Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:51:58 (3190528): wrapper (7.7.26015): starting
13:51:58 (3190528): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 13:51:58] Arguments: --nthreads 4
[2024-05-15 13:51:58] Threads: 4
[2024-05-15 13:51:58] Checking for CVMFS
[2024-05-15 13:51:58] No cvmfs_config command found, will try listing directly
[2024-05-15 13:51:58] CVMFS is ok
[2024-05-15 13:51:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 13:51:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 13:51:58] Further information can be found at the LHC@home message board.
[2024-05-15 13:51:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 13:51:58] Checking for apptainer binary...
[2024-05-15 13:51:58] which: no apptainer in ((null))
[2024-05-15 13:51:58] apptainer is not installed, using version from CVMFS
[2024-05-15 13:51:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 13:51:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-15 13:51:58] apptainer works
[2024-05-15 13:51:58] Set ATHENA_PROC_NUMBER=4
[2024-05-15 13:51:58] Set ATHENA_CORE_NUMBER=4
[2024-05-15 13:51:58] Starting ATLAS job with PandaID=6205824962
[2024-05-15 13:51:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:15:43 (3386787): wrapper (7.7.26015): starting
14:15:43 (3386787): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 14:15:43] Arguments: --nthreads 4
[2024-05-15 14:15:43] Threads: 4
[2024-05-15 14:15:43] This job has been restarted, cleaning up previous attempt
[2024-05-15 14:15:43] Checking for CVMFS
[2024-05-15 14:15:43] No cvmfs_config command found, will try listing directly
[2024-05-15 14:15:43] CVMFS is ok
[2024-05-15 14:15:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 14:15:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 14:15:43] Further information can be found at the LHC@home message board.
[2024-05-15 14:15:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 14:15:43] Checking for apptainer binary...
[2024-05-15 14:15:43] which: no apptainer in ((null))
[2024-05-15 14:15:43] apptainer is not installed, using version from CVMFS
[2024-05-15 14:15:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 14:15:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-15 14:15:44] apptainer works
[2024-05-15 14:15:44] Set ATHENA_PROC_NUMBER=4
[2024-05-15 14:15:44] Set ATHENA_CORE_NUMBER=4
[2024-05-15 14:15:44] Starting ATLAS job with PandaID=6205824962
[2024-05-15 14:15:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 18:14:01]  *** The last 200 lines of the pilot log: ***
[2024-05-15 18:14:01] 2024-05-15 16:13:38,057 | INFO     | intersect: -44328007204.177574
[2024-05-15 18:14:01] 2024-05-15 16:13:38,057 | INFO     | chi2: 5.481244202284242
[2024-05-15 18:14:01] 2024-05-15 16:13:38,057 | INFO     | model: linear, x: [1715775379.0, 1715775440.0, 1715775501.0, 1715775562.0, 1715775623.0, 1715775684.0, 1715775745.0, 1715775806.0, 1715775867.0, 1715775928.0, 1715
[2024-05-15 18:14:01] 2024-05-15 16:13:38,057 | INFO     | sum of square deviations: 3723716330.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,059 | INFO     | sum of deviations: 115226846882.99998
