Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:20:03 (607077): wrapper (7.7.26015): starting
17:20:03 (607077): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 17:20:03] Arguments: --nthreads 4
[2024-05-15 17:20:03] Threads: 4
[2024-05-15 17:20:03] Checking for CVMFS
[2024-05-15 17:20:03] No cvmfs_config command found, will try listing directly
[2024-05-15 17:20:03] CVMFS is ok
[2024-05-15 17:20:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 17:20:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 17:20:03] Further information can be found at the LHC@home message board.
[2024-05-15 17:20:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 17:20:03] Checking for apptainer binary...
[2024-05-15 17:20:03] which: no apptainer in ((null))
[2024-05-15 17:20:03] apptainer is not installed, using version from CVMFS
[2024-05-15 17:20:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 17:20:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-15 17:20:04] apptainer works
[2024-05-15 17:20:04] Set ATHENA_PROC_NUMBER=4
[2024-05-15 17:20:04] Set ATHENA_CORE_NUMBER=4
[2024-05-15 17:20:04] Starting ATLAS job with PandaID=6205826404
[2024-05-15 17:20:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 20:49:31]  *** The last 200 lines of the pilot log: ***
[2024-05-15 20:49:31] 2024-05-15 18:49:15,560 | INFO     | -- intersect: -41061783063.17696
[2024-05-15 20:49:31] 2024-05-15 18:49:15,560 | INFO     | intersect: -41061783063.17696
[2024-05-15 20:49:31] 2024-05-15 18:49:15,560 | INFO     | chi2: 3.525317427870526
[2024-05-15 20:49:31] 2024-05-15 18:49:15,560 | INFO     | model: linear, x: [1715786443.0, 1715786504.0, 1715786565.0, 1715786626.0, 1715786687.0, 1715786748.0, 1715786809.0, 1715786870.0, 1715786931.0, 1715786992.0, 1715
[2024-05-15 20:49:31] 2024-05-15 18:49:15,561 | INFO     | sum of square deviations: 2480604650.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,562 | INFO     | sum of deviations: 62168608171.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,562 | INFO     | mean x: 1715792512.5
[2024-05-15 20:49:31] 2024-05-15 18:49:15,562 | INFO     | mean y: 2327224.51
[2024-05-15 20:49:31] 2024-05-15 18:49:15,562 | INFO     | -- intersect: -42998653368.00324
[2024-05-15 20:49:31] 2024-05-15 18:49:15,562 | INFO     | intersect: -42998653368.00324
[2024-05-15 20:49:31] 2024-05-15 18:49:15,562 | INFO     | chi2: 3.528441111527287
[2024-05-15 20:49:31] 2024-05-15 18:49:15,562 | INFO     | current chi2=3.528441111527287 (change=-0.08860716008339237 %)
[2024-05-15 20:49:31] 2024-05-15 18:49:15,562 | INFO     | right removable region: 199
[2024-05-15 20:49:31] 2024-05-15 18:49:15,562 | INFO     | model: linear, x: [1715786748.0, 1715786809.0, 1715786870.0, 1715786931.0, 1715786992.0, 1715787053.0, 1715787114.0, 1715787175.0, 1715787236.0, 1715787297.0, 1715
[2024-05-15 20:49:31] 2024-05-15 18:49:15,565 | INFO     | sum of square deviations: 2480604650.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,566 | INFO     | sum of deviations: 18920718310.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,566 | INFO     | mean x: 1715792817.5
[2024-05-15 20:49:31] 2024-05-15 18:49:15,566 | INFO     | mean y: 2364501.72
[2024-05-15 20:49:31] 2024-05-15 18:49:15,566 | INFO     | -- intersect: -13084780432.172928
[2024-05-15 20:49:31] 2024-05-15 18:49:15,566 | INFO     | intersect: -13084780432.172928
[2024-05-15 20:49:31] 2024-05-15 18:49:15,567 | INFO     | chi2: 1.2581286722730083
[2024-05-15 20:49:31] 2024-05-15 18:49:15,567 | INFO     | current chi2=1.2581286722730083 (change=64.3116202153466 %)
[2024-05-15 20:49:31] 2024-05-15 18:49:15,567 | INFO     | model: linear, x: [1715787053.0, 1715787114.0, 1715787175.0, 1715787236.0, 1715787297.0, 1715787358.0, 1715787419.0, 1715787480.0, 1715787541.0, 1715787602.0, 1715
