Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:09:28 (25839): wrapper (7.7.26015): starting
05:09:28 (25839): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 05:09:28] Arguments: --nthreads 12
[2024-05-16 05:09:28] Threads: 12
[2024-05-16 05:09:28] Checking for CVMFS
[2024-05-16 05:09:28] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 05:09:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 05:09:28] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 05:09:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 05:09:31] 2.10.1.0 269156 182017 276380 132798 3 672 41205796 45568000 24637 130560 0 1049744183 99.763 644893144 19248 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-16 05:09:31] CVMFS is ok
[2024-05-16 05:09:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 05:09:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 05:09:31] Further information can be found at the LHC@home message board.
[2024-05-16 05:09:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 05:09:31] Checking for apptainer binary...
[2024-05-16 05:09:31] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 05:09:31] Running /usr/bin/apptainer --version
[2024-05-16 05:09:32] apptainer version 1.1.8-1.el7
[2024-05-16 05:09:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 05:09:35] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0111.triumf.lcg
[2024-05-16 05:09:35] apptainer works
[2024-05-16 05:09:35] Set ATHENA_PROC_NUMBER=12
[2024-05-16 05:09:35] Set ATHENA_CORE_NUMBER=12
[2024-05-16 05:09:36] Starting ATLAS job with PandaID=6205822559
[2024-05-16 05:09:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 23:43:42]  *** The last 200 lines of the pilot log: ***
[2024-05-16 23:43:42] 2024-05-17 06:43:27,059 | INFO     | intersect: -7547835640.23112
[2024-05-16 23:43:42] 2024-05-17 06:43:27,060 | INFO     | chi2: 9.016740361057273
[2024-05-16 23:43:42] 2024-05-17 06:43:27,060 | INFO     | current chi2=9.016740361057273 (change=7.957468623476961 %)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,060 | INFO     | right removable region: 1084
[2024-05-16 23:43:42] 2024-05-17 06:43:27,061 | INFO     | model: linear, x: [1715862028.0, 1715862088.0, 1715862153.0, 1715862217.0, 1715862278.0, 1715862334.0, 1715862393.0, 1715862454.0, 1715862516.0, 1715862576.0, 1715
[2024-05-16 23:43:42] 2024-05-17 06:43:27,061 | INFO     | sum of square deviations: 396554783771.49634
[2024-05-16 23:43:42] 2024-05-17 06:43:27,080 | INFO     | sum of deviations: 1312724553793.3213
[2024-05-16 23:43:42] 2024-05-17 06:43:27,080 | INFO     | mean x: 1715895104.9225807
[2024-05-16 23:43:42] 2024-05-17 06:43:27,080 | INFO     | mean y: 2702211.3133640555
[2024-05-16 23:43:42] 2024-05-17 06:43:27,080 | INFO     | -- intersect: -5677465392.625007
[2024-05-16 23:43:42] 2024-05-17 06:43:27,080 | INFO     | intersect: -5677465392.625007
[2024-05-16 23:43:42] 2024-05-17 06:43:27,081 | INFO     | chi2: 6.349190751206383
[2024-05-16 23:43:42] 2024-05-17 06:43:27,081 | INFO     | current chi2=6.349190751206383 (change=35.1877102442241 %)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,082 | INFO     | model: linear, x: [1715862334.0, 1715862393.0, 1715862454.0, 1715862516.0, 1715862576.0, 1715862638.0, 1715862698.0, 1715862765.0, 1715862821.0, 1715862881.0, 1715
[2024-05-16 23:43:42] 2024-05-17 06:43:27,082 | INFO     | sum of square deviations: 391100397047.5105
[2024-05-16 23:43:42] 2024-05-17 06:43:27,101 | INFO     | sum of deviations: 1032100990955.4874
[2024-05-16 23:43:42] 2024-05-17 06:43:27,102 | INFO     | mean x: 1715895257.4787037
[2024-05-16 23:43:42] 2024-05-17 06:43:27,102 | INFO     | mean y: 2710059.5212962963
[2024-05-16 23:43:42] 2024-05-17 06:43:27,102 | INFO     | -- intersect: -4525480678.6856365
