Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:45:44 (2153218): wrapper (7.7.26015): starting
10:45:44 (2153218): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 10:45:44] Arguments: --nthreads 4
[2024-05-16 10:45:44] Threads: 4
[2024-05-16 10:45:44] Checking for CVMFS
[2024-05-16 10:45:44] No cvmfs_config command found, will try listing directly
[2024-05-16 10:45:44] CVMFS is ok
[2024-05-16 10:45:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 10:45:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 10:45:44] Further information can be found at the LHC@home message board.
[2024-05-16 10:45:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 10:45:44] Checking for apptainer binary...
[2024-05-16 10:45:44] which: no apptainer in ((null))
[2024-05-16 10:45:44] apptainer is not installed, using version from CVMFS
[2024-05-16 10:45:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 10:45:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-05-16 10:45:45] apptainer works
[2024-05-16 10:45:45] Set ATHENA_PROC_NUMBER=4
[2024-05-16 10:45:45] Set ATHENA_CORE_NUMBER=4
[2024-05-16 10:45:45] Starting ATLAS job with PandaID=6205822129
[2024-05-16 10:45:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 16:47:56]  *** The last 200 lines of the pilot log: ***
[2024-05-16 16:47:56] 2024-05-16 14:47:42,139 | WARNING  | GPU info not found in prmon json
[2024-05-16 16:47:56] 2024-05-16 14:47:42,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 16:47:56] 2024-05-16 14:47:42,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 16:47:56] 2024-05-16 14:47:42,144 | INFO     | fitting pss+swap vs Time
[2024-05-16 16:47:56] 2024-05-16 14:47:42,144 | INFO     | model: linear, x: [1715849181.0, 1715849242.0, 1715849303.0, 1715849364.0, 1715849425.0, 1715849486.0, 1715849547.0, 1715849608.0, 1715849669.0, 1715849730.0, 1715
[2024-05-16 16:47:56] 2024-05-16 14:47:42,144 | INFO     | sum of square deviations: 13990234405.0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,146 | INFO     | sum of deviations: 113608233385.50002
[2024-05-16 16:47:56] 2024-05-16 14:47:42,147 | INFO     | mean x: 1715860008.5
[2024-05-16 16:47:56] 2024-05-16 14:47:42,147 | INFO     | mean y: 2311575.941011236
[2024-05-16 16:47:56] 2024-05-16 14:47:42,147 | INFO     | -- intersect: -13931395226.916096
[2024-05-16 16:47:56] 2024-05-16 14:47:42,147 | INFO     | intersect: -13931395226.916096
[2024-05-16 16:47:56] 2024-05-16 14:47:42,147 | INFO     | chi2: 4.065676195732894
[2024-05-16 16:47:56] 2024-05-16 14:47:42,148 | INFO     | model: linear, x: [1715849181.0, 1715849242.0, 1715849303.0, 1715849364.0, 1715849425.0, 1715849486.0, 1715849547.0, 1715849608.0, 1715849669.0, 1715849730.0, 1715
[2024-05-16 16:47:56] 2024-05-16 14:47:42,148 | INFO     | sum of square deviations: 13408995600.0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,150 | INFO     | sum of deviations: 133540515275.00002
[2024-05-16 16:47:56] 2024-05-16 14:47:42,150 | INFO     | mean x: 1715859856.0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,150 | INFO     | mean y: 2316739.9772079773
[2024-05-16 16:47:56] 2024-05-16 14:47:42,150 | INFO     | -- intersect: -17085973550.007475
[2024-05-16 16:47:56] 2024-05-16 14:47:42,150 | INFO     | intersect: -17085973550.007475
[2024-05-16 16:47:56] 2024-05-16 14:47:42,150 | INFO     | chi2: 3.320773765792689
[2024-05-16 16:47:56] 2024-05-16 14:47:42,151 | INFO     | current chi2=3.320773765792689 (change=18.321735280394755 %)
[2024-05-16 16:47:56] 2024-05-16 14:47:42,151 | INFO     | right removable region: 350
