| Name | UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm_0 |
| Workunit | 222969288 |
| Created | 13 May 2024, 7:55:42 UTC |
| Sent | 13 May 2024, 9:34:44 UTC |
| Report deadline | 21 May 2024, 9:34:44 UTC |
| Received | 23 May 2024, 17:41:03 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 195 (0x000000C3) EXIT_CHILD_FAILED |
| Computer ID | 10690555 |
| Run time | 1 hours 11 min 47 sec |
| CPU time | 3 hours 28 min 27 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 11.36 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.39 GB |
| Peak swap size | 35.51 GB |
| Peak disk usage | 2.29 GB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
01:15:31 (639818): wrapper (7.7.26015): starting
01:15:31 (639818): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 01:15:31] Arguments: --nthreads 4
[2024-05-20 01:15:31] Threads: 4
[2024-05-20 01:15:31] Checking for CVMFS
[2024-05-20 01:15:31] No cvmfs_config command found, will try listing directly
[2024-05-20 01:15:31] CVMFS is ok
[2024-05-20 01:15:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 01:15:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 01:15:31] Further information can be found at the LHC@home message board.
[2024-05-20 01:15:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 01:15:31] Checking for apptainer binary...
[2024-05-20 01:15:31] which: no apptainer in ((null))
[2024-05-20 01:15:31] apptainer is not installed, using version from CVMFS
[2024-05-20 01:15:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 01:15:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-20 01:15:32] apptainer works
[2024-05-20 01:15:32] Set ATHENA_PROC_NUMBER=4
[2024-05-20 01:15:32] Set ATHENA_CORE_NUMBER=4
[2024-05-20 01:15:32] Starting ATLAS job with PandaID=6205822206
[2024-05-20 01:15:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:04:41 (2572089): wrapper (7.7.26015): starting
13:04:41 (2572089): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 13:04:41] Arguments: --nthreads 4
[2024-05-20 13:04:41] Threads: 4
[2024-05-20 13:04:41] This job has been restarted, cleaning up previous attempt
[2024-05-20 13:04:41] Checking for CVMFS
[2024-05-20 13:04:41] No cvmfs_config command found, will try listing directly
[2024-05-20 13:04:41] CVMFS is ok
[2024-05-20 13:04:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 13:04:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 13:04:41] Further information can be found at the LHC@home message board.
[2024-05-20 13:04:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 13:04:41] Checking for apptainer binary...
[2024-05-20 13:04:41] which: no apptainer in ((null))
[2024-05-20 13:04:41] apptainer is not installed, using version from CVMFS
[2024-05-20 13:04:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 13:04:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-20 13:04:42] apptainer works
[2024-05-20 13:04:42] Set ATHENA_PROC_NUMBER=4
[2024-05-20 13:04:42] Set ATHENA_CORE_NUMBER=4
[2024-05-20 13:04:42] Starting ATLAS job with PandaID=6205822206
[2024-05-20 13:04:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 13:07:50] Job failed
[2024-05-20 13:07:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-20 13:07:50] ++ pwd
[2024-05-20 13:07:50] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot20/slots/1/
[2024-05-20 13:07:50] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot20/slots/1/
[2024-05-20 13:07:50] + mv ATLAS.root_0 EVNT.38776140._000100.pool.root.1
[2024-05-20 13:07:50] mv: 'ATLAS.root_0' and 'EVNT.38776140._000100.pool.root.1' are the same file
[2024-05-20 13:07:50] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-20 13:07:50] + umask 077
[2024-05-20 13:07:50] ++ date +%s
[2024-05-20 13:07:50] + ACCOUNTING_STARTTIME=1716203082
[2024-05-20 13:07:50] + echo 'Detecting resource accounting method available for the job.'
[2024-05-20 13:07:50] Detecting resource accounting method available for the job.
[2024-05-20 13:07:50] + JOB_ACCOUNTING=
[2024-05-20 13:07:50] + command -v arc-job-cgroup
[2024-05-20 13:07:50] + '[' -z '' ']'
[2024-05-20 13:07:50] + GNU_TIME=/usr/bin/time
[2024-05-20 13:07:50] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-20 13:07:50] Looking for /usr/bin/time tool for accounting measurements
[2024-05-20 13:07:50] + '[' '!' -z /usr/bin/time ']'
[2024-05-20 13:07:50] + /usr/bin/time --version
[2024-05-20 13:07:50] + echo 'GNU time found and will be used for job accounting.'
[2024-05-20 13:07:50] GNU time found and will be used for job accounting.