[2024-05-16 23:43:42] 2024-05-17 06:43:27,102 | INFO     | intersect: -4525480678.6856365
[2024-05-16 23:43:42] 2024-05-17 06:43:27,103 | INFO     | chi2: 4.382100622170441
[2024-05-16 23:43:42] 2024-05-17 06:43:27,103 | INFO     | current chi2=4.382100622170441 (change=30.981745644705725 %)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,103 | INFO     | model: linear, x: [1715862638.0, 1715862698.0, 1715862765.0, 1715862821.0, 1715862881.0, 1715862945.0, 1715863011.0, 1715863066.0, 1715863133.0, 1715863188.0, 1715
[2024-05-16 23:43:42] 2024-05-17 06:43:27,104 | INFO     | sum of square deviations: 385695192017.28735
[2024-05-16 23:43:42] 2024-05-17 06:43:27,122 | INFO     | sum of deviations: 771896881957.753
[2024-05-16 23:43:42] 2024-05-17 06:43:27,122 | INFO     | mean x: 1715895410.0502326
[2024-05-16 23:43:42] 2024-05-17 06:43:27,122 | INFO     | mean y: 2717404.1897674417
[2024-05-16 23:43:42] 2024-05-17 06:43:27,123 | INFO     | -- intersect: -3431326743.0964375
[2024-05-16 23:43:42] 2024-05-17 06:43:27,123 | INFO     | intersect: -3431326743.0964375
[2024-05-16 23:43:42] 2024-05-17 06:43:27,123 | INFO     | chi2: 2.7087711667608927
[2024-05-16 23:43:42] 2024-05-17 06:43:27,124 | INFO     | current chi2=2.7087711667608927 (change=38.185555277841914 %)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,124 | INFO     | model: linear, x: [1715862945.0, 1715863011.0, 1715863066.0, 1715863133.0, 1715863188.0, 1715863250.0, 1715863322.0, 1715863372.0, 1715863436.0, 1715863499.0, 1715
[2024-05-16 23:43:42] 2024-05-17 06:43:27,125 | INFO     | sum of square deviations: 380340315672.6627
[2024-05-16 23:43:42] 2024-05-17 06:43:27,143 | INFO     | sum of deviations: 569650141798.2052
[2024-05-16 23:43:42] 2024-05-17 06:43:27,143 | INFO     | mean x: 1715895562.617757
[2024-05-16 23:43:42] 2024-05-17 06:43:27,143 | INFO     | mean y: 2723163.010280374
[2024-05-16 23:43:42] 2024-05-17 06:43:27,144 | INFO     | -- intersect: -2567238816.5064025
[2024-05-16 23:43:42] 2024-05-17 06:43:27,144 | INFO     | intersect: -2567238816.5064025
[2024-05-16 23:43:42] 2024-05-17 06:43:27,144 | INFO     | chi2: 1.653315532755217
[2024-05-16 23:43:42] 2024-05-17 06:43:27,145 | INFO     | current chi2=1.653315532755217 (change=38.96437052184712 %)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,145 | INFO     | model: linear, x: [1715863250.0, 1715863322.0, 1715863372.0, 1715863436.0, 1715863499.0, 1715863572.0, 1715863615.0, 1715863674.0, 1715863738.0, 1715863796.0, 1715
[2024-05-16 23:43:42] 2024-05-17 06:43:27,146 | INFO     | sum of square deviations: 375036187243.55524
[2024-05-16 23:43:42] 2024-05-17 06:43:27,164 | INFO     | sum of deviations: 450623257815.2781
[2024-05-16 23:43:42] 2024-05-17 06:43:27,164 | INFO     | mean x: 1715895715.171831
[2024-05-16 23:43:42] 2024-05-17 06:43:27,164 | INFO     | mean y: 2726585.9492957746
[2024-05-16 23:43:42] 2024-05-17 06:43:27,164 | INFO     | -- intersect: -2059001171.377392
[2024-05-16 23:43:42] 2024-05-17 06:43:27,164 | INFO     | intersect: -2059001171.377392
[2024-05-16 23:43:42] 2024-05-17 06:43:27,165 | INFO     | chi2: 1.3223321224039766
[2024-05-16 23:43:42] 2024-05-17 06:43:27,165 | INFO     | current chi2=1.3223321224039766 (change=20.01937342230513 %)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,165 | INFO     | left removable region: 50
[2024-05-16 23:43:42] 2024-05-17 06:43:27,166 | INFO     | model: linear, x: [1715864772.0, 1715864833.0, 1715864896.0, 1715864959.0, 1715865016.0, 1715865077.0, 1715865144.0, 1715865201.0, 1715865264.0, 1715865325.0, 1715
[2024-05-16 23:43:42] 2024-05-17 06:43:27,166 | INFO     | sum of square deviations: 343245443280.6584
[2024-05-16 23:43:42] 2024-05-17 06:43:27,183 | INFO     | sum of deviations: 248258189830.09668
