Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:18:11 (1339466): wrapper (7.7.26015): starting
09:18:11 (1339466): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 09:18:11] Arguments: --nthreads 4
[2024-05-15 09:18:11] Threads: 4
[2024-05-15 09:18:11] Checking for CVMFS
[2024-05-15 09:18:11] No cvmfs_config command found, will try listing directly
[2024-05-15 09:18:11] CVMFS is ok
[2024-05-15 09:18:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 09:18:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 09:18:11] Further information can be found at the LHC@home message board.
[2024-05-15 09:18:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 09:18:11] Checking for apptainer binary...
[2024-05-15 09:18:11] which: no apptainer in ((null))
[2024-05-15 09:18:11] apptainer is not installed, using version from CVMFS
[2024-05-15 09:18:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 09:18:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-05-15 09:18:12] apptainer works
[2024-05-15 09:18:12] Set ATHENA_PROC_NUMBER=4
[2024-05-15 09:18:12] Set ATHENA_CORE_NUMBER=4
[2024-05-15 09:18:13] Starting ATLAS job with PandaID=6205820223
[2024-05-15 09:18:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 13:33:07]  *** The last 200 lines of the pilot log: ***
[2024-05-15 13:33:07] 2024-05-15 11:32:49,827 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 13:33:07] 2024-05-15 11:32:49,830 | INFO     | fitting pss+swap vs Time
[2024-05-15 13:33:07] 2024-05-15 11:32:49,830 | INFO     | model: linear, x: [1715757532.0, 1715757593.0, 1715757654.0, 1715757715.0, 1715757776.0, 1715757837.0, 1715757898.0, 1715757959.0, 1715758020.0, 1715758081.0, 1715
[2024-05-15 13:33:07] 2024-05-15 11:32:49,831 | INFO     | sum of square deviations: 4844974562.5
[2024-05-15 13:33:07] 2024-05-15 11:32:49,832 | INFO     | sum of deviations: 44767456194.5
[2024-05-15 13:33:07] 2024-05-15 11:32:49,832 | INFO     | mean x: 1715765126.5
[2024-05-15 13:33:07] 2024-05-15 11:32:49,832 | INFO     | mean y: 2344532.524
[2024-05-15 13:33:07] 2024-05-15 11:32:49,832 | INFO     | -- intersect: -15851286719.774137
[2024-05-15 13:33:07] 2024-05-15 11:32:49,832 | INFO     | intersect: -15851286719.774137
[2024-05-15 13:33:07] 2024-05-15 11:32:49,832 | INFO     | chi2: 3.8537437808533404
[2024-05-15 13:33:07] 2024-05-15 11:32:49,832 | INFO     | model: linear, x: [1715757532.0, 1715757593.0, 1715757654.0, 1715757715.0, 1715757776.0, 1715757837.0, 1715757898.0, 1715757959.0, 1715758020.0, 1715758081.0, 1715
[2024-05-15 13:33:07] 2024-05-15 11:32:49,833 | INFO     | sum of square deviations: 4560048290.0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,834 | INFO     | sum of deviations: 44046243647.999985
[2024-05-15 13:33:07] 2024-05-15 11:32:49,834 | INFO     | mean x: 1715764974.0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,834 | INFO     | mean y: 2344146.481632653
[2024-05-15 13:33:07] 2024-05-15 11:32:49,834 | INFO     | -- intersect: -16570507122.053587
[2024-05-15 13:33:07] 2024-05-15 11:32:49,834 | INFO     | intersect: -16570507122.053587
[2024-05-15 13:33:07] 2024-05-15 11:32:49,834 | INFO     | chi2: 3.8572655876545485
[2024-05-15 13:33:07] 2024-05-15 11:32:49,834 | INFO     | current chi2=3.8572655876545485 (change=-0.09138663599551324 %)
[2024-05-15 13:33:07] 2024-05-15 11:32:49,834 | INFO     | right removable region: 244
[2024-05-15 13:33:07] 2024-05-15 11:32:49,835 | INFO     | model: linear, x: [1715757837.0, 1715757898.0, 1715757959.0, 1715758020.0, 1715758081.0, 1715758142.0, 1715758203.0, 1715758264.0, 1715758325.0, 1715758386.0, 1715
[2024-05-15 13:33:07] 2024-05-15 11:32:49,835 | INFO     | sum of square deviations: 4560048290.0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,836 | INFO     | sum of deviations: -10886033892.000008
[2024-05-15 13:33:07] 2024-05-15 11:32:49,836 | INFO     | mean x: 1715765279.0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,836 | INFO     | mean y: 2374232.5428571426
[2024-05-15 13:33:07] 2024-05-15 11:32:49,836 | INFO     | -- intersect: 4098356948.0923123