[2024-05-20 13:07:50] + JOB_ACCOUNTING=gnutime
[2024-05-20 13:07:50] + '[' -z gnutime ']'
[2024-05-20 13:07:50] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-20 13:07:50] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-20 13:07:50] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205822206.out
[2024-05-20 13:07:50] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205822206.out
[2024-05-20 13:07:50] + export PILOT_NOKILL=YES
[2024-05-20 13:07:50] + PILOT_NOKILL=YES
[2024-05-20 13:07:50] + export GRID_GLOBAL_JOBID=UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-20 13:07:50] + GRID_GLOBAL_JOBID=UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-20 13:07:50] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-20 13:07:50] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-20 13:07:50] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-20 13:07:50] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-20 13:07:50] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-20 13:07:50] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-20 13:07:50] ++ pwd
[2024-05-20 13:07:50] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot20/slots/1
[2024-05-20 13:07:50] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-20 13:07:50] ++ pwd
[2024-05-20 13:07:50] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot20/slots/1/log.38776146._002490.job.log.1
[2024-05-20 13:07:50] ++ pwd
[2024-05-20 13:07:50] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot20/slots/1/log.38776146._002490.job.log.1
[2024-05-20 13:07:50] ++ pwd
[2024-05-20 13:07:50] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot20/slots/1.diag
[2024-05-20 13:07:50] + '[' '!' -z '' ']'
[2024-05-20 13:07:50] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-20 13:07:50] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-20 13:07:50] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-20 13:07:50] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-20 13:07:50] + '[' '!' -z '' ']'
[2024-05-20 13:07:50] + '[' -z yes ']'
[2024-05-20 13:07:50] ++ pwd
[2024-05-20 13:07:50] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag
[2024-05-20 13:07:50] + runtimeenvironments=
[2024-05-20 13:07:50] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-20 13:07:50] + RTE_function_0 1
[2024-05-20 13:07:50] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 13:07:50] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 13:07:50] + export BOINC_APP=ATLAS
[2024-05-20 13:07:50] + BOINC_APP=ATLAS
[2024-05-20 13:07:50] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 13:07:50] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 13:07:50] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 13:07:50] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 13:07:50] + '[' -z 1 ']'
[2024-05-20 13:07:50] + '[' 1 == 1 ']'
[2024-05-20 13:07:50] + shift
[2024-05-20 13:07:50] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-20 13:07:50] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 13:07:50] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-20 13:07:50] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot20/slots/1/
[2024-05-20 13:07:50] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot20/slots/1/
[2024-05-20 13:07:50] + '[' -e /scratch/boinc/var/slot20/slots/1/init_data.xml ']'
[2024-05-20 13:07:50] + grep '<use_http_proxy/>' /scratch/boinc/var/slot20/slots/1/init_data.xml
[2024-05-20 13:07:50] + '[' -e /scratch/boinc/var/slot20/slots/1/init_data.xml ']'
[2024-05-20 13:07:50] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot20/slots/1/init_data.xml
[2024-05-20 13:07:50] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-20 13:07:50] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 13:07:50] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-20 13:07:50] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 13:07:50] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 13:07:50] + '[' 0 -ne 0 ']'
[2024-05-20 13:07:50] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-20 13:07:50] + '[' -f /etc/os-release ']'
[2024-05-20 13:07:50] +++ cat /etc/os-release
[2024-05-20 13:07:50] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-20 13:07:50] +++ NAME='CentOS Linux'
[2024-05-20 13:07:50] +++ VERSION='7 (Core)'
[2024-05-20 13:07:50] +++ ID=centos
[2024-05-20 13:07:50] +++ ID_LIKE='rhel fedora'
[2024-05-20 13:07:50] +++ VERSION_ID=7
[2024-05-20 13:07:50] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-20 13:07:50] +++ ANSI_COLOR='0;31'
[2024-05-20 13:07:50] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-20 13:07:50] +++ HOME_URL=https://www.centos.org/
[2024-05-20 13:07:50] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-20 13:07:50] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-20 13:07:50] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-20 13:07:50] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-20 13:07:50] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-20 13:07:50] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-20 13:07:50] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-20 13:07:50] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-20 13:07:50] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-20 13:07:50] + HOME=/scratch/boinc/var/slot20/slots/1
[2024-05-20 13:07:50] + export HOME
[2024-05-20 13:07:50] + cd /scratch/boinc/var/slot20/slots/1
[2024-05-20 13:07:50] + '[' '!' -z '' ']'
[2024-05-20 13:07:50] + '[' -z '' ']'
[2024-05-20 13:07:50] ++ /bin/hostname -f
[2024-05-20 13:07:50] + nodename=skurut04.grid.cesnet.cz
[2024-05-20 13:07:50] + echo nodename=skurut04.grid.cesnet.cz
[2024-05-20 13:07:50] + echo Processors=1
[2024-05-20 13:07:50] + echo Benchmark=HEPSPEC:1.0
[2024-05-20 13:07:50] + executable=./runpilot2-wrapper.sh
[2024-05-20 13:07:50] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-20 13:07:50] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-20 13:07:50] ++ head -n 1
[2024-05-20 13:07:50] ++ tr -d '\0'
[2024-05-20 13:07:50] + line1='#!/bin/bash'
[2024-05-20 13:07:50] ++ echo '#!/bin/bash'
[2024-05-20 13:07:50] ++ sed -n 's/^#! *//p'
[2024-05-20 13:07:50] + shebang=/bin/bash
[2024-05-20 13:07:50] ++ echo /bin/bash
[2024-05-20 13:07:50] ++ awk '{print $1}'
[2024-05-20 13:07:50] + interpreter=/bin/bash
