Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:42:50 (380107): wrapper (7.7.26015): starting
11:42:50 (380107): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 11:42:50] Arguments: --nthreads 4
[2024-05-17 11:42:50] Threads: 4
[2024-05-17 11:42:50] Checking for CVMFS
[2024-05-17 11:42:50] No cvmfs_config command found, will try listing directly
[2024-05-17 11:42:50] CVMFS is ok
[2024-05-17 11:42:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 11:42:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 11:42:50] Further information can be found at the LHC@home message board.
[2024-05-17 11:42:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 11:42:50] Checking for apptainer binary...
[2024-05-17 11:42:50] which: no apptainer in ((null))
[2024-05-17 11:42:50] apptainer is not installed, using version from CVMFS
[2024-05-17 11:42:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 11:42:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-05-17 11:42:52] apptainer works
[2024-05-17 11:42:52] Set ATHENA_PROC_NUMBER=4
[2024-05-17 11:42:52] Set ATHENA_CORE_NUMBER=4
[2024-05-17 11:42:52] Starting ATLAS job with PandaID=6205824284
[2024-05-17 11:42:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 15:29:05]  *** The last 200 lines of the pilot log: ***
[2024-05-17 15:29:05] 2024-05-17 13:28:51,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 15:29:05] 2024-05-17 13:28:51,735 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 15:29:05] 2024-05-17 13:28:51,737 | INFO     | fitting pss+swap vs Time
[2024-05-17 15:29:05] 2024-05-17 13:28:51,737 | INFO     | model: linear, x: [1715939003.0, 1715939064.0, 1715939125.0, 1715939186.0, 1715939247.0, 1715939308.0, 1715939369.0, 1715939430.0, 1715939491.0, 1715939552.0, 1715
[2024-05-17 15:29:05] 2024-05-17 13:28:51,737 | INFO     | sum of square deviations: 3392567795.5
[2024-05-17 15:29:05] 2024-05-17 13:28:51,738 | INFO     | sum of deviations: 72483697923.0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,738 | INFO     | mean x: 1715945743.5
[2024-05-17 15:29:05] 2024-05-17 13:28:51,738 | INFO     | mean y: 2304302.8198198196
[2024-05-17 15:29:05] 2024-05-17 13:28:51,738 | INFO     | -- intersect: -36659628610.972015
[2024-05-17 15:29:05] 2024-05-17 13:28:51,738 | INFO     | intersect: -36659628610.972015
[2024-05-17 15:29:05] 2024-05-17 13:28:51,739 | INFO     | chi2: 3.39710557048157
[2024-05-17 15:29:05] 2024-05-17 13:28:51,739 | INFO     | model: linear, x: [1715939003.0, 1715939064.0, 1715939125.0, 1715939186.0, 1715939247.0, 1715939308.0, 1715939369.0, 1715939430.0, 1715939491.0, 1715939552.0, 1715
[2024-05-17 15:29:05] 2024-05-17 13:28:51,739 | INFO     | sum of square deviations: 3168461268.0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | sum of deviations: 70681827767.99998
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | mean x: 1715945591.0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | mean y: 2303076.460829493
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | -- intersect: -38276899496.49009
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | intersect: -38276899496.49009
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | chi2: 3.3993859710431757
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | current chi2=3.3993859710431757 (change=-0.06712775079529475 %)
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | right removable region: 216
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | model: linear, x: [1715939308.0, 1715939369.0, 1715939430.0, 1715939491.0, 1715939552.0, 1715939613.0, 1715939674.0, 1715939735.0, 1715939796.0, 1715939857.0, 1715
[2024-05-17 15:29:05] 2024-05-17 13:28:51,740 | INFO     | sum of square deviations: 3168461268.0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,741 | INFO     | sum of deviations: 25263229848.999996
[2024-05-17 15:29:05] 2024-05-17 13:28:51,741 | INFO     | mean x: 1715945896.0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,741 | INFO     | mean y: 2336329.414746544
[2024-05-17 15:29:05] 2024-05-17 13:28:51,741 | INFO     | -- intersect: -13679489614.589893