[2024-05-15 20:49:31] 2024-05-15 18:49:15,567 | INFO     | sum of square deviations: 2299168690.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,568 | INFO     | sum of deviations: -15327836061.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,568 | INFO     | mean x: 1715792970.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,568 | INFO     | mean y: 2393290.4615384615
[2024-05-15 20:49:31] 2024-05-15 18:49:15,568 | INFO     | -- intersect: 11441046518.979666
[2024-05-15 20:49:31] 2024-05-15 18:49:15,568 | INFO     | intersect: 11441046518.979666
[2024-05-15 20:49:31] 2024-05-15 18:49:15,568 | INFO     | chi2: 0.06019580539740108
[2024-05-15 20:49:31] 2024-05-15 18:49:15,568 | INFO     | current chi2=0.06019580539740108 (change=95.21544920451993 %)
[2024-05-15 20:49:31] 2024-05-15 18:49:15,569 | INFO     | model: linear, x: [1715787358.0, 1715787419.0, 1715787480.0, 1715787541.0, 1715787602.0, 1715787663.0, 1715787724.0, 1715787785.0, 1715787846.0, 1715787907.0, 1715
[2024-05-15 20:49:31] 2024-05-15 18:49:15,569 | INFO     | sum of square deviations: 2126802667.5
[2024-05-15 20:49:31] 2024-05-15 18:49:15,570 | INFO     | sum of deviations: -15557875631.5
[2024-05-15 20:49:31] 2024-05-15 18:49:15,570 | INFO     | mean x: 1715793122.5
[2024-05-15 20:49:31] 2024-05-15 18:49:15,570 | INFO     | mean y: 2393437.0263157897
[2024-05-15 20:49:31] 2024-05-15 18:49:15,570 | INFO     | -- intersect: 12553673542.677229
[2024-05-15 20:49:31] 2024-05-15 18:49:15,570 | INFO     | intersect: 12553673542.677229
[2024-05-15 20:49:31] 2024-05-15 18:49:15,570 | INFO     | chi2: 0.034944463328791246
[2024-05-15 20:49:31] 2024-05-15 18:49:15,570 | INFO     | current chi2=0.034944463328791246 (change=41.94867383517066 %)
[2024-05-15 20:49:31] 2024-05-15 18:49:15,570 | INFO     | model: linear, x: [1715787663.0, 1715787724.0, 1715787785.0, 1715787846.0, 1715787907.0, 1715787968.0, 1715788029.0, 1715788090.0, 1715788151.0, 1715788212.0, 1715
[2024-05-15 20:49:31] 2024-05-15 18:49:15,570 | INFO     | sum of square deviations: 1963274020.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,571 | INFO     | sum of deviations: -12456495545.000002
[2024-05-15 20:49:31] 2024-05-15 18:49:15,571 | INFO     | mean x: 1715793275.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,571 | INFO     | mean y: 2390557.102702703
[2024-05-15 20:49:31] 2024-05-15 18:49:15,571 | INFO     | -- intersect: 10888681043.531319
[2024-05-15 20:49:31] 2024-05-15 18:49:15,572 | INFO     | intersect: 10888681043.531319
[2024-05-15 20:49:31] 2024-05-15 18:49:15,572 | INFO     | chi2: 0.02975704643814743
[2024-05-15 20:49:31] 2024-05-15 18:49:15,572 | INFO     | current chi2=0.02975704643814743 (change=14.844746195801006 %)
[2024-05-15 20:49:31] 2024-05-15 18:49:15,572 | INFO     | left removable region: 40
[2024-05-15 20:49:31] 2024-05-15 18:49:15,572 | INFO     | model: linear, x: [1715788883.0, 1715788944.0, 1715789005.0, 1715789066.0, 1715789127.0, 1715789188.0, 1715789249.0, 1715789310.0, 1715789371.0, 1715789432.0, 1715
[2024-05-15 20:49:31] 2024-05-15 18:49:15,572 | INFO     | sum of square deviations: 1246386160.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,573 | INFO     | sum of deviations: -2608913331.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,573 | INFO     | mean x: 1715793702.0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,573 | INFO     | mean y: 2379712.477987421
[2024-05-15 20:49:31] 2024-05-15 18:49:15,573 | INFO     | -- intersect: 3593848557.4093533
[2024-05-15 20:49:31] 2024-05-15 18:49:15,573 | INFO     | intersect: 3593848557.4093533