[2024-05-20 13:07:50] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-20 13:07:50] + '[' x/bin/bash = x ']'
[2024-05-20 13:07:50] + type /bin/bash
[2024-05-20 13:07:50] + '[' xgnutime = xgnutime ']'
[2024-05-20 13:07:50] + /usr/bin/time -o /scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-20 13:07:50] + RESULT=2
[2024-05-20 13:07:50] + sed -i -e /nodename=/d /scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag
[2024-05-20 13:07:50] ++ grep domain_name init_data.xml
[2024-05-20 13:07:50] ++ awk -F '>' '{print $2}'
[2024-05-20 13:07:50] ++ awk -F '<' '{print $1}'
[2024-05-20 13:07:50] ++ sed -e 's# #_#g'
[2024-05-20 13:07:50] + hostname=skurut04.grid.cesnet.cz
[2024-05-20 13:07:50] ++ grep user_name init_data.xml
[2024-05-20 13:07:50] ++ awk -F '>' '{print $2}'
[2024-05-20 13:07:50] ++ awk -F '<' '{print $1}'
[2024-05-20 13:07:50] ++ sed -e 's# #_#g'
[2024-05-20 13:07:50] + username=praguelcg2
[2024-05-20 13:07:50] + nodename=praguelcg2@skurut04.grid.cesnet.cz
[2024-05-20 13:07:50] + echo nodename=praguelcg2@skurut04.grid.cesnet.cz
[2024-05-20 13:07:50] + '[' -n 4 ']'
[2024-05-20 13:07:50] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag
[2024-05-20 13:07:50] + echo exitcode=2
[2024-05-20 13:07:50] + runtimeenvironments=
[2024-05-20 13:07:50] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-20 13:07:50] + RTE_function_0 2
[2024-05-20 13:07:50] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 13:07:50] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 13:07:50] + export BOINC_APP=ATLAS
[2024-05-20 13:07:50] + BOINC_APP=ATLAS
[2024-05-20 13:07:50] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 13:07:50] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 13:07:50] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 13:07:50] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 13:07:50] + '[' -z 2 ']'
[2024-05-20 13:07:50] + '[' 2 == 1 ']'
[2024-05-20 13:07:50] + '[' 0 -ne 0 ']'
[2024-05-20 13:07:50] + echo 'zip all output files'
[2024-05-20 13:07:50] + flist='*.diag '
[2024-05-20 13:07:50] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 13:07:50] + '[' -e ./heartbeat.json ']'
[2024-05-20 13:07:50] + flist='*.diag ./heartbeat.json'
[2024-05-20 13:07:50] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 13:07:50] + '[' -e ./output.list ']'
[2024-05-20 13:07:50] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 13:07:50] + '[' -e ./log.38776146._002490.job.log.1 ']'
[2024-05-20 13:07:50] + flist='*.diag ./heartbeat.json ./log.38776146._002490.job.log.1'
[2024-05-20 13:07:50] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 13:07:50] + '[' -e ./log.38776146._002490.job.log.1 ']'
[2024-05-20 13:07:50] + flist='*.diag ./heartbeat.json ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1'
[2024-05-20 13:07:50] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 13:07:50] + '[' -e ./gmlog/ ']'
[2024-05-20 13:07:50] + '[' -f output.list ']'
[2024-05-20 13:07:50] + tar cvf result.tar.gz UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag ./heartbeat.json ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1
[2024-05-20 13:07:50] + '[' xgnutime = xcgroup ']'
[2024-05-20 13:07:50] + '[' -n '' ']'
[2024-05-20 13:07:50] + '[' -n '' ']'
[2024-05-20 13:07:50] ++ date +%s
[2024-05-20 13:07:50] + ACCOUNTING_ENDTIME=1716203269
[2024-05-20 13:07:50] ++ date -d '1970-01-01 UTC 1716203082 seconds' +%Y%m%d%H%M%SZ
[2024-05-20 13:07:50] + echo LRMSStartTime=20240520130442Z
[2024-05-20 13:07:50] ++ date -d '1970-01-01 UTC 1716203269 seconds' +%Y%m%d%H%M%SZ
[2024-05-20 13:07:50] + echo LRMSEndTime=20240520130749Z
[2024-05-20 13:07:50] + echo walltime=187
[2024-05-20 13:07:50] + echo exitcode=2
[2024-05-20 13:07:50] + exit 2
[2024-05-20 13:07:50] ./pilotlog.txt
[2024-05-20 13:07:50] ./log.38776146._002490.job.log.1
[2024-05-20 13:07:50] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-20 13:07:50] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-20 13:07:50] ./pilot3/pilot/util/loggingsupport.py
[2024-05-20 13:07:50] ./pilot3/pilot/util/realtimelogger.py
[2024-05-20 13:07:50] ./runtime_log.err
[2024-05-20 13:07:50] ./PanDA_Pilot-6205822206/pilotlog.txt
[2024-05-20 13:07:50] ./PanDA_Pilot-6205822206/PoolFileCatalog.xml
[2024-05-20 13:07:50] ./PanDA_Pilot-6205822206/prmon.log
[2024-05-20 13:07:50] ./PanDA_Pilot-6205822206/log.EVNTtoHITS
[2024-05-20 13:07:50] ./runtime_log
21:15:35 (3416666): wrapper (7.7.26015): starting
21:15:35 (3416666): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 21:15:35] Arguments: --nthreads 4
[2024-05-20 21:15:35] Threads: 4
[2024-05-20 21:15:35] This job has been restarted, cleaning up previous attempt
[2024-05-20 21:15:35] Checking for CVMFS
[2024-05-20 21:15:35] No cvmfs_config command found, will try listing directly
[2024-05-20 21:15:35] CVMFS is ok
[2024-05-20 21:15:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 21:15:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 21:15:35] Further information can be found at the LHC@home message board.
[2024-05-20 21:15:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 21:15:35] Checking for apptainer binary...
[2024-05-20 21:15:35] which: no apptainer in ((null))
[2024-05-20 21:15:35] apptainer is not installed, using version from CVMFS
[2024-05-20 21:15:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 21:15:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-20 21:15:35] apptainer works
[2024-05-20 21:15:35] Set ATHENA_PROC_NUMBER=4
[2024-05-20 21:15:35] Set ATHENA_CORE_NUMBER=4
[2024-05-20 21:15:35] Starting ATLAS job with PandaID=6205822206
[2024-05-20 21:15:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 21:18:46] Job failed
[2024-05-20 21:18:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-20 21:18:46] ++ pwd
[2024-05-20 21:18:46] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot20/slots/1/
[2024-05-20 21:18:46] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot20/slots/1/
[2024-05-20 21:18:46] + mv ATLAS.root_0 EVNT.38776140._000100.pool.root.1
[2024-05-20 21:18:46] mv: 'ATLAS.root_0' and 'EVNT.38776140._000100.pool.root.1' are the same file
[2024-05-20 21:18:46] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-20 21:18:46] + umask 077
[2024-05-20 21:18:46] ++ date +%s
[2024-05-20 21:18:46] + ACCOUNTING_STARTTIME=1716232536
[2024-05-20 21:18:46] + echo 'Detecting resource accounting method available for the job.'
