Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:19:17 (3259617): wrapper (7.7.26015): starting
05:19:17 (3259617): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 05:19:17] Arguments: --nthreads 4
[2024-05-17 05:19:17] Threads: 4
[2024-05-17 05:19:17] Checking for CVMFS
[2024-05-17 05:19:17] No cvmfs_config command found, will try listing directly
[2024-05-17 05:19:17] CVMFS is ok
[2024-05-17 05:19:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 05:19:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 05:19:17] Further information can be found at the LHC@home message board.
[2024-05-17 05:19:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 05:19:17] Checking for apptainer binary...
[2024-05-17 05:19:17] which: no apptainer in ((null))
[2024-05-17 05:19:17] apptainer is not installed, using version from CVMFS
[2024-05-17 05:19:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 05:19:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-05-17 05:19:17] apptainer works
[2024-05-17 05:19:17] Set ATHENA_PROC_NUMBER=4
[2024-05-17 05:19:17] Set ATHENA_CORE_NUMBER=4
[2024-05-17 05:19:17] Starting ATLAS job with PandaID=6205823959
[2024-05-17 05:19:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 09:03:40]  *** The last 200 lines of the pilot log: ***
[2024-05-17 09:03:40] 2024-05-17 07:03:24,310 | INFO     | intersect: -18350484062.785465
[2024-05-17 09:03:40] 2024-05-17 07:03:24,311 | INFO     | chi2: 3.789343480375694
[2024-05-17 09:03:40] 2024-05-17 07:03:24,311 | INFO     | model: linear, x: [1715915986.0, 1715916047.0, 1715916108.0, 1715916169.0, 1715916230.0, 1715916291.0, 1715916352.0, 1715916413.0, 1715916474.0, 1715916535.0, 1715
[2024-05-17 09:03:40] 2024-05-17 07:03:24,311 | INFO     | sum of square deviations: 3081657780.0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,312 | INFO     | sum of deviations: 35011687124.000015
[2024-05-17 09:03:40] 2024-05-17 07:03:24,313 | INFO     | mean x: 1715922513.0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,313 | INFO     | mean y: 2343446.6883720933
[2024-05-17 09:03:40] 2024-05-17 07:03:24,313 | INFO     | -- intersect: -19492794054.979267
[2024-05-17 09:03:40] 2024-05-17 07:03:24,313 | INFO     | intersect: -19492794054.979267
[2024-05-17 09:03:40] 2024-05-17 07:03:24,313 | INFO     | chi2: 3.7935468644197616
[2024-05-17 09:03:40] 2024-05-17 07:03:24,313 | INFO     | current chi2=3.7935468644197616 (change=-0.11092644585628514 %)
[2024-05-17 09:03:40] 2024-05-17 07:03:24,313 | INFO     | right removable region: 214
[2024-05-17 09:03:40] 2024-05-17 07:03:24,314 | INFO     | model: linear, x: [1715916291.0, 1715916352.0, 1715916413.0, 1715916474.0, 1715916535.0, 1715916596.0, 1715916657.0, 1715916718.0, 1715916779.0, 1715916840.0, 1715
[2024-05-17 09:03:40] 2024-05-17 07:03:24,314 | INFO     | sum of square deviations: 3081657780.0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,315 | INFO     | sum of deviations: -12703376026.000015
[2024-05-17 09:03:40] 2024-05-17 07:03:24,315 | INFO     | mean x: 1715922818.0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,315 | INFO     | mean y: 2376826.1395348837
[2024-05-17 09:03:40] 2024-05-17 07:03:24,315 | INFO     | -- intersect: 7075846479.427119
[2024-05-17 09:03:40] 2024-05-17 07:03:24,315 | INFO     | intersect: 7075846479.427119
[2024-05-17 09:03:40] 2024-05-17 07:03:24,316 | INFO     | chi2: 1.475443228869126
[2024-05-17 09:03:40] 2024-05-17 07:03:24,316 | INFO     | current chi2=1.475443228869126 (change=61.06335473386954 %)
[2024-05-17 09:03:40] 2024-05-17 07:03:24,316 | INFO     | model: linear, x: [1715916596.0, 1715916657.0, 1715916718.0, 1715916779.0, 1715916840.0, 1715916901.0, 1715916962.0, 1715917023.0, 1715917084.0, 1715917145.0, 1715
[2024-05-17 09:03:40] 2024-05-17 07:03:24,316 | INFO     | sum of square deviations: 2871616632.5