[2024-05-15 13:33:07] 2024-05-15 11:32:49,836 | INFO     | intersect: 4098356948.0923123
[2024-05-15 13:33:07] 2024-05-15 11:32:49,836 | INFO     | chi2: 1.497009829087482
[2024-05-15 13:33:07] 2024-05-15 11:32:49,836 | INFO     | current chi2=1.497009829087482 (change=61.154401687908866 %)
[2024-05-15 13:33:07] 2024-05-15 11:32:49,837 | INFO     | model: linear, x: [1715758142.0, 1715758203.0, 1715758264.0, 1715758325.0, 1715758386.0, 1715758447.0, 1715758508.0, 1715758569.0, 1715758630.0, 1715758691.0, 1715
[2024-05-15 13:33:07] 2024-05-15 11:32:49,837 | INFO     | sum of square deviations: 4286517580.0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,838 | INFO     | sum of deviations: -52485154966.499985
[2024-05-15 13:33:07] 2024-05-15 11:32:49,838 | INFO     | mean x: 1715765431.5
[2024-05-15 13:33:07] 2024-05-15 11:32:49,838 | INFO     | mean y: 2397425.8041666667
[2024-05-15 13:33:07] 2024-05-15 11:32:49,838 | INFO     | -- intersect: 21010643135.236485
[2024-05-15 13:33:07] 2024-05-15 11:32:49,838 | INFO     | intersect: 21010643135.236485
[2024-05-15 13:33:07] 2024-05-15 11:32:49,838 | INFO     | chi2: 0.26813593958481247
[2024-05-15 13:33:07] 2024-05-15 11:32:49,838 | INFO     | current chi2=0.26813593958481247 (change=82.08856519343914 %)
[2024-05-15 13:33:07] 2024-05-15 11:32:49,838 | INFO     | model: linear, x: [1715758447.0, 1715758508.0, 1715758569.0, 1715758630.0, 1715758691.0, 1715758752.0, 1715758813.0, 1715758874.0, 1715758935.0, 1715758996.0, 1715
[2024-05-15 13:33:07] 2024-05-15 11:32:49,839 | INFO     | sum of square deviations: 4024149870.0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | sum of deviations: -53978634772.0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | mean x: 1715765584.0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | mean y: 2398243.8340425533
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | -- intersect: 23017118571.11233
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | intersect: 23017118571.11233
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | chi2: 0.21498130856389594
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | current chi2=0.21498130856389594 (change=19.823762194363916 %)
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | left removable region: 30
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | model: linear, x: [1715759362.0, 1715759423.0, 1715759484.0, 1715759545.0, 1715759606.0, 1715759667.0, 1715759728.0, 1715759789.0, 1715759850.0, 1715759911.0, 1715
[2024-05-15 13:33:07] 2024-05-15 11:32:49,840 | INFO     | sum of square deviations: 3038856977.5
[2024-05-15 13:33:07] 2024-05-15 11:32:49,841 | INFO     | sum of deviations: -31220923955.499996
[2024-05-15 13:33:07] 2024-05-15 11:32:49,841 | INFO     | mean x: 1715765858.5
[2024-05-15 13:33:07] 2024-05-15 11:32:49,841 | INFO     | mean y: 2384898.042056075
[2024-05-15 13:33:07] 2024-05-15 11:32:49,841 | INFO     | -- intersect: 17629998105.999184
[2024-05-15 13:33:07] 2024-05-15 11:32:49,841 | INFO     | intersect: 17629998105.999184
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | chi2: 0.17214121173606695
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | -- intersect: 17629998105.999184
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | current memory leak: -10.27 B/s (using 214 data points, chi2=0.17)
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | ..............................
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | . Timing measurements:
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | . get job = 0 s
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | . initial setup = 2 s
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | . payload setup = 6 s
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | . stage-in = 0 s
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | . payload execution = 15230 s
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | . stage-out = 0 s
[2024-05-15 13:33:07] 2024-05-15 11:32:49,842 | INFO     | . log creation = 0 s
[2024-05-15 13:33:07] 2024-05-15 11:32:49,843 | INFO     | ..............................
