Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:56:55 (1682762): wrapper (7.7.26015): starting
09:56:55 (1682762): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 09:56:55] Arguments: --nthreads 4
[2024-05-17 09:56:55] Threads: 4
[2024-05-17 09:56:55] Checking for CVMFS
[2024-05-17 09:56:55] No cvmfs_config command found, will try listing directly
[2024-05-17 09:56:55] CVMFS is ok
[2024-05-17 09:56:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 09:56:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 09:56:55] Further information can be found at the LHC@home message board.
[2024-05-17 09:56:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 09:56:55] Checking for apptainer binary...
[2024-05-17 09:56:55] which: no apptainer in ((null))
[2024-05-17 09:56:55] apptainer is not installed, using version from CVMFS
[2024-05-17 09:56:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 09:56:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-17 09:56:56] apptainer works
[2024-05-17 09:56:56] Set ATHENA_PROC_NUMBER=4
[2024-05-17 09:56:56] Set ATHENA_CORE_NUMBER=4
[2024-05-17 09:56:56] Starting ATLAS job with PandaID=6205810894
[2024-05-17 09:56:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 12:54:39]  *** The last 200 lines of the pilot log: ***
[2024-05-17 12:54:40] 2024-05-17 10:54:25,932 | INFO     | -- intersect: -65816114834.79349
[2024-05-17 12:54:40] 2024-05-17 10:54:25,932 | INFO     | intersect: -65816114834.79349
[2024-05-17 12:54:40] 2024-05-17 10:54:25,933 | INFO     | chi2: 4.115983667146579
[2024-05-17 12:54:40] 2024-05-17 10:54:25,933 | INFO     | model: linear, x: [1715932647.0, 1715932708.0, 1715932769.0, 1715932830.0, 1715932891.0, 1715932952.0, 1715933013.0, 1715933074.0, 1715933135.0, 1715933196.0, 1715
[2024-05-17 12:54:40] 2024-05-17 10:54:25,933 | INFO     | sum of square deviations: 1496660620.0
[2024-05-17 12:54:40] 2024-05-17 10:54:25,934 | INFO     | sum of deviations: 61043227223.00001
[2024-05-17 12:54:40] 2024-05-17 10:54:25,935 | INFO     | mean x: 1715937771.0
[2024-05-17 12:54:40] 2024-05-17 10:54:25,935 | INFO     | mean y: 2297612.727810651
[2024-05-17 12:54:40] 2024-05-17 10:54:25,935 | INFO     | -- intersect: -69984430076.86768
[2024-05-17 12:54:40] 2024-05-17 10:54:25,935 | INFO     | intersect: -69984430076.86768
[2024-05-17 12:54:40] 2024-05-17 10:54:25,935 | INFO     | chi2: 4.1171817458023074
[2024-05-17 12:54:40] 2024-05-17 10:54:25,935 | INFO     | current chi2=4.1171817458023074 (change=-0.029107954564824644 %)
[2024-05-17 12:54:40] 2024-05-17 10:54:25,935 | INFO     | right removable region: 168
[2024-05-17 12:54:40] 2024-05-17 10:54:25,936 | INFO     | model: linear, x: [1715932952.0, 1715933013.0, 1715933074.0, 1715933135.0, 1715933196.0, 1715933257.0, 1715933318.0, 1715933379.0, 1715933440.0, 1715933501.0, 1715
