Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:11:16 (2021280): wrapper (7.7.26015): starting
01:11:16 (2021280): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 01:11:16] Arguments: --nthreads 4
[2024-05-15 01:11:16] Threads: 4
[2024-05-15 01:11:16] Checking for CVMFS
[2024-05-15 01:11:16] No cvmfs_config command found, will try listing directly
[2024-05-15 01:11:16] CVMFS is ok
[2024-05-15 01:11:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 01:11:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 01:11:16] Further information can be found at the LHC@home message board.
[2024-05-15 01:11:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 01:11:16] Checking for apptainer binary...
[2024-05-15 01:11:16] which: no apptainer in ((null))
[2024-05-15 01:11:16] apptainer is not installed, using version from CVMFS
[2024-05-15 01:11:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 01:11:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-15 01:11:18] apptainer works
[2024-05-15 01:11:18] Set ATHENA_PROC_NUMBER=4
[2024-05-15 01:11:18] Set ATHENA_CORE_NUMBER=4
[2024-05-15 01:11:18] Starting ATLAS job with PandaID=6205812371
[2024-05-15 01:11:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:14:59 (2672601): wrapper (7.7.26015): starting
05:14:59 (2672601): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 05:14:59] Arguments: --nthreads 4
[2024-05-15 05:14:59] Threads: 4
[2024-05-15 05:14:59] This job has been restarted, cleaning up previous attempt
[2024-05-15 05:14:59] Checking for CVMFS
[2024-05-15 05:14:59] No cvmfs_config command found, will try listing directly
[2024-05-15 05:14:59] CVMFS is ok
[2024-05-15 05:14:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 05:14:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 05:14:59] Further information can be found at the LHC@home message board.
[2024-05-15 05:14:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 05:14:59] Checking for apptainer binary...
[2024-05-15 05:14:59] which: no apptainer in ((null))
[2024-05-15 05:14:59] apptainer is not installed, using version from CVMFS
[2024-05-15 05:14:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 05:15:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-15 05:15:00] apptainer works
[2024-05-15 05:15:00] Set ATHENA_PROC_NUMBER=4
[2024-05-15 05:15:00] Set ATHENA_CORE_NUMBER=4
[2024-05-15 05:15:00] Starting ATLAS job with PandaID=6205812371
[2024-05-15 05:15:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 09:15:32]  *** The last 200 lines of the pilot log: ***
[2024-05-15 09:15:32] 2024-05-15 07:15:17,588 | INFO     | -- intersect: -43041692191.70407
[2024-05-15 09:15:32] 2024-05-15 07:15:17,589 | INFO     | intersect: -43041692191.70407
[2024-05-15 09:15:32] 2024-05-15 07:15:17,589 | INFO     | chi2: 4.155151487219136
[2024-05-15 09:15:32] 2024-05-15 07:15:17,589 | INFO     | model: linear, x: [1715742930.0, 1715742991.0, 1715743052.0, 1715743113.0, 1715743174.0, 1715743235.0, 1715743296.0, 1715743357.0, 1715743418.0, 1715743479.0, 1715
[2024-05-15 09:15:32] 2024-05-15 07:15:17,589 | INFO     | sum of square deviations: 3822136780.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,590 | INFO     | sum of deviations: 99932299315.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,590 | INFO     | mean x: 1715749945.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,590 | INFO     | mean y: 2286309.7792207794
