Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:29:44 (3731835): wrapper (7.7.26015): starting
06:29:44 (3731835): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 06:29:44] Arguments: --nthreads 4
[2024-05-17 06:29:44] Threads: 4
[2024-05-17 06:29:44] Checking for CVMFS
[2024-05-17 06:29:44] No cvmfs_config command found, will try listing directly
[2024-05-17 06:29:44] CVMFS is ok
[2024-05-17 06:29:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 06:29:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 06:29:44] Further information can be found at the LHC@home message board.
[2024-05-17 06:29:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 06:29:44] Checking for apptainer binary...
[2024-05-17 06:29:44] which: no apptainer in ((null))
[2024-05-17 06:29:44] apptainer is not installed, using version from CVMFS
[2024-05-17 06:29:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 06:29:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-17 06:29:45] apptainer works
[2024-05-17 06:29:45] Set ATHENA_PROC_NUMBER=4
[2024-05-17 06:29:45] Set ATHENA_CORE_NUMBER=4
[2024-05-17 06:29:45] Starting ATLAS job with PandaID=6205826357
[2024-05-17 06:29:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 09:02:08]  *** The last 200 lines of the pilot log: ***
[2024-05-17 09:02:08] 2024-05-17 07:01:48,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 09:02:08] 2024-05-17 07:01:48,327 | INFO     | fitting pss+swap vs Time
[2024-05-17 09:02:08] 2024-05-17 07:01:48,327 | INFO     | model: linear, x: [1715920222.0, 1715920283.0, 1715920344.0, 1715920405.0, 1715920466.0, 1715920527.0, 1715920588.0, 1715920649.0, 1715920710.0, 1715920771.0, 1715
[2024-05-17 09:02:08] 2024-05-17 07:01:48,327 | INFO     | sum of square deviations: 1025693650.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,328 | INFO     | sum of deviations: 30590667716.000008
[2024-05-17 09:02:08] 2024-05-17 07:01:48,328 | INFO     | mean x: 1715924736.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,328 | INFO     | mean y: 2338004.536912752
[2024-05-17 09:02:08] 2024-05-17 07:01:48,328 | INFO     | -- intersect: -51174037538.62945
[2024-05-17 09:02:08] 2024-05-17 07:01:48,328 | INFO     | intersect: -51174037538.62945
[2024-05-17 09:02:08] 2024-05-17 07:01:48,329 | INFO     | chi2: 3.837504295915196
[2024-05-17 09:02:08] 2024-05-17 07:01:48,329 | INFO     | model: linear, x: [1715920222.0, 1715920283.0, 1715920344.0, 1715920405.0, 1715920466.0, 1715920527.0, 1715920588.0, 1715920649.0, 1715920710.0, 1715920771.0, 1715
[2024-05-17 09:02:08] 2024-05-17 07:01:48,329 | INFO     | sum of square deviations: 925859220.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,330 | INFO     | sum of deviations: 29880144961.999992
[2024-05-17 09:02:08] 2024-05-17 07:01:48,330 | INFO     | mean x: 1715924583.5
[2024-05-17 09:02:08] 2024-05-17 07:01:48,330 | INFO     | mean y: 2336918.9305555555
[2024-05-17 09:02:08] 2024-05-17 07:01:48,330 | INFO     | -- intersect: -55375493955.65906
[2024-05-17 09:02:08] 2024-05-17 07:01:48,330 | INFO     | intersect: -55375493955.65906
[2024-05-17 09:02:08] 2024-05-17 07:01:48,331 | INFO     | chi2: 3.844554402084479
[2024-05-17 09:02:08] 2024-05-17 07:01:48,331 | INFO     | current chi2=3.844554402084479 (change=-0.18371591601311243 %)
[2024-05-17 09:02:08] 2024-05-17 07:01:48,331 | INFO     | right removable region: 143
[2024-05-17 09:02:08] 2024-05-17 07:01:48,331 | INFO     | model: linear, x: [1715920527.0, 1715920588.0, 1715920649.0, 1715920710.0, 1715920771.0, 1715920832.0, 1715920893.0, 1715920954.0, 1715921015.0, 1715921076.0, 1715
[2024-05-17 09:02:08] 2024-05-17 07:01:48,331 | INFO     | sum of square deviations: 925859220.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,332 | INFO     | sum of deviations: -1746156262.4999943