[2024-05-17 09:03:40] 2024-05-17 07:03:24,317 | INFO     | sum of deviations: -49141610492.0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,317 | INFO     | mean x: 1715922970.5
[2024-05-17 09:03:40] 2024-05-17 07:03:24,317 | INFO     | mean y: 2403283.5904761907
[2024-05-17 09:03:40] 2024-05-17 07:03:24,317 | INFO     | -- intersect: 29366775009.34402
[2024-05-17 09:03:40] 2024-05-17 07:03:24,318 | INFO     | intersect: 29366775009.34402
[2024-05-17 09:03:40] 2024-05-17 07:03:24,318 | INFO     | chi2: 0.2298477443810637
[2024-05-17 09:03:40] 2024-05-17 07:03:24,318 | INFO     | current chi2=0.2298477443810637 (change=84.42178323884181 %)
[2024-05-17 09:03:40] 2024-05-17 07:03:24,318 | INFO     | model: linear, x: [1715916901.0, 1715916962.0, 1715917023.0, 1715917084.0, 1715917145.0, 1715917206.0, 1715917267.0, 1715917328.0, 1715917389.0, 1715917450.0, 1715
[2024-05-17 09:03:40] 2024-05-17 07:03:24,318 | INFO     | sum of square deviations: 2671343110.0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,319 | INFO     | sum of deviations: -51708653728.0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,319 | INFO     | mean x: 1715923123.0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,320 | INFO     | mean y: 2405176.0975609757
[2024-05-17 09:03:40] 2024-05-17 07:03:24,320 | INFO     | -- intersect: 33217185508.480755
[2024-05-17 09:03:40] 2024-05-17 07:03:24,320 | INFO     | intersect: 33217185508.480755
[2024-05-17 09:03:40] 2024-05-17 07:03:24,320 | INFO     | chi2: 0.16690505704619696
[2024-05-17 09:03:40] 2024-05-17 07:03:24,320 | INFO     | current chi2=0.16690505704619696 (change=27.384513824296793 %)
[2024-05-17 09:03:40] 2024-05-17 07:03:24,320 | INFO     | model: linear, x: [1715917206.0, 1715917267.0, 1715917328.0, 1715917389.0, 1715917450.0, 1715917511.0, 1715917572.0, 1715917633.0, 1715917694.0, 1715917755.0, 1715
[2024-05-17 09:03:40] 2024-05-17 07:03:24,321 | INFO     | sum of square deviations: 2480604650.0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,322 | INFO     | sum of deviations: -46027054893.5
[2024-05-17 09:03:40] 2024-05-17 07:03:24,322 | INFO     | mean x: 1715923275.5
[2024-05-17 09:03:40] 2024-05-17 07:03:24,322 | INFO     | mean y: 2400629.125
[2024-05-17 09:03:40] 2024-05-17 07:03:24,322 | INFO     | -- intersect: 31840966599.1085
[2024-05-17 09:03:40] 2024-05-17 07:03:24,322 | INFO     | intersect: 31840966599.1085
[2024-05-17 09:03:40] 2024-05-17 07:03:24,322 | INFO     | chi2: 0.16320830081469548
[2024-05-17 09:03:40] 2024-05-17 07:03:24,322 | INFO     | current chi2=0.16320830081469548 (change=2.214885694253273 %)
[2024-05-17 09:03:40] 2024-05-17 07:03:24,323 | INFO     | left removable region: 40
[2024-05-17 09:03:40] 2024-05-17 07:03:24,323 | INFO     | model: linear, x: [1715918426.0, 1715918487.0, 1715918548.0, 1715918609.0, 1715918670.0, 1715918731.0, 1715918792.0, 1715918853.0, 1715918914.0, 1715918975.0, 1715
[2024-05-17 09:03:40] 2024-05-17 07:03:24,323 | INFO     | sum of square deviations: 1633472487.5
[2024-05-17 09:03:40] 2024-05-17 07:03:24,324 | INFO     | sum of deviations: -18032182244.999992
[2024-05-17 09:03:40] 2024-05-17 07:03:24,324 | INFO     | mean x: 1715923702.5
[2024-05-17 09:03:40] 2024-05-17 07:03:24,324 | INFO     | mean y: 2376563.5057471264
[2024-05-17 09:03:40] 2024-05-17 07:03:24,324 | INFO     | -- intersect: 18944751876.6958
[2024-05-17 09:03:40] 2024-05-17 07:03:24,324 | INFO     | intersect: 18944751876.6958
[2024-05-17 09:03:40] 2024-05-17 07:03:24,324 | INFO     | chi2: 0.08866328694062989
[2024-05-17 09:03:40] 2024-05-17 07:03:24,324 | INFO     | -- intersect: 18944751876.6958
[2024-05-17 09:03:40] 2024-05-17 07:03:24,325 | INFO     | current memory leak: -11.04 B/s (using 174 data points, chi2=0.09)
[2024-05-17 09:03:40] 2024-05-17 07:03:24,325 | INFO     | ..............................