[2024-05-20 21:18:46] Detecting resource accounting method available for the job.
[2024-05-20 21:18:46] + JOB_ACCOUNTING=
[2024-05-20 21:18:46] + command -v arc-job-cgroup
[2024-05-20 21:18:46] + '[' -z '' ']'
[2024-05-20 21:18:46] + GNU_TIME=/usr/bin/time
[2024-05-20 21:18:46] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-20 21:18:46] Looking for /usr/bin/time tool for accounting measurements
[2024-05-20 21:18:46] + '[' '!' -z /usr/bin/time ']'
[2024-05-20 21:18:46] + /usr/bin/time --version
[2024-05-20 21:18:46] + echo 'GNU time found and will be used for job accounting.'
[2024-05-20 21:18:46] GNU time found and will be used for job accounting.
[2024-05-20 21:18:46] + JOB_ACCOUNTING=gnutime
[2024-05-20 21:18:46] + '[' -z gnutime ']'
[2024-05-20 21:18:46] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-20 21:18:46] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-20 21:18:46] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205822206.out
[2024-05-20 21:18:46] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205822206.out
[2024-05-20 21:18:46] + export PILOT_NOKILL=YES
[2024-05-20 21:18:46] + PILOT_NOKILL=YES
[2024-05-20 21:18:46] + export GRID_GLOBAL_JOBID=UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-20 21:18:46] + GRID_GLOBAL_JOBID=UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-20 21:18:46] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-20 21:18:46] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-20 21:18:46] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-20 21:18:46] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-20 21:18:46] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-20 21:18:46] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-20 21:18:46] ++ pwd
[2024-05-20 21:18:46] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot20/slots/1
[2024-05-20 21:18:46] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-20 21:18:46] ++ pwd
[2024-05-20 21:18:46] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot20/slots/1/log.38776146._002490.job.log.1
[2024-05-20 21:18:46] ++ pwd
[2024-05-20 21:18:46] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot20/slots/1/log.38776146._002490.job.log.1
[2024-05-20 21:18:46] ++ pwd
[2024-05-20 21:18:46] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot20/slots/1.diag
[2024-05-20 21:18:46] + '[' '!' -z '' ']'
[2024-05-20 21:18:46] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-20 21:18:46] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-20 21:18:46] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-20 21:18:46] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-20 21:18:46] + '[' '!' -z '' ']'
[2024-05-20 21:18:46] + '[' -z yes ']'
[2024-05-20 21:18:46] ++ pwd
[2024-05-20 21:18:46] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag
[2024-05-20 21:18:46] + runtimeenvironments=
[2024-05-20 21:18:46] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-20 21:18:46] + RTE_function_0 1
[2024-05-20 21:18:46] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 21:18:46] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 21:18:46] + export BOINC_APP=ATLAS
[2024-05-20 21:18:46] + BOINC_APP=ATLAS
[2024-05-20 21:18:46] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 21:18:46] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 21:18:46] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 21:18:46] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 21:18:46] + '[' -z 1 ']'
[2024-05-20 21:18:46] + '[' 1 == 1 ']'
[2024-05-20 21:18:46] + shift
[2024-05-20 21:18:46] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-20 21:18:46] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 21:18:46] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-20 21:18:46] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot20/slots/1/
[2024-05-20 21:18:46] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot20/slots/1/
[2024-05-20 21:18:46] + '[' -e /scratch/boinc/var/slot20/slots/1/init_data.xml ']'
[2024-05-20 21:18:46] + grep '<use_http_proxy/>' /scratch/boinc/var/slot20/slots/1/init_data.xml
[2024-05-20 21:18:46] + '[' -e /scratch/boinc/var/slot20/slots/1/init_data.xml ']'
[2024-05-20 21:18:46] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot20/slots/1/init_data.xml
[2024-05-20 21:18:46] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-20 21:18:46] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 21:18:46] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-20 21:18:46] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 21:18:46] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 21:18:46] + '[' 0 -ne 0 ']'
[2024-05-20 21:18:46] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-20 21:18:46] + '[' -f /etc/os-release ']'
[2024-05-20 21:18:46] +++ cat /etc/os-release
[2024-05-20 21:18:46] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-20 21:18:46] +++ NAME='CentOS Linux'
[2024-05-20 21:18:46] +++ VERSION='7 (Core)'
[2024-05-20 21:18:46] +++ ID=centos
[2024-05-20 21:18:46] +++ ID_LIKE='rhel fedora'
[2024-05-20 21:18:46] +++ VERSION_ID=7
[2024-05-20 21:18:46] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-20 21:18:46] +++ ANSI_COLOR='0;31'
[2024-05-20 21:18:46] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-20 21:18:46] +++ HOME_URL=https://www.centos.org/
[2024-05-20 21:18:46] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-20 21:18:46] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-20 21:18:46] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-20 21:18:46] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-20 21:18:46] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-20 21:18:46] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-20 21:18:46] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-20 21:18:46] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-20 21:18:46] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-20 21:18:46] + HOME=/scratch/boinc/var/slot20/slots/1
[2024-05-20 21:18:46] + export HOME