[2024-05-15 20:49:31] 2024-05-15 18:49:15,573 | INFO     | chi2: 0.01200390716523582
[2024-05-15 20:49:31] 2024-05-15 18:49:15,574 | INFO     | -- intersect: 3593848557.4093533
[2024-05-15 20:49:31] 2024-05-15 18:49:15,574 | INFO     | current memory leak: -2.09 B/s (using 159 data points, chi2=0.01)
[2024-05-15 20:49:31] 2024-05-15 18:49:15,574 | INFO     | ..............................
[2024-05-15 20:49:31] 2024-05-15 18:49:15,574 | INFO     | . Timing measurements:
[2024-05-15 20:49:31] 2024-05-15 18:49:15,574 | INFO     | . get job = 0 s
[2024-05-15 20:49:31] 2024-05-15 18:49:15,574 | INFO     | . initial setup = 1 s
[2024-05-15 20:49:31] 2024-05-15 18:49:15,574 | INFO     | . payload setup = 6 s
[2024-05-15 20:49:31] 2024-05-15 18:49:15,574 | INFO     | . stage-in = 0 s
[2024-05-15 20:49:31] 2024-05-15 18:49:15,575 | INFO     | . payload execution = 12506 s
[2024-05-15 20:49:31] 2024-05-15 18:49:15,575 | INFO     | . stage-out = 0 s
[2024-05-15 20:49:31] 2024-05-15 18:49:15,575 | INFO     | . log creation = 0 s
[2024-05-15 20:49:31] 2024-05-15 18:49:15,575 | INFO     | ..............................
[2024-05-15 20:49:31] 2024-05-15 18:49:15,650 | INFO     | 
[2024-05-15 20:49:31] 2024-05-15 18:49:15,650 | INFO     | job summary report
[2024-05-15 20:49:31] 2024-05-15 18:49:15,650 | INFO     | --------------------------------------------------
[2024-05-15 20:49:31] 2024-05-15 18:49:15,650 | INFO     | PanDA job id: 6205826404
[2024-05-15 20:49:31] 2024-05-15 18:49:15,650 | INFO     | task id: 38776146
[2024-05-15 20:49:31] 2024-05-15 18:49:15,650 | INFO     | errors: (none)
[2024-05-15 20:49:31] 2024-05-15 18:49:15,650 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 20:49:31] 2024-05-15 18:49:15,650 | INFO     | pilot state: finished 
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | transexitcode: 0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | exeerrorcode: 0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | exeerrordiag: 
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | exitcode: 0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | exitmsg: OK
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | cpuconsumptiontime: 47086 s
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | nevents: 400
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | neventsw: 0
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | pid: 622351
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | pgrp: 622351
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | corecount: 4
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | event service: False
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | sizes: {0: 2392186, 1: 2392186, 5: 2392420, 11: 2392476, 12516: 2422284, 12517: 2431266, 12519: 2431450, 12524: 2431620}
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | --------------------------------------------------
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | 
[2024-05-15 20:49:31] 2024-05-15 18:49:15,651 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-05-15 20:49:31] 2024-05-15 18:49:15,670 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,670 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,670 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,670 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,672 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 20:49:31] 2024-05-15 18:49:15,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,672 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 20:49:31] 2024-05-15 18:49:15,672 | INFO     | job 6205826404 has completed (purged errors)
[2024-05-15 20:49:31] 2024-05-15 18:49:15,672 | INFO     | overall cleanup function is called
