Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:57:15 (3405358): wrapper (7.7.26015): starting
07:57:15 (3405358): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 07:57:15] Arguments: --nthreads 4
[2024-05-15 07:57:15] Threads: 4
[2024-05-15 07:57:15] Checking for CVMFS
[2024-05-15 07:57:15] No cvmfs_config command found, will try listing directly
[2024-05-15 07:57:15] CVMFS is ok
[2024-05-15 07:57:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 07:57:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 07:57:15] Further information can be found at the LHC@home message board.
[2024-05-15 07:57:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 07:57:15] Checking for apptainer binary...
[2024-05-15 07:57:15] which: no apptainer in ((null))
[2024-05-15 07:57:15] apptainer is not installed, using version from CVMFS
[2024-05-15 07:57:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 07:57:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-15 07:57:16] apptainer works
[2024-05-15 07:57:16] Set ATHENA_PROC_NUMBER=4
[2024-05-15 07:57:16] Set ATHENA_CORE_NUMBER=4
[2024-05-15 07:57:16] Starting ATLAS job with PandaID=6205824362
[2024-05-15 07:57:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 11:39:46]  *** The last 200 lines of the pilot log: ***
[2024-05-15 11:39:46] 2024-05-15 09:39:26,017 | INFO     | intersect: -33652388537.55289
[2024-05-15 11:39:46] 2024-05-15 09:39:26,017 | INFO     | chi2: 1.6723743035276526
[2024-05-15 11:39:46] 2024-05-15 09:39:26,017 | INFO     | current chi2=1.6723743035276526 (change=60.231141775704565 %)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,018 | INFO     | model: linear, x: [1715753286.0, 1715753347.0, 1715753408.0, 1715753469.0, 1715753530.0, 1715753591.0, 1715753652.0, 1715753713.0, 1715753774.0, 1715753835.0, 1715
[2024-05-15 11:39:46] 2024-05-15 09:39:26,018 | INFO     | sum of square deviations: 2790348132.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,018 | INFO     | sum of deviations: 16241692860.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,019 | INFO     | mean x: 1715759599.5
[2024-05-15 11:39:46] 2024-05-15 09:39:26,019 | INFO     | mean y: 2345416.673076923
[2024-05-15 11:39:46] 2024-05-15 09:39:26,019 | INFO     | -- intersect: -9984523288.738914
[2024-05-15 11:39:46] 2024-05-15 09:39:26,019 | INFO     | intersect: -9984523288.738914
[2024-05-15 11:39:46] 2024-05-15 09:39:26,019 | INFO     | chi2: 0.06617483533076603
[2024-05-15 11:39:46] 2024-05-15 09:39:26,019 | INFO     | current chi2=0.06617483533076603 (change=96.04306074356805 %)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,019 | INFO     | model: linear, x: [1715753591.0, 1715753652.0, 1715753713.0, 1715753774.0, 1715753835.0, 1715753896.0, 1715753957.0, 1715754018.0, 1715754079.0, 1715754140.0, 1715
[2024-05-15 11:39:46] 2024-05-15 09:39:26,019 | INFO     | sum of square deviations: 2593916542.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,020 | INFO     | sum of deviations: 9304838434.999998
[2024-05-15 11:39:46] 2024-05-15 09:39:26,020 | INFO     | mean x: 1715759752.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,020 | INFO     | mean y: 2350749.84729064
[2024-05-15 11:39:46] 2024-05-15 09:39:26,020 | INFO     | -- intersect: -6152383616.943938
[2024-05-15 11:39:46] 2024-05-15 09:39:26,020 | INFO     | intersect: -6152383616.943938
[2024-05-15 11:39:46] 2024-05-15 09:39:26,020 | INFO     | chi2: 0.0025642773395395026
[2024-05-15 11:39:46] 2024-05-15 09:39:26,021 | INFO     | current chi2=0.0025642773395395026 (change=96.12499626674959 %)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,021 | INFO     | model: linear, x: [1715753896.0, 1715753957.0, 1715754018.0, 1715754079.0, 1715754140.0, 1715754201.0, 1715754262.0, 1715754323.0, 1715754384.0, 1715754445.0, 1715
[2024-05-15 11:39:46] 2024-05-15 09:39:26,021 | INFO     | sum of square deviations: 2406926989.5
[2024-05-15 11:39:46] 2024-05-15 09:39:26,021 | INFO     | sum of deviations: 7511624180.000001
[2024-05-15 11:39:46] 2024-05-15 09:39:26,022 | INFO     | mean x: 1715759904.5
[2024-05-15 11:39:46] 2024-05-15 09:39:26,022 | INFO     | mean y: 2352211.101010101
[2024-05-15 11:39:46] 2024-05-15 09:39:26,022 | INFO     | -- intersect: -5352252910.674617