[2024-05-15 09:15:32] 2024-05-15 07:15:17,590 | INFO     | -- intersect: -44857133151.76992
[2024-05-15 09:15:32] 2024-05-15 07:15:17,590 | INFO     | intersect: -44857133151.76992
[2024-05-15 09:15:32] 2024-05-15 07:15:17,590 | INFO     | chi2: 4.156224725943882
[2024-05-15 09:15:32] 2024-05-15 07:15:17,591 | INFO     | current chi2=4.156224725943882 (change=-0.025829111839768354 %)
[2024-05-15 09:15:32] 2024-05-15 07:15:17,591 | INFO     | right removable region: 230
[2024-05-15 09:15:32] 2024-05-15 07:15:17,591 | INFO     | model: linear, x: [1715743235.0, 1715743296.0, 1715743357.0, 1715743418.0, 1715743479.0, 1715743540.0, 1715743601.0, 1715743662.0, 1715743723.0, 1715743784.0, 1715
[2024-05-15 09:15:32] 2024-05-15 07:15:17,591 | INFO     | sum of square deviations: 3822136780.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,592 | INFO     | sum of deviations: 47683687800.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,592 | INFO     | mean x: 1715750250.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,592 | INFO     | mean y: 2320439.935064935
[2024-05-15 09:15:32] 2024-05-15 07:15:17,592 | INFO     | -- intersect: -21402800300.870018
[2024-05-15 09:15:32] 2024-05-15 07:15:17,592 | INFO     | intersect: -21402800300.870018
[2024-05-15 09:15:32] 2024-05-15 07:15:17,592 | INFO     | chi2: 1.6601738840164193
[2024-05-15 09:15:32] 2024-05-15 07:15:17,592 | INFO     | current chi2=1.6601738840164193 (change=60.04540654840235 %)
[2024-05-15 09:15:32] 2024-05-15 07:15:17,593 | INFO     | model: linear, x: [1715743540.0, 1715743601.0, 1715743662.0, 1715743723.0, 1715743784.0, 1715743845.0, 1715743906.0, 1715743967.0, 1715744028.0, 1715744089.0, 1715
[2024-05-15 09:15:32] 2024-05-15 07:15:17,593 | INFO     | sum of square deviations: 3579276412.5
[2024-05-15 09:15:32] 2024-05-15 07:15:17,594 | INFO     | sum of deviations: 2233236657.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,594 | INFO     | mean x: 1715750402.5
[2024-05-15 09:15:32] 2024-05-15 07:15:17,594 | INFO     | mean y: 2348982.150442478
[2024-05-15 09:15:32] 2024-05-15 07:15:17,594 | INFO     | -- intersect: -1068168142.4125112
[2024-05-15 09:15:32] 2024-05-15 07:15:17,594 | INFO     | intersect: -1068168142.4125112
[2024-05-15 09:15:32] 2024-05-15 07:15:17,594 | INFO     | chi2: 0.07403187978301659
[2024-05-15 09:15:32] 2024-05-15 07:15:17,594 | INFO     | current chi2=0.07403187978301659 (change=95.5407153132711 %)
[2024-05-15 09:15:32] 2024-05-15 07:15:17,594 | INFO     | model: linear, x: [1715743845.0, 1715743906.0, 1715743967.0, 1715744028.0, 1715744089.0, 1715744150.0, 1715744211.0, 1715744272.0, 1715744333.0, 1715744394.0, 1715
[2024-05-15 09:15:32] 2024-05-15 07:15:17,595 | INFO     | sum of square deviations: 3346927870.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,595 | INFO     | sum of deviations: -4499151990.000001
[2024-05-15 09:15:32] 2024-05-15 07:15:17,595 | INFO     | mean x: 1715750555.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,596 | INFO     | mean y: 2353354.221719457