[2024-05-20 21:18:46] + cd /scratch/boinc/var/slot20/slots/1
[2024-05-20 21:18:46] + '[' '!' -z '' ']'
[2024-05-20 21:18:46] + '[' -z '' ']'
[2024-05-20 21:18:46] ++ /bin/hostname -f
[2024-05-20 21:18:46] + nodename=skurut04.grid.cesnet.cz
[2024-05-20 21:18:46] + echo nodename=skurut04.grid.cesnet.cz
[2024-05-20 21:18:46] + echo Processors=1
[2024-05-20 21:18:46] + echo Benchmark=HEPSPEC:1.0
[2024-05-20 21:18:46] + executable=./runpilot2-wrapper.sh
[2024-05-20 21:18:46] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-20 21:18:46] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-20 21:18:46] ++ tr -d '\0'
[2024-05-20 21:18:46] ++ head -n 1
[2024-05-20 21:18:46] + line1='#!/bin/bash'
[2024-05-20 21:18:46] ++ echo '#!/bin/bash'
[2024-05-20 21:18:46] ++ sed -n 's/^#! *//p'
[2024-05-20 21:18:46] + shebang=/bin/bash
[2024-05-20 21:18:46] ++ echo /bin/bash
[2024-05-20 21:18:46] ++ awk '{print $1}'
[2024-05-20 21:18:46] + interpreter=/bin/bash
[2024-05-20 21:18:46] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-20 21:18:46] + '[' x/bin/bash = x ']'
[2024-05-20 21:18:46] + type /bin/bash
[2024-05-20 21:18:46] + '[' xgnutime = xgnutime ']'
[2024-05-20 21:18:46] + /usr/bin/time -o /scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-20 21:18:46] + RESULT=2
[2024-05-20 21:18:46] + sed -i -e /nodename=/d /scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag
[2024-05-20 21:18:46] ++ grep domain_name init_data.xml
[2024-05-20 21:18:46] ++ awk -F '<' '{print $1}'
[2024-05-20 21:18:46] ++ awk -F '>' '{print $2}'
[2024-05-20 21:18:46] ++ sed -e 's# #_#g'
[2024-05-20 21:18:46] + hostname=skurut04.grid.cesnet.cz
[2024-05-20 21:18:46] ++ grep user_name init_data.xml
[2024-05-20 21:18:46] ++ awk -F '>' '{print $2}'
[2024-05-20 21:18:46] ++ awk -F '<' '{print $1}'
[2024-05-20 21:18:46] ++ sed -e 's# #_#g'
[2024-05-20 21:18:46] + username=praguelcg2
[2024-05-20 21:18:46] + nodename=praguelcg2@skurut04.grid.cesnet.cz
[2024-05-20 21:18:46] + echo nodename=praguelcg2@skurut04.grid.cesnet.cz
[2024-05-20 21:18:46] + '[' -n 4 ']'
[2024-05-20 21:18:46] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag
[2024-05-20 21:18:46] + echo exitcode=2
[2024-05-20 21:18:46] + runtimeenvironments=
[2024-05-20 21:18:46] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-20 21:18:46] + RTE_function_0 2
[2024-05-20 21:18:46] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 21:18:46] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 21:18:46] + export BOINC_APP=ATLAS
[2024-05-20 21:18:46] + BOINC_APP=ATLAS
[2024-05-20 21:18:46] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 21:18:46] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 21:18:46] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 21:18:46] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 21:18:46] + '[' -z 2 ']'
[2024-05-20 21:18:46] + '[' 2 == 1 ']'
[2024-05-20 21:18:46] + '[' 0 -ne 0 ']'
[2024-05-20 21:18:46] + echo 'zip all output files'
[2024-05-20 21:18:46] + flist='*.diag '
[2024-05-20 21:18:46] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 21:18:46] + '[' -e ./heartbeat.json ']'
[2024-05-20 21:18:46] + flist='*.diag ./heartbeat.json'
[2024-05-20 21:18:46] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 21:18:46] + '[' -e ./output.list ']'
[2024-05-20 21:18:46] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 21:18:46] + '[' -e ./log.38776146._002490.job.log.1 ']'
[2024-05-20 21:18:46] + flist='*.diag ./heartbeat.json ./log.38776146._002490.job.log.1'
[2024-05-20 21:18:46] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 21:18:46] + '[' -e ./log.38776146._002490.job.log.1 ']'
[2024-05-20 21:18:46] + flist='*.diag ./heartbeat.json ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1'
[2024-05-20 21:18:46] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-20 21:18:46] + '[' -e ./gmlog/ ']'
[2024-05-20 21:18:46] + '[' -f output.list ']'
[2024-05-20 21:18:46] + tar cvf result.tar.gz UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag ./heartbeat.json ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1
[2024-05-20 21:18:46] + '[' xgnutime = xcgroup ']'
[2024-05-20 21:18:46] + '[' -n '' ']'
[2024-05-20 21:18:46] + '[' -n '' ']'
[2024-05-20 21:18:46] ++ date +%s
[2024-05-20 21:18:46] + ACCOUNTING_ENDTIME=1716232726
[2024-05-20 21:18:46] ++ date -d '1970-01-01 UTC 1716232536 seconds' +%Y%m%d%H%M%SZ
[2024-05-20 21:18:46] + echo LRMSStartTime=20240520211536Z
[2024-05-20 21:18:46] ++ date -d '1970-01-01 UTC 1716232726 seconds' +%Y%m%d%H%M%SZ
[2024-05-20 21:18:46] + echo LRMSEndTime=20240520211846Z
[2024-05-20 21:18:46] + echo walltime=190
[2024-05-20 21:18:46] + echo exitcode=2
[2024-05-20 21:18:46] + exit 2
[2024-05-20 21:18:46] ./pilotlog.txt
[2024-05-20 21:18:46] ./log.38776146._002490.job.log.1
[2024-05-20 21:18:46] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-20 21:18:46] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-20 21:18:46] ./pilot3/pilot/util/loggingsupport.py
[2024-05-20 21:18:46] ./pilot3/pilot/util/realtimelogger.py
[2024-05-20 21:18:46] ./runtime_log.err
[2024-05-20 21:18:46] ./PanDA_Pilot-6205822206/pilotlog.txt
[2024-05-20 21:18:46] ./PanDA_Pilot-6205822206/PoolFileCatalog.xml
[2024-05-20 21:18:46] ./PanDA_Pilot-6205822206/prmon.log
[2024-05-20 21:18:46] ./PanDA_Pilot-6205822206/log.EVNTtoHITS
[2024-05-20 21:18:46] ./runtime_log
19:52:07 (1681218): wrapper (7.7.26015): starting
19:52:07 (1681218): wrapper: running run_atlas (--nthreads 4)
[2024-05-21 19:52:07] Arguments: --nthreads 4
[2024-05-21 19:52:07] Threads: 4
[2024-05-21 19:52:07] This job has been restarted, cleaning up previous attempt
[2024-05-21 19:52:07] Checking for CVMFS
[2024-05-21 19:52:07] No cvmfs_config command found, will try listing directly
[2024-05-21 19:52:07] CVMFS is ok
[2024-05-21 19:52:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-21 19:52:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-21 19:52:07] Further information can be found at the LHC@home message board.