[2024-05-15 11:39:46] 2024-05-15 09:39:26,022 | INFO     | intersect: -5352252910.674617
[2024-05-15 11:39:46] 2024-05-15 09:39:26,022 | INFO     | chi2: 0.0011509440005698028
[2024-05-15 11:39:46] 2024-05-15 09:39:26,022 | INFO     | current chi2=0.0011509440005698028 (change=55.11624336326697 %)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,022 | INFO     | model: linear, x: [1715754201.0, 1715754262.0, 1715754323.0, 1715754384.0, 1715754445.0, 1715754506.0, 1715754567.0, 1715754628.0, 1715754689.0, 1715754750.0, 1715
[2024-05-15 11:39:46] 2024-05-15 09:39:26,022 | INFO     | sum of square deviations: 2229146912.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,023 | INFO     | sum of deviations: 6312276096.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,023 | INFO     | mean x: 1715760057.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,023 | INFO     | mean y: 2353237.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,023 | INFO     | -- intersect: -4856165120.83926
[2024-05-15 11:39:46] 2024-05-15 09:39:26,023 | INFO     | intersect: -4856165120.83926
[2024-05-15 11:39:46] 2024-05-15 09:39:26,023 | INFO     | chi2: 0.0006262145474802082
[2024-05-15 11:39:46] 2024-05-15 09:39:26,023 | INFO     | current chi2=0.0006262145474802082 (change=45.59122362424362 %)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,023 | INFO     | model: linear, x: [1715754506.0, 1715754567.0, 1715754628.0, 1715754689.0, 1715754750.0, 1715754811.0, 1715754872.0, 1715754933.0, 1715754994.0, 1715755055.0, 1715
[2024-05-15 11:39:46] 2024-05-15 09:39:26,023 | INFO     | sum of square deviations: 2060343747.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,024 | INFO     | sum of deviations: 5507735811.000001
[2024-05-15 11:39:46] 2024-05-15 09:39:26,024 | INFO     | mean x: 1715760209.5
[2024-05-15 11:39:46] 2024-05-15 09:39:26,024 | INFO     | mean y: 2353963.3085106383
[2024-05-15 11:39:46] 2024-05-15 09:39:26,024 | INFO     | -- intersect: -4584236969.73933
[2024-05-15 11:39:46] 2024-05-15 09:39:26,024 | INFO     | intersect: -4584236969.73933
[2024-05-15 11:39:46] 2024-05-15 09:39:26,024 | INFO     | chi2: 0.0004985415376452883
[2024-05-15 11:39:46] 2024-05-15 09:39:26,025 | INFO     | current chi2=0.0004985415376452883 (change=20.388061942772907 %)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,025 | INFO     | left removable region: 60
[2024-05-15 11:39:46] 2024-05-15 09:39:26,025 | INFO     | model: linear, x: [1715756336.0, 1715756397.0, 1715756458.0, 1715756519.0, 1715756580.0, 1715756641.0, 1715756702.0, 1715756763.0, 1715756824.0, 1715756885.0, 1715
[2024-05-15 11:39:46] 2024-05-15 09:39:26,025 | INFO     | sum of square deviations: 1088905998.0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,025 | INFO     | sum of deviations: 2453941794.000001
[2024-05-15 11:39:46] 2024-05-15 09:39:26,025 | INFO     | mean x: 1715760941.5
[2024-05-15 11:39:46] 2024-05-15 09:39:26,025 | INFO     | mean y: 2356858.4078947366
[2024-05-15 11:39:46] 2024-05-15 09:39:26,025 | INFO     | -- intersect: -3864255586.185914
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | intersect: -3864255586.185914
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | chi2: 0.00027121829884423754
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | -- intersect: -3864255586.185914
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | current memory leak: 2.25 B/s (using 152 data points, chi2=0.00)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | ..............................
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | . Timing measurements:
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | . get job = 0 s
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | . initial setup = 1 s
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | . payload setup = 6 s
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | . stage-in = 0 s
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | . payload execution = 13286 s
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | . stage-out = 1 s
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | . log creation = 0 s
[2024-05-15 11:39:46] 2024-05-15 09:39:26,026 | INFO     | ..............................
