Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:06:49 (648404): wrapper (7.7.26015): starting
16:06:49 (648404): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 16:06:49] Arguments: --nthreads 4
[2024-05-15 16:06:49] Threads: 4
[2024-05-15 16:06:49] Checking for CVMFS
[2024-05-15 16:06:49] No cvmfs_config command found, will try listing directly
[2024-05-15 16:06:49] CVMFS is ok
[2024-05-15 16:06:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 16:06:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 16:06:49] Further information can be found at the LHC@home message board.
[2024-05-15 16:06:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 16:06:49] Checking for apptainer binary...
[2024-05-15 16:06:49] which: no apptainer in ((null))
[2024-05-15 16:06:49] apptainer is not installed, using version from CVMFS
[2024-05-15 16:06:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 16:06:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2024-05-15 16:06:50] apptainer works
[2024-05-15 16:06:50] Set ATHENA_PROC_NUMBER=4
[2024-05-15 16:06:50] Set ATHENA_CORE_NUMBER=4
[2024-05-15 16:06:50] Starting ATLAS job with PandaID=6205825004
[2024-05-15 16:06:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 20:22:17]  *** The last 200 lines of the pilot log: ***
[2024-05-15 20:22:17] 2024-05-15 18:21:59,584 | WARNING  | GPU info not found in prmon json
[2024-05-15 20:22:17] 2024-05-15 18:21:59,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-15 20:22:17] 2024-05-15 18:21:59,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 20:22:17] 2024-05-15 18:21:59,589 | INFO     | fitting pss+swap vs Time
[2024-05-15 20:22:17] 2024-05-15 18:21:59,590 | INFO     | model: linear, x: [1715782042.0, 1715782103.0, 1715782164.0, 1715782225.0, 1715782286.0, 1715782347.0, 1715782408.0, 1715782469.0, 1715782530.0, 1715782591.0, 1715
[2024-05-15 20:22:17] 2024-05-15 18:21:59,590 | INFO     | sum of square deviations: 4903347750.0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,592 | INFO     | sum of deviations: 95824740973.0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,592 | INFO     | mean x: 1715789667.0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,592 | INFO     | mean y: 2291397.047808765
[2024-05-15 20:22:17] 2024-05-15 18:21:59,592 | INFO     | -- intersect: -33528901736.13858
[2024-05-15 20:22:17] 2024-05-15 18:21:59,592 | INFO     | intersect: -33528901736.13858
[2024-05-15 20:22:17] 2024-05-15 18:21:59,593 | INFO     | chi2: 4.847092239124466
[2024-05-15 20:22:17] 2024-05-15 18:21:59,593 | INFO     | model: linear, x: [1715782042.0, 1715782103.0, 1715782164.0, 1715782225.0, 1715782286.0, 1715782347.0, 1715782408.0, 1715782469.0, 1715782530.0, 1715782591.0, 1715
[2024-05-15 20:22:17] 2024-05-15 18:21:59,593 | INFO     | sum of square deviations: 4616114457.5
[2024-05-15 20:22:17] 2024-05-15 18:21:59,595 | INFO     | sum of deviations: 109277823438.49998
[2024-05-15 20:22:17] 2024-05-15 18:21:59,595 | INFO     | mean x: 1715789514.5
[2024-05-15 20:22:17] 2024-05-15 18:21:59,596 | INFO     | mean y: 2298402.337398374
[2024-05-15 20:22:17] 2024-05-15 18:21:59,596 | INFO     | -- intersect: -40615789677.89314
[2024-05-15 20:22:17] 2024-05-15 18:21:59,596 | INFO     | intersect: -40615789677.89314
[2024-05-15 20:22:17] 2024-05-15 18:21:59,596 | INFO     | chi2: 4.067164790298708
[2024-05-15 20:22:17] 2024-05-15 18:21:59,596 | INFO     | current chi2=4.067164790298708 (change=16.09062527282618 %)
[2024-05-15 20:22:17] 2024-05-15 18:21:59,596 | INFO     | right removable region: 245
[2024-05-15 20:22:17] 2024-05-15 18:21:59,597 | INFO     | model: linear, x: [1715782347.0, 1715782408.0, 1715782469.0, 1715782530.0, 1715782591.0, 1715782652.0, 1715782713.0, 1715782774.0, 1715782835.0, 1715782896.0, 1715