[2024-05-16 16:47:56] 2024-05-16 14:47:42,151 | INFO     | model: linear, x: [1715849486.0, 1715849547.0, 1715849608.0, 1715849669.0, 1715849730.0, 1715849791.0, 1715849852.0, 1715849913.0, 1715849974.0, 1715850035.0, 1715
[2024-05-16 16:47:56] 2024-05-16 14:47:42,151 | INFO     | sum of square deviations: 13408995600.0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,153 | INFO     | sum of deviations: 36024477627.0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,153 | INFO     | mean x: 1715860161.0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,153 | INFO     | mean y: 2331887.5185185187
[2024-05-16 16:47:56] 2024-05-16 14:47:42,153 | INFO     | -- intersect: -4607481391.934353
[2024-05-16 16:47:56] 2024-05-16 14:47:42,154 | INFO     | intersect: -4607481391.934353
[2024-05-16 16:47:56] 2024-05-16 14:47:42,154 | INFO     | chi2: 1.8912027433360055
[2024-05-16 16:47:56] 2024-05-16 14:47:42,154 | INFO     | current chi2=1.8912027433360055 (change=53.483685067667075 %)
[2024-05-16 16:47:56] 2024-05-16 14:47:42,154 | INFO     | model: linear, x: [1715849791.0, 1715849852.0, 1715849913.0, 1715849974.0, 1715850035.0, 1715850096.0, 1715850157.0, 1715850218.0, 1715850279.0, 1715850340.0, 1715
[2024-05-16 16:47:56] 2024-05-16 14:47:42,154 | INFO     | sum of square deviations: 12844082682.5
[2024-05-16 16:47:56] 2024-05-16 14:47:42,156 | INFO     | sum of deviations: -21000629972.499996
[2024-05-16 16:47:56] 2024-05-16 14:47:42,157 | INFO     | mean x: 1715860313.5
[2024-05-16 16:47:56] 2024-05-16 14:47:42,157 | INFO     | mean y: 2347281.465317919
[2024-05-16 16:47:56] 2024-05-16 14:47:42,157 | INFO     | -- intersect: 2807853008.815367
[2024-05-16 16:47:56] 2024-05-16 14:47:42,157 | INFO     | intersect: 2807853008.815367
[2024-05-16 16:47:56] 2024-05-16 14:47:42,157 | INFO     | chi2: 0.8353690017231865
[2024-05-16 16:47:56] 2024-05-16 14:47:42,157 | INFO     | current chi2=0.8353690017231865 (change=55.82869130944527 %)
[2024-05-16 16:47:56] 2024-05-16 14:47:42,158 | INFO     | model: linear, x: [1715850096.0, 1715850157.0, 1715850218.0, 1715850279.0, 1715850340.0, 1715850401.0, 1715850462.0, 1715850523.0, 1715850584.0, 1715850645.0, 1715
[2024-05-16 16:47:56] 2024-05-16 14:47:42,158 | INFO     | sum of square deviations: 12295263090.0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,160 | INFO     | sum of deviations: -25276577136.999996
[2024-05-16 16:47:56] 2024-05-16 14:47:42,160 | INFO     | mean x: 1715860466.0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,160 | INFO     | mean y: 2348451.3724340177
[2024-05-16 16:47:56] 2024-05-16 14:47:42,160 | INFO     | -- intersect: 3529810947.108079
[2024-05-16 16:47:56] 2024-05-16 14:47:42,160 | INFO     | intersect: 3529810947.108079
[2024-05-16 16:47:56] 2024-05-16 14:47:42,160 | INFO     | chi2: 0.8010098257352708
[2024-05-16 16:47:56] 2024-05-16 14:47:42,161 | INFO     | current chi2=0.8010098257352708 (change=4.113053742362971 %)
[2024-05-16 16:47:56] 2024-05-16 14:47:42,161 | INFO     | left removable region: 30
[2024-05-16 16:47:56] 2024-05-16 14:47:42,161 | INFO     | model: linear, x: [1715851011.0, 1715851072.0, 1715851133.0, 1715851194.0, 1715851255.0, 1715851316.0, 1715851377.0, 1715851438.0, 1715851499.0, 1715851560.0, 1715
[2024-05-16 16:47:56] 2024-05-16 14:47:42,161 | INFO     | sum of square deviations: 10160711440.0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,163 | INFO     | sum of deviations: 11735640580.499998
[2024-05-16 16:47:56] 2024-05-16 14:47:42,163 | INFO     | mean x: 1715860740.5
[2024-05-16 16:47:56] 2024-05-16 14:47:42,163 | INFO     | mean y: 2349451.884375
[2024-05-16 16:47:56] 2024-05-16 14:47:42,163 | INFO     | -- intersect: -1979472889.5538123
