Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:20:45 (3314717): wrapper (7.7.26015): starting
14:20:45 (3314717): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 14:20:45] Arguments: --nthreads 4
[2024-05-16 14:20:45] Threads: 4
[2024-05-16 14:20:45] Checking for CVMFS
[2024-05-16 14:20:45] No cvmfs_config command found, will try listing directly
[2024-05-16 14:20:45] CVMFS is ok
[2024-05-16 14:20:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 14:20:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 14:20:45] Further information can be found at the LHC@home message board.
[2024-05-16 14:20:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 14:20:45] Checking for apptainer binary...
[2024-05-16 14:20:45] which: no apptainer in ((null))
[2024-05-16 14:20:45] apptainer is not installed, using version from CVMFS
[2024-05-16 14:20:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 14:20:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-16 14:20:46] apptainer works
[2024-05-16 14:20:46] Set ATHENA_PROC_NUMBER=4
[2024-05-16 14:20:46] Set ATHENA_CORE_NUMBER=4
[2024-05-16 14:20:46] Starting ATLAS job with PandaID=6205810412
[2024-05-16 14:20:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 17:20:02]  *** The last 200 lines of the pilot log: ***
[2024-05-16 17:20:02] 2024-05-16 15:19:47,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 17:20:02] 2024-05-16 15:19:47,271 | INFO     | fitting pss+swap vs Time
[2024-05-16 17:20:02] 2024-05-16 15:19:47,271 | INFO     | model: linear, x: [1715862091.0, 1715862152.0, 1715862213.0, 1715862274.0, 1715862335.0, 1715862396.0, 1715862457.0, 1715862518.0, 1715862579.0, 1715862640.0, 1715
[2024-05-16 17:20:02] 2024-05-16 15:19:47,271 | INFO     | sum of square deviations: 1690450300.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,272 | INFO     | sum of deviations: 24079781902.99999
[2024-05-16 17:20:02] 2024-05-16 15:19:47,272 | INFO     | mean x: 1715867428.5
[2024-05-16 17:20:02] 2024-05-16 15:19:47,272 | INFO     | mean y: 2304895.772727273
[2024-05-16 17:20:02] 2024-05-16 15:19:47,272 | INFO     | -- intersect: -24439533739.022644
[2024-05-16 17:20:02] 2024-05-16 15:19:47,273 | INFO     | intersect: -24439533739.022644
[2024-05-16 17:20:02] 2024-05-16 15:19:47,273 | INFO     | chi2: 4.5358746909509
[2024-05-16 17:20:02] 2024-05-16 15:19:47,273 | INFO     | model: linear, x: [1715862091.0, 1715862152.0, 1715862213.0, 1715862274.0, 1715862335.0, 1715862396.0, 1715862457.0, 1715862518.0, 1715862579.0, 1715862640.0, 1715
[2024-05-16 17:20:02] 2024-05-16 15:19:47,273 | INFO     | sum of square deviations: 1550429070.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,274 | INFO     | sum of deviations: 34790528512.999985
[2024-05-16 17:20:02] 2024-05-16 15:19:47,274 | INFO     | mean x: 1715867276.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,274 | INFO     | mean y: 2316279.3625730993
[2024-05-16 17:20:02] 2024-05-16 15:19:47,274 | INFO     | -- intersect: -38500528220.45167
[2024-05-16 17:20:02] 2024-05-16 15:19:47,274 | INFO     | intersect: -38500528220.45167
[2024-05-16 17:20:02] 2024-05-16 15:19:47,275 | INFO     | chi2: 3.7467349375274503
[2024-05-16 17:20:02] 2024-05-16 15:19:47,275 | INFO     | current chi2=3.7467349375274503 (change=17.397741498410184 %)
[2024-05-16 17:20:02] 2024-05-16 15:19:47,275 | INFO     | right removable region: 170
[2024-05-16 17:20:02] 2024-05-16 15:19:47,275 | INFO     | model: linear, x: [1715862396.0, 1715862457.0, 1715862518.0, 1715862579.0, 1715862640.0, 1715862701.0, 1715862762.0, 1715862823.0, 1715862884.0, 1715862945.0, 1715
[2024-05-16 17:20:02] 2024-05-16 15:19:47,275 | INFO     | sum of square deviations: 1550429070.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,276 | INFO     | sum of deviations: -13595442160.999996