[2024-05-15 20:22:17] 2024-05-15 18:21:59,597 | INFO     | sum of square deviations: 4616114457.5
[2024-05-15 20:22:17] 2024-05-15 18:21:59,599 | INFO     | sum of deviations: 40636121028.5
[2024-05-15 20:22:17] 2024-05-15 18:21:59,599 | INFO     | mean x: 1715789819.5
[2024-05-15 20:22:17] 2024-05-15 18:21:59,599 | INFO     | mean y: 2320630.5894308942
[2024-05-15 20:22:17] 2024-05-15 18:21:59,599 | INFO     | -- intersect: -15101950159.617716
[2024-05-15 20:22:17] 2024-05-15 18:21:59,599 | INFO     | intersect: -15101950159.617716
[2024-05-15 20:22:17] 2024-05-15 18:21:59,600 | INFO     | chi2: 2.5701029354919855
[2024-05-15 20:22:17] 2024-05-15 18:21:59,600 | INFO     | current chi2=2.5701029354919855 (change=46.97639721508116 %)
[2024-05-15 20:22:17] 2024-05-15 18:21:59,600 | INFO     | model: linear, x: [1715782652.0, 1715782713.0, 1715782774.0, 1715782835.0, 1715782896.0, 1715782957.0, 1715783018.0, 1715783079.0, 1715783140.0, 1715783201.0, 1715
[2024-05-15 20:22:17] 2024-05-15 18:21:59,600 | INFO     | sum of square deviations: 4340323240.0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,602 | INFO     | sum of deviations: -9089742553.0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,602 | INFO     | mean x: 1715789972.0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,602 | INFO     | mean y: 2348129.8381742737
[2024-05-15 20:22:17] 2024-05-15 18:21:59,602 | INFO     | -- intersect: 3595649425.181117
[2024-05-15 20:22:17] 2024-05-15 18:21:59,602 | INFO     | intersect: 3595649425.181117
[2024-05-15 20:22:17] 2024-05-15 18:21:59,603 | INFO     | chi2: 0.9081719402218028
[2024-05-15 20:22:17] 2024-05-15 18:21:59,603 | INFO     | current chi2=0.9081719402218028 (change=64.66398572289266 %)
[2024-05-15 20:22:17] 2024-05-15 18:21:59,603 | INFO     | model: linear, x: [1715782957.0, 1715783018.0, 1715783079.0, 1715783140.0, 1715783201.0, 1715783262.0, 1715783323.0, 1715783384.0, 1715783445.0, 1715783506.0, 1715
[2024-05-15 20:22:17] 2024-05-15 18:21:59,603 | INFO     | sum of square deviations: 4075741535.0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,605 | INFO     | sum of deviations: -15545605694.999998
[2024-05-15 20:22:17] 2024-05-15 18:21:59,605 | INFO     | mean x: 1715790124.5
[2024-05-15 20:22:17] 2024-05-15 18:21:59,605 | INFO     | mean y: 2351799.13559322
[2024-05-15 20:22:17] 2024-05-15 18:21:59,606 | INFO     | -- intersect: 6546681585.948721
[2024-05-15 20:22:17] 2024-05-15 18:21:59,606 | INFO     | intersect: 6546681585.948721
[2024-05-15 20:22:17] 2024-05-15 18:21:59,606 | INFO     | chi2: 0.8245252592660884
[2024-05-15 20:22:17] 2024-05-15 18:21:59,606 | INFO     | current chi2=0.8245252592660884 (change=9.21044542901043 %)
[2024-05-15 20:22:17] 2024-05-15 18:21:59,606 | INFO     | left removable region: 30
[2024-05-15 20:22:17] 2024-05-15 18:21:59,606 | INFO     | model: linear, x: [1715783872.0, 1715783933.0, 1715783994.0, 1715784055.0, 1715784116.0, 1715784177.0, 1715784238.0, 1715784299.0, 1715784360.0, 1715784421.0, 1715
[2024-05-15 20:22:17] 2024-05-15 18:21:59,607 | INFO     | sum of square deviations: 3081657780.0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,608 | INFO     | sum of deviations: 2435461050.9999995
[2024-05-15 20:22:17] 2024-05-15 18:21:59,608 | INFO     | mean x: 1715790399.0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,608 | INFO     | mean y: 2358320.288372093
[2024-05-15 20:22:17] 2024-05-15 18:21:59,608 | INFO     | -- intersect: -1353645813.4491024
[2024-05-15 20:22:17] 2024-05-15 18:21:59,609 | INFO     | intersect: -1353645813.4491024