[2024-05-17 12:54:40] 2024-05-17 10:54:25,936 | INFO     | sum of square deviations: 1496660620.0
[2024-05-17 12:54:40] 2024-05-17 10:54:25,937 | INFO     | sum of deviations: 22605531036.000004
[2024-05-17 12:54:40] 2024-05-17 10:54:25,937 | INFO     | mean x: 1715938076.0
[2024-05-17 12:54:40] 2024-05-17 10:54:25,937 | INFO     | mean y: 2343903.769230769
[2024-05-17 12:54:40] 2024-05-17 10:54:25,938 | INFO     | -- intersect: -25915149290.427418
[2024-05-17 12:54:40] 2024-05-17 10:54:25,938 | INFO     | intersect: -25915149290.427418
[2024-05-17 12:54:40] 2024-05-17 10:54:25,938 | INFO     | chi2: 1.588794212979553
[2024-05-17 12:54:40] 2024-05-17 10:54:25,938 | INFO     | current chi2=1.588794212979553 (change=61.399404335319176 %)
[2024-05-17 12:54:40] 2024-05-17 10:54:25,938 | INFO     | model: linear, x: [1715933257.0, 1715933318.0, 1715933379.0, 1715933440.0, 1715933501.0, 1715933562.0, 1715933623.0, 1715933684.0, 1715933745.0, 1715933806.0, 1715
[2024-05-17 12:54:40] 2024-05-17 10:54:25,939 | INFO     | sum of square deviations: 1367709365.0
[2024-05-17 12:54:40] 2024-05-17 10:54:25,939 | INFO     | sum of deviations: -9386031783.5
[2024-05-17 12:54:40] 2024-05-17 10:54:25,940 | INFO     | mean x: 1715938228.5
[2024-05-17 12:54:40] 2024-05-17 10:54:25,940 | INFO     | mean y: 2381744.262195122
[2024-05-17 12:54:40] 2024-05-17 10:54:25,940 | INFO     | -- intersect: 11778166251.83094
[2024-05-17 12:54:40] 2024-05-17 10:54:25,940 | INFO     | intersect: 11778166251.83094
[2024-05-17 12:54:40] 2024-05-17 10:54:25,940 | INFO     | chi2: 0.09554625452481806
[2024-05-17 12:54:40] 2024-05-17 10:54:25,940 | INFO     | current chi2=0.09554625452481806 (change=93.98624102830568 %)
[2024-05-17 12:54:40] 2024-05-17 10:54:25,940 | INFO     | model: linear, x: [1715933562.0, 1715933623.0, 1715933684.0, 1715933745.0, 1715933806.0, 1715933867.0, 1715933928.0, 1715933989.0, 1715934050.0, 1715934111.0, 1715
[2024-05-17 12:54:40] 2024-05-17 10:54:25,941 | INFO     | sum of square deviations: 1246386160.0
[2024-05-17 12:54:40] 2024-05-17 10:54:25,941 | INFO     | sum of deviations: -14102333006.999998
[2024-05-17 12:54:40] 2024-05-17 10:54:25,942 | INFO     | mean x: 1715938381.0
[2024-05-17 12:54:40] 2024-05-17 10:54:25,942 | INFO     | mean y: 2387588.849056604
[2024-05-17 12:54:40] 2024-05-17 10:54:25,942 | INFO     | -- intersect: 19417505667.78732
[2024-05-17 12:54:40] 2024-05-17 10:54:25,942 | INFO     | intersect: 19417505667.78732
[2024-05-17 12:54:40] 2024-05-17 10:54:25,942 | INFO     | chi2: 0.02312669216333571
[2024-05-17 12:54:40] 2024-05-17 10:54:25,942 | INFO     | current chi2=0.02312669216333571 (change=75.79529173764884 %)
[2024-05-17 12:54:40] 2024-05-17 10:54:25,942 | INFO     | model: linear, x: [1715933867.0, 1715933928.0, 1715933989.0, 1715934050.0, 1715934111.0, 1715934172.0, 1715934233.0, 1715934294.0, 1715934355.0, 1715934416.0, 1715