[2024-05-16 17:20:02] 2024-05-16 15:19:47,276 | INFO     | mean x: 1715867581.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,276 | INFO     | mean y: 2345759.7076023393
[2024-05-16 17:20:02] 2024-05-16 15:19:47,276 | INFO     | -- intersect: 15048489375.56516
[2024-05-16 17:20:02] 2024-05-16 15:19:47,276 | INFO     | intersect: 15048489375.56516
[2024-05-16 17:20:02] 2024-05-16 15:19:47,277 | INFO     | chi2: 2.2243501809473494
[2024-05-16 17:20:02] 2024-05-16 15:19:47,277 | INFO     | current chi2=2.2243501809473494 (change=50.96094287205635 %)
[2024-05-16 17:20:02] 2024-05-16 15:19:47,277 | INFO     | model: linear, x: [1715862701.0, 1715862762.0, 1715862823.0, 1715862884.0, 1715862945.0, 1715863006.0, 1715863067.0, 1715863128.0, 1715863189.0, 1715863250.0, 1715
[2024-05-16 17:20:02] 2024-05-16 15:19:47,277 | INFO     | sum of square deviations: 1418361477.5
[2024-05-16 17:20:02] 2024-05-16 15:19:47,278 | INFO     | sum of deviations: -41856674573.00001
[2024-05-16 17:20:02] 2024-05-16 15:19:47,278 | INFO     | mean x: 1715867733.5
[2024-05-16 17:20:02] 2024-05-16 15:19:47,278 | INFO     | mean y: 2378397.493975904
[2024-05-16 17:20:02] 2024-05-16 15:19:47,278 | INFO     | -- intersect: 50638636129.20511
[2024-05-16 17:20:02] 2024-05-16 15:19:47,278 | INFO     | intersect: 50638636129.20511
[2024-05-16 17:20:02] 2024-05-16 15:19:47,279 | INFO     | chi2: 1.0085371589253898
[2024-05-16 17:20:02] 2024-05-16 15:19:47,279 | INFO     | current chi2=1.0085371589253898 (change=54.65924531290058 %)
[2024-05-16 17:20:02] 2024-05-16 15:19:47,279 | INFO     | model: linear, x: [1715863006.0, 1715863067.0, 1715863128.0, 1715863189.0, 1715863250.0, 1715863311.0, 1715863372.0, 1715863433.0, 1715863494.0, 1715863555.0, 1715
[2024-05-16 17:20:02] 2024-05-16 15:19:47,279 | INFO     | sum of square deviations: 1294014960.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,280 | INFO     | sum of deviations: -40654245440.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,280 | INFO     | mean x: 1715867886.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,280 | INFO     | mean y: 2376829.347826087
[2024-05-16 17:20:02] 2024-05-16 15:19:47,280 | INFO     | -- intersect: 53910033492.03273
[2024-05-16 17:20:02] 2024-05-16 15:19:47,280 | INFO     | intersect: 53910033492.03273
[2024-05-16 17:20:02] 2024-05-16 15:19:47,280 | INFO     | chi2: 0.9721025722593817
[2024-05-16 17:20:02] 2024-05-16 15:19:47,280 | INFO     | current chi2=0.9721025722593817 (change=3.612617179601952 %)
[2024-05-16 17:20:02] 2024-05-16 15:19:47,281 | INFO     | left removable region: 30
[2024-05-16 17:20:02] 2024-05-16 15:19:47,281 | INFO     | model: linear, x: [1715863921.0, 1715863982.0, 1715864043.0, 1715864104.0, 1715864165.0, 1715864226.0, 1715864287.0, 1715864348.0, 1715864409.0, 1715864470.0, 1715
[2024-05-16 17:20:02] 2024-05-16 15:19:47,281 | INFO     | sum of square deviations: 850825255.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,282 | INFO     | sum of deviations: -13531898766.0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,282 | INFO     | mean x: 1715868160.5
[2024-05-16 17:20:02] 2024-05-16 15:19:47,282 | INFO     | mean y: 2368732.9857142856
[2024-05-16 17:20:02] 2024-05-16 15:19:47,282 | INFO     | -- intersect: 27292290026.740257
[2024-05-16 17:20:02] 2024-05-16 15:19:47,282 | INFO     | intersect: 27292290026.740257
[2024-05-16 17:20:02] 2024-05-16 15:19:47,282 | INFO     | chi2: 0.07330326848329449
[2024-05-16 17:20:02] 2024-05-16 15:19:47,282 | INFO     | -- intersect: 27292290026.740257
[2024-05-16 17:20:02] 2024-05-16 15:19:47,282 | INFO     | current memory leak: -15.90 B/s (using 140 data points, chi2=0.07)
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | ..............................