[2024-05-15 20:22:17] 2024-05-15 18:21:59,609 | INFO     | chi2: 0.002752092450869385
[2024-05-15 20:22:17] 2024-05-15 18:21:59,609 | INFO     | -- intersect: -1353645813.4491024
[2024-05-15 20:22:17] 2024-05-15 18:21:59,609 | INFO     | current memory leak: 0.79 B/s (using 215 data points, chi2=0.00)
[2024-05-15 20:22:17] 2024-05-15 18:21:59,610 | INFO     | ..............................
[2024-05-15 20:22:17] 2024-05-15 18:21:59,610 | INFO     | . Timing measurements:
[2024-05-15 20:22:17] 2024-05-15 18:21:59,610 | INFO     | . get job = 0 s
[2024-05-15 20:22:17] 2024-05-15 18:21:59,610 | INFO     | . initial setup = 1 s
[2024-05-15 20:22:17] 2024-05-15 18:21:59,610 | INFO     | . payload setup = 4 s
[2024-05-15 20:22:17] 2024-05-15 18:21:59,610 | INFO     | . stage-in = 0 s
[2024-05-15 20:22:17] 2024-05-15 18:21:59,610 | INFO     | . payload execution = 15272 s
[2024-05-15 20:22:17] 2024-05-15 18:21:59,610 | INFO     | . stage-out = 0 s
[2024-05-15 20:22:17] 2024-05-15 18:21:59,610 | INFO     | . log creation = 0 s
[2024-05-15 20:22:17] 2024-05-15 18:21:59,611 | INFO     | ..............................
[2024-05-15 20:22:17] 2024-05-15 18:21:59,669 | INFO     | 
[2024-05-15 20:22:17] 2024-05-15 18:21:59,669 | INFO     | job summary report
[2024-05-15 20:22:17] 2024-05-15 18:21:59,669 | INFO     | --------------------------------------------------
[2024-05-15 20:22:17] 2024-05-15 18:21:59,669 | INFO     | PanDA job id: 6205825004
[2024-05-15 20:22:17] 2024-05-15 18:21:59,669 | INFO     | task id: 38776146
[2024-05-15 20:22:17] 2024-05-15 18:21:59,669 | INFO     | errors: (none)
[2024-05-15 20:22:17] 2024-05-15 18:21:59,669 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 20:22:17] 2024-05-15 18:21:59,669 | INFO     | pilot state: finished 
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | transexitcode: 0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | exeerrorcode: 0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | exeerrordiag: 
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | exitcode: 0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | exitmsg: OK
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | cpuconsumptiontime: 58383 s
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | nevents: 400
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | neventsw: 0
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | pid: 659812
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | pgrp: 659812
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | corecount: 4
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | event service: False
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | sizes: {0: 2395112, 1: 2396659, 4: 2396865, 11: 2396893, 15281: 2427959, 15282: 2437125, 15287: 2437239}
[2024-05-15 20:22:17] 2024-05-15 18:21:59,670 | INFO     | --------------------------------------------------
[2024-05-15 20:22:17] 2024-05-15 18:21:59,671 | INFO     | 
[2024-05-15 20:22:17] 2024-05-15 18:21:59,671 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-05-15 20:22:17] 2024-05-15 18:21:59,693 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,693 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,695 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 20:22:17] 2024-05-15 18:21:59,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,695 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 20:22:17] 2024-05-15 18:21:59,695 | INFO     | job 6205825004 has completed (purged errors)
[2024-05-15 20:22:17] 2024-05-15 18:21:59,696 | INFO     | overall cleanup function is called
[2024-05-15 20:22:17] 2024-05-15 18:22:00,703 | INFO     | --- collectZombieJob: --- 10, [659812]