[2024-05-17 09:03:40] 2024-05-17 07:03:24,325 | INFO     | . Timing measurements:
[2024-05-17 09:03:40] 2024-05-17 07:03:24,325 | INFO     | . get job = 0 s
[2024-05-17 09:03:40] 2024-05-17 07:03:24,325 | INFO     | . initial setup = 1 s
[2024-05-17 09:03:40] 2024-05-17 07:03:24,325 | INFO     | . payload setup = 3 s
[2024-05-17 09:03:40] 2024-05-17 07:03:24,325 | INFO     | . stage-in = 0 s
[2024-05-17 09:03:40] 2024-05-17 07:03:24,325 | INFO     | . payload execution = 13410 s
[2024-05-17 09:03:40] 2024-05-17 07:03:24,325 | INFO     | . stage-out = 0 s
[2024-05-17 09:03:40] 2024-05-17 07:03:24,326 | INFO     | . log creation = 0 s
[2024-05-17 09:03:40] 2024-05-17 07:03:24,326 | INFO     | ..............................
[2024-05-17 09:03:40] 2024-05-17 07:03:24,392 | INFO     | 
[2024-05-17 09:03:40] 2024-05-17 07:03:24,392 | INFO     | job summary report
[2024-05-17 09:03:40] 2024-05-17 07:03:24,392 | INFO     | --------------------------------------------------
[2024-05-17 09:03:40] 2024-05-17 07:03:24,392 | INFO     | PanDA job id: 6205823959
[2024-05-17 09:03:40] 2024-05-17 07:03:24,392 | INFO     | task id: 38776146
[2024-05-17 09:03:40] 2024-05-17 07:03:24,392 | INFO     | errors: (none)
[2024-05-17 09:03:40] 2024-05-17 07:03:24,393 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 09:03:40] 2024-05-17 07:03:24,393 | INFO     | pilot state: finished 
[2024-05-17 09:03:40] 2024-05-17 07:03:24,393 | INFO     | transexitcode: 0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,393 | INFO     | exeerrorcode: 0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,393 | INFO     | exeerrordiag: 
[2024-05-17 09:03:40] 2024-05-17 07:03:24,393 | INFO     | exitcode: 0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,393 | INFO     | exitmsg: OK
[2024-05-17 09:03:40] 2024-05-17 07:03:24,393 | INFO     | cpuconsumptiontime: 50588 s
[2024-05-17 09:03:40] 2024-05-17 07:03:24,394 | INFO     | nevents: 400
[2024-05-17 09:03:40] 2024-05-17 07:03:24,394 | INFO     | neventsw: 0
[2024-05-17 09:03:40] 2024-05-17 07:03:24,394 | INFO     | pid: 3270693
[2024-05-17 09:03:40] 2024-05-17 07:03:24,394 | INFO     | pgrp: 3270693
[2024-05-17 09:03:40] 2024-05-17 07:03:24,394 | INFO     | corecount: 4
[2024-05-17 09:03:40] 2024-05-17 07:03:24,394 | INFO     | event service: False
[2024-05-17 09:03:40] 2024-05-17 07:03:24,394 | INFO     | sizes: {0: 2391287, 1: 2392222, 4: 2392428, 11: 2392456, 13418: 2422902, 13419: 2431884, 13421: 2432068, 13426: 2432238}
[2024-05-17 09:03:40] 2024-05-17 07:03:24,394 | INFO     | --------------------------------------------------
[2024-05-17 09:03:40] 2024-05-17 07:03:24,395 | INFO     | 
[2024-05-17 09:03:40] 2024-05-17 07:03:24,395 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-05-17 09:03:40] 2024-05-17 07:03:24,416 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,416 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,416 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,417 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,418 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 09:03:40] 2024-05-17 07:03:24,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,419 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 09:03:40] 2024-05-17 07:03:24,419 | INFO     | job 6205823959 has completed (purged errors)
[2024-05-17 09:03:40] 2024-05-17 07:03:24,419 | INFO     | overall cleanup function is called
[2024-05-17 09:03:40] 2024-05-17 07:03:25,427 | INFO     | --- collectZombieJob: --- 10, [3270693]
[2024-05-17 09:03:40] 2024-05-17 07:03:25,427 | INFO     | zombie collector waiting for pid 3270693