[2024-05-15 18:14:01] 2024-05-15 16:13:38,059 | INFO     | mean x: 1715782333.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,059 | INFO     | mean y: 2291594.903930131
[2024-05-15 18:14:01] 2024-05-15 16:13:38,059 | INFO     | -- intersect: -53090954680.691795
[2024-05-15 18:14:01] 2024-05-15 16:13:38,059 | INFO     | intersect: -53090954680.691795
[2024-05-15 18:14:01] 2024-05-15 16:13:38,059 | INFO     | chi2: 4.686817222464728
[2024-05-15 18:14:01] 2024-05-15 16:13:38,059 | INFO     | current chi2=4.686817222464728 (change=14.493552020332286 %)
[2024-05-15 18:14:01] 2024-05-15 16:13:38,060 | INFO     | right removable region: 228
[2024-05-15 18:14:01] 2024-05-15 16:13:38,060 | INFO     | model: linear, x: [1715775684.0, 1715775745.0, 1715775806.0, 1715775867.0, 1715775928.0, 1715775989.0, 1715776050.0, 1715776111.0, 1715776172.0, 1715776233.0, 1715
[2024-05-15 18:14:01] 2024-05-15 16:13:38,060 | INFO     | sum of square deviations: 3723716330.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,061 | INFO     | sum of deviations: 46663856555.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,061 | INFO     | mean x: 1715782638.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,062 | INFO     | mean y: 2318232.917030568
[2024-05-15 18:14:01] 2024-05-15 16:13:38,062 | INFO     | -- intersect: -21499060444.655727
[2024-05-15 18:14:01] 2024-05-15 16:13:38,062 | INFO     | intersect: -21499060444.655727
[2024-05-15 18:14:01] 2024-05-15 16:13:38,062 | INFO     | chi2: 2.834861909135127
[2024-05-15 18:14:01] 2024-05-15 16:13:38,062 | INFO     | current chi2=2.834861909135127 (change=48.280685834910756 %)
[2024-05-15 18:14:01] 2024-05-15 16:13:38,062 | INFO     | model: linear, x: [1715775989.0, 1715776050.0, 1715776111.0, 1715776172.0, 1715776233.0, 1715776294.0, 1715776355.0, 1715776416.0, 1715776477.0, 1715776538.0, 1715
[2024-05-15 18:14:01] 2024-05-15 16:13:38,062 | INFO     | sum of square deviations: 3485088600.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,064 | INFO     | sum of deviations: 1369714069.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,064 | INFO     | mean x: 1715782790.5
[2024-05-15 18:14:01] 2024-05-15 16:13:38,064 | INFO     | mean y: 2347182.4375
[2024-05-15 18:14:01] 2024-05-15 16:13:38,064 | INFO     | -- intersect: -671992008.6797444
[2024-05-15 18:14:01] 2024-05-15 16:13:38,064 | INFO     | intersect: -671992008.6797444
[2024-05-15 18:14:01] 2024-05-15 16:13:38,064 | INFO     | chi2: 1.2361541104336238
[2024-05-15 18:14:01] 2024-05-15 16:13:38,064 | INFO     | current chi2=1.2361541104336238 (change=56.3945564173616 %)
[2024-05-15 18:14:01] 2024-05-15 16:13:38,065 | INFO     | model: linear, x: [1715776294.0, 1715776355.0, 1715776416.0, 1715776477.0, 1715776538.0, 1715776599.0, 1715776660.0, 1715776721.0, 1715776782.0, 1715776843.0, 1715
[2024-05-15 18:14:01] 2024-05-15 16:13:38,065 | INFO     | sum of square deviations: 3256879670.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,066 | INFO     | sum of deviations: -14782620928.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,066 | INFO     | mean x: 1715782943.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,066 | INFO     | mean y: 2357855.7625570777
[2024-05-15 18:14:01] 2024-05-15 16:13:38,066 | INFO     | -- intersect: 7790109142.593867
