-05-16 06:17:55] -rw------- 1 boinc boinc   2088960 May 16 06:17 result.tar.gz
06:17:57 (3183425): run_atlas exited; CPU time 60855.691095
06:17:57 (3183425): called boinc_finish(0)

</stderr_txt>
]]>

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