[2024-05-17 12:54:40] 2024-05-17 10:54:25,943 | INFO     | sum of square deviations: 1132458442.5
[2024-05-17 12:54:40] 2024-05-17 10:54:25,944 | INFO     | sum of deviations: -14158998316.499998
[2024-05-17 12:54:40] 2024-05-17 10:54:25,944 | INFO     | mean x: 1715938533.5
[2024-05-17 12:54:40] 2024-05-17 10:54:25,944 | INFO     | mean y: 2387658.9935064935
[2024-05-17 12:54:40] 2024-05-17 10:54:25,944 | INFO     | -- intersect: 21456570784.167194
[2024-05-17 12:54:40] 2024-05-17 10:54:25,944 | INFO     | intersect: 21456570784.167194
[2024-05-17 12:54:40] 2024-05-17 10:54:25,944 | INFO     | chi2: 0.02010917186266858
[2024-05-17 12:54:40] 2024-05-17 10:54:25,944 | INFO     | current chi2=0.02010917186266858 (change=13.047781668711817 %)
[2024-05-17 12:54:40] 2024-05-17 10:54:25,944 | INFO     | left removable region: 40
[2024-05-17 12:54:40] 2024-05-17 10:54:25,945 | INFO     | model: linear, x: [1715935087.0, 1715935148.0, 1715935209.0, 1715935270.0, 1715935331.0, 1715935392.0, 1715935453.0, 1715935514.0, 1715935575.0, 1715935636.0, 1715
[2024-05-17 12:54:40] 2024-05-17 10:54:25,945 | INFO     | sum of square deviations: 650252192.0
[2024-05-17 12:54:40] 2024-05-17 10:54:25,945 | INFO     | sum of deviations: -7893870005.0
[2024-05-17 12:54:40] 2024-05-17 10:54:25,946 | INFO     | mean x: 1715938960.5
[2024-05-17 12:54:40] 2024-05-17 10:54:25,946 | INFO     | mean y: 2379078.109375
[2024-05-17 12:54:40] 2024-05-17 10:54:25,946 | INFO     | -- intersect: 20833372433.225708
[2024-05-17 12:54:40] 2024-05-17 10:54:25,946 | INFO     | intersect: 20833372433.225708
[2024-05-17 12:54:40] 2024-05-17 10:54:25,946 | INFO     | chi2: 0.016493051535091362
[2024-05-17 12:54:40] 2024-05-17 10:54:25,946 | INFO     | -- intersect: 20833372433.225708
[2024-05-17 12:54:40] 2024-05-17 10:54:25,946 | INFO     | current memory leak: -12.14 B/s (using 128 data points, chi2=0.02)
[2024-05-17 12:54:40] 2024-05-17 10:54:25,947 | INFO     | ..............................
[2024-05-17 12:54:40] 2024-05-17 10:54:25,947 | INFO     | . Timing measurements:
[2024-05-17 12:54:40] 2024-05-17 10:54:25,947 | INFO     | . get job = 0 s
[2024-05-17 12:54:40] 2024-05-17 10:54:25,947 | INFO     | . initial setup = 1 s
[2024-05-17 12:54:40] 2024-05-17 10:54:25,947 | INFO     | . payload setup = 4 s
[2024-05-17 12:54:40] 2024-05-17 10:54:25,947 | INFO     | . stage-in = 0 s
[2024-05-17 12:54:40] 2024-05-17 10:54:25,947 | INFO     | . payload execution = 10608 s
[2024-05-17 12:54:40] 2024-05-17 10:54:25,948 | INFO     | . stage-out = 0 s
[2024-05-17 12:54:40] 2024-05-17 10:54:25,948 | INFO     | . log creation = 0 s
[2024-05-17 12:54:40] 2024-05-17 10:54:25,948 | INFO     | ..............................