[2024-05-15 18:14:01] 2024-05-15 16:13:38,067 | INFO     | intersect: 7790109142.593867
[2024-05-15 18:14:01] 2024-05-15 16:13:38,067 | INFO     | chi2: 0.8396751382009136
[2024-05-15 18:14:01] 2024-05-15 16:13:38,067 | INFO     | current chi2=0.8396751382009136 (change=32.07358766081614 %)
[2024-05-15 18:14:01] 2024-05-15 16:13:38,067 | INFO     | model: linear, x: [1715776599.0, 1715776660.0, 1715776721.0, 1715776782.0, 1715776843.0, 1715776904.0, 1715776965.0, 1715777026.0, 1715777087.0, 1715777148.0, 1715
[2024-05-15 18:14:01] 2024-05-15 16:13:38,067 | INFO     | sum of square deviations: 3038856977.5
[2024-05-15 18:14:01] 2024-05-15 16:13:38,069 | INFO     | sum of deviations: -14937547813.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,069 | INFO     | mean x: 1715783095.5
[2024-05-15 18:14:01] 2024-05-15 16:13:38,069 | INFO     | mean y: 2357961.542056075
[2024-05-15 18:14:01] 2024-05-15 16:13:38,069 | INFO     | -- intersect: 8436315931.769826
[2024-05-15 18:14:01] 2024-05-15 16:13:38,069 | INFO     | intersect: 8436315931.769826
[2024-05-15 18:14:01] 2024-05-15 16:13:38,069 | INFO     | chi2: 0.8396122214353157
[2024-05-15 18:14:01] 2024-05-15 16:13:38,069 | INFO     | current chi2=0.8396122214353157 (change=0.007492988982940734 %)
[2024-05-15 18:14:01] 2024-05-15 16:13:38,069 | INFO     | left removable region: 40
[2024-05-15 18:14:01] 2024-05-15 16:13:38,070 | INFO     | model: linear, x: [1715777819.0, 1715777880.0, 1715777941.0, 1715778002.0, 1715778063.0, 1715778124.0, 1715778185.0, 1715778246.0, 1715778307.0, 1715778368.0, 1715
[2024-05-15 18:14:01] 2024-05-15 16:13:38,070 | INFO     | sum of square deviations: 2060343747.0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,071 | INFO     | sum of deviations: 376592253.49999976
[2024-05-15 18:14:01] 2024-05-15 16:13:38,071 | INFO     | mean x: 1715783522.5
[2024-05-15 18:14:01] 2024-05-15 16:13:38,071 | INFO     | mean y: 2366801.8563829786
[2024-05-15 18:14:01] 2024-05-15 16:13:38,071 | INFO     | -- intersect: -311246295.08303887
[2024-05-15 18:14:01] 2024-05-15 16:13:38,071 | INFO     | intersect: -311246295.08303887
[2024-05-15 18:14:01] 2024-05-15 16:13:38,072 | INFO     | chi2: 0.0020165904483752804
[2024-05-15 18:14:01] 2024-05-15 16:13:38,072 | INFO     | -- intersect: -311246295.08303887
[2024-05-15 18:14:01] 2024-05-15 16:13:38,072 | INFO     | current memory leak: 0.18 B/s (using 188 data points, chi2=0.00)
[2024-05-15 18:14:01] 2024-05-15 16:13:38,072 | INFO     | ..............................
[2024-05-15 18:14:01] 2024-05-15 16:13:38,073 | INFO     | . Timing measurements:
[2024-05-15 18:14:01] 2024-05-15 16:13:38,073 | INFO     | . get job = 0 s
[2024-05-15 18:14:01] 2024-05-15 16:13:38,073 | INFO     | . initial setup = 0 s
[2024-05-15 18:14:01] 2024-05-15 16:13:38,073 | INFO     | . payload setup = 5 s
[2024-05-15 18:14:01] 2024-05-15 16:13:38,073 | INFO     | . stage-in = 0 s
[2024-05-15 18:14:01] 2024-05-15 16:13:38,073 | INFO     | . payload execution = 14231 s
[2024-05-15 18:14:01] 2024-05-15 16:13:38,073 | INFO     | . stage-out = 0 s
[2024-05-15 18:14:01] 2024-05-15 16:13:38,073 | INFO     | . log creation = 0 s
[2024-05-15 18:14:01] 2024-05-15 16:13:38,073 | INFO     | ..............................