[2024-05-15 09:15:32] 2024-05-15 07:15:17,596 | INFO     | -- intersect: 2308773696.609276
[2024-05-15 09:15:32] 2024-05-15 07:15:17,596 | INFO     | intersect: 2308773696.609276
[2024-05-15 09:15:32] 2024-05-15 07:15:17,596 | INFO     | chi2: 0.006064586103141855
[2024-05-15 09:15:32] 2024-05-15 07:15:17,596 | INFO     | current chi2=0.006064586103141855 (change=91.80814249088795 %)
[2024-05-15 09:15:32] 2024-05-15 07:15:17,596 | INFO     | model: linear, x: [1715744150.0, 1715744211.0, 1715744272.0, 1715744333.0, 1715744394.0, 1715744455.0, 1715744516.0, 1715744577.0, 1715744638.0, 1715744699.0, 1715
[2024-05-15 09:15:32] 2024-05-15 07:15:17,596 | INFO     | sum of square deviations: 3124858590.0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,597 | INFO     | sum of deviations: -4971220741.999998
[2024-05-15 09:15:32] 2024-05-15 07:15:17,597 | INFO     | mean x: 1715750707.5
[2024-05-15 09:15:32] 2024-05-15 07:15:17,597 | INFO     | mean y: 2353676.4166666665
[2024-05-15 09:15:32] 2024-05-15 07:15:17,597 | INFO     | -- intersect: 2731877352.310484
[2024-05-15 09:15:32] 2024-05-15 07:15:17,597 | INFO     | intersect: 2731877352.310484
[2024-05-15 09:15:32] 2024-05-15 07:15:17,597 | INFO     | chi2: 0.005499860950506971
[2024-05-15 09:15:32] 2024-05-15 07:15:17,598 | INFO     | current chi2=0.005499860950506971 (change=9.311849861317304 %)
[2024-05-15 09:15:32] 2024-05-15 07:15:17,598 | INFO     | left removable region: 40
[2024-05-15 09:15:32] 2024-05-15 07:15:17,598 | INFO     | model: linear, x: [1715745370.0, 1715745431.0, 1715745492.0, 1715745553.0, 1715745614.0, 1715745675.0, 1715745736.0, 1715745797.0, 1715745858.0, 1715745919.0, 1715
[2024-05-15 09:15:32] 2024-05-15 07:15:17,598 | INFO     | sum of square deviations: 2126802667.5
[2024-05-15 09:15:32] 2024-05-15 07:15:17,599 | INFO     | sum of deviations: -2034835804.0000002
[2024-05-15 09:15:32] 2024-05-15 07:15:17,599 | INFO     | mean x: 1715751134.5
[2024-05-15 09:15:32] 2024-05-15 07:15:17,599 | INFO     | mean y: 2351313.6842105263
[2024-05-15 09:15:32] 2024-05-15 07:15:17,599 | INFO     | -- intersect: 1643910209.85492
[2024-05-15 09:15:32] 2024-05-15 07:15:17,599 | INFO     | intersect: 1643910209.85492
[2024-05-15 09:15:32] 2024-05-15 07:15:17,599 | INFO     | chi2: 0.004211736943372403
[2024-05-15 09:15:32] 2024-05-15 07:15:17,599 | INFO     | -- intersect: 1643910209.85492
[2024-05-15 09:15:32] 2024-05-15 07:15:17,599 | INFO     | current memory leak: -0.96 B/s (using 190 data points, chi2=0.00)
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | ..............................
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | . Timing measurements:
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | . get job = 0 s
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | . initial setup = 0 s
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | . payload setup = 4 s
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | . stage-in = 0 s
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | . payload execution = 14380 s
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | . stage-out = 1 s
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | . log creation = 0 s
[2024-05-15 09:15:32] 2024-05-15 07:15:17,600 | INFO     | ..............................