[2024-05-15 20:49:31] 2024-05-15 18:49:16,679 | INFO     | --- collectZombieJob: --- 10, [622351]
[2024-05-15 20:49:31] 2024-05-15 18:49:16,680 | INFO     | zombie collector waiting for pid 622351
[2024-05-15 20:49:31] 2024-05-15 18:49:16,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 20:49:31] 2024-05-15 18:49:17,684 | INFO     | collected zombie processes
[2024-05-15 20:49:31] 2024-05-15 18:49:17,684 | INFO     | will now attempt to kill all subprocesses of pid=622351
[2024-05-15 20:49:31] 2024-05-15 18:49:17,845 | INFO     | process IDs to be killed: [622351] (in reverse order)
[2024-05-15 20:49:31] 2024-05-15 18:49:17,983 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 20:49:31] 2024-05-15 18:49:17,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 20:49:31] 2024-05-15 18:49:17,995 | INFO     | did not find any defunct processes belonging to 622351
[2024-05-15 20:49:31] 2024-05-15 18:49:18,003 | INFO     | did not find any defunct processes belonging to 622351
[2024-05-15 20:49:31] 2024-05-15 18:49:18,003 | INFO     | ready for new job
[2024-05-15 20:49:31] 2024-05-15 18:49:18,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 20:49:31] 2024-05-15 18:49:18,005 | INFO     | *************************************
[2024-05-15 20:49:31] 2024-05-15 18:49:18,005 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 20:49:31] 2024-05-15 18:49:18,005 | INFO     | *************************************
[2024-05-15 20:49:31] 2024-05-15 18:49:18,005 | INFO     | 
[2024-05-15 20:49:31] 2024-05-15 18:49:18,010 | INFO     | architecture information:
[2024-05-15 20:49:31] 2024-05-15 18:49:18,010 | INFO     | executing command: cat /etc/os-release
[2024-05-15 20:49:31] 2024-05-15 18:49:18,026 | INFO     | cat /etc/os-release:
[2024-05-15 20:49:31] NAME="CentOS Linux"
[2024-05-15 20:49:31] VERSION="7 (Core)"
[2024-05-15 20:49:31] ID="centos"
[2024-05-15 20:49:31] ID_LIKE="rhel fedora"
[2024-05-15 20:49:31] VERSION_ID="7"
[2024-05-15 20:49:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 20:49:31] ANSI_COLOR="0;31"
[2024-05-15 20:49:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 20:49:31] HOME_URL="https://www.centos.org/"
[2024-05-15 20:49:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 20:49:31] 
[2024-05-15 20:49:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 20:49:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 20:49:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 20:49:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 20:49:31] 
[2024-05-15 20:49:31] 2024-05-15 18:49:18,026 | INFO     | *************************************
[2024-05-15 20:49:31] 2024-05-15 18:49:18,529 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-05-15 20:49:31] 2024-05-15 18:49:18,551 | INFO     | sufficient remaining disk space (3013176459264 B)
[2024-05-15 20:49:31] 2024-05-15 18:49:18,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 20:49:31] 2024-05-15 18:49:18,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 20:49:31] 2024-05-15 18:49:18,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 20:49:31] 2024-05-15 18:49:18,552 | INFO     | aborting loop
[2024-05-15 20:49:31] 2024-05-15 18:49:18,806 | INFO     | all job control threads have been joined
[2024-05-15 20:49:31] 2024-05-15 18:49:18,979 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 20:49:31] 2024-05-15 18:49:18,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 20:49:31] 2024-05-15 18:49:18,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 20:49:31] 2024-05-15 18:49:19,556 | INFO     | [job] retrieve thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:19,557 | INFO     | [job] job monitor thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:19,601 | INFO     | all data control threads have been joined