[2024-05-17 12:54:40] 2024-05-17 10:54:26,059 | INFO     | 
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | job summary report
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | --------------------------------------------------
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | PanDA job id: 6205810894
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | task id: 38776125
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | errors: (none)
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | pilot state: finished 
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | transexitcode: 0
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | exeerrorcode: 0
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | exeerrordiag: 
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | exitcode: 0
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | exitmsg: OK
[2024-05-17 12:54:40] 2024-05-17 10:54:26,060 | INFO     | cpuconsumptiontime: 39702 s
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | nevents: 400
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | neventsw: 0
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | pid: 1694169
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | pgrp: 1694169
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | corecount: 4
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | event service: False
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | sizes: {0: 2392162, 3: 2392368, 11: 2392396, 10616: 2421392, 10617: 2430374, 10620: 2430430, 10627: 2430728}
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | --------------------------------------------------
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | 
[2024-05-17 12:54:40] 2024-05-17 10:54:26,061 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-05-17 12:54:40] 2024-05-17 10:54:26,089 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,089 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,089 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,089 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,089 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,089 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,090 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 12:54:40] 2024-05-17 10:54:26,091 | INFO     | job 6205810894 has completed (purged errors)
[2024-05-17 12:54:40] 2024-05-17 10:54:26,091 | INFO     | overall cleanup function is called
[2024-05-17 12:54:40] 2024-05-17 10:54:27,098 | INFO     | --- collectZombieJob: --- 10, [1694169]
[2024-05-17 12:54:40] 2024-05-17 10:54:27,098 | INFO     | zombie collector waiting for pid 1694169
[2024-05-17 12:54:40] 2024-05-17 10:54:27,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 12:54:40] 2024-05-17 10:54:28,103 | INFO     | collected zombie processes
[2024-05-17 12:54:40] 2024-05-17 10:54:28,103 | INFO     | will now attempt to kill all subprocesses of pid=1694169
[2024-05-17 12:54:40] 2024-05-17 10:54:28,254 | INFO     | process IDs to be killed: [1694169] (in reverse order)
[2024-05-17 12:54:40] 2024-05-17 10:54:28,358 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 12:54:40] 2024-05-17 10:54:28,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 12:54:40] 2024-05-17 10:54:28,368 | INFO     | did not find any defunct processes belonging to 1694169
[2024-05-17 12:54:40] 2024-05-17 10:54:28,375 | INFO     | did not find any defunct processes belonging to 1694169
[2024-05-17 12:54:40] 2024-05-17 10:54:28,375 | INFO     | ready for new job
[2024-05-17 12:54:40] 2024-05-17 10:54:28,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 12:54:40] 2024-05-17 10:54:28,377 | INFO     | *************************************
[2024-05-17 12:54:40] 2024-05-17 10:54:28,377 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 12:54:40] 2024-05-17 10:54:28,377 | INFO     | *************************************
[2024-05-17 12:54:40] 2024-05-17 10:54:28,377 | INFO     | 
[2024-05-17 12:54:40] 2024-05-17 10:54:28,379 | INFO     | architecture information:
[2024-05-17 12:54:40] 2024-05-17 10:54:28,380 | INFO     | executing command: cat /etc/os-release
[2024-05-17 12:54:40] 2024-05-17 10:54:28,395 | INFO     | cat /etc/os-release:
[2024-05-17 12:54:40] NAME="CentOS Linux"
[2024-05-17 12:54:40] VERSION="7 (Core)"
[2024-05-17 12:54:40] ID="centos"
[2024-05-17 12:54:40] ID_LIKE="rhel fedora"
[2024-05-17 12:54:40] VERSION_ID="7"
[2024-05-17 12:54:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 12:54:40] ANSI_COLOR="0;31"