[2024-05-15 20:22:17] 2024-05-15 18:22:00,703 | INFO     | zombie collector waiting for pid 659812
[2024-05-15 20:22:17] 2024-05-15 18:22:00,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 20:22:17] 2024-05-15 18:22:01,710 | INFO     | collected zombie processes
[2024-05-15 20:22:17] 2024-05-15 18:22:01,710 | INFO     | will now attempt to kill all subprocesses of pid=659812
[2024-05-15 20:22:17] 2024-05-15 18:22:01,957 | INFO     | process IDs to be killed: [659812] (in reverse order)
[2024-05-15 20:22:17] 2024-05-15 18:22:02,145 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 20:22:17] 2024-05-15 18:22:02,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 20:22:17] 2024-05-15 18:22:02,154 | INFO     | did not find any defunct processes belonging to 659812
[2024-05-15 20:22:17] 2024-05-15 18:22:02,161 | INFO     | did not find any defunct processes belonging to 659812
[2024-05-15 20:22:17] 2024-05-15 18:22:02,161 | INFO     | ready for new job
[2024-05-15 20:22:17] 2024-05-15 18:22:02,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 20:22:17] 2024-05-15 18:22:02,163 | INFO     | *************************************
[2024-05-15 20:22:17] 2024-05-15 18:22:02,163 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 20:22:17] 2024-05-15 18:22:02,163 | INFO     | *************************************
[2024-05-15 20:22:17] 2024-05-15 18:22:02,163 | INFO     | 
[2024-05-15 20:22:17] 2024-05-15 18:22:02,166 | INFO     | architecture information:
[2024-05-15 20:22:17] 2024-05-15 18:22:02,166 | INFO     | executing command: cat /etc/os-release
[2024-05-15 20:22:17] 2024-05-15 18:22:02,181 | INFO     | cat /etc/os-release:
[2024-05-15 20:22:17] NAME="CentOS Linux"
[2024-05-15 20:22:17] VERSION="7 (Core)"
[2024-05-15 20:22:17] ID="centos"
[2024-05-15 20:22:17] ID_LIKE="rhel fedora"
[2024-05-15 20:22:17] VERSION_ID="7"
[2024-05-15 20:22:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 20:22:17] ANSI_COLOR="0;31"
[2024-05-15 20:22:17] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 20:22:17] HOME_URL="https://www.centos.org/"
[2024-05-15 20:22:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 20:22:17] 
[2024-05-15 20:22:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 20:22:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 20:22:17] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 20:22:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 20:22:17] 
[2024-05-15 20:22:17] 2024-05-15 18:22:02,182 | INFO     | *************************************
[2024-05-15 20:22:17] 2024-05-15 18:22:02,684 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-05-15 20:22:17] 2024-05-15 18:22:02,704 | INFO     | sufficient remaining disk space (591890743296 B)
[2024-05-15 20:22:17] 2024-05-15 18:22:02,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 20:22:17] 2024-05-15 18:22:02,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 20:22:17] 2024-05-15 18:22:02,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 20:22:17] 2024-05-15 18:22:02,705 | INFO     | aborting loop
[2024-05-15 20:22:17] 2024-05-15 18:22:02,751 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 20:22:17] 2024-05-15 18:22:02,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 20:22:17] 2024-05-15 18:22:02,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 20:22:17] 2024-05-15 18:22:02,756 | INFO     | all payload control threads have been joined
[2024-05-15 20:22:17] 2024-05-15 18:22:03,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 20:22:17] 2024-05-15 18:22:03,710 | INFO     | [job] job monitor thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:03,710 | INFO     | [job] retrieve thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:03,761 | INFO     | [payload] control thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:03,782 | INFO     | all data control threads have been joined