[2024-05-15 09:15:32] 2024-05-15 07:15:17,659 | INFO     | 
[2024-05-15 09:15:32] 2024-05-15 07:15:17,659 | INFO     | job summary report
[2024-05-15 09:15:32] 2024-05-15 07:15:17,659 | INFO     | --------------------------------------------------
[2024-05-15 09:15:32] 2024-05-15 07:15:17,659 | INFO     | PanDA job id: 6205812371
[2024-05-15 09:15:32] 2024-05-15 07:15:17,659 | INFO     | task id: 38776125
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | errors: (none)
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | pilot state: finished 
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | transexitcode: 0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | exeerrorcode: 0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | exeerrordiag: 
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | exitcode: 0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | exitmsg: OK
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | cpuconsumptiontime: 54203 s
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | nevents: 400
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | neventsw: 0
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | pid: 2686409
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | pgrp: 2686409
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | corecount: 4
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | event service: False
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | sizes: {0: 2394466, 4: 2394672, 11: 2394700, 14388: 2425375, 14389: 2434357, 14392: 2434413, 14396: 2434711}
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | --------------------------------------------------
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | 
[2024-05-15 09:15:32] 2024-05-15 07:15:17,660 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-15 09:15:32] 2024-05-15 07:15:17,677 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,679 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 09:15:32] 2024-05-15 07:15:17,679 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,679 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 09:15:32] 2024-05-15 07:15:17,679 | INFO     | job 6205812371 has completed (purged errors)
[2024-05-15 09:15:32] 2024-05-15 07:15:17,679 | INFO     | overall cleanup function is called
[2024-05-15 09:15:32] 2024-05-15 07:15:18,685 | INFO     | --- collectZombieJob: --- 10, [2686409]
[2024-05-15 09:15:32] 2024-05-15 07:15:18,686 | INFO     | zombie collector waiting for pid 2686409
[2024-05-15 09:15:32] 2024-05-15 07:15:18,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 09:15:32] 2024-05-15 07:15:19,690 | INFO     | collected zombie processes
[2024-05-15 09:15:32] 2024-05-15 07:15:19,691 | INFO     | will now attempt to kill all subprocesses of pid=2686409
[2024-05-15 09:15:32] 2024-05-15 07:15:19,873 | INFO     | process IDs to be killed: [2686409] (in reverse order)
[2024-05-15 09:15:32] 2024-05-15 07:15:20,018 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 09:15:32] 2024-05-15 07:15:20,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 09:15:32] 2024-05-15 07:15:20,030 | INFO     | did not find any defunct processes belonging to 2686409
[2024-05-15 09:15:32] 2024-05-15 07:15:20,041 | INFO     | did not find any defunct processes belonging to 2686409
[2024-05-15 09:15:32] 2024-05-15 07:15:20,041 | INFO     | ready for new job
[2024-05-15 09:15:32] 2024-05-15 07:15:20,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 09:15:32] 2024-05-15 07:15:20,044 | INFO     | *************************************
[2024-05-15 09:15:32] 2024-05-15 07:15:20,044 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 09:15:32] 2024-05-15 07:15:20,044 | INFO     | *************************************
[2024-05-15 09:15:32] 2024-05-15 07:15:20,044 | INFO     | 
[2024-05-15 09:15:32] 2024-05-15 07:15:20,048 | INFO     | architecture information:
[2024-05-15 09:15:32] 2024-05-15 07:15:20,049 | INFO     | executing command: cat /etc/os-release
[2024-05-15 09:15:32] 2024-05-15 07:15:20,075 | INFO     | cat /etc/os-release:
[2024-05-15 09:15:32] NAME="CentOS Linux"
[2024-05-15 09:15:32] VERSION="7 (Core)"
[2024-05-15 09:15:32] ID="centos"
[2024-05-15 09:15:32] ID_LIKE="rhel fedora"
[2024-05-15 09:15:32] VERSION_ID="7"
[2024-05-15 09:15:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 09:15:32] ANSI_COLOR="0;31"
[2024-05-15 09:15:32] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 09:15:32] HOME_URL="https://www.centos.org/"
[2024-05-15 09:15:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 09:15:32] 
