Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:28:43 (761819): wrapper (7.7.26015): starting
14:28:43 (761819): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 14:28:43] Arguments: --nthreads 4
[2024-05-17 14:28:43] Threads: 4
[2024-05-17 14:28:43] Checking for CVMFS
[2024-05-17 14:28:43] No cvmfs_config command found, will try listing directly
[2024-05-17 14:28:43] CVMFS is ok
[2024-05-17 14:28:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 14:28:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 14:28:43] Further information can be found at the LHC@home message board.
[2024-05-17 14:28:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 14:28:43] Checking for apptainer binary...
[2024-05-17 14:28:43] which: no apptainer in ((null))
[2024-05-17 14:28:43] apptainer is not installed, using version from CVMFS
[2024-05-17 14:28:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 14:28:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-05-17 14:28:45] apptainer works
[2024-05-17 14:28:45] Set ATHENA_PROC_NUMBER=4
[2024-05-17 14:28:45] Set ATHENA_CORE_NUMBER=4
[2024-05-17 14:28:45] Starting ATLAS job with PandaID=6205724091
[2024-05-17 14:28:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 17:41:50]  *** The last 200 lines of the pilot log: ***
[2024-05-17 17:41:50] 2024-05-17 15:40:30,289 | INFO     | -- intersect: -55077097789.83957
[2024-05-17 17:41:50] 2024-05-17 15:40:30,289 | INFO     | intersect: -55077097789.83957
[2024-05-17 17:41:50] 2024-05-17 15:40:30,289 | INFO     | chi2: 3.983186169188183
[2024-05-17 17:41:50] 2024-05-17 15:40:30,289 | INFO     | model: linear, x: [1715948957.0, 1715949018.0, 1715949079.0, 1715949140.0, 1715949201.0, 1715949262.0, 1715949323.0, 1715949384.0, 1715949445.0, 1715949506.0, 1715
[2024-05-17 17:41:50] 2024-05-17 15:40:30,289 | INFO     | sum of square deviations: 1900284932.0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | sum of deviations: 64281914618.99999
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | mean x: 1715954508.0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | mean y: 2285630.349726776
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | -- intersect: -58044189040.82035
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | intersect: -58044189040.82035
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | chi2: 3.9867521312806935
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | current chi2=3.9867521312806935 (change=-0.08952536841222691 %)
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | right removable region: 182
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | model: linear, x: [1715949262.0, 1715949323.0, 1715949384.0, 1715949445.0, 1715949506.0, 1715949567.0, 1715949628.0, 1715949689.0, 1715949750.0, 1715949811.0, 1715
[2024-05-17 17:41:50] 2024-05-17 15:40:30,290 | INFO     | sum of square deviations: 1900284932.0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,291 | INFO     | sum of deviations: 23543640215.000008
[2024-05-17 17:41:50] 2024-05-17 15:40:30,291 | INFO     | mean x: 1715954813.0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,291 | INFO     | mean y: 2327844.1967213117
[2024-05-17 17:41:50] 2024-05-17 15:40:30,291 | INFO     | -- intersect: -21257548536.525757
[2024-05-17 17:41:50] 2024-05-17 15:40:30,291 | INFO     | intersect: -21257548536.525757
[2024-05-17 17:41:50] 2024-05-17 15:40:30,291 | INFO     | chi2: 1.507078531473438
[2024-05-17 17:41:50] 2024-05-17 15:40:30,291 | INFO     | current chi2=1.507078531473438 (change=62.16399466509001 %)
[2024-05-17 17:41:50] 2024-05-17 15:40:30,292 | INFO     | model: linear, x: [1715949567.0, 1715949628.0, 1715949689.0, 1715949750.0, 1715949811.0, 1715949872.0, 1715949933.0, 1715949994.0, 1715950055.0, 1715950116.0, 1715
[2024-05-17 17:41:50] 2024-05-17 15:40:30,292 | INFO     | sum of square deviations: 1748737904.5
[2024-05-17 17:41:50] 2024-05-17 15:40:30,292 | INFO     | sum of deviations: -10188657552.999998
[2024-05-17 17:41:50] 2024-05-17 15:40:30,292 | INFO     | mean x: 1715954965.5
[2024-05-17 17:41:50] 2024-05-17 15:40:30,292 | INFO     | mean y: 2361793.0674157306
[2024-05-17 17:41:50] 2024-05-17 15:40:30,292 | INFO     | -- intersect: 10000016372.89895