[2024-05-15 11:39:46] 2024-05-15 09:39:26,268 | INFO     | 
[2024-05-15 11:39:46] 2024-05-15 09:39:26,268 | INFO     | job summary report
[2024-05-15 11:39:46] 2024-05-15 09:39:26,268 | INFO     | --------------------------------------------------
[2024-05-15 11:39:46] 2024-05-15 09:39:26,268 | INFO     | PanDA job id: 6205824362
[2024-05-15 11:39:46] 2024-05-15 09:39:26,268 | INFO     | task id: 38776146
[2024-05-15 11:39:46] 2024-05-15 09:39:26,268 | INFO     | errors: (none)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,268 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 11:39:46] 2024-05-15 09:39:26,268 | INFO     | pilot state: finished 
[2024-05-15 11:39:46] 2024-05-15 09:39:26,268 | INFO     | transexitcode: 0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | exeerrorcode: 0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | exeerrordiag: 
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | exitcode: 0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | exitmsg: OK
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | cpuconsumptiontime: 50124 s
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | nevents: 400
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | neventsw: 0
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | pid: 3419847
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | pgrp: 3419847
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | corecount: 4
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | event service: False
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | sizes: {0: 2394319, 1: 2394518, 5: 2394724, 12: 2394780, 13297: 2424841, 13298: 2424840, 13299: 2434062, 13303: 2434176}
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | --------------------------------------------------
[2024-05-15 11:39:46] 2024-05-15 09:39:26,269 | INFO     | 
[2024-05-15 11:39:46] 2024-05-15 09:39:26,270 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-05-15 11:39:46] 2024-05-15 09:39:26,292 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,292 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,292 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,292 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | job 6205824362 has completed (purged errors)
[2024-05-15 11:39:46] 2024-05-15 09:39:26,293 | INFO     | overall cleanup function is called
[2024-05-15 11:39:46] 2024-05-15 09:39:27,300 | INFO     | --- collectZombieJob: --- 10, [3419847]
[2024-05-15 11:39:46] 2024-05-15 09:39:27,300 | INFO     | zombie collector waiting for pid 3419847
[2024-05-15 11:39:46] 2024-05-15 09:39:27,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 11:39:46] 2024-05-15 09:39:28,305 | INFO     | collected zombie processes
[2024-05-15 11:39:46] 2024-05-15 09:39:28,305 | INFO     | will now attempt to kill all subprocesses of pid=3419847
[2024-05-15 11:39:46] 2024-05-15 09:39:28,513 | INFO     | process IDs to be killed: [3419847] (in reverse order)
[2024-05-15 11:39:46] 2024-05-15 09:39:28,658 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 11:39:46] 2024-05-15 09:39:28,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 11:39:46] 2024-05-15 09:39:28,671 | INFO     | did not find any defunct processes belonging to 3419847
[2024-05-15 11:39:46] 2024-05-15 09:39:28,681 | INFO     | did not find any defunct processes belonging to 3419847
[2024-05-15 11:39:46] 2024-05-15 09:39:28,681 | INFO     | ready for new job
[2024-05-15 11:39:46] 2024-05-15 09:39:28,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 11:39:46] 2024-05-15 09:39:28,682 | INFO     | *************************************
[2024-05-15 11:39:46] 2024-05-15 09:39:28,682 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 11:39:46] 2024-05-15 09:39:28,682 | INFO     | *************************************
[2024-05-15 11:39:46] 2024-05-15 09:39:28,683 | INFO     | 
[2024-05-15 11:39:46] 2024-05-15 09:39:28,687 | INFO     | architecture information:
[2024-05-15 11:39:46] 2024-05-15 09:39:28,688 | INFO     | executing command: cat /etc/os-release
[2024-05-15 11:39:46] 2024-05-15 09:39:28,701 | INFO     | cat /etc/os-release:
[2024-05-15 11:39:46] NAME="CentOS Linux"
[2024-05-15 11:39:46] VERSION="7 (Core)"
[2024-05-15 11:39:46] ID="centos"
[2024-05-15 11:39:46] ID_LIKE="rhel fedora"
[2024-05-15 11:39:46] VERSION_ID="7"
[2024-05-15 11:39:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 11:39:46] ANSI_COLOR="0;31"
[2024-05-15 11:39:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 11:39:46] HOME_URL="https://www.centos.org/"