[2024-05-15 09:15:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 09:15:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 09:15:32] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 09:15:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 09:15:32] 
[2024-05-15 09:15:32] 2024-05-15 07:15:20,076 | INFO     | *************************************
[2024-05-15 09:15:32] 2024-05-15 07:15:20,579 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-15 09:15:32] 2024-05-15 07:15:20,600 | INFO     | sufficient remaining disk space (591797420032 B)
[2024-05-15 09:15:32] 2024-05-15 07:15:20,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 09:15:32] 2024-05-15 07:15:20,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 09:15:32] 2024-05-15 07:15:20,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 09:15:32] 2024-05-15 07:15:20,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 09:15:32] 2024-05-15 07:15:20,602 | INFO     | aborting loop
[2024-05-15 09:15:32] 2024-05-15 07:15:20,727 | INFO     | all payload control threads have been joined
[2024-05-15 09:15:32] 2024-05-15 07:15:21,021 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 09:15:32] 2024-05-15 07:15:21,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 09:15:32] 2024-05-15 07:15:21,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 09:15:32] 2024-05-15 07:15:21,117 | INFO     | all data control threads have been joined
[2024-05-15 09:15:32] 2024-05-15 07:15:21,181 | INFO     | all job control threads have been joined
[2024-05-15 09:15:32] 2024-05-15 07:15:21,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 09:15:32] 2024-05-15 07:15:21,606 | INFO     | [job] retrieve thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:21,607 | INFO     | [job] job monitor thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:21,731 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:21,732 | INFO     | [payload] control thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:21,984 | INFO     | [job] validate thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:22,045 | INFO     | [payload] validate_post thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:22,059 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:22,123 | INFO     | [data] control thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:22,187 | INFO     | [job] control thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:22,340 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:22,501 | INFO     | [data] copytool_in thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:22,584 | INFO     | [payload] failed_post thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:22,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 09:15:32] 2024-05-15 07:15:22,750 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:23,471 | INFO     | [data] copytool_out thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:23,674 | INFO     | [job] queue monitor thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:24,607 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 09:15:32] 2024-05-15 07:15:26,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47565050573888)>', '<ExcThread(monitor, started 47565571651328)>']
[2024-05-15 09:15:32] 2024-05-15 07:15:27,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 09:15:32] 2024-05-15 07:15:27,052 | INFO     | [monitor] control thread has ended
[2024-05-15 09:15:32] 2024-05-15 07:15:31,416 | INFO     | all workflow threads have been joined
[2024-05-15 09:15:32] 2024-05-15 07:15:31,417 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 09:15:32] 2024-05-15 07:15:31,417 | INFO     | traces error code: 0
[2024-05-15 09:15:32] 2024-05-15 07:15:31,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 09:15:32] 2024-05-15 07:15:31,520 [wrapper] ==== pilot stdout END ====
[2024-05-15 09:15:32] 2024-05-15 07:15:31,523 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 09:15:32] 2024-05-15 07:15:31,526 [wrapper] pilotpid: 2679390
[2024-05-15 09:15:32] 2024-05-15 07:15:31,531 [wrapper] Pilot exit status: 0
[2024-05-15 09:15:32] 2024-05-15 07:15:31,541 [wrapper] pandaids: 6205812371 6205812371
[2024-05-15 09:15:32] 2024-05-15 07:15:31,627 [wrapper] cleanup: SIGTERM to supervisor_pilot 3249202 2679391
[2024-05-15 09:15:32] 2024-05-15 07:15:31,630 [wrapper] Test setup, not cleaning
[2024-05-15 09:15:32] 2024-05-15 07:15:31,633 [wrapper] ==== wrapper stdout END ====
[2024-05-15 09:15:32] 2024-05-15 07:15:31,635 [wrapper] ==== wrapper stderr END ====