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | . Timing measurements:
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | . get job = 0 s
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | . initial setup = 1 s
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | . payload setup = 8 s
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | . stage-in = 0 s
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | . payload execution = 10690 s
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | . stage-out = 0 s
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | . log creation = 0 s
[2024-05-16 17:20:02] 2024-05-16 15:19:47,283 | INFO     | ..............................
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | 
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | job summary report
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | --------------------------------------------------
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | PanDA job id: 6205810412
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | task id: 38776125
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | errors: (none)
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | pilot state: finished 
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | transexitcode: 0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,354 | INFO     | exeerrorcode: 0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | exeerrordiag: 
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | exitcode: 0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | exitmsg: OK
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | cpuconsumptiontime: 40043 s
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | nevents: 400
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | neventsw: 0
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | pid: 3327034
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | pgrp: 3327034
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | corecount: 4
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | event service: False
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | sizes: {0: 2391304, 1: 2392239, 6: 2392445, 12: 2392473, 10701: 2421273, 10702: 2430255, 10703: 2430439, 10710: 2430609}
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | --------------------------------------------------
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | 
[2024-05-16 17:20:02] 2024-05-16 15:19:47,355 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/1
[2024-05-16 17:20:02] 2024-05-16 15:19:47,382 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,382 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,382 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,382 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,384 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 17:20:02] 2024-05-16 15:19:47,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,384 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 17:20:02] 2024-05-16 15:19:47,384 | INFO     | job 6205810412 has completed (purged errors)
[2024-05-16 17:20:02] 2024-05-16 15:19:47,384 | INFO     | overall cleanup function is called
[2024-05-16 17:20:02] 2024-05-16 15:19:48,392 | INFO     | --- collectZombieJob: --- 10, [3327034]
[2024-05-16 17:20:02] 2024-05-16 15:19:48,392 | INFO     | zombie collector waiting for pid 3327034
[2024-05-16 17:20:02] 2024-05-16 15:19:48,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 17:20:02] 2024-05-16 15:19:49,397 | INFO     | collected zombie processes
[2024-05-16 17:20:02] 2024-05-16 15:19:49,397 | INFO     | will now attempt to kill all subprocesses of pid=3327034
[2024-05-16 17:20:02] 2024-05-16 15:19:49,673 | INFO     | process IDs to be killed: [3327034] (in reverse order)
[2024-05-16 17:20:02] 2024-05-16 15:19:49,855 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 17:20:02] 2024-05-16 15:19:49,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 17:20:02] 2024-05-16 15:19:49,876 | INFO     | did not find any defunct processes belonging to 3327034
[2024-05-16 17:20:02] 2024-05-16 15:19:49,892 | INFO     | did not find any defunct processes belonging to 3327034
[2024-05-16 17:20:02] 2024-05-16 15:19:49,892 | INFO     | ready for new job
[2024-05-16 17:20:02] 2024-05-16 15:19:49,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 17:20:02] 2024-05-16 15:19:49,894 | INFO     | *************************************
[2024-05-16 17:20:02] 2024-05-16 15:19:49,894 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 17:20:02] 2024-05-16 15:19:49,894 | INFO     | *************************************
[2024-05-16 17:20:02] 2024-05-16 15:19:49,895 | INFO     | 
[2024-05-16 17:20:02] 2024-05-16 15:19:49,902 | INFO     | architecture information:
[2024-05-16 17:20:02] 2024-05-16 15:19:49,902 | INFO     | executing command: cat /etc/os-release