[2024-05-15 11:39:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 11:39:46] 
[2024-05-15 11:39:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 11:39:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 11:39:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 11:39:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 11:39:46] 
[2024-05-15 11:39:46] 2024-05-15 09:39:28,702 | INFO     | *************************************
[2024-05-15 11:39:46] 2024-05-15 09:39:29,202 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-05-15 11:39:46] 2024-05-15 09:39:29,223 | INFO     | sufficient remaining disk space (3002638270464 B)
[2024-05-15 11:39:46] 2024-05-15 09:39:29,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 11:39:46] 2024-05-15 09:39:29,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 11:39:46] 2024-05-15 09:39:29,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 11:39:46] 2024-05-15 09:39:29,926 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 11:39:46] 2024-05-15 09:39:29,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 11:39:46] 2024-05-15 09:39:29,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 11:39:46] 2024-05-15 09:39:30,002 | INFO     | all data control threads have been joined
[2024-05-15 11:39:46] 2024-05-15 09:39:30,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:39:46] 2024-05-15 09:39:30,037 | INFO     | aborting loop
[2024-05-15 11:39:46] 2024-05-15 09:39:30,164 | INFO     | all payload control threads have been joined
[2024-05-15 11:39:46] 2024-05-15 09:39:30,229 | INFO     | [job] retrieve thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:30,497 | INFO     | all job control threads have been joined
[2024-05-15 11:39:46] 2024-05-15 09:39:30,588 | INFO     | [job] validate thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:30,592 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:30,661 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:31,007 | INFO     | [data] control thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:31,030 | INFO     | [data] copytool_in thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:31,042 | INFO     | [job] job monitor thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:31,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:39:46] 2024-05-15 09:39:31,131 | INFO     | [payload] failed_post thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:31,169 | INFO     | [payload] control thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:31,379 | INFO     | [payload] validate_post thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:31,502 | INFO     | [job] control thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:31,696 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:31,920 | INFO     | [data] copytool_out thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:32,099 | INFO     | [job] queue monitor thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:32,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 11:39:46] 2024-05-15 09:39:36,492 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:39,571 | INFO     | job.realtimelogging is not enabled
[2024-05-15 11:39:46] 2024-05-15 09:39:40,572 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 11:39:46] 2024-05-15 09:39:40,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47230163194944)>', '<ExcThread(monitor, started 47230338647808)>']
[2024-05-15 11:39:46] 2024-05-15 09:39:40,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 11:39:46] 2024-05-15 09:39:40,983 | INFO     | [monitor] control thread has ended
[2024-05-15 11:39:46] 2024-05-15 09:39:45,994 | INFO     | all workflow threads have been joined
[2024-05-15 11:39:46] 2024-05-15 09:39:45,994 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 11:39:46] 2024-05-15 09:39:45,994 | INFO     | traces error code: 0
[2024-05-15 11:39:46] 2024-05-15 09:39:45,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 11:39:46] 2024-05-15 09:39:46,077 [wrapper] ==== pilot stdout END ====
[2024-05-15 11:39:46] 2024-05-15 09:39:46,080 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 11:39:46] 2024-05-15 09:39:46,082 [wrapper] pilotpid: 3409978
[2024-05-15 11:39:46] 2024-05-15 09:39:46,084 [wrapper] Pilot exit status: 0
[2024-05-15 11:39:46] 2024-05-15 09:39:46,095 [wrapper] pandaids: 6205824362
[2024-05-15 11:39:46] 2024-05-15 09:39:46,187 [wrapper] cleanup: SIGTERM to supervisor_pilot  351640 3409979
[2024-05-15 11:39:46] 2024-05-15 09:39:46,189 [wrapper] Test setup, not cleaning
[2024-05-15 11:39:46] 2024-05-15 09:39:46,191 [wrapper] ==== wrapper stdout END ====