[2024-05-17 09:02:08] 2024-05-17 07:01:48,332 | INFO     | mean x: 1715924888.5
[2024-05-17 09:02:08] 2024-05-17 07:01:48,332 | INFO     | mean y: 2387166.2291666665
[2024-05-17 09:02:08] 2024-05-17 07:01:48,332 | INFO     | -- intersect: 3238595139.6550612
[2024-05-17 09:02:08] 2024-05-17 07:01:48,332 | INFO     | intersect: 3238595139.6550612
[2024-05-17 09:02:08] 2024-05-17 07:01:48,333 | INFO     | chi2: 1.4651040420553954
[2024-05-17 09:02:08] 2024-05-17 07:01:48,333 | INFO     | current chi2=1.4651040420553954 (change=61.821435780152356 %)
[2024-05-17 09:02:08] 2024-05-17 07:01:48,333 | INFO     | model: linear, x: [1715920832.0, 1715920893.0, 1715920954.0, 1715921015.0, 1715921076.0, 1715921137.0, 1715921198.0, 1715921259.0, 1715921320.0, 1715921381.0, 1715
[2024-05-17 09:02:08] 2024-05-17 07:01:48,333 | INFO     | sum of square deviations: 832722590.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,334 | INFO     | sum of deviations: -26254959614.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,334 | INFO     | mean x: 1715925041.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,334 | INFO     | mean y: 2427305.6043165466
[2024-05-17 09:02:08] 2024-05-17 07:01:48,334 | INFO     | -- intersect: 54103929045.94535
[2024-05-17 09:02:08] 2024-05-17 07:01:48,334 | INFO     | intersect: 54103929045.94535
[2024-05-17 09:02:08] 2024-05-17 07:01:48,335 | INFO     | chi2: 0.18187320783948366
[2024-05-17 09:02:08] 2024-05-17 07:01:48,335 | INFO     | current chi2=0.18187320783948366 (change=87.58632816381193 %)
[2024-05-17 09:02:08] 2024-05-17 07:01:48,335 | INFO     | model: linear, x: [1715921137.0, 1715921198.0, 1715921259.0, 1715921320.0, 1715921381.0, 1715921442.0, 1715921503.0, 1715921564.0, 1715921625.0, 1715921686.0, 1715
[2024-05-17 09:02:08] 2024-05-17 07:01:48,335 | INFO     | sum of square deviations: 746051197.5
[2024-05-17 09:02:08] 2024-05-17 07:01:48,336 | INFO     | sum of deviations: -25582927982.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,336 | INFO     | mean x: 1715925193.5
[2024-05-17 09:02:08] 2024-05-17 07:01:48,336 | INFO     | mean y: 2426008.880597015
[2024-05-17 09:02:08] 2024-05-17 07:01:48,336 | INFO     | -- intersect: 58843415467.66358
[2024-05-17 09:02:08] 2024-05-17 07:01:48,336 | INFO     | intersect: 58843415467.66358
[2024-05-17 09:02:08] 2024-05-17 07:01:48,336 | INFO     | chi2: 0.15182300250584685
[2024-05-17 09:02:08] 2024-05-17 07:01:48,337 | INFO     | current chi2=0.15182300250584685 (change=16.522612478556105 %)
[2024-05-17 09:02:08] 2024-05-17 07:01:48,337 | INFO     | left removable region: 30
[2024-05-17 09:02:08] 2024-05-17 07:01:48,337 | INFO     | model: linear, x: [1715922052.0, 1715922113.0, 1715922174.0, 1715922235.0, 1715922296.0, 1715922357.0, 1715922418.0, 1715922479.0, 1715922540.0, 1715922601.0, 1715
[2024-05-17 09:02:08] 2024-05-17 07:01:48,337 | INFO     | sum of square deviations: 447383272.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,338 | INFO     | sum of deviations: -12424925483.000004
[2024-05-17 09:02:08] 2024-05-17 07:01:48,338 | INFO     | mean x: 1715925468.0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,338 | INFO     | mean y: 2401897.8230088498
[2024-05-17 09:02:08] 2024-05-17 07:01:48,338 | INFO     | -- intersect: 47657840553.2985
[2024-05-17 09:02:08] 2024-05-17 07:01:48,338 | INFO     | intersect: 47657840553.2985
[2024-05-17 09:02:08] 2024-05-17 07:01:48,338 | INFO     | chi2: 0.1237833738837363
[2024-05-17 09:02:08] 2024-05-17 07:01:48,338 | INFO     | -- intersect: 47657840553.2985
[2024-05-17 09:02:08] 2024-05-17 07:01:48,339 | INFO     | current memory leak: -27.77 B/s (using 113 data points, chi2=0.12)
[2024-05-17 09:02:08] 2024-05-17 07:01:48,339 | INFO     | ..............................