[2024-05-15 18:14:01] 2024-05-15 16:13:38,464 | INFO     | 
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | job summary report
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | --------------------------------------------------
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | PanDA job id: 6205824962
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | task id: 38776146
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | errors: (none)
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | pilot state: finished 
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | transexitcode: 0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | exeerrorcode: 0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | exeerrordiag: 
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | exitcode: 0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,465 | INFO     | exitmsg: OK
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | cpuconsumptiontime: 53772 s
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | nevents: 400
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | neventsw: 0
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | pid: 3406501
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | pgrp: 3406501
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | corecount: 4
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | event service: False
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | sizes: {0: 2396642, 5: 2396848, 11: 2396904, 14240: 2427553, 14241: 2436535, 14245: 2436591, 14249: 2436889}
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | --------------------------------------------------
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | 
[2024-05-15 18:14:01] 2024-05-15 16:13:38,466 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-05-15 18:14:01] 2024-05-15 16:13:38,492 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,493 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,493 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,493 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,493 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,493 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 18:14:01] 2024-05-15 16:13:38,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,495 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 18:14:01] 2024-05-15 16:13:38,495 | INFO     | job 6205824962 has completed (purged errors)
[2024-05-15 18:14:01] 2024-05-15 16:13:38,495 | INFO     | overall cleanup function is called
[2024-05-15 18:14:01] 2024-05-15 16:13:39,502 | INFO     | --- collectZombieJob: --- 10, [3406501]
[2024-05-15 18:14:01] 2024-05-15 16:13:39,503 | INFO     | zombie collector waiting for pid 3406501
[2024-05-15 18:14:01] 2024-05-15 16:13:39,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 18:14:01] 2024-05-15 16:13:40,507 | INFO     | collected zombie processes
[2024-05-15 18:14:01] 2024-05-15 16:13:40,508 | INFO     | will now attempt to kill all subprocesses of pid=3406501
[2024-05-15 18:14:01] 2024-05-15 16:13:40,722 | INFO     | process IDs to be killed: [3406501] (in reverse order)
[2024-05-15 18:14:01] 2024-05-15 16:13:40,885 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 18:14:01] 2024-05-15 16:13:40,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 18:14:01] 2024-05-15 16:13:40,899 | INFO     | did not find any defunct processes belonging to 3406501
[2024-05-15 18:14:01] 2024-05-15 16:13:40,908 | INFO     | did not find any defunct processes belonging to 3406501
[2024-05-15 18:14:01] 2024-05-15 16:13:40,909 | INFO     | ready for new job
[2024-05-15 18:14:01] 2024-05-15 16:13:40,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 18:14:01] 2024-05-15 16:13:40,910 | INFO     | *************************************
[2024-05-15 18:14:01] 2024-05-15 16:13:40,910 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 18:14:01] 2024-05-15 16:13:40,910 | INFO     | *************************************
[2024-05-15 18:14:01] 2024-05-15 16:13:40,910 | INFO     | 
[2024-05-15 18:14:01] 2024-05-15 16:13:40,915 | INFO     | architecture information:
[2024-05-15 18:14:01] 2024-05-15 16:13:40,916 | INFO     | executing command: cat /etc/os-release
[2024-05-15 18:14:01] 2024-05-15 16:13:40,934 | INFO     | cat /etc/os-release:
[2024-05-15 18:14:01] NAME="CentOS Linux"
[2024-05-15 18:14:01] VERSION="7 (Core)"
[2024-05-15 18:14:01] ID="centos"
[2024-05-15 18:14:01] ID_LIKE="rhel fedora"
[2024-05-15 18:14:01] VERSION_ID="7"
[2024-05-15 18:14:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 18:14:01] ANSI_COLOR="0;31"