[2024-05-16 23:43:42] 2024-05-17 06:43:27,184 | INFO     | mean x: 1715896294.935203
[2024-05-16 23:43:42] 2024-05-17 06:43:27,184 | INFO     | mean y: 2736882.7775628627
[2024-05-16 23:43:42] 2024-05-17 06:43:27,184 | INFO     | -- intersect: -1238314721.710808
[2024-05-16 23:43:42] 2024-05-17 06:43:27,184 | INFO     | intersect: -1238314721.710808
[2024-05-16 23:43:42] 2024-05-17 06:43:27,185 | INFO     | chi2: 0.02051414738073477
[2024-05-16 23:43:42] 2024-05-17 06:43:27,185 | INFO     | -- intersect: -1238314721.710808
[2024-05-16 23:43:42] 2024-05-17 06:43:27,185 | INFO     | current memory leak: 0.72 B/s (using 1034 data points, chi2=0.02)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | ..............................
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | . Timing measurements:
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | . get job = 0 s
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | . initial setup = 2 s
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | . payload setup = 52 s
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | . stage-in = 0 s
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | . payload execution = 66506 s
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | . stage-out = 2 s
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | . log creation = 0 s
[2024-05-16 23:43:42] 2024-05-17 06:43:27,186 | INFO     | ..............................
[2024-05-16 23:43:42] 2024-05-17 06:43:27,255 | INFO     | 
[2024-05-16 23:43:42] 2024-05-17 06:43:27,255 | INFO     | job summary report
[2024-05-16 23:43:42] 2024-05-17 06:43:27,255 | INFO     | --------------------------------------------------
[2024-05-16 23:43:42] 2024-05-17 06:43:27,255 | INFO     | PanDA job id: 6205822559
[2024-05-16 23:43:42] 2024-05-17 06:43:27,256 | INFO     | task id: 38776146
[2024-05-16 23:43:42] 2024-05-17 06:43:27,256 | INFO     | errors: (none)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,256 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 23:43:42] 2024-05-17 06:43:27,256 | INFO     | pilot state: finished 
[2024-05-16 23:43:42] 2024-05-17 06:43:27,256 | INFO     | transexitcode: 0
[2024-05-16 23:43:42] 2024-05-17 06:43:27,256 | INFO     | exeerrorcode: 0
[2024-05-16 23:43:42] 2024-05-17 06:43:27,256 | INFO     | exeerrordiag: 
[2024-05-16 23:43:42] 2024-05-17 06:43:27,256 | INFO     | exitcode: 0
[2024-05-16 23:43:42] 2024-05-17 06:43:27,256 | INFO     | exitmsg: OK
[2024-05-16 23:43:42] 2024-05-17 06:43:27,257 | INFO     | cpuconsumptiontime: 59236 s
[2024-05-16 23:43:42] 2024-05-17 06:43:27,257 | INFO     | nevents: 400
[2024-05-16 23:43:42] 2024-05-17 06:43:27,257 | INFO     | neventsw: 0
[2024-05-16 23:43:42] 2024-05-17 06:43:27,257 | INFO     | pid: 67853
[2024-05-16 23:43:42] 2024-05-17 06:43:27,257 | INFO     | pgrp: 67853
[2024-05-16 23:43:42] 2024-05-17 06:43:27,257 | INFO     | corecount: 12
[2024-05-16 23:43:42] 2024-05-17 06:43:27,257 | INFO     | event service: False
[2024-05-16 23:43:42] 2024-05-17 06:43:27,257 | INFO     | sizes: {0: 2391950, 1: 2392149, 12: 2392149, 22: 2392177, 36: 2392205, 40: 2392439, 48: 2392595, 66562: 2439581, 66563: 2439580, 66565: 2448590, 66567: 2448646, 66
[2024-05-16 23:43:42] 2024-05-17 06:43:27,258 | INFO     | --------------------------------------------------
[2024-05-16 23:43:42] 2024-05-17 06:43:27,258 | INFO     | 
[2024-05-16 23:43:42] 2024-05-17 06:43:27,258 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-16 23:43:42] 2024-05-17 06:43:27,283 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,283 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,283 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,285 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 23:43:42] 2024-05-17 06:43:27,285 | INFO     | job 6205822559 has completed (purged errors)