[2024-05-15 20:22:17] 2024-05-15 18:22:03,999 | INFO     | [payload] failed_post thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:04,087 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:04,362 | INFO     | all job control threads have been joined
[2024-05-15 20:22:17] 2024-05-15 18:22:04,451 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:04,451 | INFO     | [data] copytool_in thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:04,597 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:04,678 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 20:22:17] 2024-05-15 18:22:04,694 | INFO     | [job] validate thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:04,735 | INFO     | [payload] validate_post thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:04,786 | INFO     | [data] control thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:04,817 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:05,140 | INFO     | [data] copytool_out thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:05,368 | INFO     | [job] control thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:05,681 | INFO     | [job] queue monitor thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:05,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 20:22:17] 2024-05-15 18:22:09,684 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 20:22:17] 2024-05-15 18:22:10,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47383412499520)>', '<ExcThread(monitor, started 47383592154880)>']
[2024-05-15 20:22:17] 2024-05-15 18:22:11,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 20:22:17] 2024-05-15 18:22:11,796 | INFO     | [monitor] control thread has ended
[2024-05-15 20:22:17] 2024-05-15 18:22:15,933 | INFO     | all workflow threads have been joined
[2024-05-15 20:22:17] 2024-05-15 18:22:15,933 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 20:22:17] 2024-05-15 18:22:15,933 | INFO     | traces error code: 0
[2024-05-15 20:22:17] 2024-05-15 18:22:15,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 20:22:17] 2024-05-15 18:22:16,002 [wrapper] ==== pilot stdout END ====
[2024-05-15 20:22:17] 2024-05-15 18:22:16,005 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 20:22:17] 2024-05-15 18:22:16,007 [wrapper] pilotpid: 652753
[2024-05-15 20:22:17] 2024-05-15 18:22:16,010 [wrapper] Pilot exit status: 0
[2024-05-15 20:22:17] 2024-05-15 18:22:16,017 [wrapper] pandaids: 6205825004
[2024-05-15 20:22:17] 2024-05-15 18:22:16,105 [wrapper] cleanup: SIGTERM to supervisor_pilot 1276395 652754
[2024-05-15 20:22:17] 2024-05-15 18:22:16,107 [wrapper] Test setup, not cleaning
[2024-05-15 20:22:17] 2024-05-15 18:22:16,109 [wrapper] ==== wrapper stdout END ====
[2024-05-15 20:22:17] 2024-05-15 18:22:16,112 [wrapper] ==== wrapper stderr END ====
[2024-05-15 20:22:17] 2024-05-15 18:22:16,116 [wrapper] apfmon messages muted
[2024-05-15 20:22:17]  *** Error codes and diagnostics ***
[2024-05-15 20:22:17]     "exeErrorCode": 0,
[2024-05-15 20:22:17]     "exeErrorDiag": "",
[2024-05-15 20:22:17]     "pilotErrorCode": 0,
[2024-05-15 20:22:17]     "pilotErrorDiag": "",
[2024-05-15 20:22:17]  *** Listing of results directory ***
[2024-05-15 20:22:17] total 867992
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc    467845 May 13 10:33 pilot3.tar.gz
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc      5633 May 13 10:42 queuedata.json
[2024-05-15 20:22:17] -rwx------ 1 boinc boinc     32251 May 13 10:43 runpilot2-wrapper.sh