[2024-05-15 20:49:31] 2024-05-15 18:49:19,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 20:49:31] 2024-05-15 18:49:19,727 | INFO     | all payload control threads have been joined
[2024-05-15 20:49:31] 2024-05-15 18:49:19,808 | INFO     | [job] control thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:19,967 | INFO     | [payload] failed_post thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:20,156 | INFO     | [data] copytool_in thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:20,452 | INFO     | [payload] validate_post thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:20,538 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:20,606 | INFO     | [data] control thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:20,641 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:20,659 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 20:49:31] 2024-05-15 18:49:20,726 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:20,732 | INFO     | [payload] control thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:20,734 | INFO     | [job] validate thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:20,893 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:21,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 20:49:31] 2024-05-15 18:49:21,641 | INFO     | [data] copytool_out thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:21,664 | INFO     | [job] queue monitor thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:25,116 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 20:49:31] 2024-05-15 18:49:25,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47413645956160)>', '<ExcThread(monitor, started 47413815105280)>']
[2024-05-15 20:49:31] 2024-05-15 18:49:26,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 20:49:31] 2024-05-15 18:49:26,010 | INFO     | [monitor] control thread has ended
[2024-05-15 20:49:31] 2024-05-15 18:49:30,626 | INFO     | all workflow threads have been joined
[2024-05-15 20:49:31] 2024-05-15 18:49:30,627 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 20:49:31] 2024-05-15 18:49:30,627 | INFO     | traces error code: 0
[2024-05-15 20:49:31] 2024-05-15 18:49:30,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 20:49:31] 2024-05-15 18:49:30,698 [wrapper] ==== pilot stdout END ====
[2024-05-15 20:49:31] 2024-05-15 18:49:30,700 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 20:49:31] 2024-05-15 18:49:30,702 [wrapper] pilotpid: 612099
[2024-05-15 20:49:31] 2024-05-15 18:49:30,703 [wrapper] Pilot exit status: 0
[2024-05-15 20:49:31] 2024-05-15 18:49:30,727 [wrapper] pandaids: 6205826404
[2024-05-15 20:49:31] 2024-05-15 18:49:30,829 [wrapper] cleanup: SIGTERM to supervisor_pilot 1677330 612100
[2024-05-15 20:49:31] 2024-05-15 18:49:30,831 [wrapper] Test setup, not cleaning
[2024-05-15 20:49:31] 2024-05-15 18:49:30,833 [wrapper] ==== wrapper stdout END ====
[2024-05-15 20:49:31] 2024-05-15 18:49:30,836 [wrapper] ==== wrapper stderr END ====
[2024-05-15 20:49:31] 2024-05-15 18:49:30,840 [wrapper] apfmon messages muted
[2024-05-15 20:49:31]  *** Error codes and diagnostics ***
[2024-05-15 20:49:31]     "exeErrorCode": 0,
[2024-05-15 20:49:31]     "exeErrorDiag": "",
[2024-05-15 20:49:31]     "pilotErrorCode": 0,
[2024-05-15 20:49:31]     "pilotErrorDiag": "",
[2024-05-15 20:49:31]  *** Listing of results directory ***
[2024-05-15 20:49:31] total 873656
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc    467845 May 13 11:49 pilot3.tar.gz
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc      5633 May 13 11:51 queuedata.json
[2024-05-15 20:49:31] -rwx------ 1 boinc boinc     32251 May 13 11:52 runpilot2-wrapper.sh