[2024-05-17 15:29:05] 2024-05-17 13:28:51,741 | INFO     | intersect: -13679489614.589893
[2024-05-17 15:29:05] 2024-05-17 13:28:51,742 | INFO     | chi2: 1.2291593116178094
[2024-05-17 15:29:05] 2024-05-17 13:28:51,742 | INFO     | current chi2=1.2291593116178094 (change=63.81745323729915 %)
[2024-05-17 15:29:05] 2024-05-17 13:28:51,742 | INFO     | model: linear, x: [1715939613.0, 1715939674.0, 1715939735.0, 1715939796.0, 1715939857.0, 1715939918.0, 1715939979.0, 1715940040.0, 1715940101.0, 1715940162.0, 1715
[2024-05-17 15:29:05] 2024-05-17 13:28:51,742 | INFO     | sum of square deviations: 2954447953.0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,743 | INFO     | sum of deviations: -10326523104.000002
[2024-05-17 15:29:05] 2024-05-17 13:28:51,743 | INFO     | mean x: 1715946048.5
[2024-05-17 15:29:05] 2024-05-17 13:28:51,743 | INFO     | mean y: 2361690.9905660376
[2024-05-17 15:29:05] 2024-05-17 13:28:51,743 | INFO     | -- intersect: 6000015667.957666
[2024-05-17 15:29:05] 2024-05-17 13:28:51,743 | INFO     | intersect: 6000015667.957666
[2024-05-17 15:29:05] 2024-05-17 13:28:51,743 | INFO     | chi2: 0.1184618399140932
[2024-05-17 15:29:05] 2024-05-17 13:28:51,743 | INFO     | current chi2=0.1184618399140932 (change=90.3623689139063 %)
[2024-05-17 15:29:05] 2024-05-17 13:28:51,743 | INFO     | model: linear, x: [1715939918.0, 1715939979.0, 1715940040.0, 1715940101.0, 1715940162.0, 1715940223.0, 1715940284.0, 1715940345.0, 1715940406.0, 1715940467.0, 1715
[2024-05-17 15:29:05] 2024-05-17 13:28:51,743 | INFO     | sum of square deviations: 2750295288.0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,744 | INFO     | sum of deviations: -9140818889.999996
[2024-05-17 15:29:05] 2024-05-17 13:28:51,744 | INFO     | mean x: 1715946201.0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,744 | INFO     | mean y: 2360753.4106280194
[2024-05-17 15:29:05] 2024-05-17 13:28:51,744 | INFO     | -- intersect: 5705440534.247794
[2024-05-17 15:29:05] 2024-05-17 13:28:51,744 | INFO     | intersect: 5705440534.247794
[2024-05-17 15:29:05] 2024-05-17 13:28:51,744 | INFO     | chi2: 0.09051058735208854
[2024-05-17 15:29:05] 2024-05-17 13:28:51,744 | INFO     | current chi2=0.09051058735208854 (change=23.595153158413293 %)
[2024-05-17 15:29:05] 2024-05-17 13:28:51,744 | INFO     | left removable region: 30
[2024-05-17 15:29:05] 2024-05-17 13:28:51,745 | INFO     | model: linear, x: [1715940833.0, 1715940894.0, 1715940955.0, 1715941016.0, 1715941077.0, 1715941138.0, 1715941199.0, 1715941260.0, 1715941321.0, 1715941382.0, 1715
[2024-05-17 15:29:05] 2024-05-17 13:28:51,745 | INFO     | sum of square deviations: 1995283922.5
[2024-05-17 15:29:05] 2024-05-17 13:28:51,745 | INFO     | sum of deviations: 3284622835.9999995
[2024-05-17 15:29:05] 2024-05-17 13:28:51,745 | INFO     | mean x: 1715946475.5
[2024-05-17 15:29:05] 2024-05-17 13:28:51,745 | INFO     | mean y: 2350434.8494623657
[2024-05-17 15:29:05] 2024-05-17 13:28:51,745 | INFO     | -- intersect: -2822428993.894225
[2024-05-17 15:29:05] 2024-05-17 13:28:51,745 | INFO     | intersect: -2822428993.894225
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | chi2: 0.0003103621604783186
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | -- intersect: -2822428993.894225
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | current memory leak: 1.65 B/s (using 186 data points, chi2=0.00)
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | ..............................
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | . Timing measurements:
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | . get job = 0 s
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | . initial setup = 1 s
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | . payload setup = 4 s
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | . stage-in = 0 s
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | . payload execution = 13523 s
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | . stage-out = 0 s
[2024-05-17 15:29:05] 2024-05-17 13:28:51,746 | INFO     | . log creation = 0 s
[2024-05-17 15:29:05] 2024-05-17 13:28:51,747 | INFO     | ..............................