[2024-05-15 18:14:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 18:14:01] HOME_URL="https://www.centos.org/"
[2024-05-15 18:14:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 18:14:01] 
[2024-05-15 18:14:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 18:14:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 18:14:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 18:14:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 18:14:01] 
[2024-05-15 18:14:01] 2024-05-15 16:13:40,934 | INFO     | *************************************
[2024-05-15 18:14:01] 2024-05-15 16:13:41,437 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-05-15 18:14:01] 2024-05-15 16:13:41,454 | INFO     | sufficient remaining disk space (2996054261760 B)
[2024-05-15 18:14:01] 2024-05-15 16:13:41,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 18:14:01] 2024-05-15 16:13:41,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 18:14:01] 2024-05-15 16:13:41,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 18:14:01] 2024-05-15 16:13:41,529 | INFO     | all payload control threads have been joined
[2024-05-15 18:14:01] 2024-05-15 16:13:41,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 18:14:01] 2024-05-15 16:13:41,992 | INFO     | aborting loop
[2024-05-15 18:14:01] 2024-05-15 16:13:42,000 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 18:14:01] 2024-05-15 16:13:42,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 18:14:01] 2024-05-15 16:13:42,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 18:14:01] 2024-05-15 16:13:42,460 | INFO     | [job] retrieve thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:42,502 | INFO     | all data control threads have been joined
[2024-05-15 18:14:01] 2024-05-15 16:13:42,534 | INFO     | [payload] control thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:42,607 | INFO     | [job] validate thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:42,988 | INFO     | all job control threads have been joined
[2024-05-15 18:14:01] 2024-05-15 16:13:42,997 | INFO     | [job] job monitor thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:43,142 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:43,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 18:14:01] 2024-05-15 16:13:43,234 | INFO     | [data] copytool_in thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:43,313 | INFO     | [payload] validate_post thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:43,392 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:43,461 | INFO     | [data] copytool_out thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:43,506 | INFO     | [data] control thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:43,620 | INFO     | [payload] failed_post thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:43,936 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:43,993 | INFO     | [job] control thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:44,174 | INFO     | [job] queue monitor thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:44,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 18:14:01] 2024-05-15 16:13:48,481 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:52,306 | INFO     | job.realtimelogging is not enabled
[2024-05-15 18:14:01] 2024-05-15 16:13:53,312 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 18:14:01] 2024-05-15 16:13:55,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47216268112960)>', '<ExcThread(monitor, started 47216439035648)>']
[2024-05-15 18:14:01] 2024-05-15 16:13:56,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 18:14:01] 2024-05-15 16:13:56,063 | INFO     | [monitor] control thread has ended
[2024-05-15 18:14:01] 2024-05-15 16:14:00,087 | INFO     | all workflow threads have been joined
[2024-05-15 18:14:01] 2024-05-15 16:14:00,088 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 18:14:01] 2024-05-15 16:14:00,088 | INFO     | traces error code: 0
[2024-05-15 18:14:01] 2024-05-15 16:14:00,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 18:14:01] 2024-05-15 16:14:00,164 [wrapper] ==== pilot stdout END ====
[2024-05-15 18:14:01] 2024-05-15 16:14:00,167 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 18:14:01] 2024-05-15 16:14:00,170 [wrapper] pilotpid: 3391838
[2024-05-15 18:14:01] 2024-05-15 16:14:00,172 [wrapper] Pilot exit status: 0
[2024-05-15 18:14:01] 2024-05-15 16:14:00,182 [wrapper] pandaids: 6205824962 6205824962
[2024-05-15 18:14:01] 2024-05-15 16:14:00,324 [wrapper] cleanup: SIGTERM to supervisor_pilot  430872 3391839
[2024-05-15 18:14:01] 2024-05-15 16:14:00,327 [wrapper] Test setup, not cleaning
[2024-05-15 18:14:01] 2024-05-15 16:14:00,329 [wrapper] ==== wrapper stdout END ====