[2024-05-21 19:52:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-21 19:52:07] Checking for apptainer binary...
[2024-05-21 19:52:07] which: no apptainer in ((null))
[2024-05-21 19:52:07] apptainer is not installed, using version from CVMFS
[2024-05-21 19:52:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-21 19:52:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-21 19:52:09] apptainer works
[2024-05-21 19:52:09] Set ATHENA_PROC_NUMBER=4
[2024-05-21 19:52:09] Set ATHENA_CORE_NUMBER=4
[2024-05-21 19:52:09] Starting ATLAS job with PandaID=6205822206
[2024-05-21 19:52:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:50:39 (1196504): wrapper (7.7.26015): starting
12:50:39 (1196504): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 12:50:39] Arguments: --nthreads 4
[2024-05-23 12:50:39] Threads: 4
[2024-05-23 12:50:39] This job has been restarted, cleaning up previous attempt
[2024-05-23 12:50:39] Checking for CVMFS
[2024-05-23 12:50:39] No cvmfs_config command found, will try listing directly
[2024-05-23 12:50:39] CVMFS is ok
[2024-05-23 12:50:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 12:50:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 12:50:39] Further information can be found at the LHC@home message board.
[2024-05-23 12:50:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 12:50:39] Checking for apptainer binary...
[2024-05-23 12:50:39] which: no apptainer in ((null))
[2024-05-23 12:50:39] apptainer is not installed, using version from CVMFS
[2024-05-23 12:50:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 12:50:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-23 12:50:40] apptainer works
[2024-05-23 12:50:40] Set ATHENA_PROC_NUMBER=4
[2024-05-23 12:50:40] Set ATHENA_CORE_NUMBER=4
[2024-05-23 12:50:40] Starting ATLAS job with PandaID=6205822206
[2024-05-23 12:50:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:21:05 (1885368): wrapper (7.7.26015): starting
19:21:05 (1885368): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 19:21:05] Arguments: --nthreads 4
[2024-05-23 19:21:05] Threads: 4
[2024-05-23 19:21:05] This job has been restarted, cleaning up previous attempt
[2024-05-23 19:21:05] Checking for CVMFS
[2024-05-23 19:21:05] No cvmfs_config command found, will try listing directly
[2024-05-23 19:21:05] CVMFS is ok
[2024-05-23 19:21:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 19:21:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 19:21:05] Further information can be found at the LHC@home message board.
[2024-05-23 19:21:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 19:21:05] Checking for apptainer binary...
[2024-05-23 19:21:05] which: no apptainer in ((null))
[2024-05-23 19:21:05] apptainer is not installed, using version from CVMFS
[2024-05-23 19:21:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 19:21:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-23 19:21:06] apptainer works
[2024-05-23 19:21:06] Set ATHENA_PROC_NUMBER=4
[2024-05-23 19:21:06] Set ATHENA_CORE_NUMBER=4
[2024-05-23 19:21:06] Starting ATLAS job with PandaID=6205822206
[2024-05-23 19:21:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-23 19:26:37] Job failed
[2024-05-23 19:26:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-23 19:26:37] ++ pwd
[2024-05-23 19:26:37] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot20/slots/1/
[2024-05-23 19:26:37] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot20/slots/1/
[2024-05-23 19:26:37] + mv ATLAS.root_0 EVNT.38776140._000100.pool.root.1
[2024-05-23 19:26:37] mv: 'ATLAS.root_0' and 'EVNT.38776140._000100.pool.root.1' are the same file
[2024-05-23 19:26:37] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-23 19:26:37] + umask 077
[2024-05-23 19:26:37] ++ date +%s
[2024-05-23 19:26:37] + ACCOUNTING_STARTTIME=1716484867
[2024-05-23 19:26:37] + echo 'Detecting resource accounting method available for the job.'
[2024-05-23 19:26:37] Detecting resource accounting method available for the job.
[2024-05-23 19:26:37] + JOB_ACCOUNTING=
[2024-05-23 19:26:37] + command -v arc-job-cgroup
[2024-05-23 19:26:37] + '[' -z '' ']'
[2024-05-23 19:26:37] + GNU_TIME=/usr/bin/time
[2024-05-23 19:26:37] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-23 19:26:37] Looking for /usr/bin/time tool for accounting measurements
[2024-05-23 19:26:37] + '[' '!' -z /usr/bin/time ']'
[2024-05-23 19:26:37] + /usr/bin/time --version
[2024-05-23 19:26:37] + echo 'GNU time found and will be used for job accounting.'
[2024-05-23 19:26:37] GNU time found and will be used for job accounting.