[2024-05-17 17:41:50] 2024-05-17 15:40:30,292 | INFO     | intersect: 10000016372.89895
[2024-05-17 17:41:50] 2024-05-17 15:40:30,293 | INFO     | chi2: 0.07804231218936548
[2024-05-17 17:41:50] 2024-05-17 15:40:30,293 | INFO     | current chi2=0.07804231218936548 (change=94.8216160897027 %)
[2024-05-17 17:41:50] 2024-05-17 15:40:30,293 | INFO     | model: linear, x: [1715949872.0, 1715949933.0, 1715949994.0, 1715950055.0, 1715950116.0, 1715950177.0, 1715950238.0, 1715950299.0, 1715950360.0, 1715950421.0, 1715
[2024-05-17 17:41:50] 2024-05-17 15:40:30,293 | INFO     | sum of square deviations: 1605470102.0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,293 | INFO     | sum of deviations: -12448544866.000011
[2024-05-17 17:41:50] 2024-05-17 15:40:30,294 | INFO     | mean x: 1715955118.0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,294 | INFO     | mean y: 2364124.7919075144
[2024-05-17 17:41:50] 2024-05-17 15:40:30,294 | INFO     | -- intersect: 13307591203.050724
[2024-05-17 17:41:50] 2024-05-17 15:40:30,294 | INFO     | intersect: 13307591203.050724
[2024-05-17 17:41:50] 2024-05-17 15:40:30,294 | INFO     | chi2: 0.03538095962460201
[2024-05-17 17:41:50] 2024-05-17 15:40:30,294 | INFO     | current chi2=0.03538095962460201 (change=54.66438828881439 %)
[2024-05-17 17:41:50] 2024-05-17 15:40:30,294 | INFO     | model: linear, x: [1715950177.0, 1715950238.0, 1715950299.0, 1715950360.0, 1715950421.0, 1715950482.0, 1715950543.0, 1715950604.0, 1715950665.0, 1715950726.0, 1715
[2024-05-17 17:41:50] 2024-05-17 15:40:30,294 | INFO     | sum of square deviations: 1470248962.0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | sum of deviations: -10223884229.499998
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | mean x: 1715955270.5
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | mean y: 2361609.4226190476
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | -- intersect: 11934849563.52216
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | intersect: 11934849563.52216
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | chi2: 0.03332452403402276
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | current chi2=0.03332452403402276 (change=5.812266293504713 %)
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | left removable region: 40
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | model: linear, x: [1715951397.0, 1715951458.0, 1715951519.0, 1715951580.0, 1715951641.0, 1715951702.0, 1715951763.0, 1715951824.0, 1715951885.0, 1715951946.0, 1715
[2024-05-17 17:41:50] 2024-05-17 15:40:30,295 | INFO     | sum of square deviations: 887813855.5
[2024-05-17 17:41:50] 2024-05-17 15:40:30,296 | INFO     | sum of deviations: -519909130.5000002
[2024-05-17 17:41:50] 2024-05-17 15:40:30,296 | INFO     | mean x: 1715955697.5
[2024-05-17 17:41:50] 2024-05-17 15:40:30,296 | INFO     | mean y: 2348712.2887323946
[2024-05-17 17:41:50] 2024-05-17 15:40:30,296 | INFO     | -- intersect: 1007222683.489947
[2024-05-17 17:41:50] 2024-05-17 15:40:30,296 | INFO     | intersect: 1007222683.489947
[2024-05-17 17:41:50] 2024-05-17 15:40:30,296 | INFO     | chi2: 0.008988222763441354
[2024-05-17 17:41:50] 2024-05-17 15:40:30,296 | INFO     | -- intersect: 1007222683.489947
[2024-05-17 17:41:50] 2024-05-17 15:40:30,296 | INFO     | current memory leak: -0.59 B/s (using 142 data points, chi2=0.01)
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | ..............................
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | . Timing measurements:
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | . get job = 0 s
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | . initial setup = 2 s
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | . payload setup = 4 s
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | . stage-in = 0 s
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | . payload execution = 11465 s
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | . stage-out = 0 s
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | . log creation = 0 s
[2024-05-17 17:41:50] 2024-05-17 15:40:30,297 | INFO     | ..............................
