Name a0bKDmtEgQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDm16WKDmD6esHo_0
Workunit 222970274
Created 13 May 2024, 8:30:48 UTC
Sent 13 May 2024, 9:55:35 UTC
Report deadline 21 May 2024, 9:55:35 UTC
Received 17 May 2024, 18:52:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10695181
Run time 1 hours 9 min 8 sec
CPU time 10 hours 24 min 52 sec
Validate state Valid
Credit 676.40
Device peak FLOPS 51.57 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.75 GB
Peak swap size 3.36 GB
Peak disk usage 1.39 GB

Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
09:29:13 (96883): wrapper (7.7.26015): starting
09:29:13 (96883): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 09:29:13] Arguments: --nthreads 12
[2024-05-17 09:29:13] Threads: 12
[2024-05-17 09:29:13] Checking for CVMFS
[2024-05-17 09:29:13] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 09:29:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 09:29:14] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 09:29:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 09:29:14] 2.9.2.0 140182 183717 138240 132848 1 108 35421097 45568001 14446 130560 0 1305292095 99.806 741631594 15751 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 09:29:14] CVMFS is ok
[2024-05-17 09:29:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 09:29:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 09:29:14] Further information can be found at the LHC@home message board.
[2024-05-17 09:29:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 09:29:14] Checking for apptainer binary...
[2024-05-17 09:29:14] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 09:29:14] Running /usr/bin/apptainer --version
[2024-05-17 09:29:14] apptainer version 1.1.8-1.el7
[2024-05-17 09:29:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 09:29:15] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0170.triumf.lcg
[2024-05-17 09:29:15] apptainer works
[2024-05-17 09:29:15] Set ATHENA_PROC_NUMBER=12
[2024-05-17 09:29:15] Set ATHENA_CORE_NUMBER=12
[2024-05-17 09:29:15] Starting ATLAS job with PandaID=6205824210
[2024-05-17 09:29:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 10:38:18]  *** The last 200 lines of the pilot log: ***
[2024-05-17 10:38:18]  guid=c5a0626a-3efa-417d-8b40-314337b79153
[2024-05-17 10:38:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 10:38:18]  is_tar=False
[2024-05-17 10:38:18]  lfn=log.38776146._003021.job.log.tgz.1
[2024-05-17 10:38:18]  mtime=0
[2024-05-17 10:38:18]  protocol_id=None
[2024-05-17 10:38:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 10:38:18]  replicas=None
[2024-05-17 10:38:18]  scope=mc23_13p6TeV
[2024-05-17 10:38:18]  status=None
[2024-05-17 10:38:18]  status_code=0
[2024-05-17 10:38:18]  storage_token=
[2024-05-17 10:38:18]  surl=/home/boinc/slots/0/PanDA_Pilot-6205824210/log.38776146._003021.job.log.tgz.1
[2024-05-17 10:38:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/8f/log.38776146._003021.job.log.tgz.1
[2024-05-17 10:38:18]  workdir=None
[2024-05-17 10:38:18] ]
[2024-05-17 10:38:18] 2024-05-17 17:37:52,952 | INFO     | transferring file log.38776146._003021.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6205824210/log.38776146._003021.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 10:38:18] 2024-05-17 17:37:52,953 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6205824210/log.38776146._003021.job.log.tgz.1 /home/boinc/slots/0/log.38776146._003021.job.log.t
[2024-05-17 10:38:18] 2024-05-17 17:37:53,007 | INFO     | adding to output.list: log.38776146._003021.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/8f/log.38776146._003021.job.log.tg
[2024-05-17 10:38:18] 2024-05-17 17:37:53,008 | INFO     | summary of transferred files:
[2024-05-17 10:38:18] 2024-05-17 17:37:53,008 | INFO     |  -- lfn=log.38776146._003021.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 10:38:18] 2024-05-17 17:37:53,008 | INFO     | stage-out finished correctly