[2024-05-17 15:29:05] 2024-05-17 13:28:51,800 | INFO     | 
[2024-05-17 15:29:05] 2024-05-17 13:28:51,800 | INFO     | job summary report
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | --------------------------------------------------
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | PanDA job id: 6205824284
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | task id: 38776146
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | errors: (none)
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | pilot state: finished 
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | transexitcode: 0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | exeerrorcode: 0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | exeerrordiag: 
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | exitcode: 0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | exitmsg: OK
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | cpuconsumptiontime: 51315 s
[2024-05-17 15:29:05] 2024-05-17 13:28:51,801 | INFO     | nevents: 400
[2024-05-17 15:29:05] 2024-05-17 13:28:51,802 | INFO     | neventsw: 0
[2024-05-17 15:29:05] 2024-05-17 13:28:51,802 | INFO     | pid: 391498
[2024-05-17 15:29:05] 2024-05-17 13:28:51,802 | INFO     | pgrp: 391498
[2024-05-17 15:29:05] 2024-05-17 13:28:51,802 | INFO     | corecount: 4
[2024-05-17 15:29:05] 2024-05-17 13:28:51,802 | INFO     | event service: False
[2024-05-17 15:29:05] 2024-05-17 13:28:51,802 | INFO     | sizes: {0: 2392186, 4: 2392392, 11: 2392420, 13532: 2422899, 13533: 2431881, 13534: 2431937, 13538: 2432235}
[2024-05-17 15:29:05] 2024-05-17 13:28:51,802 | INFO     | --------------------------------------------------
[2024-05-17 15:29:05] 2024-05-17 13:28:51,802 | INFO     | 
[2024-05-17 15:29:05] 2024-05-17 13:28:51,802 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-17 15:29:05] 2024-05-17 13:28:51,820 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,820 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,822 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 15:29:05] 2024-05-17 13:28:51,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,822 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 15:29:05] 2024-05-17 13:28:51,822 | INFO     | job 6205824284 has completed (purged errors)
[2024-05-17 15:29:05] 2024-05-17 13:28:51,822 | INFO     | overall cleanup function is called
[2024-05-17 15:29:05] 2024-05-17 13:28:52,828 | INFO     | --- collectZombieJob: --- 10, [391498]
[2024-05-17 15:29:05] 2024-05-17 13:28:52,829 | INFO     | zombie collector waiting for pid 391498
[2024-05-17 15:29:05] 2024-05-17 13:28:52,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 15:29:05] 2024-05-17 13:28:53,834 | INFO     | collected zombie processes
[2024-05-17 15:29:05] 2024-05-17 13:28:53,834 | INFO     | will now attempt to kill all subprocesses of pid=391498
[2024-05-17 15:29:05] 2024-05-17 13:28:53,985 | INFO     | process IDs to be killed: [391498] (in reverse order)
[2024-05-17 15:29:05] 2024-05-17 13:28:54,090 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 15:29:05] 2024-05-17 13:28:54,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 15:29:05] 2024-05-17 13:28:54,098 | INFO     | did not find any defunct processes belonging to 391498
[2024-05-17 15:29:05] 2024-05-17 13:28:54,104 | INFO     | did not find any defunct processes belonging to 391498
[2024-05-17 15:29:05] 2024-05-17 13:28:54,105 | INFO     | ready for new job
[2024-05-17 15:29:05] 2024-05-17 13:28:54,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 15:29:05] 2024-05-17 13:28:54,106 | INFO     | *************************************
[2024-05-17 15:29:05] 2024-05-17 13:28:54,106 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 15:29:05] 2024-05-17 13:28:54,106 | INFO     | *************************************
[2024-05-17 15:29:05] 2024-05-17 13:28:54,106 | INFO     | 
[2024-05-17 15:29:05] 2024-05-17 13:28:54,109 | INFO     | architecture information:
[2024-05-17 15:29:05] 2024-05-17 13:28:54,109 | INFO     | executing command: cat /etc/os-release
[2024-05-17 15:29:05] 2024-05-17 13:28:54,124 | INFO     | cat /etc/os-release:
[2024-05-17 15:29:05] NAME="CentOS Linux"
[2024-05-17 15:29:05] VERSION="7 (Core)"
[2024-05-17 15:29:05] ID="centos"
[2024-05-17 15:29:05] ID_LIKE="rhel fedora"
[2024-05-17 15:29:05] VERSION_ID="7"
[2024-05-17 15:29:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 15:29:05] ANSI_COLOR="0;31"
[2024-05-17 15:29:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 15:29:05] HOME_URL="https://www.centos.org/"