[2024-05-17 17:41:50] 2024-05-17 15:40:30,351 | INFO     | 
[2024-05-17 17:41:50] 2024-05-17 15:40:30,351 | INFO     | job summary report
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | --------------------------------------------------
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | PanDA job id: 6205724091
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | task id: 38776125
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | errors: (none)
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | pilot state: finished 
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | transexitcode: 0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | exeerrorcode: 0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | exeerrordiag: 
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | exitcode: 0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | exitmsg: OK
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | cpuconsumptiontime: 43218 s
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | nevents: 400
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | neventsw: 0
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | pid: 773251
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | pgrp: 773251
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | corecount: 4
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | event service: False
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | sizes: {0: 2392207, 4: 2392413, 11: 2392441, 11473: 2421714, 11474: 2421713, 11476: 2430751, 11477: 2430935, 11482: 2431105}
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | --------------------------------------------------
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | 
[2024-05-17 17:41:50] 2024-05-17 15:40:30,352 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-05-17 17:41:50] 2024-05-17 15:40:30,372 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,372 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,372 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,372 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | job 6205724091 has completed (purged errors)
[2024-05-17 17:41:50] 2024-05-17 15:40:30,373 | INFO     | overall cleanup function is called
[2024-05-17 17:41:50] 2024-05-17 15:40:31,380 | INFO     | --- collectZombieJob: --- 10, [773251]
[2024-05-17 17:41:50] 2024-05-17 15:40:31,380 | INFO     | zombie collector waiting for pid 773251
[2024-05-17 17:41:50] 2024-05-17 15:40:31,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 17:41:50] 2024-05-17 15:40:32,386 | INFO     | collected zombie processes
[2024-05-17 17:41:50] 2024-05-17 15:40:32,386 | INFO     | will now attempt to kill all subprocesses of pid=773251
[2024-05-17 17:41:50] 2024-05-17 15:40:32,585 | INFO     | process IDs to be killed: [773251] (in reverse order)
[2024-05-17 17:41:50] 2024-05-17 15:40:32,726 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 17:41:50] 2024-05-17 15:40:32,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 17:41:50] 2024-05-17 15:40:32,738 | INFO     | did not find any defunct processes belonging to 773251
[2024-05-17 17:41:50] 2024-05-17 15:40:32,749 | INFO     | did not find any defunct processes belonging to 773251
[2024-05-17 17:41:50] 2024-05-17 15:40:32,750 | INFO     | ready for new job
[2024-05-17 17:41:50] 2024-05-17 15:40:32,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 17:41:50] 2024-05-17 15:40:32,751 | INFO     | *************************************
[2024-05-17 17:41:50] 2024-05-17 15:40:32,751 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 17:41:50] 2024-05-17 15:40:32,752 | INFO     | *************************************
[2024-05-17 17:41:50] 2024-05-17 15:40:32,752 | INFO     | 
[2024-05-17 17:41:50] 2024-05-17 15:40:32,754 | INFO     | architecture information:
[2024-05-17 17:41:50] 2024-05-17 15:40:32,754 | INFO     | executing command: cat /etc/os-release
[2024-05-17 17:41:50] 2024-05-17 15:40:32,771 | INFO     | cat /etc/os-release:
[2024-05-17 17:41:50] NAME="CentOS Linux"
[2024-05-17 17:41:50] VERSION="7 (Core)"
[2024-05-17 17:41:50] ID="centos"
[2024-05-17 17:41:50] ID_LIKE="rhel fedora"
[2024-05-17 17:41:50] VERSION_ID="7"
[2024-05-17 17:41:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 17:41:50] ANSI_COLOR="0;31"
[2024-05-17 17:41:50] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 17:41:50] HOME_URL="https://www.centos.org/"
[2024-05-17 17:41:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 17:41:50] 