[2024-05-16 23:43:42] 2024-05-17 06:43:27,285 | INFO     | overall cleanup function is called
[2024-05-16 23:43:42] 2024-05-17 06:43:28,294 | INFO     | --- collectZombieJob: --- 10, [67853]
[2024-05-16 23:43:42] 2024-05-17 06:43:28,294 | INFO     | zombie collector waiting for pid 67853
[2024-05-16 23:43:42] 2024-05-17 06:43:28,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 23:43:42] 2024-05-17 06:43:29,299 | INFO     | collected zombie processes
[2024-05-16 23:43:42] 2024-05-17 06:43:29,299 | INFO     | will now attempt to kill all subprocesses of pid=67853
[2024-05-16 23:43:42] 2024-05-17 06:43:29,526 | INFO     | process IDs to be killed: [67853] (in reverse order)
[2024-05-16 23:43:42] 2024-05-17 06:43:29,654 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 23:43:42] 2024-05-17 06:43:29,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 23:43:42] 2024-05-17 06:43:29,667 | INFO     | did not find any defunct processes belonging to 67853
[2024-05-16 23:43:42] 2024-05-17 06:43:29,675 | INFO     | did not find any defunct processes belonging to 67853
[2024-05-16 23:43:42] 2024-05-17 06:43:29,675 | INFO     | ready for new job
[2024-05-16 23:43:42] 2024-05-17 06:43:29,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 23:43:42] 2024-05-17 06:43:29,679 | INFO     | *************************************
[2024-05-16 23:43:42] 2024-05-17 06:43:29,679 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 23:43:42] 2024-05-17 06:43:29,679 | INFO     | *************************************
[2024-05-16 23:43:42] 2024-05-17 06:43:29,679 | INFO     | 
[2024-05-16 23:43:42] 2024-05-17 06:43:29,682 | INFO     | architecture information:
[2024-05-16 23:43:42] 2024-05-17 06:43:29,682 | INFO     | executing command: cat /etc/os-release
[2024-05-16 23:43:42] 2024-05-17 06:43:29,703 | INFO     | cat /etc/os-release:
[2024-05-16 23:43:42] NAME="CentOS Linux"
[2024-05-16 23:43:42] VERSION="7 (Core)"
[2024-05-16 23:43:42] ID="centos"
[2024-05-16 23:43:42] ID_LIKE="rhel fedora"
[2024-05-16 23:43:42] VERSION_ID="7"
[2024-05-16 23:43:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 23:43:42] ANSI_COLOR="0;31"
[2024-05-16 23:43:42] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 23:43:42] HOME_URL="https://www.centos.org/"
[2024-05-16 23:43:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 23:43:42] 
[2024-05-16 23:43:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 23:43:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 23:43:42] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 23:43:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 23:43:42] 
[2024-05-16 23:43:42] 2024-05-17 06:43:29,704 | INFO     | *************************************
[2024-05-16 23:43:42] 2024-05-17 06:43:30,206 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-16 23:43:42] 2024-05-17 06:43:30,231 | INFO     | sufficient remaining disk space (1967585755136 B)
[2024-05-16 23:43:42] 2024-05-17 06:43:30,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 23:43:42] 2024-05-17 06:43:30,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 23:43:42] 2024-05-17 06:43:30,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 23:43:42] 2024-05-17 06:43:30,356 | INFO     | all data control threads have been joined
[2024-05-16 23:43:42] 2024-05-17 06:43:30,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 23:43:42] 2024-05-17 06:43:30,468 | INFO     | aborting loop
[2024-05-16 23:43:42] 2024-05-17 06:43:30,550 | INFO     | all job control threads have been joined