[2024-05-17 12:54:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 12:54:40] HOME_URL="https://www.centos.org/"
[2024-05-17 12:54:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 12:54:40] 
[2024-05-17 12:54:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 12:54:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 12:54:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 12:54:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 12:54:40] 
[2024-05-17 12:54:40] 2024-05-17 10:54:28,396 | INFO     | *************************************
[2024-05-17 12:54:40] 2024-05-17 10:54:28,899 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-05-17 12:54:40] 2024-05-17 10:54:28,920 | INFO     | sufficient remaining disk space (581800296448 B)
[2024-05-17 12:54:40] 2024-05-17 10:54:28,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 12:54:40] 2024-05-17 10:54:28,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 12:54:40] 2024-05-17 10:54:28,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 12:54:40] 2024-05-17 10:54:28,995 | INFO     | aborting loop
[2024-05-17 12:54:40] 2024-05-17 10:54:29,247 | INFO     | all data control threads have been joined
[2024-05-17 12:54:40] 2024-05-17 10:54:29,349 | INFO     | all job control threads have been joined
[2024-05-17 12:54:40] 2024-05-17 10:54:29,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 12:54:40] 2024-05-17 10:54:29,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 12:54:40] 2024-05-17 10:54:29,776 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 12:54:40] 2024-05-17 10:54:29,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 12:54:40] 2024-05-17 10:54:29,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 12:54:40] 2024-05-17 10:54:29,926 | INFO     | [job] retrieve thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:30,001 | INFO     | [job] job monitor thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:30,023 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:30,133 | INFO     | all payload control threads have been joined
[2024-05-17 12:54:40] 2024-05-17 10:54:30,178 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:30,253 | INFO     | [data] control thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:30,354 | INFO     | [job] control thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:30,434 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:30,474 | INFO     | [payload] failed_post thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:30,512 | INFO     | [data] copytool_in thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:30,969 | INFO     | [payload] validate_post thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:31,022 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:31,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 12:54:40] 2024-05-17 10:54:31,138 | INFO     | [payload] control thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:31,294 | INFO     | [job] validate thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:31,393 | INFO     | [data] copytool_out thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:32,071 | INFO     | [job] queue monitor thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:33,674 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 12:54:40] 2024-05-17 10:54:33,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47954243327040)>', '<ExcThread(monitor, started 47954414577408)>']
[2024-05-17 12:54:40] 2024-05-17 10:54:34,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 12:54:40] 2024-05-17 10:54:34,797 | INFO     | [monitor] control thread has ended
[2024-05-17 12:54:40] 2024-05-17 10:54:38,988 | INFO     | all workflow threads have been joined
[2024-05-17 12:54:40] 2024-05-17 10:54:38,988 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 12:54:40] 2024-05-17 10:54:38,989 | INFO     | traces error code: 0
[2024-05-17 12:54:40] 2024-05-17 10:54:38,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 12:54:40] 2024-05-17 10:54:39,066 [wrapper] ==== pilot stdout END ====
[2024-05-17 12:54:40] 2024-05-17 10:54:39,068 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 12:54:40] 2024-05-17 10:54:39,070 [wrapper] pilotpid: 1687106
[2024-05-17 12:54:40] 2024-05-17 10:54:39,072 [wrapper] Pilot exit status: 0
[2024-05-17 12:54:40] 2024-05-17 10:54:39,081 [wrapper] pandaids: 6205810894
[2024-05-17 12:54:40] 2024-05-17 10:54:39,145 [wrapper] cleanup: SIGTERM to supervisor_pilot 2090463 1687107
[2024-05-17 12:54:40] 2024-05-17 10:54:39,147 [wrapper] Test setup, not cleaning
[2024-05-17 12:54:40] 2024-05-17 10:54:39,149 [wrapper] ==== wrapper stdout END ====