[2024-05-17 09:03:40] 2024-05-17 07:03:25,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 09:03:40] 2024-05-17 07:03:26,432 | INFO     | collected zombie processes
[2024-05-17 09:03:40] 2024-05-17 07:03:26,433 | INFO     | will now attempt to kill all subprocesses of pid=3270693
[2024-05-17 09:03:40] 2024-05-17 07:03:26,537 | INFO     | process IDs to be killed: [3270693] (in reverse order)
[2024-05-17 09:03:40] 2024-05-17 07:03:26,630 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 09:03:40] 2024-05-17 07:03:26,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 09:03:40] 2024-05-17 07:03:26,638 | INFO     | did not find any defunct processes belonging to 3270693
[2024-05-17 09:03:40] 2024-05-17 07:03:26,644 | INFO     | did not find any defunct processes belonging to 3270693
[2024-05-17 09:03:40] 2024-05-17 07:03:26,644 | INFO     | ready for new job
[2024-05-17 09:03:40] 2024-05-17 07:03:26,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 09:03:40] 2024-05-17 07:03:26,646 | INFO     | *************************************
[2024-05-17 09:03:40] 2024-05-17 07:03:26,646 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 09:03:40] 2024-05-17 07:03:26,646 | INFO     | *************************************
[2024-05-17 09:03:40] 2024-05-17 07:03:26,646 | INFO     | 
[2024-05-17 09:03:40] 2024-05-17 07:03:26,648 | INFO     | architecture information:
[2024-05-17 09:03:40] 2024-05-17 07:03:26,649 | INFO     | executing command: cat /etc/os-release
[2024-05-17 09:03:40] 2024-05-17 07:03:26,662 | INFO     | cat /etc/os-release:
[2024-05-17 09:03:40] NAME="CentOS Linux"
[2024-05-17 09:03:40] VERSION="7 (Core)"
[2024-05-17 09:03:40] ID="centos"
[2024-05-17 09:03:40] ID_LIKE="rhel fedora"
[2024-05-17 09:03:40] VERSION_ID="7"
[2024-05-17 09:03:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 09:03:40] ANSI_COLOR="0;31"
[2024-05-17 09:03:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 09:03:40] HOME_URL="https://www.centos.org/"
[2024-05-17 09:03:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 09:03:40] 
[2024-05-17 09:03:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 09:03:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 09:03:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 09:03:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 09:03:40] 
[2024-05-17 09:03:40] 2024-05-17 07:03:26,662 | INFO     | *************************************
[2024-05-17 09:03:40] 2024-05-17 07:03:27,165 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-05-17 09:03:40] 2024-05-17 07:03:27,184 | INFO     | sufficient remaining disk space (1595220688896 B)
[2024-05-17 09:03:40] 2024-05-17 07:03:27,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 09:03:40] 2024-05-17 07:03:27,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 09:03:40] 2024-05-17 07:03:27,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:03:40] 2024-05-17 07:03:27,185 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 09:03:40] 2024-05-17 07:03:27,185 | INFO     | aborting loop
[2024-05-17 09:03:40] 2024-05-17 07:03:27,186 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 09:03:40] 2024-05-17 07:03:27,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 09:03:40] 2024-05-17 07:03:27,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 09:03:40] 2024-05-17 07:03:27,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 09:03:40] 2024-05-17 07:03:27,829 | INFO     | all job control threads have been joined
[2024-05-17 09:03:40] 2024-05-17 07:03:27,927 | INFO     | all payload control threads have been joined
[2024-05-17 09:03:40] 2024-05-17 07:03:28,145 | INFO     | all data control threads have been joined