[2024-05-16 23:43:42] 2024-05-17 06:43:31,027 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 23:43:42] 2024-05-17 06:43:31,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 23:43:42] 2024-05-17 06:43:31,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 23:43:42] 2024-05-17 06:43:31,237 | INFO     | [job] retrieve thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:31,326 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:31,326 | INFO     | [job] validate thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:31,361 | INFO     | [data] control thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:31,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 23:43:42] 2024-05-17 06:43:31,422 | INFO     | all payload control threads have been joined
[2024-05-16 23:43:42] 2024-05-17 06:43:31,472 | INFO     | [job] job monitor thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:31,555 | INFO     | [job] control thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:31,582 | INFO     | [data] copytool_in thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:31,644 | INFO     | [payload] failed_post thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:31,875 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:32,016 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:32,237 | INFO     | [data] copytool_out thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:32,260 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 23:43:42] 2024-05-17 06:43:32,339 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:32,401 | INFO     | [payload] validate_post thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:32,424 | INFO     | [payload] control thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:33,265 | INFO     | [job] queue monitor thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:35,391 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 23:43:42] 2024-05-17 06:43:36,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258441316160)>', '<ExcThread(monitor, started 140257718691584)>']
[2024-05-16 23:43:42] 2024-05-17 06:43:37,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 23:43:42] 2024-05-17 06:43:37,053 | INFO     | [monitor] control thread has ended
[2024-05-16 23:43:42] 2024-05-17 06:43:41,585 | INFO     | all workflow threads have been joined
[2024-05-16 23:43:42] 2024-05-17 06:43:41,585 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 23:43:42] 2024-05-17 06:43:41,586 | INFO     | traces error code: 0
[2024-05-16 23:43:42] 2024-05-17 06:43:41,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 23:43:42] 2024-05-17 06:43:41,722 [wrapper] ==== pilot stdout END ====
[2024-05-16 23:43:42] 2024-05-17 06:43:41,726 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 23:43:42] 2024-05-17 06:43:41,730 [wrapper] pilotpid: 36800
[2024-05-16 23:43:42] 2024-05-17 06:43:41,734 [wrapper] Pilot exit status: 0
[2024-05-16 23:43:42] 2024-05-17 06:43:41,745 [wrapper] pandaids: 6205822559
[2024-05-16 23:43:42] 2024-05-17 06:43:41,840 [wrapper] cleanup: SIGTERM to supervisor_pilot  33154 36801
[2024-05-16 23:43:42] 2024-05-17 06:43:41,843 [wrapper] Test setup, not cleaning
[2024-05-16 23:43:42] 2024-05-17 06:43:41,846 [wrapper] ==== wrapper stdout END ====
[2024-05-16 23:43:42] 2024-05-17 06:43:41,849 [wrapper] ==== wrapper stderr END ====
[2024-05-16 23:43:42] 2024-05-17 06:43:41,857 [wrapper] apfmon messages muted
[2024-05-16 23:43:42]  *** Error codes and diagnostics ***
[2024-05-16 23:43:42]     "exeErrorCode": 0,
[2024-05-16 23:43:42]     "exeErrorDiag": "",
[2024-05-16 23:43:42]     "pilotErrorCode": 0,
[2024-05-16 23:43:42]     "pilotErrorDiag": "",
[2024-05-16 23:43:42]  *** Listing of results directory ***
[2024-05-16 23:43:42] total 891244
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc    467845 May 13 01:14 pilot3.tar.gz
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc      5633 May 13 01:16 queuedata.json
[2024-05-16 23:43:42] -rwx------ 1 boinc boinc     32251 May 13 01:17 runpilot2-wrapper.sh