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | 
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | job summary report
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | --------------------------------------------------
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | PanDA job id: 6205820223
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | task id: 38776146
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | errors: (none)
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | pilot state: finished 
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | transexitcode: 0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | exeerrorcode: 0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | exeerrordiag: 
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | exitcode: 0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,904 | INFO     | exitmsg: OK
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | cpuconsumptiontime: 58072 s
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | nevents: 400
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | neventsw: 0
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | pid: 1350895
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | pgrp: 1350895
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | corecount: 4
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | event service: False
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | sizes: {0: 2394498, 5: 2394704, 11: 2394760, 15240: 2425799, 15242: 2434781, 15245: 2434837, 15250: 2435135}
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | --------------------------------------------------
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | 
[2024-05-15 13:33:07] 2024-05-15 11:32:49,905 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/1
[2024-05-15 13:33:07] 2024-05-15 11:32:49,958 | WARNING  | process 1350895 is no longer using CPU - aborting
[2024-05-15 13:33:07] 2024-05-15 11:32:49,958 | INFO     | aborting job monitoring since job object (job id=6205820223) has expired
[2024-05-15 13:33:07] 2024-05-15 11:32:49,973 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,973 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,974 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 13:33:07] 2024-05-15 11:32:49,975 | INFO     | job 6205820223 has completed (purged errors)
[2024-05-15 13:33:07] 2024-05-15 11:32:49,975 | INFO     | overall cleanup function is called
[2024-05-15 13:33:07] 2024-05-15 11:32:50,980 | INFO     | --- collectZombieJob: --- 10, [1350895]
[2024-05-15 13:33:07] 2024-05-15 11:32:50,980 | INFO     | zombie collector waiting for pid 1350895
[2024-05-15 13:33:07] 2024-05-15 11:32:50,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 13:33:07] 2024-05-15 11:32:51,984 | INFO     | collected zombie processes
[2024-05-15 13:33:07] 2024-05-15 11:32:51,984 | INFO     | will now attempt to kill all subprocesses of pid=1350895
[2024-05-15 13:33:07] 2024-05-15 11:32:52,130 | INFO     | process IDs to be killed: [1350895] (in reverse order)
[2024-05-15 13:33:07] 2024-05-15 11:32:52,227 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 13:33:07] 2024-05-15 11:32:52,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 13:33:07] 2024-05-15 11:32:52,234 | INFO     | did not find any defunct processes belonging to 1350895
[2024-05-15 13:33:07] 2024-05-15 11:32:52,240 | INFO     | did not find any defunct processes belonging to 1350895
[2024-05-15 13:33:07] 2024-05-15 11:32:52,241 | INFO     | ready for new job
[2024-05-15 13:33:07] 2024-05-15 11:32:52,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 13:33:07] 2024-05-15 11:32:52,242 | INFO     | *************************************
[2024-05-15 13:33:07] 2024-05-15 11:32:52,243 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 13:33:07] 2024-05-15 11:32:52,243 | INFO     | *************************************
[2024-05-15 13:33:07] 2024-05-15 11:32:52,243 | INFO     | 
[2024-05-15 13:33:07] 2024-05-15 11:32:52,245 | INFO     | architecture information:
[2024-05-15 13:33:07] 2024-05-15 11:32:52,246 | INFO     | executing command: cat /etc/os-release
[2024-05-15 13:33:07] 2024-05-15 11:32:52,259 | INFO     | cat /etc/os-release:
[2024-05-15 13:33:07] NAME="CentOS Linux"
[2024-05-15 13:33:07] VERSION="7 (Core)"
[2024-05-15 13:33:07] ID="centos"
[2024-05-15 13:33:07] ID_LIKE="rhel fedora"
[2024-05-15 13:33:07] VERSION_ID="7"
[2024-05-15 13:33:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 13:33:07] ANSI_COLOR="0;31"