[2024-05-23 19:26:37] + JOB_ACCOUNTING=gnutime
[2024-05-23 19:26:37] + '[' -z gnutime ']'
[2024-05-23 19:26:37] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-23 19:26:37] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-23 19:26:37] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205822206.out
[2024-05-23 19:26:37] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205822206.out
[2024-05-23 19:26:37] + export PILOT_NOKILL=YES
[2024-05-23 19:26:37] + PILOT_NOKILL=YES
[2024-05-23 19:26:37] + export GRID_GLOBAL_JOBID=UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-23 19:26:37] + GRID_GLOBAL_JOBID=UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-23 19:26:37] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-23 19:26:37] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm
[2024-05-23 19:26:37] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-23 19:26:37] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-23 19:26:37] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-23 19:26:37] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-23 19:26:37] ++ pwd
[2024-05-23 19:26:37] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot20/slots/1
[2024-05-23 19:26:37] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-23 19:26:37] ++ pwd
[2024-05-23 19:26:37] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot20/slots/1/log.38776146._002490.job.log.1
[2024-05-23 19:26:37] ++ pwd
[2024-05-23 19:26:37] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot20/slots/1/log.38776146._002490.job.log.1
[2024-05-23 19:26:37] ++ pwd
[2024-05-23 19:26:37] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot20/slots/1.diag
[2024-05-23 19:26:37] + '[' '!' -z '' ']'
[2024-05-23 19:26:37] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-23 19:26:37] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-23 19:26:37] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-23 19:26:37] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-23 19:26:37] + '[' '!' -z '' ']'
[2024-05-23 19:26:37] + '[' -z yes ']'
[2024-05-23 19:26:37] ++ pwd
[2024-05-23 19:26:37] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag
[2024-05-23 19:26:37] + runtimeenvironments=
[2024-05-23 19:26:37] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-23 19:26:37] + RTE_function_0 1
[2024-05-23 19:26:37] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-23 19:26:37] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-23 19:26:37] + export BOINC_APP=ATLAS
[2024-05-23 19:26:37] + BOINC_APP=ATLAS
[2024-05-23 19:26:37] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-23 19:26:37] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-23 19:26:37] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-23 19:26:37] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-23 19:26:37] + '[' -z 1 ']'
[2024-05-23 19:26:37] + '[' 1 == 1 ']'
[2024-05-23 19:26:37] + shift
[2024-05-23 19:26:37] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-23 19:26:37] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-23 19:26:37] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-23 19:26:37] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot20/slots/1/
[2024-05-23 19:26:37] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot20/slots/1/
[2024-05-23 19:26:37] + '[' -e /scratch/boinc/var/slot20/slots/1/init_data.xml ']'
[2024-05-23 19:26:37] + grep '<use_http_proxy/>' /scratch/boinc/var/slot20/slots/1/init_data.xml
[2024-05-23 19:26:37] + '[' -e /scratch/boinc/var/slot20/slots/1/init_data.xml ']'
[2024-05-23 19:26:37] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot20/slots/1/init_data.xml
[2024-05-23 19:26:37] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-23 19:26:37] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-23 19:26:37] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-23 19:26:37] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-23 19:26:37] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-23 19:26:37] + '[' 0 -ne 0 ']'
[2024-05-23 19:26:37] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-23 19:26:37] + '[' -f /etc/os-release ']'
[2024-05-23 19:26:37] +++ cat /etc/os-release
[2024-05-23 19:26:37] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-23 19:26:37] +++ NAME='CentOS Linux'
[2024-05-23 19:26:37] +++ VERSION='7 (Core)'
[2024-05-23 19:26:37] +++ ID=centos
[2024-05-23 19:26:37] +++ ID_LIKE='rhel fedora'
[2024-05-23 19:26:37] +++ VERSION_ID=7
[2024-05-23 19:26:37] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-23 19:26:37] +++ ANSI_COLOR='0;31'
[2024-05-23 19:26:37] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-23 19:26:37] +++ HOME_URL=https://www.centos.org/
[2024-05-23 19:26:37] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-23 19:26:37] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-23 19:26:37] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-23 19:26:37] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-23 19:26:37] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-23 19:26:37] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-23 19:26:37] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-23 19:26:37] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-23 19:26:37] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-23 19:26:37] + HOME=/scratch/boinc/var/slot20/slots/1
[2024-05-23 19:26:37] + export HOME
[2024-05-23 19:26:37] + cd /scratch/boinc/var/slot20/slots/1
[2024-05-23 19:26:37] + '[' '!' -z '' ']'
[2024-05-23 19:26:37] + '[' -z '' ']'
[2024-05-23 19:26:37] ++ /bin/hostname -f