[2024-05-16 17:20:02] 2024-05-16 15:19:49,921 | INFO     | cat /etc/os-release:
[2024-05-16 17:20:02] NAME="CentOS Linux"
[2024-05-16 17:20:02] VERSION="7 (Core)"
[2024-05-16 17:20:02] ID="centos"
[2024-05-16 17:20:02] ID_LIKE="rhel fedora"
[2024-05-16 17:20:02] VERSION_ID="7"
[2024-05-16 17:20:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 17:20:02] ANSI_COLOR="0;31"
[2024-05-16 17:20:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 17:20:02] HOME_URL="https://www.centos.org/"
[2024-05-16 17:20:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 17:20:02] 
[2024-05-16 17:20:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 17:20:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 17:20:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 17:20:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 17:20:02] 
[2024-05-16 17:20:02] 2024-05-16 15:19:49,921 | INFO     | *************************************
[2024-05-16 17:20:02] 2024-05-16 15:19:50,422 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/1
[2024-05-16 17:20:02] 2024-05-16 15:19:50,444 | INFO     | sufficient remaining disk space (2963548405760 B)
[2024-05-16 17:20:02] 2024-05-16 15:19:50,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 17:20:02] 2024-05-16 15:19:50,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 17:20:02] 2024-05-16 15:19:50,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 17:20:02] 2024-05-16 15:19:50,602 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 17:20:02] 2024-05-16 15:19:50,603 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 17:20:02] 2024-05-16 15:19:50,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:20:02] 2024-05-16 15:19:50,603 | INFO     | will abort loop
[2024-05-16 17:20:02] 2024-05-16 15:19:50,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 17:20:02] 2024-05-16 15:19:50,629 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 17:20:02] 2024-05-16 15:19:50,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 17:20:02] 2024-05-16 15:19:50,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 17:20:02] 2024-05-16 15:19:51,074 | INFO     | all data control threads have been joined
[2024-05-16 17:20:02] 2024-05-16 15:19:51,450 | INFO     | [job] retrieve thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:51,484 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:51,544 | INFO     | all payload control threads have been joined
[2024-05-16 17:20:02] 2024-05-16 15:19:51,596 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:51,608 | INFO     | [job] job monitor thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:51,702 | INFO     | [payload] failed_post thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:51,845 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:51,947 | INFO     | all job control threads have been joined
[2024-05-16 17:20:02] 2024-05-16 15:19:52,039 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:52,079 | INFO     | [data] control thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:52,362 | INFO     | [payload] validate_post thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:52,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:20:02] 2024-05-16 15:19:52,451 | INFO     | [data] copytool_out thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:52,549 | INFO     | [payload] control thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:52,598 | INFO     | [data] copytool_in thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:52,899 | INFO     | [job] validate thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:52,952 | INFO     | [job] control thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:53,369 | INFO     | [job] queue monitor thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:54,635 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 17:20:02] 2024-05-16 15:19:56,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47666664449088)>', '<ExcThread(monitor, started 47666906035968)>']
[2024-05-16 17:20:02] 2024-05-16 15:19:56,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 17:20:02] 2024-05-16 15:19:56,660 | INFO     | [monitor] control thread has ended
[2024-05-16 17:20:02] 2024-05-16 15:20:01,213 | INFO     | all workflow threads have been joined
[2024-05-16 17:20:02] 2024-05-16 15:20:01,213 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 17:20:02] 2024-05-16 15:20:01,213 | INFO     | traces error code: 0
[2024-05-16 17:20:02] 2024-05-16 15:20:01,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 17:20:02] 2024-05-16 15:20:01,299 [wrapper] ==== pilot stdout END ====
[2024-05-16 17:20:02] 2024-05-16 15:20:01,301 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 17:20:02] 2024-05-16 15:20:01,304 [wrapper] pilotpid: 3319411
[2024-05-16 17:20:02] 2024-05-16 15:20:01,306 [wrapper] Pilot exit status: 0