[2024-05-15 13:33:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 13:33:07] HOME_URL="https://www.centos.org/"
[2024-05-15 13:33:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 13:33:07] 
[2024-05-15 13:33:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 13:33:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 13:33:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 13:33:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 13:33:07] 
[2024-05-15 13:33:07] 2024-05-15 11:32:52,259 | INFO     | *************************************
[2024-05-15 13:33:07] 2024-05-15 11:32:52,762 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/1
[2024-05-15 13:33:07] 2024-05-15 11:32:52,781 | INFO     | sufficient remaining disk space (588922224640 B)
[2024-05-15 13:33:07] 2024-05-15 11:32:52,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 13:33:07] 2024-05-15 11:32:52,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 13:33:07] 2024-05-15 11:32:52,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 13:33:07] 2024-05-15 11:32:52,930 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 13:33:07] 2024-05-15 11:32:52,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 13:33:07] 2024-05-15 11:32:52,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 13:33:07] 2024-05-15 11:32:53,404 | INFO     | all data control threads have been joined
[2024-05-15 13:33:07] 2024-05-15 11:32:53,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 13:33:07] 2024-05-15 11:32:53,468 | INFO     | aborting loop
[2024-05-15 13:33:07] 2024-05-15 11:32:53,507 | INFO     | all payload control threads have been joined
[2024-05-15 13:33:07] 2024-05-15 11:32:53,787 | INFO     | [job] retrieve thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:53,813 | INFO     | all job control threads have been joined
[2024-05-15 13:33:07] 2024-05-15 11:32:53,844 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:53,864 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:53,869 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,197 | INFO     | [data] copytool_in thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,269 | INFO     | [payload] validate_post thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,303 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,371 | INFO     | [payload] failed_post thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,408 | INFO     | [data] control thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,474 | INFO     | [job] job monitor thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,512 | INFO     | [payload] control thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,787 | INFO     | [data] copytool_out thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,819 | INFO     | [job] control thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:54,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 13:33:07] 2024-05-15 11:32:55,245 | INFO     | [job] validate thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:55,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 13:33:07] 2024-05-15 11:32:55,918 | INFO     | [job] queue monitor thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:32:59,646 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 13:33:07] 2024-05-15 11:33:01,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46971603096640)>', '<ExcThread(monitor, started 46972182468352)>']
[2024-05-15 13:33:07] 2024-05-15 11:33:01,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 13:33:07] 2024-05-15 11:33:01,973 | INFO     | [monitor] control thread has ended
[2024-05-15 13:33:07] 2024-05-15 11:33:06,583 | INFO     | all workflow threads have been joined
[2024-05-15 13:33:07] 2024-05-15 11:33:06,583 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 13:33:07] 2024-05-15 11:33:06,583 | INFO     | traces error code: 0
[2024-05-15 13:33:07] 2024-05-15 11:33:06,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 13:33:07] 2024-05-15 11:33:06,652 [wrapper] ==== pilot stdout END ====
[2024-05-15 13:33:07] 2024-05-15 11:33:06,656 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 13:33:07] 2024-05-15 11:33:06,657 [wrapper] pilotpid: 1343819
[2024-05-15 13:33:07] 2024-05-15 11:33:06,660 [wrapper] Pilot exit status: 0
[2024-05-15 13:33:07] 2024-05-15 11:33:06,669 [wrapper] pandaids: 6205820223
[2024-05-15 13:33:07] 2024-05-15 11:33:06,732 [wrapper] cleanup: SIGTERM to supervisor_pilot 1921288 1343820
[2024-05-15 13:33:07] 2024-05-15 11:33:06,734 [wrapper] Test setup, not cleaning
[2024-05-15 13:33:07] 2024-05-15 11:33:06,736 [wrapper] ==== wrapper stdout END ====