[2024-05-17 09:03:40] 2024-05-17 07:03:28,190 | INFO     | [job] retrieve thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:28,191 | INFO     | [job] job monitor thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:28,254 | INFO     | [data] copytool_in thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:28,346 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:28,592 | INFO     | [payload] validate_post thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:28,834 | INFO     | [job] control thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:28,933 | INFO     | [payload] control thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:29,147 | INFO     | [data] control thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:29,259 | INFO     | [payload] failed_post thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:29,350 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:29,388 | INFO     | [job] validate thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:29,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:03:40] 2024-05-17 07:03:29,497 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:29,541 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:29,816 | INFO     | [data] copytool_out thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:30,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 09:03:40] 2024-05-17 07:03:30,407 | INFO     | [job] queue monitor thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:34,311 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 09:03:40] 2024-05-17 07:03:34,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47749356155968)>', '<ExcThread(monitor, started 47749533710080)>']
[2024-05-17 09:03:40] 2024-05-17 07:03:35,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 09:03:40] 2024-05-17 07:03:35,225 | INFO     | [monitor] control thread has ended
[2024-05-17 09:03:40] 2024-05-17 07:03:39,945 | INFO     | all workflow threads have been joined
[2024-05-17 09:03:40] 2024-05-17 07:03:39,945 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 09:03:40] 2024-05-17 07:03:39,946 | INFO     | traces error code: 0
[2024-05-17 09:03:40] 2024-05-17 07:03:39,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 09:03:40] 2024-05-17 07:03:40,023 [wrapper] ==== pilot stdout END ====
[2024-05-17 09:03:40] 2024-05-17 07:03:40,025 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 09:03:40] 2024-05-17 07:03:40,027 [wrapper] pilotpid: 3263836
[2024-05-17 09:03:40] 2024-05-17 07:03:40,029 [wrapper] Pilot exit status: 0
[2024-05-17 09:03:40] 2024-05-17 07:03:40,036 [wrapper] pandaids: 6205823959
[2024-05-17 09:03:40] 2024-05-17 07:03:40,097 [wrapper] cleanup: SIGTERM to supervisor_pilot 3516524 3263837
[2024-05-17 09:03:40] 2024-05-17 07:03:40,100 [wrapper] Test setup, not cleaning
[2024-05-17 09:03:40] 2024-05-17 07:03:40,103 [wrapper] ==== wrapper stdout END ====
[2024-05-17 09:03:40] 2024-05-17 07:03:40,105 [wrapper] ==== wrapper stderr END ====
[2024-05-17 09:03:40] 2024-05-17 07:03:40,110 [wrapper] apfmon messages muted
[2024-05-17 09:03:40]  *** Error codes and diagnostics ***
[2024-05-17 09:03:40]     "exeErrorCode": 0,
[2024-05-17 09:03:40]     "exeErrorDiag": "",
[2024-05-17 09:03:40]     "pilotErrorCode": 0,
[2024-05-17 09:03:40]     "pilotErrorDiag": "",
[2024-05-17 09:03:40]  *** Listing of results directory ***
[2024-05-17 09:03:40] total 869496
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc    467845 May 13 11:19 pilot3.tar.gz
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc      5633 May 13 11:41 queuedata.json
[2024-05-17 09:03:40] -rwx------ 1 boinc boinc     32251 May 13 11:42 runpilot2-wrapper.sh