[2024-05-16 17:20:02] 2024-05-16 15:20:01,327 [wrapper] pandaids: 6205810412
[2024-05-16 17:20:02] 2024-05-16 15:20:01,485 [wrapper] cleanup: SIGTERM to supervisor_pilot 4146067 3319412
[2024-05-16 17:20:02] 2024-05-16 15:20:01,501 [wrapper] Test setup, not cleaning
[2024-05-16 17:20:02] 2024-05-16 15:20:01,504 [wrapper] ==== wrapper stdout END ====
[2024-05-16 17:20:02] 2024-05-16 15:20:01,507 [wrapper] ==== wrapper stderr END ====
[2024-05-16 17:20:02] 2024-05-16 15:20:01,513 [wrapper] apfmon messages muted
[2024-05-16 17:20:02]  *** Error codes and diagnostics ***
[2024-05-16 17:20:02]     "exeErrorCode": 0,
[2024-05-16 17:20:02]     "exeErrorDiag": "",
[2024-05-16 17:20:02]     "pilotErrorCode": 0,
[2024-05-16 17:20:02]     "pilotErrorDiag": "",
[2024-05-16 17:20:02]  *** Listing of results directory ***
[2024-05-16 17:20:02] total 829332
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc    467845 May 13 10:18 pilot3.tar.gz
[2024-05-16 17:20:02] -rwx------ 1 boinc boinc     32251 May 13 10:33 runpilot2-wrapper.sh
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc      5633 May 13 10:33 queuedata.json
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc       100 May 16 14:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 17:20:02] -rwxr-xr-x 1 boinc boinc      7986 May 16 14:20 run_atlas
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc       105 May 16 14:20 job.xml
[2024-05-16 17:20:02] -rw-r--r-- 2 boinc boinc 600252949 May 16 14:20 EVNT.38776119._000071.pool.root.1
[2024-05-16 17:20:02] -rw-r--r-- 2 boinc boinc     17537 May 16 14:20 start_atlas.sh
[2024-05-16 17:20:02] drwxrwx--x 2 boinc boinc      4096 May 16 14:20 shared
[2024-05-16 17:20:02] -rw-r--r-- 2 boinc boinc    479999 May 16 14:20 input.tar.gz
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc      6643 May 16 14:20 init_data.xml
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc         0 May 16 14:20 boinc_lockfile
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc      2640 May 16 14:20 pandaJob.out
[2024-05-16 17:20:02] -rw------- 1 boinc boinc       424 May 16 14:20 setup.sh.local
[2024-05-16 17:20:02] -rw------- 1 boinc boinc   1010335 May 16 14:20 agis_schedconf.cvmfs.json
[2024-05-16 17:20:02] -rw------- 1 boinc boinc         0 May 16 14:20 agis_ddmendpoints.agis.ALL.json
[2024-05-16 17:20:02] -rw------- 1 boinc boinc   1324701 May 16 14:20 cric_ddmendpoints.json
[2024-05-16 17:20:02] drwx------ 4 boinc boinc      4096 May 16 14:20 pilot3
[2024-05-16 17:20:02] -rw------- 1 boinc boinc 242666612 May 16 17:19 HITS.38776125._002730.pool.root.1
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc       532 May 16 17:19 boinc_task_state.xml
[2024-05-16 17:20:02] -rw------- 1 boinc boinc        95 May 16 17:19 pilot_heartbeat.json
[2024-05-16 17:20:02] -rw------- 1 boinc boinc      1042 May 16 17:19 memory_monitor_summary.json
[2024-05-16 17:20:02] -rw------- 1 boinc boinc    306689 May 16 17:19 log.38776125._002730.job.log.tgz.1
[2024-05-16 17:20:02] -rw------- 1 boinc boinc      7722 May 16 17:19 heartbeat.json
[2024-05-16 17:20:02] -rw------- 1 boinc boinc      4408 May 16 17:20 pilotlog.txt
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc        28 May 16 17:20 wrapper_checkpoint.txt
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc      8192 May 16 17:20 boinc_mmap_file
[2024-05-16 17:20:02] -rw------- 1 boinc boinc   1090193 May 16 17:20 log.38776125._002730.job.log.1
[2024-05-16 17:20:02] -rw------- 1 boinc boinc       357 May 16 17:20 output.list
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc       620 May 16 17:20 runtime_log
[2024-05-16 17:20:02] -rw------- 1 boinc boinc   1413120 May 16 17:20 result.tar.gz
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc     11410 May 16 17:20 runtime_log.err
[2024-05-16 17:20:02] -rw------- 1 boinc boinc       659 May 16 17:20 BeUKDmRIgQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDm5zJKDmpI3WWo.diag
[2024-05-16 17:20:02] -rw-r--r-- 1 boinc boinc     21328 May 16 17:20 stderr.txt
[2024-05-16 17:20:02] HITS file was successfully produced:
[2024-05-16 17:20:02] -rw------- 1 boinc boinc 242666612 May 16 17:19 shared/HITS.pool.root.1
[2024-05-16 17:20:02]  *** Contents of shared directory: ***
[2024-05-16 17:20:02] total 825048
[2024-05-16 17:20:02] -rw-r--r-- 2 boinc boinc 600252949 May 16 14:20 ATLAS.root_0
[2024-05-16 17:20:02] -rw-r--r-- 2 boinc boinc     17537 May 16 14:20 start_atlas.sh
[2024-05-16 17:20:02] -rw-r--r-- 2 boinc boinc    479999 May 16 14:20 input.tar.gz
[2024-05-16 17:20:02] -rw------- 1 boinc boinc 242666612 May 16 17:19 HITS.pool.root.1
[2024-05-16 17:20:02] -rw------- 1 boinc boinc   1413120 May 16 17:20 result.tar.gz
17:20:03 (3314717): run_atlas exited; CPU time 39789.805355
17:20:03 (3314717): called boinc_finish(0)

</stderr_txt>
]]>

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