[2024-05-23 19:26:37] + nodename=skurut04.grid.cesnet.cz
[2024-05-23 19:26:37] + echo nodename=skurut04.grid.cesnet.cz
[2024-05-23 19:26:37] + echo Processors=1
[2024-05-23 19:26:37] + echo Benchmark=HEPSPEC:1.0
[2024-05-23 19:26:37] + executable=./runpilot2-wrapper.sh
[2024-05-23 19:26:37] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-23 19:26:37] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-23 19:26:37] ++ head -n 1
[2024-05-23 19:26:37] ++ tr -d '\0'
[2024-05-23 19:26:37] + line1='#!/bin/bash'
[2024-05-23 19:26:37] ++ echo '#!/bin/bash'
[2024-05-23 19:26:37] ++ sed -n 's/^#! *//p'
[2024-05-23 19:26:37] + shebang=/bin/bash
[2024-05-23 19:26:37] ++ awk '{print $1}'
[2024-05-23 19:26:37] ++ echo /bin/bash
[2024-05-23 19:26:37] + interpreter=/bin/bash
[2024-05-23 19:26:37] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-23 19:26:37] + '[' x/bin/bash = x ']'
[2024-05-23 19:26:37] + type /bin/bash
[2024-05-23 19:26:37] + '[' xgnutime = xgnutime ']'
[2024-05-23 19:26:37] + /usr/bin/time -o /scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-23 19:26:37] + RESULT=2
[2024-05-23 19:26:37] + sed -i -e /nodename=/d /scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag
[2024-05-23 19:26:37] ++ grep domain_name init_data.xml
[2024-05-23 19:26:37] ++ awk -F '>' '{print $2}'
[2024-05-23 19:26:37] ++ sed -e 's# #_#g'
[2024-05-23 19:26:37] ++ awk -F '<' '{print $1}'
[2024-05-23 19:26:37] + hostname=skurut04.grid.cesnet.cz
[2024-05-23 19:26:37] ++ grep user_name init_data.xml
[2024-05-23 19:26:37] ++ awk -F '>' '{print $2}'
[2024-05-23 19:26:37] ++ awk -F '<' '{print $1}'
[2024-05-23 19:26:37] ++ sed -e 's# #_#g'
[2024-05-23 19:26:37] + username=praguelcg2
[2024-05-23 19:26:37] + nodename=praguelcg2@skurut04.grid.cesnet.cz
[2024-05-23 19:26:37] + echo nodename=praguelcg2@skurut04.grid.cesnet.cz
[2024-05-23 19:26:37] + '[' -n 4 ']'
[2024-05-23 19:26:37] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot20/slots/1/UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag
[2024-05-23 19:26:37] + echo exitcode=2
[2024-05-23 19:26:37] + runtimeenvironments=
[2024-05-23 19:26:37] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-23 19:26:37] + RTE_function_0 2
[2024-05-23 19:26:37] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-23 19:26:37] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-23 19:26:37] + export BOINC_APP=ATLAS
[2024-05-23 19:26:37] + BOINC_APP=ATLAS
[2024-05-23 19:26:37] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-23 19:26:37] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-23 19:26:37] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-23 19:26:37] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-23 19:26:37] + '[' -z 2 ']'
[2024-05-23 19:26:37] + '[' 2 == 1 ']'
[2024-05-23 19:26:37] + '[' 0 -ne 0 ']'
[2024-05-23 19:26:37] + echo 'zip all output files'
[2024-05-23 19:26:37] + flist='*.diag '
[2024-05-23 19:26:37] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-23 19:26:37] + '[' -e ./heartbeat.json ']'
[2024-05-23 19:26:37] + flist='*.diag ./heartbeat.json'
[2024-05-23 19:26:37] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-23 19:26:37] + '[' -e ./output.list ']'
[2024-05-23 19:26:37] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-23 19:26:37] + '[' -e ./log.38776146._002490.job.log.1 ']'
[2024-05-23 19:26:37] + flist='*.diag ./heartbeat.json ./log.38776146._002490.job.log.1'
[2024-05-23 19:26:37] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-23 19:26:37] + '[' -e ./log.38776146._002490.job.log.1 ']'
[2024-05-23 19:26:37] + flist='*.diag ./heartbeat.json ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1'
[2024-05-23 19:26:37] + for f in ./heartbeat.json ./output.list ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1 ./gmlog/
[2024-05-23 19:26:37] + '[' -e ./gmlog/ ']'
[2024-05-23 19:26:37] + '[' -f output.list ']'
[2024-05-23 19:26:37] + tar cvf result.tar.gz UXIKDmPhfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWsJKDmNcyxSm.diag ./heartbeat.json ./log.38776146._002490.job.log.1 ./log.38776146._002490.job.log.1
[2024-05-23 19:26:37] + '[' xgnutime = xcgroup ']'
[2024-05-23 19:26:37] + '[' -n '' ']'
[2024-05-23 19:26:37] + '[' -n '' ']'
[2024-05-23 19:26:37] ++ date +%s
[2024-05-23 19:26:37] + ACCOUNTING_ENDTIME=1716485061
[2024-05-23 19:26:37] ++ date -d '1970-01-01 UTC 1716484867 seconds' +%Y%m%d%H%M%SZ
[2024-05-23 19:26:37] + echo LRMSStartTime=20240523192107Z
[2024-05-23 19:26:37] ++ date -d '1970-01-01 UTC 1716485061 seconds' +%Y%m%d%H%M%SZ
[2024-05-23 19:26:37] + echo LRMSEndTime=20240523192421Z
[2024-05-23 19:26:37] + echo walltime=194
[2024-05-23 19:26:37] + echo exitcode=2
[2024-05-23 19:26:37] + exit 2
[2024-05-23 19:26:37] ./pilotlog.txt
[2024-05-23 19:26:37] ./log.38776146._002490.job.log.1
[2024-05-23 19:26:37] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-23 19:26:37] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-23 19:26:37] ./pilot3/pilot/util/loggingsupport.py
[2024-05-23 19:26:37] ./pilot3/pilot/util/realtimelogger.py
[2024-05-23 19:26:37] ./runtime_log.err
[2024-05-23 19:26:37] ./PanDA_Pilot-6205822206/pilotlog.txt
[2024-05-23 19:26:37] ./PanDA_Pilot-6205822206/PoolFileCatalog.xml
[2024-05-23 19:26:37] ./PanDA_Pilot-6205822206/prmon.log
[2024-05-23 19:26:37] ./PanDA_Pilot-6205822206/log.EVNTtoHITS
[2024-05-23 19:26:37] ./runtime_log
19:39:11 (1885368): run_atlas exited; CPU time 15.688418
19:39:11 (1885368): app exit status: 0x1
19:39:11 (1885368): called boinc_finish(195)
</stderr_txt>
]]>
©2024 CERN