[2024-05-17 10:38:18] 2024-05-17 17:37:54,359 | INFO     | monitor loop #325: job 0:6205824210 is in state 'finished'
[2024-05-17 10:38:18] 2024-05-17 17:37:54,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:18] 2024-05-17 17:37:56,094 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 10:38:18] 2024-05-17 17:37:56,162 | INFO     | job 6205824210 has state=finished
[2024-05-17 10:38:18] 2024-05-17 17:37:56,162 | INFO     | preparing for final server update for job 6205824210 in state='finished'
[2024-05-17 10:38:18] 2024-05-17 17:37:56,163 | INFO     | this job has now completed (state=finished)
[2024-05-17 10:38:18] 2024-05-17 17:37:56,163 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 10:38:18] 2024-05-17 17:37:56,163 | INFO     | job 6205824210 has finished - writing final server update
[2024-05-17 10:38:18] 2024-05-17 17:37:56,163 | INFO     | total number of processed events: 400 (read)
[2024-05-17 10:38:18] 2024-05-17 17:37:56,169 | INFO     | executing command: lscpu
[2024-05-17 10:38:18] 2024-05-17 17:37:56,242 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 10:38:18] 2024-05-17 17:37:56,242 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 10:38:18] 2024-05-17 17:37:56,333 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 10:38:18] 2024-05-17 17:37:56,862 | INFO     | monitor loop #326: job 0:6205824210 is in state 'finished'
[2024-05-17 10:38:18] 2024-05-17 17:37:56,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:18] 2024-05-17 17:37:59,365 | INFO     | monitor loop #327: job 0:6205824210 is in state 'finished'
[2024-05-17 10:38:18] 2024-05-17 17:37:59,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:18] 2024-05-17 17:38:01,869 | INFO     | monitor loop #328: job 0:6205824210 is in state 'finished'
[2024-05-17 10:38:18] 2024-05-17 17:38:01,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:18] 2024-05-17 17:38:02,839 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 10:38:18] 2024-05-17 17:38:02,839 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6205824210/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 10:38:18] 2024-05-17 17:38:02,841 | INFO     | extracted standard info from prmon json
[2024-05-17 10:38:18] 2024-05-17 17:38:02,841 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 10:38:18] 2024-05-17 17:38:02,841 | WARNING  | GPU info not found in prmon json
[2024-05-17 10:38:18] 2024-05-17 17:38:02,842 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 10:38:18] 2024-05-17 17:38:02,842 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 10:38:18] 2024-05-17 17:38:02,845 | INFO     | fitting pss+swap vs Time
[2024-05-17 10:38:18] 2024-05-17 17:38:02,845 | INFO     | model: linear, x: [1715963713.0, 1715963774.0, 1715963835.0, 1715963896.0, 1715963957.0, 1715964018.0, 1715964079.0, 1715964140.0, 1715964201.0, 1715964262.0, 1715
[2024-05-17 10:38:18] 2024-05-17 17:38:02,845 | INFO     | sum of square deviations: 66959395.0
[2024-05-17 10:38:18] 2024-05-17 17:38:02,846 | INFO     | sum of deviations: 17906112508.000004
[2024-05-17 10:38:18] 2024-05-17 17:38:02,846 | INFO     | mean x: 1715965512.5
[2024-05-17 10:38:18] 2024-05-17 17:38:02,846 | INFO     | mean y: 2706345.3333333335
[2024-05-17 10:38:18] 2024-05-17 17:38:02,846 | INFO     | -- intersect: -458876462540.1216
[2024-05-17 10:38:18] 2024-05-17 17:38:02,846 | INFO     | intersect: -458876462540.1216
[2024-05-17 10:38:18] 2024-05-17 17:38:02,846 | INFO     | chi2: 2.3744135875332897
[2024-05-17 10:38:18] 2024-05-17 17:38:02,847 | INFO     | -- intersect: -458876462540.1216
[2024-05-17 10:38:18] 2024-05-17 17:38:02,847 | INFO     | current memory leak: 267.42 B/s (using 60 data points, chi2=2.37)
[2024-05-17 10:38:18] 2024-05-17 17:38:02,847 | INFO     | ..............................