[2024-05-15 11:39:46] 2024-05-15 09:39:46,193 [wrapper] ==== wrapper stderr END ====
[2024-05-15 11:39:46] 2024-05-15 09:39:46,197 [wrapper] apfmon messages muted
[2024-05-15 11:39:46]  *** Error codes and diagnostics ***
[2024-05-15 11:39:46]     "exeErrorCode": 0,
[2024-05-15 11:39:46]     "exeErrorDiag": "",
[2024-05-15 11:39:46]     "pilotErrorCode": 0,
[2024-05-15 11:39:46]     "pilotErrorDiag": "",
[2024-05-15 11:39:46]  *** Listing of results directory ***
[2024-05-15 11:39:46] total 879000
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc    467845 May 13 10:18 pilot3.tar.gz
[2024-05-15 11:39:46] -rwx------ 1 boinc boinc     32251 May 13 10:33 runpilot2-wrapper.sh
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc      5633 May 13 10:33 queuedata.json
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc       100 May 15 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 11:39:46] -rwxr-xr-x 1 boinc boinc      7986 May 15 07:57 run_atlas
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc       105 May 15 07:57 job.xml
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc      6642 May 15 07:57 init_data.xml
[2024-05-15 11:39:46] -rw-r--r-- 2 boinc boinc 615678075 May 15 07:57 EVNT.38776140._000125.pool.root.1
[2024-05-15 11:39:46] drwxrwx--x 2 boinc boinc      4096 May 15 07:57 shared
[2024-05-15 11:39:46] -rw-r--r-- 2 boinc boinc    479989 May 15 07:57 input.tar.gz
[2024-05-15 11:39:46] -rw-r--r-- 2 boinc boinc     17537 May 15 07:57 start_atlas.sh
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc         0 May 15 07:57 boinc_lockfile
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc      2613 May 15 07:57 pandaJob.out
[2024-05-15 11:39:46] -rw------- 1 boinc boinc       424 May 15 07:57 setup.sh.local
[2024-05-15 11:39:46] -rw------- 1 boinc boinc   1007426 May 15 07:57 agis_schedconf.cvmfs.json
[2024-05-15 11:39:46] -rw------- 1 boinc boinc   1324588 May 15 07:57 cric_ddmendpoints.json
[2024-05-15 11:39:46] drwx------ 4 boinc boinc      4096 May 15 07:57 pilot3
[2024-05-15 11:39:46] -rw------- 1 boinc boinc 277335017 May 15 11:38 HITS.38776146._003109.pool.root.1
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc       531 May 15 11:38 boinc_task_state.xml
[2024-05-15 11:39:46] -rw------- 1 boinc boinc        95 May 15 11:39 pilot_heartbeat.json
[2024-05-15 11:39:46] -rw------- 1 boinc boinc      1043 May 15 11:39 memory_monitor_summary.json
[2024-05-15 11:39:46] -rw------- 1 boinc boinc         0 May 15 11:39 agis_ddmendpoints.agis.ALL.json
[2024-05-15 11:39:46] -rw------- 1 boinc boinc    326182 May 15 11:39 log.38776146._003109.job.log.tgz.1
[2024-05-15 11:39:46] -rw------- 1 boinc boinc      7720 May 15 11:39 heartbeat.json
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc      8192 May 15 11:39 boinc_mmap_file
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc        28 May 15 11:39 wrapper_checkpoint.txt
[2024-05-15 11:39:46] -rw------- 1 boinc boinc      4294 May 15 11:39 pilotlog.txt
[2024-05-15 11:39:46] -rw------- 1 boinc boinc   1453723 May 15 11:39 log.38776146._003109.job.log.1
[2024-05-15 11:39:46] -rw------- 1 boinc boinc       357 May 15 11:39 output.list
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc       620 May 15 11:39 runtime_log
[2024-05-15 11:39:46] -rw------- 1 boinc boinc   1802240 May 15 11:39 result.tar.gz
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc     11410 May 15 11:39 runtime_log.err
[2024-05-15 11:39:46] -rw------- 1 boinc boinc       658 May 15 11:39 KUnKDmRIgQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmG0JKDm1wzDln.diag
[2024-05-15 11:39:46] -rw-r--r-- 1 boinc boinc     21348 May 15 11:39 stderr.txt
[2024-05-15 11:39:46] HITS file was successfully produced:
[2024-05-15 11:39:46] -rw------- 1 boinc boinc 277335017 May 15 11:38 shared/HITS.pool.root.1
[2024-05-15 11:39:46]  *** Contents of shared directory: ***
[2024-05-15 11:39:46] total 874348
[2024-05-15 11:39:46] -rw-r--r-- 2 boinc boinc 615678075 May 15 07:57 ATLAS.root_0
[2024-05-15 11:39:46] -rw-r--r-- 2 boinc boinc    479989 May 15 07:57 input.tar.gz
[2024-05-15 11:39:46] -rw-r--r-- 2 boinc boinc     17537 May 15 07:57 start_atlas.sh
[2024-05-15 11:39:46] -rw------- 1 boinc boinc 277335017 May 15 11:38 HITS.pool.root.1
[2024-05-15 11:39:46] -rw------- 1 boinc boinc   1802240 May 15 11:39 result.tar.gz
11:39:48 (3405358): run_atlas exited; CPU time 49813.478605
11:39:48 (3405358): called boinc_finish(0)

</stderr_txt>
]]>

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