[2024-05-17 17:41:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 17:41:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 17:41:50] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 17:41:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 17:41:50] 
[2024-05-17 17:41:50] 2024-05-17 15:40:32,772 | INFO     | *************************************
[2024-05-17 17:41:50] 2024-05-17 15:40:33,275 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-05-17 17:41:50] 2024-05-17 15:40:33,296 | INFO     | sufficient remaining disk space (553422684160 B)
[2024-05-17 17:41:50] 2024-05-17 15:40:33,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 17:41:50] 2024-05-17 15:40:33,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 17:41:50] 2024-05-17 15:40:33,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:41:50] 2024-05-17 15:40:33,297 | INFO     | aborting loop
[2024-05-17 17:41:50] 2024-05-17 15:40:33,723 | INFO     | all payload control threads have been joined
[2024-05-17 17:41:50] 2024-05-17 15:40:33,949 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 17:41:50] 2024-05-17 15:40:33,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 17:41:50] 2024-05-17 15:40:33,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 17:41:50] 2024-05-17 15:40:34,097 | INFO     | all data control threads have been joined
[2024-05-17 17:41:50] 2024-05-17 15:40:34,301 | INFO     | [job] retrieve thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:34,302 | INFO     | [job] job monitor thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:34,402 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:34,541 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 17:41:50] 2024-05-17 15:40:34,728 | INFO     | [payload] control thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:34,931 | INFO     | all job control threads have been joined
[2024-05-17 17:41:50] 2024-05-17 15:40:34,968 | INFO     | [job] validate thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:35,103 | INFO     | [data] control thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:35,156 | INFO     | [data] copytool_in thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:35,233 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:35,353 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:35,354 | INFO     | [payload] failed_post thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:35,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:41:50] 2024-05-17 15:40:35,478 | INFO     | [payload] validate_post thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:35,536 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:35,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 17:41:50] 2024-05-17 15:40:35,936 | INFO     | [job] control thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:36,366 | INFO     | [job] queue monitor thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:36,546 | INFO     | [data] copytool_out thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:39,564 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 17:41:50] 2024-05-17 15:40:40,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47726063727680)>', '<ExcThread(monitor, started 47726243383040)>']
[2024-05-17 17:41:50] 2024-05-17 15:40:40,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 17:41:50] 2024-05-17 15:40:40,979 | INFO     | [monitor] control thread has ended
[2024-05-17 17:41:50] 2024-05-17 15:40:45,255 | INFO     | all workflow threads have been joined
[2024-05-17 17:41:50] 2024-05-17 15:40:45,255 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 17:41:50] 2024-05-17 15:40:45,255 | INFO     | traces error code: 0
[2024-05-17 17:41:50] 2024-05-17 15:40:45,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 17:41:50] 2024-05-17 15:40:45,351 [wrapper] ==== pilot stdout END ====
[2024-05-17 17:41:50] 2024-05-17 15:40:45,353 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 17:41:50] 2024-05-17 15:40:45,356 [wrapper] pilotpid: 766120
[2024-05-17 17:41:50] 2024-05-17 15:40:45,358 [wrapper] Pilot exit status: 0
[2024-05-17 17:41:50] 2024-05-17 15:40:45,366 [wrapper] pandaids: 6205724091
[2024-05-17 17:41:50] 2024-05-17 15:40:45,455 [wrapper] cleanup: SIGTERM to supervisor_pilot 1183579 766121
[2024-05-17 17:41:50] 2024-05-17 15:40:45,457 [wrapper] Test setup, not cleaning
[2024-05-17 17:41:50] 2024-05-17 15:40:45,458 [wrapper] ==== wrapper stdout END ====