[2024-05-17 10:38:18] 2024-05-17 17:38:02,848 | INFO     | . Timing measurements:
[2024-05-17 10:38:18] 2024-05-17 17:38:02,848 | INFO     | . get job = 0 s
[2024-05-17 10:38:18] 2024-05-17 17:38:02,848 | INFO     | . initial setup = 1 s
[2024-05-17 10:38:18] 2024-05-17 17:38:02,848 | INFO     | . payload setup = 8 s
[2024-05-17 10:38:18] 2024-05-17 17:38:02,848 | INFO     | . stage-in = 0 s
[2024-05-17 10:38:18] 2024-05-17 17:38:02,848 | INFO     | . payload execution = 4067 s
[2024-05-17 10:38:18] 2024-05-17 17:38:02,848 | INFO     | . stage-out = 0 s
[2024-05-17 10:38:18] 2024-05-17 17:38:02,848 | INFO     | . log creation = 0 s
[2024-05-17 10:38:18] 2024-05-17 17:38:02,848 | INFO     | ..............................
[2024-05-17 10:38:18] 2024-05-17 17:38:02,939 | INFO     | 
[2024-05-17 10:38:18] 2024-05-17 17:38:02,940 | INFO     | job summary report
[2024-05-17 10:38:18] 2024-05-17 17:38:02,940 | INFO     | --------------------------------------------------
[2024-05-17 10:38:18] 2024-05-17 17:38:02,940 | INFO     | PanDA job id: 6205824210
[2024-05-17 10:38:18] 2024-05-17 17:38:02,940 | INFO     | task id: 38776146
[2024-05-17 10:38:18] 2024-05-17 17:38:02,940 | INFO     | errors: (none)
[2024-05-17 10:38:18] 2024-05-17 17:38:02,940 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 10:38:18] 2024-05-17 17:38:02,941 | INFO     | pilot state: finished 
[2024-05-17 10:38:18] 2024-05-17 17:38:02,941 | INFO     | transexitcode: 0
[2024-05-17 10:38:18] 2024-05-17 17:38:02,941 | INFO     | exeerrorcode: 0
[2024-05-17 10:38:18] 2024-05-17 17:38:02,941 | INFO     | exeerrordiag: 
[2024-05-17 10:38:18] 2024-05-17 17:38:02,941 | INFO     | exitcode: 0
[2024-05-17 10:38:18] 2024-05-17 17:38:02,941 | INFO     | exitmsg: OK
[2024-05-17 10:38:18] 2024-05-17 17:38:02,941 | INFO     | cpuconsumptiontime: 37586 s
[2024-05-17 10:38:18] 2024-05-17 17:38:02,941 | INFO     | nevents: 400
[2024-05-17 10:38:18] 2024-05-17 17:38:02,941 | INFO     | neventsw: 0
[2024-05-17 10:38:18] 2024-05-17 17:38:02,942 | INFO     | pid: 107811
[2024-05-17 10:38:18] 2024-05-17 17:38:02,942 | INFO     | pgrp: 107811
[2024-05-17 10:38:18] 2024-05-17 17:38:02,942 | INFO     | corecount: 12
[2024-05-17 10:38:18] 2024-05-17 17:38:02,942 | INFO     | event service: False
[2024-05-17 10:38:18] 2024-05-17 17:38:02,942 | INFO     | sizes: {0: 2392001, 1: 2392200, 8: 2392406, 11: 2392434, 4079: 2418253, 4080: 2418252, 4082: 2427390, 4085: 2427446, 4092: 2427616}
[2024-05-17 10:38:18] 2024-05-17 17:38:02,942 | INFO     | --------------------------------------------------
[2024-05-17 10:38:18] 2024-05-17 17:38:02,942 | INFO     | 
[2024-05-17 10:38:18] 2024-05-17 17:38:02,942 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 10:38:18] 2024-05-17 17:38:02,995 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,995 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,995 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,995 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,997 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 10:38:18] 2024-05-17 17:38:02,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,997 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 10:38:18] 2024-05-17 17:38:02,997 | INFO     | job 6205824210 has completed (purged errors)
[2024-05-17 10:38:18] 2024-05-17 17:38:02,997 | INFO     | overall cleanup function is called
[2024-05-17 10:38:18] 2024-05-17 17:38:04,006 | INFO     | --- collectZombieJob: --- 10, [107811]
[2024-05-17 10:38:18] 2024-05-17 17:38:04,006 | INFO     | zombie collector waiting for pid 107811
[2024-05-17 10:38:18] 2024-05-17 17:38:04,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 10:38:18] 2024-05-17 17:38:05,012 | INFO     | collected zombie processes