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc       100 May 16 05:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 23:43:42] -rwxr-xr-x 1 boinc boinc      7986 May 16 05:09 run_atlas
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc       105 May 16 05:09 job.xml
[2024-05-16 23:43:42] -rw-r--r-- 2 boinc boinc 615185285 May 16 05:09 EVNT.38776140._000111.pool.root.1
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc      6622 May 16 05:09 init_data.xml
[2024-05-16 23:43:42] drwxrwx--x 2 boinc boinc      4096 May 16 05:09 shared
[2024-05-16 23:43:42] -rw-r--r-- 2 boinc boinc    479993 May 16 05:09 input.tar.gz
[2024-05-16 23:43:42] -rw-r--r-- 2 boinc boinc     17537 May 16 05:09 start_atlas.sh
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc         0 May 16 05:09 boinc_lockfile
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc      2613 May 16 05:09 pandaJob.out
[2024-05-16 23:43:42] -rw------- 1 boinc boinc       424 May 16 05:09 setup.sh.local
[2024-05-16 23:43:42] -rw------- 1 boinc boinc   1010319 May 16 05:11 agis_schedconf.cvmfs.json
[2024-05-16 23:43:42] -rw------- 1 boinc boinc   1324701 May 16 05:12 cric_ddmendpoints.json
[2024-05-16 23:43:42] drwx------ 4 boinc boinc      4096 May 16 05:12 pilot3
[2024-05-16 23:43:42] -rw------- 1 boinc boinc 274522818 May 16 23:42 HITS.38776146._002769.pool.root.1
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc       532 May 16 23:42 boinc_task_state.xml
[2024-05-16 23:43:42] -rw------- 1 boinc boinc        95 May 16 23:42 pilot_heartbeat.json
[2024-05-16 23:43:42] -rw------- 1 boinc boinc      1073 May 16 23:43 memory_monitor_summary.json
[2024-05-16 23:43:42] -rw------- 1 boinc boinc         0 May 16 23:43 agis_ddmendpoints.agis.ALL.json
[2024-05-16 23:43:42] -rw------- 1 boinc boinc    984316 May 16 23:43 log.38776146._002769.job.log.tgz.1
[2024-05-16 23:43:42] -rw------- 1 boinc boinc      7797 May 16 23:43 heartbeat.json
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc      8192 May 16 23:43 boinc_mmap_file
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc        28 May 16 23:43 wrapper_checkpoint.txt
[2024-05-16 23:43:42] -rw------- 1 boinc boinc      4210 May 16 23:43 pilotlog.txt
[2024-05-16 23:43:42] -rw------- 1 boinc boinc   8714467 May 16 23:43 log.38776146._002769.job.log.1
[2024-05-16 23:43:42] -rw------- 1 boinc boinc       357 May 16 23:43 output.list
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc       620 May 16 23:43 runtime_log
[2024-05-16 23:43:42] -rw------- 1 boinc boinc   9717760 May 16 23:43 result.tar.gz
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc     11287 May 16 23:43 runtime_log.err
[2024-05-16 23:43:42] -rw------- 1 boinc boinc       659 May 16 23:43 GI1NDmP3fQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDm8xJKDmfp1uQm.diag
[2024-05-16 23:43:42] -rw-r--r-- 1 boinc boinc     21966 May 16 23:43 stderr.txt
[2024-05-16 23:43:42] HITS file was successfully produced:
[2024-05-16 23:43:42] -rw------- 1 boinc boinc 274522818 May 16 23:42 shared/HITS.pool.root.1
[2024-05-16 23:43:42]  *** Contents of shared directory: ***
[2024-05-16 23:43:42] total 878852
[2024-05-16 23:43:42] -rw-r--r-- 2 boinc boinc 615185285 May 16 05:09 ATLAS.root_0
[2024-05-16 23:43:42] -rw-r--r-- 2 boinc boinc    479993 May 16 05:09 input.tar.gz
[2024-05-16 23:43:42] -rw-r--r-- 2 boinc boinc     17537 May 16 05:09 start_atlas.sh
[2024-05-16 23:43:42] -rw------- 1 boinc boinc 274522818 May 16 23:42 HITS.pool.root.1
[2024-05-16 23:43:42] -rw------- 1 boinc boinc   9717760 May 16 23:43 result.tar.gz
23:43:43 (25839): run_atlas exited; CPU time 58241.690270
23:43:43 (25839): called boinc_finish(0)

</stderr_txt>
]]>

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