[2024-05-17 17:41:50] 2024-05-17 15:40:45,460 [wrapper] ==== wrapper stderr END ====
[2024-05-17 17:41:50] 2024-05-17 15:40:45,464 [wrapper] apfmon messages muted
[2024-05-17 17:41:50]  *** Error codes and diagnostics ***
[2024-05-17 17:41:50]     "exeErrorCode": 0,
[2024-05-17 17:41:50]     "exeErrorDiag": "",
[2024-05-17 17:41:50]     "pilotErrorCode": 0,
[2024-05-17 17:41:50]     "pilotErrorDiag": "",
[2024-05-17 17:41:50]  *** Listing of results directory ***
[2024-05-17 17:41:50] total 837432
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc    467845 May 13 09:46 pilot3.tar.gz
[2024-05-17 17:41:50] -rwx------ 1 boinc boinc     32251 May 13 10:09 runpilot2-wrapper.sh
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc      5633 May 13 10:09 queuedata.json
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc       100 May 17 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 17:41:50] -rwxr-xr-x 1 boinc boinc      7986 May 17 14:28 run_atlas
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc       105 May 17 14:28 job.xml
[2024-05-17 17:41:50] -rw-r--r-- 2 boinc boinc 600449343 May 17 14:28 EVNT.38776119._000036.pool.root.1
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc      6663 May 17 14:28 init_data.xml
[2024-05-17 17:41:50] -rw-r--r-- 2 boinc boinc     17537 May 17 14:28 start_atlas.sh
[2024-05-17 17:41:50] drwxrwx--x 2 boinc boinc      4096 May 17 14:28 shared
[2024-05-17 17:41:50] -rw-r--r-- 2 boinc boinc    479997 May 17 14:28 input.tar.gz
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc         0 May 17 14:28 boinc_lockfile
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc      2638 May 17 14:28 pandaJob.out
[2024-05-17 17:41:50] -rw------- 1 boinc boinc       424 May 17 14:28 setup.sh.local
[2024-05-17 17:41:50] -rw------- 1 boinc boinc   1019370 May 17 14:28 agis_schedconf.cvmfs.json
[2024-05-17 17:41:50] -rw------- 1 boinc boinc   1324701 May 17 14:28 cric_ddmendpoints.json
[2024-05-17 17:41:50] drwx------ 4 boinc boinc      4096 May 17 14:28 pilot3
[2024-05-17 17:41:50] -rw------- 1 boinc boinc 250451031 May 17 17:39 HITS.38776125._000627.pool.root.1
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc       531 May 17 17:40 boinc_task_state.xml
[2024-05-17 17:41:50] -rw------- 1 boinc boinc      1048 May 17 17:40 memory_monitor_summary.json
[2024-05-17 17:41:50] -rw------- 1 boinc boinc        95 May 17 17:40 pilot_heartbeat.json
[2024-05-17 17:41:50] -rw------- 1 boinc boinc         0 May 17 17:40 agis_ddmendpoints.agis.ALL.json
[2024-05-17 17:41:50] -rw------- 1 boinc boinc    330471 May 17 17:40 log.38776125._000627.job.log.tgz.1
[2024-05-17 17:41:50] -rw------- 1 boinc boinc      7761 May 17 17:40 heartbeat.json
[2024-05-17 17:41:50] -rw------- 1 boinc boinc      4221 May 17 17:40 pilotlog.txt
[2024-05-17 17:41:50] -rw------- 1 boinc boinc   1215882 May 17 17:40 log.38776125._000627.job.log.1
[2024-05-17 17:41:50] -rw------- 1 boinc boinc       357 May 17 17:40 output.list
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc       620 May 17 17:40 runtime_log
[2024-05-17 17:41:50] -rw------- 1 boinc boinc   1566720 May 17 17:40 result.tar.gz
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc     11410 May 17 17:40 runtime_log.err
[2024-05-17 17:41:50] -rw------- 1 boinc boinc       657 May 17 17:40 UrgKDmEvfQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIfGKDmoliarm.diag
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc        27 May 17 17:41 wrapper_checkpoint.txt
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc      8192 May 17 17:41 boinc_mmap_file
[2024-05-17 17:41:50] -rw-r--r-- 1 boinc boinc     21307 May 17 17:41 stderr.txt
[2024-05-17 17:41:50] HITS file was successfully produced:
[2024-05-17 17:41:50] -rw------- 1 boinc boinc 250451031 May 17 17:39 shared/HITS.pool.root.1
[2024-05-17 17:41:50]  *** Contents of shared directory: ***
[2024-05-17 17:41:50] total 832996
[2024-05-17 17:41:50] -rw-r--r-- 2 boinc boinc 600449343 May 17 14:28 ATLAS.root_0
[2024-05-17 17:41:50] -rw-r--r-- 2 boinc boinc     17537 May 17 14:28 start_atlas.sh
[2024-05-17 17:41:50] -rw-r--r-- 2 boinc boinc    479997 May 17 14:28 input.tar.gz
[2024-05-17 17:41:50] -rw------- 1 boinc boinc 250451031 May 17 17:39 HITS.pool.root.1
[2024-05-17 17:41:50] -rw------- 1 boinc boinc   1566720 May 17 17:40 result.tar.gz
17:41:52 (761819): run_atlas exited; CPU time 42969.658137
17:41:52 (761819): called boinc_finish(0)

</stderr_txt>
]]>

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