[2024-05-17 10:38:18] 2024-05-17 17:38:05,013 | INFO     | will now attempt to kill all subprocesses of pid=107811
[2024-05-17 10:38:18] 2024-05-17 17:38:05,186 | INFO     | process IDs to be killed: [107811] (in reverse order)
[2024-05-17 10:38:18] 2024-05-17 17:38:05,316 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 10:38:18] 2024-05-17 17:38:05,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 10:38:18] 2024-05-17 17:38:05,325 | INFO     | did not find any defunct processes belonging to 107811
[2024-05-17 10:38:18] 2024-05-17 17:38:05,332 | INFO     | did not find any defunct processes belonging to 107811
[2024-05-17 10:38:18] 2024-05-17 17:38:05,332 | INFO     | ready for new job
[2024-05-17 10:38:18] 2024-05-17 17:38:05,333 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 10:38:18] 2024-05-17 17:38:05,334 | INFO     | *************************************
[2024-05-17 10:38:18] 2024-05-17 17:38:05,334 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 10:38:18] 2024-05-17 17:38:05,334 | INFO     | *************************************
[2024-05-17 10:38:18] 2024-05-17 17:38:05,334 | INFO     | 
[2024-05-17 10:38:18] 2024-05-17 17:38:05,337 | INFO     | architecture information:
[2024-05-17 10:38:18] 2024-05-17 17:38:05,337 | INFO     | executing command: cat /etc/os-release
[2024-05-17 10:38:18] 2024-05-17 17:38:05,378 | INFO     | cat /etc/os-release:
[2024-05-17 10:38:18] NAME="CentOS Linux"
[2024-05-17 10:38:18] VERSION="7 (Core)"
[2024-05-17 10:38:18] ID="centos"
[2024-05-17 10:38:18] ID_LIKE="rhel fedora"
[2024-05-17 10:38:18] VERSION_ID="7"
[2024-05-17 10:38:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 10:38:18] ANSI_COLOR="0;31"
[2024-05-17 10:38:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 10:38:18] HOME_URL="https://www.centos.org/"
[2024-05-17 10:38:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 10:38:18] 
[2024-05-17 10:38:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 10:38:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 10:38:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 10:38:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 10:38:18] 
[2024-05-17 10:38:18] 2024-05-17 17:38:05,378 | INFO     | *************************************
[2024-05-17 10:38:18] 2024-05-17 17:38:05,881 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 10:38:18] 2024-05-17 17:38:05,928 | INFO     | sufficient remaining disk space (2541076086784 B)
[2024-05-17 10:38:18] 2024-05-17 17:38:05,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 10:38:18] 2024-05-17 17:38:05,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 10:38:18] 2024-05-17 17:38:05,929 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 10:38:18] 2024-05-17 17:38:05,929 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 10:38:18] 2024-05-17 17:38:05,929 | INFO     | aborting loop
[2024-05-17 10:38:18] 2024-05-17 17:38:05,929 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 10:38:18] 2024-05-17 17:38:05,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 10:38:18] 2024-05-17 17:38:05,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 10:38:18] 2024-05-17 17:38:06,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 10:38:18] 2024-05-17 17:38:06,205 | INFO     | all data control threads have been joined
[2024-05-17 10:38:18] 2024-05-17 17:38:06,314 | INFO     | all payload control threads have been joined
[2024-05-17 10:38:18] 2024-05-17 17:38:06,324 | INFO     | all job control threads have been joined