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc       100 May 15 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 20:49:31] -rwxr-xr-x 1 boinc boinc      7986 May 15 17:19 run_atlas
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc       105 May 15 17:19 job.xml
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc      6644 May 15 17:20 init_data.xml
[2024-05-15 20:49:31] -rw-r--r-- 2 boinc boinc 616715070 May 15 17:20 EVNT.38776140._000160.pool.root.1
[2024-05-15 20:49:31] drwxrwx--x 2 boinc boinc      4096 May 15 17:20 shared
[2024-05-15 20:49:31] -rw-r--r-- 2 boinc boinc    479991 May 15 17:20 input.tar.gz
[2024-05-15 20:49:31] -rw-r--r-- 2 boinc boinc     17537 May 15 17:20 start_atlas.sh
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc         0 May 15 17:20 boinc_lockfile
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc      2614 May 15 17:20 pandaJob.out
[2024-05-15 20:49:31] -rw------- 1 boinc boinc       424 May 15 17:20 setup.sh.local
[2024-05-15 20:49:31] -rw------- 1 boinc boinc   1010542 May 15 17:20 agis_schedconf.cvmfs.json
[2024-05-15 20:49:31] -rw------- 1 boinc boinc   1324701 May 15 17:20 cric_ddmendpoints.json
[2024-05-15 20:49:31] drwx------ 4 boinc boinc      4096 May 15 17:20 pilot3
[2024-05-15 20:49:31] -rw------- 1 boinc boinc 271110141 May 15 20:48 HITS.38776146._004000.pool.root.1
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc       532 May 15 20:48 boinc_task_state.xml
[2024-05-15 20:49:31] -rw------- 1 boinc boinc        95 May 15 20:48 pilot_heartbeat.json
[2024-05-15 20:49:31] -rw------- 1 boinc boinc      1042 May 15 20:49 memory_monitor_summary.json
[2024-05-15 20:49:31] -rw------- 1 boinc boinc         0 May 15 20:49 agis_ddmendpoints.agis.ALL.json
[2024-05-15 20:49:31] -rw------- 1 boinc boinc    335224 May 15 20:49 log.38776146._004000.job.log.tgz.1
[2024-05-15 20:49:31] -rw------- 1 boinc boinc      7723 May 15 20:49 heartbeat.json
[2024-05-15 20:49:31] -rw------- 1 boinc boinc      4222 May 15 20:49 pilotlog.txt
[2024-05-15 20:49:31] -rw------- 1 boinc boinc   1300370 May 15 20:49 log.38776146._004000.job.log.1
[2024-05-15 20:49:31] -rw------- 1 boinc boinc       357 May 15 20:49 output.list
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc       620 May 15 20:49 runtime_log
[2024-05-15 20:49:31] -rw------- 1 boinc boinc   1658880 May 15 20:49 result.tar.gz
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc     11410 May 15 20:49 runtime_log.err
[2024-05-15 20:49:31] -rw------- 1 boinc boinc       659 May 15 20:49 3IFODmJXhQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm2nGKDmhzKVSn.diag
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc        28 May 15 20:49 wrapper_checkpoint.txt
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc      8192 May 15 20:49 boinc_mmap_file
[2024-05-15 20:49:31] -rw-r--r-- 1 boinc boinc     21273 May 15 20:49 stderr.txt
[2024-05-15 20:49:31] HITS file was successfully produced:
[2024-05-15 20:49:31] -rw------- 1 boinc boinc 271110141 May 15 20:48 shared/HITS.pool.root.1
[2024-05-15 20:49:31]  *** Contents of shared directory: ***
[2024-05-15 20:49:31] total 869140
[2024-05-15 20:49:31] -rw-r--r-- 2 boinc boinc 616715070 May 15 17:20 ATLAS.root_0
[2024-05-15 20:49:31] -rw-r--r-- 2 boinc boinc    479991 May 15 17:20 input.tar.gz
[2024-05-15 20:49:31] -rw-r--r-- 2 boinc boinc     17537 May 15 17:20 start_atlas.sh
[2024-05-15 20:49:31] -rw------- 1 boinc boinc 271110141 May 15 20:48 HITS.pool.root.1
[2024-05-15 20:49:31] -rw------- 1 boinc boinc   1658880 May 15 20:49 result.tar.gz
20:49:33 (607077): run_atlas exited; CPU time 46673.612016
20:49:33 (607077): called boinc_finish(0)

</stderr_txt>
]]>

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