[2024-05-17 15:29:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 15:29:05] 
[2024-05-17 15:29:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 15:29:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 15:29:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 15:29:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 15:29:05] 
[2024-05-17 15:29:05] 2024-05-17 13:28:54,124 | INFO     | *************************************
[2024-05-17 15:29:05] 2024-05-17 13:28:54,627 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-17 15:29:05] 2024-05-17 13:28:54,649 | INFO     | sufficient remaining disk space (575126110208 B)
[2024-05-17 15:29:05] 2024-05-17 13:28:54,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 15:29:05] 2024-05-17 13:28:54,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 15:29:05] 2024-05-17 13:28:54,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 15:29:05] 2024-05-17 13:28:54,650 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 15:29:05] 2024-05-17 13:28:54,651 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 15:29:05] 2024-05-17 13:28:54,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 15:29:05] 2024-05-17 13:28:54,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 15:29:05] 2024-05-17 13:28:54,672 | INFO     | all data control threads have been joined
[2024-05-17 15:29:05] 2024-05-17 13:28:54,698 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 15:29:05] 2024-05-17 13:28:55,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 15:29:05] 2024-05-17 13:28:55,124 | INFO     | aborting loop
[2024-05-17 15:29:05] 2024-05-17 13:28:55,526 | INFO     | all job control threads have been joined
[2024-05-17 15:29:05] 2024-05-17 13:28:55,626 | INFO     | all payload control threads have been joined
[2024-05-17 15:29:05] 2024-05-17 13:28:55,655 | INFO     | [job] retrieve thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:55,677 | INFO     | [data] control thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:55,803 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:55,940 | INFO     | [data] copytool_in thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:56,129 | INFO     | [job] job monitor thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:56,292 | INFO     | [payload] validate_post thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:56,531 | INFO     | [job] control thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:56,632 | INFO     | [payload] control thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:56,703 | INFO     | [data] copytool_out thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:56,771 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:56,810 | INFO     | [job] validate thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:56,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 15:29:05] 2024-05-17 13:28:56,841 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:56,998 | INFO     | [payload] failed_post thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:57,130 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:57,816 | INFO     | [job] queue monitor thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:58,656 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 15:29:05] 2024-05-17 13:28:58,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47601435694144)>', '<ExcThread(monitor, started 47601676220160)>']
[2024-05-17 15:29:05] 2024-05-17 13:28:59,676 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 15:29:05] 2024-05-17 13:28:59,676 | INFO     | [monitor] control thread has ended
[2024-05-17 15:29:05] 2024-05-17 13:29:03,952 | INFO     | all workflow threads have been joined
[2024-05-17 15:29:05] 2024-05-17 13:29:03,952 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 15:29:05] 2024-05-17 13:29:03,952 | INFO     | traces error code: 0
[2024-05-17 15:29:05] 2024-05-17 13:29:03,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 15:29:05] 2024-05-17 13:29:04,031 [wrapper] ==== pilot stdout END ====
[2024-05-17 15:29:05] 2024-05-17 13:29:04,034 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 15:29:05] 2024-05-17 13:29:04,036 [wrapper] pilotpid: 384449
[2024-05-17 15:29:05] 2024-05-17 13:29:04,038 [wrapper] Pilot exit status: 0
[2024-05-17 15:29:05] 2024-05-17 13:29:04,046 [wrapper] pandaids: 6205824284
[2024-05-17 15:29:05] 2024-05-17 13:29:04,109 [wrapper] cleanup: SIGTERM to supervisor_pilot  906134 384450
[2024-05-17 15:29:05] 2024-05-17 13:29:04,111 [wrapper] Test setup, not cleaning
[2024-05-17 15:29:05] 2024-05-17 13:29:04,113 [wrapper] ==== wrapper stdout END ====