[2024-05-17 09:02:08] 2024-05-17 07:01:48,339 | INFO     | . Timing measurements:
[2024-05-17 09:02:08] 2024-05-17 07:01:48,339 | INFO     | . get job = 0 s
[2024-05-17 09:02:08] 2024-05-17 07:01:48,339 | INFO     | . initial setup = 0 s
[2024-05-17 09:02:08] 2024-05-17 07:01:48,339 | INFO     | . payload setup = 6 s
[2024-05-17 09:02:08] 2024-05-17 07:01:48,339 | INFO     | . stage-in = 0 s
[2024-05-17 09:02:08] 2024-05-17 07:01:48,339 | INFO     | . payload execution = 9082 s
[2024-05-17 09:02:08] 2024-05-17 07:01:48,340 | INFO     | . stage-out = 0 s
[2024-05-17 09:02:08] 2024-05-17 07:01:48,340 | INFO     | . log creation = 0 s
[2024-05-17 09:02:08] 2024-05-17 07:01:48,340 | INFO     | ..............................
[2024-05-17 09:02:08] 2024-05-17 07:01:48,439 | INFO     | 
[2024-05-17 09:02:08] 2024-05-17 07:01:48,439 | INFO     | job summary report
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | --------------------------------------------------
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | PanDA job id: 6205826357
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | task id: 38776146
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | errors: (none)
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | pilot state: finished 
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | transexitcode: 0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | exeerrorcode: 0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | exeerrordiag: 
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | exitcode: 0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | exitmsg: OK
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | cpuconsumptiontime: 33564 s
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | nevents: 400
[2024-05-17 09:02:08] 2024-05-17 07:01:48,440 | INFO     | neventsw: 0
[2024-05-17 09:02:08] 2024-05-17 07:01:48,441 | INFO     | pid: 3745244
[2024-05-17 09:02:08] 2024-05-17 07:01:48,441 | INFO     | pgrp: 3745244
[2024-05-17 09:02:08] 2024-05-17 07:01:48,441 | INFO     | corecount: 4
[2024-05-17 09:02:08] 2024-05-17 07:01:48,441 | INFO     | event service: False
[2024-05-17 09:02:08] 2024-05-17 07:01:48,441 | INFO     | sizes: {0: 2392024, 1: 2392223, 5: 2392429, 11: 2392485, 9092: 2420795, 9093: 2429963, 9097: 2430077}
[2024-05-17 09:02:08] 2024-05-17 07:01:48,441 | INFO     | --------------------------------------------------
[2024-05-17 09:02:08] 2024-05-17 07:01:48,441 | INFO     | 
[2024-05-17 09:02:08] 2024-05-17 07:01:48,441 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/1
[2024-05-17 09:02:08] 2024-05-17 07:01:48,460 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,460 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,462 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 09:02:08] 2024-05-17 07:01:48,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,462 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 09:02:08] 2024-05-17 07:01:48,462 | INFO     | job 6205826357 has completed (purged errors)
[2024-05-17 09:02:08] 2024-05-17 07:01:48,462 | INFO     | overall cleanup function is called
[2024-05-17 09:02:08] 2024-05-17 07:01:49,470 | INFO     | --- collectZombieJob: --- 10, [3745244]
[2024-05-17 09:02:08] 2024-05-17 07:01:49,470 | INFO     | zombie collector waiting for pid 3745244
[2024-05-17 09:02:08] 2024-05-17 07:01:49,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 09:02:08] 2024-05-17 07:01:50,475 | INFO     | collected zombie processes
[2024-05-17 09:02:08] 2024-05-17 07:01:50,476 | INFO     | will now attempt to kill all subprocesses of pid=3745244