[2024-05-17 10:38:18] 2024-05-17 17:38:06,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 10:38:18] 2024-05-17 17:38:06,934 | INFO     | [job] retrieve thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:06,935 | INFO     | [job] job monitor thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:07,085 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:07,211 | INFO     | [data] control thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:07,241 | INFO     | [payload] failed_post thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:07,319 | INFO     | [payload] control thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:07,326 | INFO     | [job] control thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:07,583 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:07,822 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:07,901 | INFO     | [payload] validate_post thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:07,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 10:38:18] 2024-05-17 17:38:08,101 | INFO     | [data] copytool_out thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:08,199 | INFO     | [job] validate thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:08,237 | INFO     | [data] copytool_in thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:08,280 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:08,957 | INFO     | [job] queue monitor thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:10,677 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 10:38:18] 2024-05-17 17:38:12,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258108462912)>', '<ExcThread(monitor, started 140257810945792)>']
[2024-05-17 10:38:18] 2024-05-17 17:38:12,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 10:38:18] 2024-05-17 17:38:12,967 | INFO     | [monitor] control thread has ended
[2024-05-17 10:38:18] 2024-05-17 17:38:17,552 | INFO     | all workflow threads have been joined
[2024-05-17 10:38:18] 2024-05-17 17:38:17,553 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 10:38:18] 2024-05-17 17:38:17,553 | INFO     | traces error code: 0
[2024-05-17 10:38:18] 2024-05-17 17:38:17,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 10:38:18] 2024-05-17 17:38:17,661 [wrapper] ==== pilot stdout END ====
[2024-05-17 10:38:18] 2024-05-17 17:38:17,675 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 10:38:18] 2024-05-17 17:38:17,687 [wrapper] pilotpid: 101135
[2024-05-17 10:38:18] 2024-05-17 17:38:17,698 [wrapper] Pilot exit status: 0
[2024-05-17 10:38:18] 2024-05-17 17:38:17,735 [wrapper] pandaids: 6205824210
[2024-05-17 10:38:18] 2024-05-17 17:38:17,798 [wrapper] cleanup: SIGTERM to supervisor_pilot  15242 101136
[2024-05-17 10:38:18] 2024-05-17 17:38:17,810 [wrapper] Test setup, not cleaning
[2024-05-17 10:38:18] 2024-05-17 17:38:17,824 [wrapper] ==== wrapper stdout END ====
[2024-05-17 10:38:18] 2024-05-17 17:38:17,835 [wrapper] ==== wrapper stderr END ====
[2024-05-17 10:38:18] 2024-05-17 17:38:17,856 [wrapper] apfmon messages muted
[2024-05-17 10:38:18]  *** Error codes and diagnostics ***
[2024-05-17 10:38:18]     "exeErrorCode": 0,
[2024-05-17 10:38:18]     "exeErrorDiag": "",
[2024-05-17 10:38:18]     "pilotErrorCode": 0,
[2024-05-17 10:38:18]     "pilotErrorDiag": "",
[2024-05-17 10:38:18]  *** Listing of results directory ***
[2024-05-17 10:38:18] total 868628
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc    467845 May 13 01:18 pilot3.tar.gz
[2024-05-17 10:38:18] -rwx------ 1 boinc boinc     32251 May 13 01:29 runpilot2-wrapper.sh
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc      5633 May 13 01:29 queuedata.json