[2024-05-15 13:33:07] 2024-05-15 11:33:06,738 [wrapper] ==== wrapper stderr END ====
[2024-05-15 13:33:07] 2024-05-15 11:33:06,742 [wrapper] apfmon messages muted
[2024-05-15 13:33:07]  *** Error codes and diagnostics ***
[2024-05-15 13:33:07]     "exeErrorCode": 0,
[2024-05-15 13:33:07]     "exeErrorDiag": "",
[2024-05-15 13:33:07]     "pilotErrorCode": 0,
[2024-05-15 13:33:07]     "pilotErrorDiag": "",
[2024-05-15 13:33:07]  *** Listing of results directory ***
[2024-05-15 13:33:07] total 875052
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc    467845 May 13 11:19 pilot3.tar.gz
[2024-05-15 13:33:07] -rwx------ 1 boinc boinc     32251 May 13 11:23 runpilot2-wrapper.sh
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc      5633 May 13 11:24 queuedata.json
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc       100 May 15 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 13:33:07] -rwxr-xr-x 1 boinc boinc      7986 May 15 09:18 run_atlas
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc       105 May 15 09:18 job.xml
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc      6663 May 15 09:18 init_data.xml
[2024-05-15 13:33:07] -rw-r--r-- 2 boinc boinc 611755181 May 15 09:18 EVNT.38776140._000043.pool.root.1
[2024-05-15 13:33:07] -rw-r--r-- 2 boinc boinc     17537 May 15 09:18 start_atlas.sh
[2024-05-15 13:33:07] drwxrwx--x 2 boinc boinc      4096 May 15 09:18 shared
[2024-05-15 13:33:07] -rw-r--r-- 2 boinc boinc    479995 May 15 09:18 input.tar.gz
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc         0 May 15 09:18 boinc_lockfile
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc      2621 May 15 09:18 pandaJob.out
[2024-05-15 13:33:07] -rw------- 1 boinc boinc       424 May 15 09:18 setup.sh.local
[2024-05-15 13:33:07] -rw------- 1 boinc boinc   1007418 May 15 09:18 agis_schedconf.cvmfs.json
[2024-05-15 13:33:07] -rw------- 1 boinc boinc   1324588 May 15 09:18 cric_ddmendpoints.json
[2024-05-15 13:33:07] drwx------ 4 boinc boinc      4096 May 15 09:18 pilot3
[2024-05-15 13:33:07] -rw------- 1 boinc boinc        95 May 15 13:32 pilot_heartbeat.json
[2024-05-15 13:33:07] -rw------- 1 boinc boinc 276773355 May 15 13:32 HITS.38776146._001076.pool.root.1
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc       532 May 15 13:32 boinc_task_state.xml
[2024-05-15 13:33:07] -rw------- 1 boinc boinc      1051 May 15 13:32 memory_monitor_summary.json
[2024-05-15 13:33:07] -rw------- 1 boinc boinc         0 May 15 13:32 agis_ddmendpoints.agis.ALL.json
[2024-05-15 13:33:07] -rw------- 1 boinc boinc    365882 May 15 13:32 log.38776146._001076.job.log.tgz.1
[2024-05-15 13:33:07] -rw------- 1 boinc boinc      7768 May 15 13:32 heartbeat.json
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc      8192 May 15 13:33 boinc_mmap_file
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc        28 May 15 13:33 wrapper_checkpoint.txt
[2024-05-15 13:33:07] -rw------- 1 boinc boinc      4221 May 15 13:33 pilotlog.txt
[2024-05-15 13:33:07] -rw------- 1 boinc boinc   1634586 May 15 13:33 log.38776146._001076.job.log.1
[2024-05-15 13:33:07] -rw------- 1 boinc boinc       357 May 15 13:33 output.list
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc       620 May 15 13:33 runtime_log
[2024-05-15 13:33:07] -rw------- 1 boinc boinc   2017280 May 15 13:33 result.tar.gz
[2024-05-15 13:33:07] -rw------- 1 boinc boinc       658 May 15 13:33 sWcNDmY5gQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDm7AXKDmP6xUfn.diag
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc     11410 May 15 13:33 runtime_log.err
[2024-05-15 13:33:07] -rw-r--r-- 1 boinc boinc     21338 May 15 13:33 stderr.txt
[2024-05-15 13:33:07] HITS file was successfully produced:
[2024-05-15 13:33:07] -rw------- 1 boinc boinc 276773355 May 15 13:32 shared/HITS.pool.root.1
[2024-05-15 13:33:07]  *** Contents of shared directory: ***
[2024-05-15 13:33:07] total 870180
[2024-05-15 13:33:07] -rw-r--r-- 2 boinc boinc 611755181 May 15 09:18 ATLAS.root_0
[2024-05-15 13:33:07] -rw-r--r-- 2 boinc boinc     17537 May 15 09:18 start_atlas.sh
[2024-05-15 13:33:07] -rw-r--r-- 2 boinc boinc    479995 May 15 09:18 input.tar.gz
[2024-05-15 13:33:07] -rw------- 1 boinc boinc 276773355 May 15 13:32 HITS.pool.root.1
[2024-05-15 13:33:07] -rw------- 1 boinc boinc   2017280 May 15 13:33 result.tar.gz
13:33:09 (1339466): run_atlas exited; CPU time 57753.439092
13:33:09 (1339466): called boinc_finish(0)

</stderr_txt>
]]>

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