[2024-05-17 09:02:08] 2024-05-17 07:01:50,677 | INFO     | process IDs to be killed: [3745244] (in reverse order)
[2024-05-17 09:02:08] 2024-05-17 07:01:50,838 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 09:02:08] 2024-05-17 07:01:50,838 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 09:02:08] 2024-05-17 07:01:50,848 | INFO     | did not find any defunct processes belonging to 3745244
[2024-05-17 09:02:08] 2024-05-17 07:01:50,856 | INFO     | did not find any defunct processes belonging to 3745244
[2024-05-17 09:02:08] 2024-05-17 07:01:50,856 | INFO     | ready for new job
[2024-05-17 09:02:08] 2024-05-17 07:01:50,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 09:02:08] 2024-05-17 07:01:50,857 | INFO     | *************************************
[2024-05-17 09:02:08] 2024-05-17 07:01:50,857 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 09:02:08] 2024-05-17 07:01:50,857 | INFO     | *************************************
[2024-05-17 09:02:08] 2024-05-17 07:01:50,857 | INFO     | 
[2024-05-17 09:02:08] 2024-05-17 07:01:50,861 | INFO     | architecture information:
[2024-05-17 09:02:08] 2024-05-17 07:01:50,861 | INFO     | executing command: cat /etc/os-release
[2024-05-17 09:02:08] 2024-05-17 07:01:50,873 | INFO     | cat /etc/os-release:
[2024-05-17 09:02:08] NAME="CentOS Linux"
[2024-05-17 09:02:08] VERSION="7 (Core)"
[2024-05-17 09:02:08] ID="centos"
[2024-05-17 09:02:08] ID_LIKE="rhel fedora"
[2024-05-17 09:02:08] VERSION_ID="7"
[2024-05-17 09:02:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 09:02:08] ANSI_COLOR="0;31"
[2024-05-17 09:02:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 09:02:08] HOME_URL="https://www.centos.org/"
[2024-05-17 09:02:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 09:02:08] 
[2024-05-17 09:02:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 09:02:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 09:02:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 09:02:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 09:02:08] 
[2024-05-17 09:02:08] 2024-05-17 07:01:50,873 | INFO     | *************************************
[2024-05-17 09:02:08] 2024-05-17 07:01:51,376 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/1
[2024-05-17 09:02:08] 2024-05-17 07:01:51,394 | INFO     | sufficient remaining disk space (2999730569216 B)
[2024-05-17 09:02:08] 2024-05-17 07:01:51,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 09:02:08] 2024-05-17 07:01:51,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 09:02:08] 2024-05-17 07:01:51,395 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 09:02:08] 2024-05-17 07:01:51,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:02:08] 2024-05-17 07:01:51,396 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 09:02:08] 2024-05-17 07:01:51,397 | INFO     | aborting loop
[2024-05-17 09:02:08] 2024-05-17 07:01:51,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 09:02:08] 2024-05-17 07:01:51,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 09:02:08] 2024-05-17 07:01:51,480 | INFO     | all payload control threads have been joined
[2024-05-17 09:02:08] 2024-05-17 07:01:51,842 | INFO     | all job control threads have been joined
[2024-05-17 09:02:08] 2024-05-17 07:01:52,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 09:02:08] 2024-05-17 07:01:52,343 | INFO     | all data control threads have been joined