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc       100 May 17 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 10:38:18] -rwxr-xr-x 1 boinc boinc      7986 May 17 09:29 run_atlas
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc       105 May 17 09:29 job.xml
[2024-05-17 10:38:18] -rw-r--r-- 2 boinc boinc 611889410 May 17 09:29 EVNT.38776140._000121.pool.root.1
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc      6652 May 17 09:29 init_data.xml
[2024-05-17 10:38:18] drwxrwx--x 2 boinc boinc      4096 May 17 09:29 shared
[2024-05-17 10:38:18] -rw-r--r-- 2 boinc boinc    479994 May 17 09:29 input.tar.gz
[2024-05-17 10:38:18] -rw-r--r-- 2 boinc boinc     17537 May 17 09:29 start_atlas.sh
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc         0 May 17 09:29 boinc_lockfile
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc      2614 May 17 09:29 pandaJob.out
[2024-05-17 10:38:18] -rw------- 1 boinc boinc       424 May 17 09:29 setup.sh.local
[2024-05-17 10:38:18] -rw------- 1 boinc boinc   1019452 May 17 09:29 agis_schedconf.cvmfs.json
[2024-05-17 10:38:18] -rw------- 1 boinc boinc         0 May 17 09:29 agis_ddmendpoints.agis.ALL.json
[2024-05-17 10:38:18] -rw------- 1 boinc boinc   1324701 May 17 09:29 cric_ddmendpoints.json
[2024-05-17 10:38:18] drwx------ 4 boinc boinc      4096 May 17 09:29 pilot3
[2024-05-17 10:38:18] -rw------- 1 boinc boinc 272491067 May 17 10:37 HITS.38776146._003021.pool.root.1
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc       530 May 17 10:37 boinc_task_state.xml
[2024-05-17 10:38:18] -rw------- 1 boinc boinc        95 May 17 10:37 pilot_heartbeat.json
[2024-05-17 10:38:18] -rw------- 1 boinc boinc      1056 May 17 10:37 memory_monitor_summary.json
[2024-05-17 10:38:18] -rw------- 1 boinc boinc    360961 May 17 10:37 log.38776146._003021.job.log.tgz.1
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc        27 May 17 10:38 wrapper_checkpoint.txt
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc      8192 May 17 10:38 boinc_mmap_file
[2024-05-17 10:38:18] -rw------- 1 boinc boinc      7765 May 17 10:38 heartbeat.json
[2024-05-17 10:38:18] -rw------- 1 boinc boinc      4333 May 17 10:38 pilotlog.txt
[2024-05-17 10:38:18] -rw------- 1 boinc boinc    416260 May 17 10:38 log.38776146._003021.job.log.1
[2024-05-17 10:38:18] -rw------- 1 boinc boinc       357 May 17 10:38 output.list
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc       620 May 17 10:38 runtime_log
[2024-05-17 10:38:18] -rw------- 1 boinc boinc    798720 May 17 10:38 result.tar.gz
[2024-05-17 10:38:18] -rw------- 1 boinc boinc       657 May 17 10:38 a0bKDmtEgQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDm16WKDmD6esHo.diag
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc     11286 May 17 10:38 runtime_log.err
[2024-05-17 10:38:18] -rw-r--r-- 1 boinc boinc     21872 May 17 10:38 stderr.txt
[2024-05-17 10:38:18] HITS file was successfully produced:
[2024-05-17 10:38:18] -rw------- 1 boinc boinc 272491067 May 17 10:37 shared/HITS.pool.root.1
[2024-05-17 10:38:18]  *** Contents of shared directory: ***
[2024-05-17 10:38:18] total 864940
[2024-05-17 10:38:18] -rw-r--r-- 2 boinc boinc 611889410 May 17 09:29 ATLAS.root_0
[2024-05-17 10:38:18] -rw-r--r-- 2 boinc boinc    479994 May 17 09:29 input.tar.gz
[2024-05-17 10:38:18] -rw-r--r-- 2 boinc boinc     17537 May 17 09:29 start_atlas.sh
[2024-05-17 10:38:18] -rw------- 1 boinc boinc 272491067 May 17 10:37 HITS.pool.root.1
[2024-05-17 10:38:18] -rw------- 1 boinc boinc    798720 May 17 10:38 result.tar.gz
10:38:20 (96883): run_atlas exited; CPU time 37314.115360
10:38:20 (96883): called boinc_finish(0)

</stderr_txt>
]]>


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