[2024-05-16 16:47:56] 2024-05-16 14:47:42,163 | INFO     | intersect: -1979472889.5538123
[2024-05-16 16:47:56] 2024-05-16 14:47:42,164 | INFO     | chi2: 0.0005899532160545534
[2024-05-16 16:47:56] 2024-05-16 14:47:42,164 | INFO     | -- intersect: -1979472889.5538123
[2024-05-16 16:47:56] 2024-05-16 14:47:42,164 | INFO     | current memory leak: 1.16 B/s (using 320 data points, chi2=0.00)
[2024-05-16 16:47:56] 2024-05-16 14:47:42,164 | INFO     | ..............................
[2024-05-16 16:47:56] 2024-05-16 14:47:42,164 | INFO     | . Timing measurements:
[2024-05-16 16:47:56] 2024-05-16 14:47:42,164 | INFO     | . get job = 0 s
[2024-05-16 16:47:56] 2024-05-16 14:47:42,165 | INFO     | . initial setup = 1 s
[2024-05-16 16:47:56] 2024-05-16 14:47:42,165 | INFO     | . payload setup = 5 s
[2024-05-16 16:47:56] 2024-05-16 14:47:42,165 | INFO     | . stage-in = 0 s
[2024-05-16 16:47:56] 2024-05-16 14:47:42,165 | INFO     | . payload execution = 21677 s
[2024-05-16 16:47:56] 2024-05-16 14:47:42,165 | INFO     | . stage-out = 0 s
[2024-05-16 16:47:56] 2024-05-16 14:47:42,165 | INFO     | . log creation = 0 s
[2024-05-16 16:47:56] 2024-05-16 14:47:42,165 | INFO     | ..............................
[2024-05-16 16:47:56] 2024-05-16 14:47:42,230 | INFO     | 
[2024-05-16 16:47:56] 2024-05-16 14:47:42,230 | INFO     | job summary report
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | --------------------------------------------------
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | PanDA job id: 6205822129
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | task id: 38776146
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | errors: (none)
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | pilot state: finished 
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | transexitcode: 0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | exeerrorcode: 0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | exeerrordiag: 
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | exitcode: 0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | exitmsg: OK
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | cpuconsumptiontime: 83472 s
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | nevents: 400
[2024-05-16 16:47:56] 2024-05-16 14:47:42,231 | INFO     | neventsw: 0
[2024-05-16 16:47:56] 2024-05-16 14:47:42,232 | INFO     | pid: 2164318
[2024-05-16 16:47:56] 2024-05-16 14:47:42,232 | INFO     | pgrp: 2164318
[2024-05-16 16:47:56] 2024-05-16 14:47:42,232 | INFO     | corecount: 4
[2024-05-16 16:47:56] 2024-05-16 14:47:42,232 | INFO     | event service: False
[2024-05-16 16:47:56] 2024-05-16 14:47:42,232 | INFO     | sizes: {0: 2392021, 1: 2392220, 5: 2392426, 11: 2392482, 21687: 2426539, 21688: 2435521, 21689: 2435705, 21692: 2435875}
[2024-05-16 16:47:56] 2024-05-16 14:47:42,232 | INFO     | --------------------------------------------------
[2024-05-16 16:47:56] 2024-05-16 14:47:42,232 | INFO     | 
[2024-05-16 16:47:56] 2024-05-16 14:47:42,232 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2024-05-16 16:47:56] 2024-05-16 14:47:42,248 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,248 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,248 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,248 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 16:47:56] 2024-05-16 14:47:42,249 | INFO     | job 6205822129 has completed (purged errors)
[2024-05-16 16:47:56] 2024-05-16 14:47:42,250 | INFO     | overall cleanup function is called
[2024-05-16 16:47:56] 2024-05-16 14:47:43,256 | INFO     | --- collectZombieJob: --- 10, [2164318]