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc       100 May 17 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 09:03:40] -rwxr-xr-x 1 boinc boinc      7986 May 17 04:18 run_atlas
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc       105 May 17 04:18 job.xml
[2024-05-17 09:03:40] -rw-r--r-- 2 boinc boinc 613228749 May 17 05:19 EVNT.38776140._000114.pool.root.1
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc      6457 May 17 05:19 init_data.xml
[2024-05-17 09:03:40] -rw-r--r-- 2 boinc boinc     17537 May 17 05:19 start_atlas.sh
[2024-05-17 09:03:40] drwxrwx--x 2 boinc boinc      4096 May 17 05:19 shared
[2024-05-17 09:03:40] -rw-r--r-- 2 boinc boinc    479990 May 17 05:19 input.tar.gz
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc         0 May 17 05:19 boinc_lockfile
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc      2622 May 17 05:19 pandaJob.out
[2024-05-17 09:03:40] -rw------- 1 boinc boinc       424 May 17 05:19 setup.sh.local
[2024-05-17 09:03:40] -rw------- 1 boinc boinc   1019372 May 17 05:19 agis_schedconf.cvmfs.json
[2024-05-17 09:03:40] -rw------- 1 boinc boinc   1324701 May 17 05:19 cric_ddmendpoints.json
[2024-05-17 09:03:40] drwx------ 4 boinc boinc      4096 May 17 05:19 pilot3
[2024-05-17 09:03:40] -rw------- 1 boinc boinc 270030869 May 17 09:02 HITS.38776146._002837.pool.root.1
[2024-05-17 09:03:40] -rw------- 1 boinc boinc        95 May 17 09:02 pilot_heartbeat.json
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc       531 May 17 09:03 boinc_task_state.xml
[2024-05-17 09:03:40] -rw------- 1 boinc boinc      1051 May 17 09:03 memory_monitor_summary.json
[2024-05-17 09:03:40] -rw------- 1 boinc boinc         0 May 17 09:03 agis_ddmendpoints.agis.ALL.json
[2024-05-17 09:03:40] -rw------- 1 boinc boinc    328053 May 17 09:03 log.38776146._002837.job.log.tgz.1
[2024-05-17 09:03:40] -rw------- 1 boinc boinc      7775 May 17 09:03 heartbeat.json
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc        28 May 17 09:03 wrapper_checkpoint.txt
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc      8192 May 17 09:03 boinc_mmap_file
[2024-05-17 09:03:40] -rw------- 1 boinc boinc      4345 May 17 09:03 pilotlog.txt
[2024-05-17 09:03:40] -rw------- 1 boinc boinc   1456173 May 17 09:03 log.38776146._002837.job.log.1
[2024-05-17 09:03:40] -rw------- 1 boinc boinc       357 May 17 09:03 output.list
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc       620 May 17 09:03 runtime_log
[2024-05-17 09:03:40] -rw------- 1 boinc boinc   1802240 May 17 09:03 result.tar.gz
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc     11410 May 17 09:03 runtime_log.err
[2024-05-17 09:03:40] -rw------- 1 boinc boinc       659 May 17 09:03 HzNLDmONhQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmyEKKDmxImgLo.diag
[2024-05-17 09:03:40] -rw-r--r-- 1 boinc boinc     21346 May 17 09:03 stderr.txt
[2024-05-17 09:03:40] HITS file was successfully produced:
[2024-05-17 09:03:40] -rw------- 1 boinc boinc 270030869 May 17 09:02 shared/HITS.pool.root.1
[2024-05-17 09:03:40]  *** Contents of shared directory: ***
[2024-05-17 09:03:40] total 864824
[2024-05-17 09:03:40] -rw-r--r-- 2 boinc boinc 613228749 May 17 05:19 ATLAS.root_0
[2024-05-17 09:03:40] -rw-r--r-- 2 boinc boinc     17537 May 17 05:19 start_atlas.sh
[2024-05-17 09:03:40] -rw-r--r-- 2 boinc boinc    479990 May 17 05:19 input.tar.gz
[2024-05-17 09:03:40] -rw------- 1 boinc boinc 270030869 May 17 09:02 HITS.pool.root.1
[2024-05-17 09:03:40] -rw------- 1 boinc boinc   1802240 May 17 09:03 result.tar.gz
09:03:42 (3259617): run_atlas exited; CPU time 50318.376624
09:03:42 (3259617): called boinc_finish(0)

</stderr_txt>
]]>

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