[2024-05-15 09:15:32] 2024-05-15 07:15:31,640 [wrapper] apfmon messages muted
[2024-05-15 09:15:32]  *** Error codes and diagnostics ***
[2024-05-15 09:15:32]     "exeErrorCode": 0,
[2024-05-15 09:15:32]     "exeErrorDiag": "",
[2024-05-15 09:15:32]     "pilotErrorCode": 0,
[2024-05-15 09:15:32]     "pilotErrorDiag": "",
[2024-05-15 09:15:32]  *** Listing of results directory ***
[2024-05-15 09:15:32] total 1424120
[2024-05-15 09:15:32] drwx------ 4 boinc boinc      4096 May  8 14:24 pilot3
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc    467845 May 13 11:03 pilot3.tar.gz
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc      5633 May 13 11:10 queuedata.json
[2024-05-15 09:15:32] -rwx------ 1 boinc boinc     32251 May 13 11:11 runpilot2-wrapper.sh
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc       100 May 15 01:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 09:15:32] -rwxr-xr-x 1 boinc boinc      7986 May 15 01:11 run_atlas
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc       105 May 15 01:11 job.xml
[2024-05-15 09:15:32] -rw-r--r-- 3 boinc boinc 602945493 May 15 01:11 EVNT.38776119._000157.pool.root.1
[2024-05-15 09:15:32] -rw-r--r-- 3 boinc boinc 602945493 May 15 01:11 ATLAS.root_0
[2024-05-15 09:15:32] -rw-r--r-- 2 boinc boinc     17537 May 15 01:11 start_atlas.sh
[2024-05-15 09:15:32] drwxrwx--x 2 boinc boinc      4096 May 15 01:11 shared
[2024-05-15 09:15:32] -rw-r--r-- 2 boinc boinc    479997 May 15 01:11 input.tar.gz
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc         0 May 15 01:11 boinc_lockfile
[2024-05-15 09:15:32] -rw------- 1 boinc boinc   1324588 May 15 01:11 cric_ddmendpoints.json
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc      2639 May 15 05:15 pandaJob.out
[2024-05-15 09:15:32] -rw------- 1 boinc boinc       424 May 15 05:15 setup.sh.local
[2024-05-15 09:15:32] -rw------- 1 boinc boinc   1008600 May 15 05:15 agis_schedconf.cvmfs.json
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc      6671 May 15 07:13 init_data.xml
[2024-05-15 09:15:32] -rw------- 1 boinc boinc 245210713 May 15 09:14 HITS.38776125._003447.pool.root.1
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc       533 May 15 09:14 boinc_task_state.xml
[2024-05-15 09:15:32] -rw------- 1 boinc boinc        97 May 15 09:14 pilot_heartbeat.json
[2024-05-15 09:15:32] -rw------- 1 boinc boinc      1048 May 15 09:15 memory_monitor_summary.json
[2024-05-15 09:15:32] -rw------- 1 boinc boinc         0 May 15 09:15 agis_ddmendpoints.agis.ALL.json
[2024-05-15 09:15:32] -rw------- 1 boinc boinc    329476 May 15 09:15 log.38776125._003447.job.log.tgz.1
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc      8192 May 15 09:15 boinc_mmap_file
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc        29 May 15 09:15 wrapper_checkpoint.txt
[2024-05-15 09:15:32] -rw------- 1 boinc boinc      7774 May 15 09:15 heartbeat.json
[2024-05-15 09:15:32] -rw------- 1 boinc boinc      4221 May 15 09:15 pilotlog.txt
[2024-05-15 09:15:32] -rw------- 1 boinc boinc   1501656 May 15 09:15 log.38776125._003447.job.log.1
[2024-05-15 09:15:32] -rw------- 1 boinc boinc       357 May 15 09:15 output.list
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc       620 May 15 09:15 runtime_log
[2024-05-15 09:15:32] -rw------- 1 boinc boinc   1853440 May 15 09:15 result.tar.gz
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc     11487 May 15 09:15 runtime_log.err
[2024-05-15 09:15:32] -rw------- 1 boinc boinc       771 May 15 09:15 J2CNDmatgQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmx9JKDmglm4Wo.diag
[2024-05-15 09:15:32] -rw-r--r-- 1 boinc boinc     23205 May 15 09:15 stderr.txt
[2024-05-15 09:15:32] HITS file was successfully produced:
[2024-05-15 09:15:32] -rw------- 1 boinc boinc 245210713 May 15 09:14 shared/HITS.pool.root.1
[2024-05-15 09:15:32]  *** Contents of shared directory: ***
[2024-05-15 09:15:32] total 830592
[2024-05-15 09:15:32] -rw-r--r-- 3 boinc boinc 602945493 May 15 01:11 ATLAS.root_0
[2024-05-15 09:15:32] -rw-r--r-- 2 boinc boinc     17537 May 15 01:11 start_atlas.sh
[2024-05-15 09:15:32] -rw-r--r-- 2 boinc boinc    479997 May 15 01:11 input.tar.gz
[2024-05-15 09:15:32] -rw------- 1 boinc boinc 245210713 May 15 09:14 HITS.pool.root.1
[2024-05-15 09:15:32] -rw------- 1 boinc boinc   1853440 May 15 09:15 result.tar.gz
09:15:33 (2672601): run_atlas exited; CPU time 53876.481388
09:15:33 (2672601): called boinc_finish(0)

</stderr_txt>
]]>

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