[2024-05-17 09:02:08] 2024-05-17 07:01:52,400 | INFO     | [job] retrieve thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:52,402 | INFO     | [job] job monitor thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:52,476 | INFO     | [payload] validate_post thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:52,486 | INFO     | [payload] control thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:52,848 | INFO     | [job] control thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:53,154 | INFO     | [job] validate thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:53,305 | INFO     | [data] copytool_in thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:53,315 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:53,343 | INFO     | [payload] failed_post thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:53,348 | INFO     | [data] control thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:53,373 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:53,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:02:08] 2024-05-17 07:01:53,567 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:54,213 | INFO     | [data] copytool_out thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:54,455 | INFO     | [job] queue monitor thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:01:54,800 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 09:02:08] 2024-05-17 07:01:58,805 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:02:01,588 | INFO     | job.realtimelogging is not enabled
[2024-05-17 09:02:08] 2024-05-17 07:02:02,593 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 09:02:08] 2024-05-17 07:02:02,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47415179621440)>', '<ExcThread(monitor, started 47415355074304)>']
[2024-05-17 09:02:08] 2024-05-17 07:02:03,456 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 09:02:08] 2024-05-17 07:02:03,457 | INFO     | [monitor] control thread has ended
[2024-05-17 09:02:08] 2024-05-17 07:02:07,854 | INFO     | all workflow threads have been joined
[2024-05-17 09:02:08] 2024-05-17 07:02:07,854 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 09:02:08] 2024-05-17 07:02:07,855 | INFO     | traces error code: 0
[2024-05-17 09:02:08] 2024-05-17 07:02:07,855 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 09:02:08] 2024-05-17 07:02:07,924 [wrapper] ==== pilot stdout END ====
[2024-05-17 09:02:08] 2024-05-17 07:02:07,927 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 09:02:08] 2024-05-17 07:02:07,929 [wrapper] pilotpid: 3736985
[2024-05-17 09:02:08] 2024-05-17 07:02:07,932 [wrapper] Pilot exit status: 0
[2024-05-17 09:02:08] 2024-05-17 07:02:07,939 [wrapper] pandaids: 6205826357
[2024-05-17 09:02:08] 2024-05-17 07:02:08,069 [wrapper] cleanup: SIGTERM to supervisor_pilot  181959 3736986
[2024-05-17 09:02:08] 2024-05-17 07:02:08,070 [wrapper] Test setup, not cleaning
[2024-05-17 09:02:08] 2024-05-17 07:02:08,072 [wrapper] ==== wrapper stdout END ====
[2024-05-17 09:02:08] 2024-05-17 07:02:08,074 [wrapper] ==== wrapper stderr END ====
[2024-05-17 09:02:08] 2024-05-17 07:02:08,078 [wrapper] apfmon messages muted
[2024-05-17 09:02:08]  *** Error codes and diagnostics ***
[2024-05-17 09:02:08]     "exeErrorCode": 0,
[2024-05-17 09:02:08]     "exeErrorDiag": "",
[2024-05-17 09:02:08]     "pilotErrorCode": 0,
[2024-05-17 09:02:08]     "pilotErrorDiag": "",
[2024-05-17 09:02:08]  *** Listing of results directory ***
[2024-05-17 09:02:08] total 871488
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc    467845 May 13 11:49 pilot3.tar.gz
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc      5633 May 13 11:53 queuedata.json
[2024-05-17 09:02:08] -rwx------ 1 boinc boinc     32251 May 13 11:54 runpilot2-wrapper.sh
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc       100 May 17 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 09:02:08] -rwxr-xr-x 1 boinc boinc      7986 May 17 06:29 run_atlas