[2024-05-17 15:29:05] 2024-05-17 13:29:04,115 [wrapper] ==== wrapper stderr END ====
[2024-05-17 15:29:05] 2024-05-17 13:29:04,119 [wrapper] apfmon messages muted
[2024-05-17 15:29:05]  *** Error codes and diagnostics ***
[2024-05-17 15:29:05]     "exeErrorCode": 0,
[2024-05-17 15:29:05]     "exeErrorDiag": "",
[2024-05-17 15:29:05]     "pilotErrorCode": 0,
[2024-05-17 15:29:05]     "pilotErrorDiag": "",
[2024-05-17 15:29:05]  *** Listing of results directory ***
[2024-05-17 15:29:05] total 875284
[2024-05-17 15:29:05] -rwx------ 1 boinc boinc     32251 May 13 10:32 runpilot2-wrapper.sh
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc      5633 May 13 10:33 queuedata.json
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc    467845 May 13 10:33 pilot3.tar.gz
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc       100 May 17 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 15:29:05] -rwxr-xr-x 1 boinc boinc      7986 May 17 10:56 run_atlas
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc       105 May 17 10:56 job.xml
[2024-05-17 15:29:05] -rw-r--r-- 2 boinc boinc 612362909 May 17 11:42 EVNT.38776140._000123.pool.root.1
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc      6662 May 17 11:42 init_data.xml
[2024-05-17 15:29:05] -rw-r--r-- 2 boinc boinc     17537 May 17 11:42 start_atlas.sh
[2024-05-17 15:29:05] drwxrwx--x 2 boinc boinc      4096 May 17 11:42 shared
[2024-05-17 15:29:05] -rw-r--r-- 2 boinc boinc    479996 May 17 11:42 input.tar.gz
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc         0 May 17 11:42 boinc_lockfile
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc      2614 May 17 11:42 pandaJob.out
[2024-05-17 15:29:05] -rw------- 1 boinc boinc       424 May 17 11:42 setup.sh.local
[2024-05-17 15:29:05] -rw------- 1 boinc boinc   1019400 May 17 11:42 agis_schedconf.cvmfs.json
[2024-05-17 15:29:05] -rw------- 1 boinc boinc   1324701 May 17 11:42 cric_ddmendpoints.json
[2024-05-17 15:29:05] drwx------ 4 boinc boinc      4096 May 17 11:43 pilot3
[2024-05-17 15:29:05] -rw------- 1 boinc boinc 276844860 May 17 15:28 HITS.38776146._003065.pool.root.1
[2024-05-17 15:29:05] -rw------- 1 boinc boinc        95 May 17 15:28 pilot_heartbeat.json
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc       531 May 17 15:28 boinc_task_state.xml
[2024-05-17 15:29:05] -rw------- 1 boinc boinc      1052 May 17 15:28 memory_monitor_summary.json
[2024-05-17 15:29:05] -rw------- 1 boinc boinc         0 May 17 15:28 agis_ddmendpoints.agis.ALL.json
[2024-05-17 15:29:05] -rw------- 1 boinc boinc    334187 May 17 15:28 log.38776146._003065.job.log.tgz.1
[2024-05-17 15:29:05] -rw------- 1 boinc boinc      7768 May 17 15:28 heartbeat.json
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc        28 May 17 15:28 wrapper_checkpoint.txt
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc      8192 May 17 15:28 boinc_mmap_file
[2024-05-17 15:29:05] -rw------- 1 boinc boinc      4344 May 17 15:29 pilotlog.txt
[2024-05-17 15:29:05] -rw------- 1 boinc boinc   1439570 May 17 15:29 log.38776146._003065.job.log.1
[2024-05-17 15:29:05] -rw------- 1 boinc boinc       357 May 17 15:29 output.list
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc       620 May 17 15:29 runtime_log
[2024-05-17 15:29:05] -rw------- 1 boinc boinc   1792000 May 17 15:29 result.tar.gz
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc     11410 May 17 15:29 runtime_log.err
[2024-05-17 15:29:05] -rw------- 1 boinc boinc       658 May 17 15:29 kzuLDmQHgQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDm47WKDmJ1eHGn.diag
[2024-05-17 15:29:05] -rw-r--r-- 1 boinc boinc     21333 May 17 15:29 stderr.txt
[2024-05-17 15:29:05] HITS file was successfully produced:
[2024-05-17 15:29:05] -rw------- 1 boinc boinc 276844860 May 17 15:28 shared/HITS.pool.root.1
[2024-05-17 15:29:05]  *** Contents of shared directory: ***
[2024-05-17 15:29:05] total 870624
[2024-05-17 15:29:05] -rw-r--r-- 2 boinc boinc 612362909 May 17 11:42 ATLAS.root_0
[2024-05-17 15:29:05] -rw-r--r-- 2 boinc boinc     17537 May 17 11:42 start_atlas.sh
[2024-05-17 15:29:05] -rw-r--r-- 2 boinc boinc    479996 May 17 11:42 input.tar.gz
[2024-05-17 15:29:05] -rw------- 1 boinc boinc 276844860 May 17 15:28 HITS.pool.root.1
[2024-05-17 15:29:05] -rw------- 1 boinc boinc   1792000 May 17 15:29 result.tar.gz
15:29:06 (380107): run_atlas exited; CPU time 51022.839418
15:29:06 (380107): called boinc_finish(0)

</stderr_txt>
]]>

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