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc       100 May 15 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 20:22:17] -rwxr-xr-x 1 boinc boinc      7986 May 15 16:06 run_atlas
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc       105 May 15 16:06 job.xml
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc      6663 May 15 16:06 init_data.xml
[2024-05-15 20:22:17] -rw-r--r-- 2 boinc boinc 614273733 May 15 16:06 EVNT.38776140._000135.pool.root.1
[2024-05-15 20:22:17] -rw-r--r-- 2 boinc boinc     17537 May 15 16:06 start_atlas.sh
[2024-05-15 20:22:17] drwxrwx--x 2 boinc boinc      4096 May 15 16:06 shared
[2024-05-15 20:22:17] -rw-r--r-- 2 boinc boinc    479995 May 15 16:06 input.tar.gz
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc         0 May 15 16:06 boinc_lockfile
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc      2612 May 15 16:06 pandaJob.out
[2024-05-15 20:22:17] -rw------- 1 boinc boinc       424 May 15 16:06 setup.sh.local
[2024-05-15 20:22:17] -rw------- 1 boinc boinc   1010550 May 15 16:06 agis_schedconf.cvmfs.json
[2024-05-15 20:22:17] -rw------- 1 boinc boinc   1325758 May 15 16:06 cric_ddmendpoints.json
[2024-05-15 20:22:17] drwx------ 4 boinc boinc      4096 May 15 16:06 pilot3
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc       531 May 15 20:21 boinc_task_state.xml
[2024-05-15 20:22:17] -rw------- 1 boinc boinc 267026746 May 15 20:21 HITS.38776146._003360.pool.root.1
[2024-05-15 20:22:17] -rw------- 1 boinc boinc        95 May 15 20:21 pilot_heartbeat.json
[2024-05-15 20:22:17] -rw------- 1 boinc boinc      1051 May 15 20:21 memory_monitor_summary.json
[2024-05-15 20:22:17] -rw------- 1 boinc boinc         0 May 15 20:21 agis_ddmendpoints.agis.ALL.json
[2024-05-15 20:22:17] -rw------- 1 boinc boinc    348110 May 15 20:21 log.38776146._003360.job.log.tgz.1
[2024-05-15 20:22:17] -rw------- 1 boinc boinc      7765 May 15 20:21 heartbeat.json
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc      8192 May 15 20:22 boinc_mmap_file
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc        28 May 15 20:22 wrapper_checkpoint.txt
[2024-05-15 20:22:17] -rw------- 1 boinc boinc      4221 May 15 20:22 pilotlog.txt
[2024-05-15 20:22:17] -rw------- 1 boinc boinc   1649058 May 15 20:22 log.38776146._003360.job.log.1
[2024-05-15 20:22:17] -rw------- 1 boinc boinc       357 May 15 20:22 output.list
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc       620 May 15 20:22 runtime_log
[2024-05-15 20:22:17] -rw------- 1 boinc boinc   2017280 May 15 20:22 result.tar.gz
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc     11410 May 15 20:22 runtime_log.err
[2024-05-15 20:22:17] -rw------- 1 boinc boinc       658 May 15 20:22 nZgMDmPSgQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDml2JKDmRoV4tm.diag
[2024-05-15 20:22:17] -rw-r--r-- 1 boinc boinc     21257 May 15 20:22 stderr.txt
[2024-05-15 20:22:17] HITS file was successfully produced:
[2024-05-15 20:22:17] -rw------- 1 boinc boinc 267026746 May 15 20:21 shared/HITS.pool.root.1
[2024-05-15 20:22:17]  *** Contents of shared directory: ***
[2024-05-15 20:22:17] total 863124
[2024-05-15 20:22:17] -rw-r--r-- 2 boinc boinc 614273733 May 15 16:06 ATLAS.root_0
[2024-05-15 20:22:17] -rw-r--r-- 2 boinc boinc     17537 May 15 16:06 start_atlas.sh
[2024-05-15 20:22:17] -rw-r--r-- 2 boinc boinc    479995 May 15 16:06 input.tar.gz
[2024-05-15 20:22:17] -rw------- 1 boinc boinc 267026746 May 15 20:21 HITS.pool.root.1
[2024-05-15 20:22:17] -rw------- 1 boinc boinc   2017280 May 15 20:22 result.tar.gz
20:22:18 (648404): run_atlas exited; CPU time 58074.871288
20:22:18 (648404): called boinc_finish(0)

</stderr_txt>
]]>

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