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc       105 May 17 06:29 job.xml
[2024-05-17 09:02:08] drwxrwx--x 2 boinc boinc      4096 May 17 06:29 shared
[2024-05-17 09:02:08] -rw-r--r-- 2 boinc boinc    479988 May 17 06:29 input.tar.gz
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc      6646 May 17 06:29 init_data.xml
[2024-05-17 09:02:08] -rw-r--r-- 2 boinc boinc 615479646 May 17 06:29 EVNT.38776140._000159.pool.root.1
[2024-05-17 09:02:08] -rw-r--r-- 2 boinc boinc     17537 May 17 06:29 start_atlas.sh
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc         0 May 17 06:29 boinc_lockfile
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc      2622 May 17 06:29 pandaJob.out
[2024-05-17 09:02:08] -rw------- 1 boinc boinc       424 May 17 06:29 setup.sh.local
[2024-05-17 09:02:08] -rw------- 1 boinc boinc   1019372 May 17 06:29 agis_schedconf.cvmfs.json
[2024-05-17 09:02:08] -rw------- 1 boinc boinc         0 May 17 06:29 agis_ddmendpoints.agis.ALL.json
[2024-05-17 09:02:08] -rw------- 1 boinc boinc   1324701 May 17 06:29 cric_ddmendpoints.json
[2024-05-17 09:02:08] drwx------ 4 boinc boinc      4096 May 17 06:29 pilot3
[2024-05-17 09:02:08] -rw------- 1 boinc boinc 270911655 May 17 09:01 HITS.38776146._003961.pool.root.1
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc       531 May 17 09:01 boinc_task_state.xml
[2024-05-17 09:02:08] -rw------- 1 boinc boinc        95 May 17 09:01 pilot_heartbeat.json
[2024-05-17 09:02:08] -rw------- 1 boinc boinc      1042 May 17 09:01 memory_monitor_summary.json
[2024-05-17 09:02:08] -rw------- 1 boinc boinc    280368 May 17 09:01 log.38776146._003961.job.log.tgz.1
[2024-05-17 09:02:08] -rw------- 1 boinc boinc      7716 May 17 09:01 heartbeat.json
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc      8192 May 17 09:01 boinc_mmap_file
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc        27 May 17 09:01 wrapper_checkpoint.txt
[2024-05-17 09:02:08] -rw------- 1 boinc boinc      4418 May 17 09:02 pilotlog.txt
[2024-05-17 09:02:08] -rw------- 1 boinc boinc    955477 May 17 09:02 log.38776146._003961.job.log.1
[2024-05-17 09:02:08] -rw------- 1 boinc boinc       357 May 17 09:02 output.list
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc       620 May 17 09:02 runtime_log
[2024-05-17 09:02:08] -rw------- 1 boinc boinc   1259520 May 17 09:02 result.tar.gz
[2024-05-17 09:02:08] -rw------- 1 boinc boinc       657 May 17 09:02 xSNNDmOZhQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmBoGKDmBpFxRn.diag
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc     11428 May 17 09:02 runtime_log.err
[2024-05-17 09:02:08] -rw-r--r-- 1 boinc boinc     21321 May 17 09:02 stderr.txt
[2024-05-17 09:02:08] HITS file was successfully produced:
[2024-05-17 09:02:08] -rw------- 1 boinc boinc 270911655 May 17 09:01 shared/HITS.pool.root.1
[2024-05-17 09:02:08]  *** Contents of shared directory: ***
[2024-05-17 09:02:08] total 867352
[2024-05-17 09:02:08] -rw-r--r-- 2 boinc boinc    479988 May 17 06:29 input.tar.gz
[2024-05-17 09:02:08] -rw-r--r-- 2 boinc boinc 615479646 May 17 06:29 ATLAS.root_0
[2024-05-17 09:02:08] -rw-r--r-- 2 boinc boinc     17537 May 17 06:29 start_atlas.sh
[2024-05-17 09:02:08] -rw------- 1 boinc boinc 270911655 May 17 09:01 HITS.pool.root.1
[2024-05-17 09:02:08] -rw------- 1 boinc boinc   1259520 May 17 09:02 result.tar.gz
09:02:10 (3731835): run_atlas exited; CPU time 33274.806783
09:02:10 (3731835): called boinc_finish(0)

</stderr_txt>
]]>

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