[2024-05-15 18:14:01] 2024-05-15 16:14:00,331 [wrapper] ==== wrapper stderr END ====
[2024-05-15 18:14:01] 2024-05-15 16:14:00,336 [wrapper] apfmon messages muted
[2024-05-15 18:14:01]  *** Error codes and diagnostics ***
[2024-05-15 18:14:01]     "exeErrorCode": 0,
[2024-05-15 18:14:01]     "exeErrorDiag": "",
[2024-05-15 18:14:01]     "pilotErrorCode": 0,
[2024-05-15 18:14:01]     "pilotErrorDiag": "",
[2024-05-15 18:14:01]  *** Listing of results directory ***
[2024-05-15 18:14:01] total 1477064
[2024-05-15 18:14:01] drwx------ 4 boinc boinc      4096 May  8 14:24 pilot3
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc    467845 May 13 11:19 pilot3.tar.gz
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc      5633 May 13 11:44 queuedata.json
[2024-05-15 18:14:01] -rwx------ 1 boinc boinc     32251 May 13 11:45 runpilot2-wrapper.sh
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc       100 May 15 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 18:14:01] -rwxr-xr-x 1 boinc boinc      7986 May 15 13:51 run_atlas
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc       105 May 15 13:51 job.xml
[2024-05-15 18:14:01] -rw-r--r-- 3 boinc boinc 615317518 May 15 13:51 EVNT.38776140._000133.pool.root.1
[2024-05-15 18:14:01] -rw-r--r-- 3 boinc boinc 615317518 May 15 13:51 ATLAS.root_0
[2024-05-15 18:14:01] -rw-r--r-- 2 boinc boinc     17537 May 15 13:51 start_atlas.sh
[2024-05-15 18:14:01] drwxrwx--x 2 boinc boinc      4096 May 15 13:51 shared
[2024-05-15 18:14:01] -rw-r--r-- 2 boinc boinc    479994 May 15 13:51 input.tar.gz
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc         0 May 15 13:51 boinc_lockfile
[2024-05-15 18:14:01] -rw------- 1 boinc boinc   1325758 May 15 13:52 cric_ddmendpoints.json
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc      2622 May 15 14:15 pandaJob.out
[2024-05-15 18:14:01] -rw------- 1 boinc boinc       424 May 15 14:15 setup.sh.local
[2024-05-15 18:14:01] -rw------- 1 boinc boinc   1010553 May 15 14:15 agis_schedconf.cvmfs.json
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc      6650 May 15 14:53 init_data.xml
[2024-05-15 18:14:01] -rw------- 1 boinc boinc 274671345 May 15 18:12 HITS.38776146._003318.pool.root.1
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc       531 May 15 18:13 boinc_task_state.xml
[2024-05-15 18:14:01] -rw------- 1 boinc boinc      1044 May 15 18:13 memory_monitor_summary.json
[2024-05-15 18:14:01] -rw------- 1 boinc boinc         0 May 15 18:13 agis_ddmendpoints.agis.ALL.json
[2024-05-15 18:14:01] -rw------- 1 boinc boinc    342848 May 15 18:13 log.38776146._003318.job.log.tgz.1
[2024-05-15 18:14:01] -rw------- 1 boinc boinc        97 May 15 18:13 pilot_heartbeat.json
[2024-05-15 18:14:01] -rw------- 1 boinc boinc      7718 May 15 18:13 heartbeat.json
[2024-05-15 18:14:01] -rw------- 1 boinc boinc      4294 May 15 18:14 pilotlog.txt
[2024-05-15 18:14:01] -rw------- 1 boinc boinc   1492557 May 15 18:14 log.38776146._003318.job.log.1
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc        28 May 15 18:14 wrapper_checkpoint.txt
[2024-05-15 18:14:01] -rw------- 1 boinc boinc       357 May 15 18:14 output.list
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc       620 May 15 18:14 runtime_log
[2024-05-15 18:14:01] -rw------- 1 boinc boinc   1853440 May 15 18:14 result.tar.gz
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc     11487 May 15 18:14 runtime_log.err
[2024-05-15 18:14:01] -rw------- 1 boinc boinc       771 May 15 18:14 AwwNDm5PhQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmYFKKDmMnkjtm.diag
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc      8192 May 15 18:14 boinc_mmap_file
[2024-05-15 18:14:01] -rw-r--r-- 1 boinc boinc     23197 May 15 18:14 stderr.txt
[2024-05-15 18:14:01] HITS file was successfully produced:
[2024-05-15 18:14:01] -rw------- 1 boinc boinc 274671345 May 15 18:12 shared/HITS.pool.root.1
[2024-05-15 18:14:01]  *** Contents of shared directory: ***
[2024-05-15 18:14:01] total 871448
[2024-05-15 18:14:01] -rw-r--r-- 3 boinc boinc 615317518 May 15 13:51 ATLAS.root_0
[2024-05-15 18:14:01] -rw-r--r-- 2 boinc boinc     17537 May 15 13:51 start_atlas.sh
[2024-05-15 18:14:01] -rw-r--r-- 2 boinc boinc    479994 May 15 13:51 input.tar.gz
[2024-05-15 18:14:01] -rw------- 1 boinc boinc 274671345 May 15 18:12 HITS.pool.root.1
[2024-05-15 18:14:01] -rw------- 1 boinc boinc   1853440 May 15 18:14 result.tar.gz
18:14:02 (3386787): run_atlas exited; CPU time 53457.125709
18:14:02 (3386787): called boinc_finish(0)

</stderr_txt>
]]>

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