[2024-05-16 16:47:56] 2024-05-16 14:47:43,257 | INFO     | zombie collector waiting for pid 2164318
[2024-05-16 16:47:56] 2024-05-16 14:47:43,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 16:47:56] 2024-05-16 14:47:44,261 | INFO     | collected zombie processes
[2024-05-16 16:47:56] 2024-05-16 14:47:44,262 | INFO     | will now attempt to kill all subprocesses of pid=2164318
[2024-05-16 16:47:56] 2024-05-16 14:47:44,385 | INFO     | process IDs to be killed: [2164318] (in reverse order)
[2024-05-16 16:47:56] 2024-05-16 14:47:44,460 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 16:47:56] 2024-05-16 14:47:44,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 16:47:56] 2024-05-16 14:47:44,465 | INFO     | did not find any defunct processes belonging to 2164318
[2024-05-16 16:47:56] 2024-05-16 14:47:44,469 | INFO     | did not find any defunct processes belonging to 2164318
[2024-05-16 16:47:56] 2024-05-16 14:47:44,469 | INFO     | ready for new job
[2024-05-16 16:47:56] 2024-05-16 14:47:44,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 16:47:56] 2024-05-16 14:47:44,470 | INFO     | *************************************
[2024-05-16 16:47:56] 2024-05-16 14:47:44,471 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 16:47:56] 2024-05-16 14:47:44,471 | INFO     | *************************************
[2024-05-16 16:47:56] 2024-05-16 14:47:44,471 | INFO     | 
[2024-05-16 16:47:56] 2024-05-16 14:47:44,472 | INFO     | architecture information:
[2024-05-16 16:47:56] 2024-05-16 14:47:44,472 | INFO     | executing command: cat /etc/os-release
[2024-05-16 16:47:56] 2024-05-16 14:47:44,484 | INFO     | cat /etc/os-release:
[2024-05-16 16:47:56] NAME="CentOS Linux"
[2024-05-16 16:47:56] VERSION="7 (Core)"
[2024-05-16 16:47:56] ID="centos"
[2024-05-16 16:47:56] ID_LIKE="rhel fedora"
[2024-05-16 16:47:56] VERSION_ID="7"
[2024-05-16 16:47:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 16:47:56] ANSI_COLOR="0;31"
[2024-05-16 16:47:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 16:47:56] HOME_URL="https://www.centos.org/"
[2024-05-16 16:47:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 16:47:56] 
[2024-05-16 16:47:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 16:47:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 16:47:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 16:47:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 16:47:56] 
[2024-05-16 16:47:56] 2024-05-16 14:47:44,484 | INFO     | *************************************
[2024-05-16 16:47:56] 2024-05-16 14:47:44,987 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2024-05-16 16:47:56] 2024-05-16 14:47:45,002 | INFO     | sufficient remaining disk space (1603674308608 B)
[2024-05-16 16:47:56] 2024-05-16 14:47:45,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 16:47:56] 2024-05-16 14:47:45,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 16:47:56] 2024-05-16 14:47:45,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 16:47:56] 2024-05-16 14:47:45,306 | INFO     | all payload control threads have been joined
[2024-05-16 16:47:56] 2024-05-16 14:47:45,409 | INFO     | all job control threads have been joined
[2024-05-16 16:47:56] 2024-05-16 14:47:45,781 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 16:47:56] 2024-05-16 14:47:45,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 16:47:56] 2024-05-16 14:47:45,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 16:47:56] 2024-05-16 14:47:45,863 | INFO     | all data control threads have been joined
[2024-05-16 16:47:56] 2024-05-16 14:47:45,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 16:47:56] 2024-05-16 14:47:45,914 | INFO     | aborting loop