[2024-05-17 12:54:40] 2024-05-17 10:54:39,151 [wrapper] ==== wrapper stderr END ====
[2024-05-17 12:54:40] 2024-05-17 10:54:39,155 [wrapper] apfmon messages muted
[2024-05-17 12:54:40]  *** Error codes and diagnostics ***
[2024-05-17 12:54:40]     "exeErrorCode": 0,
[2024-05-17 12:54:40]     "exeErrorDiag": "",
[2024-05-17 12:54:40]     "pilotErrorCode": 0,
[2024-05-17 12:54:40]     "pilotErrorDiag": "",
[2024-05-17 12:54:40]  *** Listing of results directory ***
[2024-05-17 12:54:40] total 843252
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc    467845 May 13 11:03 pilot3.tar.gz
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc      5633 May 13 11:18 queuedata.json
[2024-05-17 12:54:40] -rwx------ 1 boinc boinc     32251 May 13 11:18 runpilot2-wrapper.sh
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc       100 May 17 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 12:54:40] -rwxr-xr-x 1 boinc boinc      7986 May 17 09:55 run_atlas
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc       105 May 17 09:55 job.xml
[2024-05-17 12:54:40] -rw-r--r-- 2 boinc boinc 602975198 May 17 09:56 EVNT.38776119._000136.pool.root.1
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc      6663 May 17 09:56 init_data.xml
[2024-05-17 12:54:40] -rw-r--r-- 2 boinc boinc     17537 May 17 09:56 start_atlas.sh
[2024-05-17 12:54:40] drwxrwx--x 2 boinc boinc      4096 May 17 09:56 shared
[2024-05-17 12:54:40] -rw-r--r-- 2 boinc boinc    480010 May 17 09:56 input.tar.gz
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc         0 May 17 09:56 boinc_lockfile
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc      2640 May 17 09:56 pandaJob.out
[2024-05-17 12:54:40] -rw------- 1 boinc boinc       424 May 17 09:56 setup.sh.local
[2024-05-17 12:54:40] -rw------- 1 boinc boinc   1019364 May 17 09:57 agis_schedconf.cvmfs.json
[2024-05-17 12:54:40] -rw------- 1 boinc boinc         0 May 17 09:57 agis_ddmendpoints.agis.ALL.json
[2024-05-17 12:54:40] -rw------- 1 boinc boinc   1324701 May 17 09:57 cric_ddmendpoints.json
[2024-05-17 12:54:40] drwx------ 4 boinc boinc      4096 May 17 09:57 pilot3
[2024-05-17 12:54:40] -rw------- 1 boinc boinc        95 May 17 12:53 pilot_heartbeat.json
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc       531 May 17 12:53 boinc_task_state.xml
[2024-05-17 12:54:40] -rw------- 1 boinc boinc 254131693 May 17 12:53 HITS.38776125._002958.pool.root.1
[2024-05-17 12:54:40] -rw------- 1 boinc boinc      1049 May 17 12:54 memory_monitor_summary.json
[2024-05-17 12:54:40] -rw------- 1 boinc boinc    311575 May 17 12:54 log.38776125._002958.job.log.tgz.1
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc      8192 May 17 12:54 boinc_mmap_file
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc        28 May 17 12:54 wrapper_checkpoint.txt
[2024-05-17 12:54:40] -rw------- 1 boinc boinc      7769 May 17 12:54 heartbeat.json
[2024-05-17 12:54:40] -rw------- 1 boinc boinc      4221 May 17 12:54 pilotlog.txt
[2024-05-17 12:54:40] -rw------- 1 boinc boinc   1110658 May 17 12:54 log.38776125._002958.job.log.1
[2024-05-17 12:54:40] -rw------- 1 boinc boinc       357 May 17 12:54 output.list
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc       620 May 17 12:54 runtime_log
[2024-05-17 12:54:40] -rw------- 1 boinc boinc   1443840 May 17 12:54 result.tar.gz
[2024-05-17 12:54:40] -rw------- 1 boinc boinc       657 May 17 12:54 yxwNDmT0gQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmnAKKDmAEPEsn.diag
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc     11410 May 17 12:54 runtime_log.err
[2024-05-17 12:54:40] -rw-r--r-- 1 boinc boinc     21293 May 17 12:54 stderr.txt
[2024-05-17 12:54:40] HITS file was successfully produced:
[2024-05-17 12:54:40] -rw------- 1 boinc boinc 254131693 May 17 12:53 shared/HITS.pool.root.1
[2024-05-17 12:54:40]  *** Contents of shared directory: ***
[2024-05-17 12:54:40] total 838932
[2024-05-17 12:54:40] -rw-r--r-- 2 boinc boinc 602975198 May 17 09:56 ATLAS.root_0
[2024-05-17 12:54:40] -rw-r--r-- 2 boinc boinc     17537 May 17 09:56 start_atlas.sh
[2024-05-17 12:54:40] -rw-r--r-- 2 boinc boinc    480010 May 17 09:56 input.tar.gz
[2024-05-17 12:54:40] -rw------- 1 boinc boinc 254131693 May 17 12:53 HITS.pool.root.1
[2024-05-17 12:54:40] -rw------- 1 boinc boinc   1443840 May 17 12:54 result.tar.gz
12:54:41 (1682762): run_atlas exited; CPU time 39466.250820
12:54:41 (1682762): called boinc_finish(0)

</stderr_txt>
]]>

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