[2024-05-16 16:47:56] 2024-05-16 14:47:46,008 | INFO     | [job] retrieve thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,014 | INFO     | [payload] failed_post thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 16:47:56] 2024-05-16 14:47:46,225 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,312 | INFO     | [payload] control thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,415 | INFO     | [job] control thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,426 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,652 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,714 | INFO     | [data] copytool_in thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,862 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,867 | INFO     | [data] control thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:46,919 | INFO     | [job] job monitor thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:47,039 | INFO     | [job] validate thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:47,125 | INFO     | [payload] validate_post thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:47,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 16:47:56] 2024-05-16 14:47:48,102 | INFO     | [data] copytool_out thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:48,245 | INFO     | [job] queue monitor thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:49,008 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 16:47:56] 2024-05-16 14:47:51,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47501960967232)>', '<ExcThread(monitor, started 47502132217600)>']
[2024-05-16 16:47:56] 2024-05-16 14:47:51,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 16:47:56] 2024-05-16 14:47:51,812 | INFO     | [monitor] control thread has ended
[2024-05-16 16:47:56] 2024-05-16 14:47:56,040 | INFO     | all workflow threads have been joined
[2024-05-16 16:47:56] 2024-05-16 14:47:56,041 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 16:47:56] 2024-05-16 14:47:56,041 | INFO     | traces error code: 0
[2024-05-16 16:47:56] 2024-05-16 14:47:56,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 16:47:56] 2024-05-16 14:47:56,100 [wrapper] ==== pilot stdout END ====
[2024-05-16 16:47:56] 2024-05-16 14:47:56,103 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 16:47:56] 2024-05-16 14:47:56,105 [wrapper] pilotpid: 2157437
[2024-05-16 16:47:56] 2024-05-16 14:47:56,107 [wrapper] Pilot exit status: 0
[2024-05-16 16:47:56] 2024-05-16 14:47:56,161 [wrapper] pandaids: 6205822129
[2024-05-16 16:47:56] 2024-05-16 14:47:56,250 [wrapper] cleanup: SIGTERM to supervisor_pilot 2709215 2157438
[2024-05-16 16:47:56] 2024-05-16 14:47:56,252 [wrapper] Test setup, not cleaning
[2024-05-16 16:47:56] 2024-05-16 14:47:56,254 [wrapper] ==== wrapper stdout END ====
[2024-05-16 16:47:56] 2024-05-16 14:47:56,256 [wrapper] ==== wrapper stderr END ====
[2024-05-16 16:47:56] 2024-05-16 14:47:56,260 [wrapper] apfmon messages muted
[2024-05-16 16:47:56]  *** Error codes and diagnostics ***
[2024-05-16 16:47:56]     "exeErrorCode": 0,
[2024-05-16 16:47:56]     "exeErrorDiag": "",
[2024-05-16 16:47:56]     "pilotErrorCode": 0,
[2024-05-16 16:47:56]     "pilotErrorDiag": "",
[2024-05-16 16:47:56]  *** Listing of results directory ***
[2024-05-16 16:47:56] total 874676
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc    467845 May 13 11:19 pilot3.tar.gz
[2024-05-16 16:47:56] -rwx------ 1 boinc boinc     32251 May 13 11:40 runpilot2-wrapper.sh
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc      5633 May 13 11:40 queuedata.json
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc       100 May 16 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 16:47:56] -rwxr-xr-x 1 boinc boinc      7986 May 16 10:45 run_atlas
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc       105 May 16 10:45 job.xml
[2024-05-16 16:47:56] -rw-r--r-- 2 boinc boinc 613502439 May 16 10:45 EVNT.38776140._000097.pool.root.1
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc      6456 May 16 10:45 init_data.xml
[2024-05-16 16:47:56] -rw-r--r-- 2 boinc boinc     17537 May 16 10:45 start_atlas.sh
[2024-05-16 16:47:56] drwxrwx--x 2 boinc boinc      4096 May 16 10:45 shared
[2024-05-16 16:47:56] -rw-r--r-- 2 boinc boinc    479994 May 16 10:45 input.tar.gz
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc         0 May 16 10:45 boinc_lockfile
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc      2621 May 16 10:45 pandaJob.out
[2024-05-16 16:47:56] -rw------- 1 boinc boinc       424 May 16 10:45 setup.sh.local
[2024-05-16 16:47:56] -rw------- 1 boinc boinc   1010257 May 16 10:45 agis_schedconf.cvmfs.json
[2024-05-16 16:47:56] -rw------- 1 boinc boinc   1324701 May 16 10:45 cric_ddmendpoints.json
[2024-05-16 16:47:56] drwx------ 4 boinc boinc      4096 May 16 10:45 pilot3
[2024-05-16 16:47:56] -rw------- 1 boinc boinc 273006409 May 16 16:47 HITS.38776146._002413.pool.root.1
[2024-05-16 16:47:56] -rw------- 1 boinc boinc        95 May 16 16:47 pilot_heartbeat.json
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc       532 May 16 16:47 boinc_task_state.xml
[2024-05-16 16:47:56] -rw------- 1 boinc boinc      1047 May 16 16:47 memory_monitor_summary.json
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc        28 May 16 16:47 wrapper_checkpoint.txt
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc      8192 May 16 16:47 boinc_mmap_file
[2024-05-16 16:47:56] -rw------- 1 boinc boinc         0 May 16 16:47 agis_ddmendpoints.agis.ALL.json
[2024-05-16 16:47:56] -rw------- 1 boinc boinc    419549 May 16 16:47 log.38776146._002413.job.log.tgz.1
[2024-05-16 16:47:56] -rw------- 1 boinc boinc      7764 May 16 16:47 heartbeat.json
[2024-05-16 16:47:56] -rw------- 1 boinc boinc      4222 May 16 16:47 pilotlog.txt
[2024-05-16 16:47:56] -rw------- 1 boinc boinc   2397487 May 16 16:47 log.38776146._002413.job.log.1
[2024-05-16 16:47:56] -rw------- 1 boinc boinc       357 May 16 16:47 output.list
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc       620 May 16 16:47 runtime_log
[2024-05-16 16:47:56] -rw------- 1 boinc boinc   2836480 May 16 16:47 result.tar.gz
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc     11410 May 16 16:47 runtime_log.err
[2024-05-16 16:47:56] -rw------- 1 boinc boinc       659 May 16 16:47 G2yNDmDLhQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmhEKKDmYBO00n.diag
[2024-05-16 16:47:56] -rw-r--r-- 1 boinc boinc     21308 May 16 16:47 stderr.txt
[2024-05-16 16:47:56] HITS file was successfully produced:
[2024-05-16 16:47:56] -rw------- 1 boinc boinc 273006409 May 16 16:47 shared/HITS.pool.root.1
[2024-05-16 16:47:56]  *** Contents of shared directory: ***
[2024-05-16 16:47:56] total 869004
[2024-05-16 16:47:56] -rw-r--r-- 2 boinc boinc 613502439 May 16 10:45 ATLAS.root_0
[2024-05-16 16:47:56] -rw-r--r-- 2 boinc boinc     17537 May 16 10:45 start_atlas.sh
[2024-05-16 16:47:56] -rw-r--r-- 2 boinc boinc    479994 May 16 10:45 input.tar.gz
[2024-05-16 16:47:56] -rw------- 1 boinc boinc 273006409 May 16 16:47 HITS.pool.root.1
[2024-05-16 16:47:56] -rw------- 1 boinc boinc   2836480 May 16 16:47 result.tar.gz
16:47:58 (2153218): run_atlas exited; CPU time 83142.899780
16:47:58 (2153218): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN