Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:04:31 (1959640): wrapper (7.7.26015): starting
19:04:31 (1959640): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 19:04:31] Arguments: --nthreads 4
[2024-05-18 19:04:31] Threads: 4
[2024-05-18 19:04:31] Checking for CVMFS
[2024-05-18 19:04:31] No cvmfs_config command found, will try listing directly
[2024-05-18 19:04:31] CVMFS is ok
[2024-05-18 19:04:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 19:04:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 19:04:31] Further information can be found at the LHC@home message board.
[2024-05-18 19:04:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 19:04:31] Checking for apptainer binary...
[2024-05-18 19:04:31] which: no apptainer in ((null))
[2024-05-18 19:04:31] apptainer is not installed, using version from CVMFS
[2024-05-18 19:04:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 19:04:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-05-18 19:04:32] apptainer works
[2024-05-18 19:04:32] Set ATHENA_PROC_NUMBER=4
[2024-05-18 19:04:32] Set ATHENA_CORE_NUMBER=4
[2024-05-18 19:04:32] Starting ATLAS job with PandaID=6205821796
[2024-05-18 19:04:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 22:33:48]  *** The last 200 lines of the pilot log: ***
[2024-05-18 22:33:48] 2024-05-18 20:33:33,451 | INFO     | chi2: 4.1204429346964995
[2024-05-18 22:33:48] 2024-05-18 20:33:33,451 | INFO     | model: linear, x: [1716051902.0, 1716051963.0, 1716052024.0, 1716052085.0, 1716052146.0, 1716052207.0, 1716052268.0, 1716052329.0, 1716052390.0, 1716052451.0, 1716
[2024-05-18 22:33:48] 2024-05-18 20:33:33,451 | INFO     | sum of square deviations: 2480604650.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,452 | INFO     | sum of deviations: 88985352378.49997
[2024-05-18 22:33:48] 2024-05-18 20:33:33,452 | INFO     | mean x: 1716057971.5
[2024-05-18 22:33:48] 2024-05-18 20:33:33,452 | INFO     | mean y: 2278346.135
[2024-05-18 22:33:48] 2024-05-18 20:33:33,452 | INFO     | -- intersect: -61556915818.828514
[2024-05-18 22:33:48] 2024-05-18 20:33:33,452 | INFO     | intersect: -61556915818.828514
[2024-05-18 22:33:48] 2024-05-18 20:33:33,452 | INFO     | chi2: 4.120399950061675
[2024-05-18 22:33:48] 2024-05-18 20:33:33,453 | INFO     | current chi2=4.120399950061675 (change=0.0010432042260051138 %)
[2024-05-18 22:33:48] 2024-05-18 20:33:33,453 | INFO     | right removable region: 199
[2024-05-18 22:33:48] 2024-05-18 20:33:33,453 | INFO     | model: linear, x: [1716052207.0, 1716052268.0, 1716052329.0, 1716052390.0, 1716052451.0, 1716052512.0, 1716052573.0, 1716052634.0, 1716052695.0, 1716052756.0, 1716
[2024-05-18 22:33:48] 2024-05-18 20:33:33,453 | INFO     | sum of square deviations: 2480604650.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,453 | INFO     | sum of deviations: 43754282154.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,454 | INFO     | mean x: 1716058276.5
[2024-05-18 22:33:48] 2024-05-18 20:33:33,454 | INFO     | mean y: 2318345.39
[2024-05-18 22:33:48] 2024-05-18 20:33:33,454 | INFO     | -- intersect: -30266470364.12401
[2024-05-18 22:33:48] 2024-05-18 20:33:33,454 | INFO     | intersect: -30266470364.12401
[2024-05-18 22:33:48] 2024-05-18 20:33:33,454 | INFO     | chi2: 1.5961010317162982
[2024-05-18 22:33:48] 2024-05-18 20:33:33,454 | INFO     | current chi2=1.5961010317162982 (change=61.263848158745034 %)
[2024-05-18 22:33:48] 2024-05-18 20:33:33,454 | INFO     | model: linear, x: [1716052512.0, 1716052573.0, 1716052634.0, 1716052695.0, 1716052756.0, 1716052817.0, 1716052878.0, 1716052939.0, 1716053000.0, 1716053061.0, 1716
[2024-05-18 22:33:48] 2024-05-18 20:33:33,454 | INFO     | sum of square deviations: 2299168690.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,455 | INFO     | sum of deviations: 5044590871.000001
[2024-05-18 22:33:48] 2024-05-18 20:33:33,455 | INFO     | mean x: 1716058429.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,455 | INFO     | mean y: 2350885.2102564103
[2024-05-18 22:33:48] 2024-05-18 20:33:33,455 | INFO     | -- intersect: -3762841604.8788476
[2024-05-18 22:33:48] 2024-05-18 20:33:33,455 | INFO     | intersect: -3762841604.8788476
[2024-05-18 22:33:48] 2024-05-18 20:33:33,455 | INFO     | chi2: 0.06699298474745412
[2024-05-18 22:33:48] 2024-05-18 20:33:33,455 | INFO     | current chi2=0.06699298474745412 (change=95.80271026606529 %)
[2024-05-18 22:33:48] 2024-05-18 20:33:33,455 | INFO     | model: linear, x: [1716052817.0, 1716052878.0, 1716052939.0, 1716053000.0, 1716053061.0, 1716053122.0, 1716053183.0, 1716053244.0, 1716053305.0, 1716053366.0, 1716
[2024-05-18 22:33:48] 2024-05-18 20:33:33,455 | INFO     | sum of square deviations: 2126802667.5
[2024-05-18 22:33:48] 2024-05-18 20:33:33,456 | INFO     | sum of deviations: -771984402.0000001
[2024-05-18 22:33:48] 2024-05-18 20:33:33,456 | INFO     | mean x: 1716058581.5
[2024-05-18 22:33:48] 2024-05-18 20:33:33,456 | INFO     | mean y: 2355967.136842105
[2024-05-18 22:33:48] 2024-05-18 20:33:33,456 | INFO     | -- intersect: 625248950.1485094
[2024-05-18 22:33:48] 2024-05-18 20:33:33,456 | INFO     | intersect: 625248950.1485094
[2024-05-18 22:33:48] 2024-05-18 20:33:33,456 | INFO     | chi2: 0.0011327632000241279
[2024-05-18 22:33:48] 2024-05-18 20:33:33,456 | INFO     | current chi2=0.0011327632000241279 (change=98.30913161386323 %)
[2024-05-18 22:33:48] 2024-05-18 20:33:33,457 | INFO     | model: linear, x: [1716053122.0, 1716053183.0, 1716053244.0, 1716053305.0, 1716053366.0, 1716053427.0, 1716053488.0, 1716053549.0, 1716053610.0, 1716053671.0, 1716
[2024-05-18 22:33:48] 2024-05-18 20:33:33,457 | INFO     | sum of square deviations: 1963274020.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,457 | INFO     | sum of deviations: -1060559359.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,457 | INFO     | mean x: 1716058734.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,457 | INFO     | mean y: 2356232.7405405403
[2024-05-18 22:33:48] 2024-05-18 20:33:33,457 | INFO     | -- intersect: 929370053.7340009
[2024-05-18 22:33:48] 2024-05-18 20:33:33,457 | INFO     | intersect: 929370053.7340009
[2024-05-18 22:33:48] 2024-05-18 20:33:33,458 | INFO     | chi2: 0.000906217814304171
[2024-05-18 22:33:48] 2024-05-18 20:33:33,458 | INFO     | current chi2=0.000906217814304171 (change=19.999359593879056 %)
[2024-05-18 22:33:48] 2024-05-18 20:33:33,458 | INFO     | left removable region: 40
[2024-05-18 22:33:48] 2024-05-18 20:33:33,458 | INFO     | model: linear, x: [1716054342.0, 1716054403.0, 1716054464.0, 1716054525.0, 1716054586.0, 1716054647.0, 1716054708.0, 1716054769.0, 1716054830.0, 1716054891.0, 1716
[2024-05-18 22:33:48] 2024-05-18 20:33:33,458 | INFO     | sum of square deviations: 1246386160.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,458 | INFO     | sum of deviations: -785699093.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,458 | INFO     | mean x: 1716059161.0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,458 | INFO     | mean y: 2355643.5849056602
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | -- intersect: 1084128026.4971492
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | intersect: 1084128026.4971492
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | chi2: 0.00044889466788946127
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | -- intersect: 1084128026.4971492
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | current memory leak: -0.63 B/s (using 159 data points, chi2=0.00)
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | ..............................
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | . Timing measurements:
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | . get job = 0 s
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | . initial setup = 1 s
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | . payload setup = 4 s
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | . stage-in = 0 s
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | . payload execution = 12505 s
[2024-05-18 22:33:48] 2024-05-18 20:33:33,459 | INFO     | . stage-out = 1 s
[2024-05-18 22:33:48] 2024-05-18 20:33:33,460 | INFO     | . log creation = 0 s
[2024-05-18 22:33:48] 2024-05-18 20:33:33,460 | INFO     | ..............................
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | 
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | job summary report
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | --------------------------------------------------
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | PanDA job id: 6205821796
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | task id: 38776146
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | errors: (none)
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | pilot state: finished 
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | transexitcode: 0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | exeerrorcode: 0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | exeerrordiag: 
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | exitcode: 0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | exitmsg: OK
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | cpuconsumptiontime: 47307 s
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | nevents: 400
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | neventsw: 0
[2024-05-18 22:33:48] 2024-05-18 20:33:33,513 | INFO     | pid: 1971332
[2024-05-18 22:33:48] 2024-05-18 20:33:33,514 | INFO     | pgrp: 1971332
[2024-05-18 22:33:48] 2024-05-18 20:33:33,514 | INFO     | corecount: 4
[2024-05-18 22:33:48] 2024-05-18 20:33:33,514 | INFO     | event service: False
[2024-05-18 22:33:48] 2024-05-18 20:33:33,514 | INFO     | sizes: {0: 2392184, 3: 2392390, 11: 2392418, 12513: 2422277, 12514: 2431259, 12516: 2431315, 12519: 2431613}
[2024-05-18 22:33:48] 2024-05-18 20:33:33,514 | INFO     | --------------------------------------------------
[2024-05-18 22:33:48] 2024-05-18 20:33:33,514 | INFO     | 
[2024-05-18 22:33:48] 2024-05-18 20:33:33,514 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | job 6205821796 has completed (purged errors)
[2024-05-18 22:33:48] 2024-05-18 20:33:33,530 | INFO     | overall cleanup function is called
[2024-05-18 22:33:48] 2024-05-18 20:33:34,537 | INFO     | --- collectZombieJob: --- 10, [1971332]
[2024-05-18 22:33:48] 2024-05-18 20:33:34,537 | INFO     | zombie collector waiting for pid 1971332
[2024-05-18 22:33:48] 2024-05-18 20:33:34,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 22:33:48] 2024-05-18 20:33:35,541 | INFO     | collected zombie processes
[2024-05-18 22:33:48] 2024-05-18 20:33:35,541 | INFO     | will now attempt to kill all subprocesses of pid=1971332
[2024-05-18 22:33:48] 2024-05-18 20:33:35,682 | INFO     | process IDs to be killed: [1971332] (in reverse order)
[2024-05-18 22:33:48] 2024-05-18 20:33:35,790 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 22:33:48] 2024-05-18 20:33:35,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 22:33:48] 2024-05-18 20:33:35,798 | INFO     | did not find any defunct processes belonging to 1971332
[2024-05-18 22:33:48] 2024-05-18 20:33:35,805 | INFO     | did not find any defunct processes belonging to 1971332
[2024-05-18 22:33:48] 2024-05-18 20:33:35,805 | INFO     | ready for new job
[2024-05-18 22:33:48] 2024-05-18 20:33:35,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 22:33:48] 2024-05-18 20:33:35,807 | INFO     | *************************************
[2024-05-18 22:33:48] 2024-05-18 20:33:35,807 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 22:33:48] 2024-05-18 20:33:35,807 | INFO     | *************************************
[2024-05-18 22:33:48] 2024-05-18 20:33:35,807 | INFO     | 
[2024-05-18 22:33:48] 2024-05-18 20:33:35,810 | INFO     | architecture information:
[2024-05-18 22:33:48] 2024-05-18 20:33:35,811 | INFO     | executing command: cat /etc/os-release
[2024-05-18 22:33:48] 2024-05-18 20:33:35,825 | INFO     | cat /etc/os-release:
[2024-05-18 22:33:48] NAME="CentOS Linux"
[2024-05-18 22:33:48] VERSION="7 (Core)"
[2024-05-18 22:33:48] ID="centos"
[2024-05-18 22:33:48] ID_LIKE="rhel fedora"
[2024-05-18 22:33:48] VERSION_ID="7"
[2024-05-18 22:33:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 22:33:48] ANSI_COLOR="0;31"
[2024-05-18 22:33:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 22:33:48] HOME_URL="https://www.centos.org/"
[2024-05-18 22:33:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 22:33:48] 
[2024-05-18 22:33:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 22:33:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 22:33:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 22:33:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 22:33:48] 
[2024-05-18 22:33:48] 2024-05-18 20:33:35,825 | INFO     | *************************************
[2024-05-18 22:33:48] 2024-05-18 20:33:36,328 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-18 22:33:48] 2024-05-18 20:33:36,350 | INFO     | sufficient remaining disk space (594509037568 B)
[2024-05-18 22:33:48] 2024-05-18 20:33:36,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 22:33:48] 2024-05-18 20:33:36,351 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 22:33:48] 2024-05-18 20:33:36,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 22:33:48] 2024-05-18 20:33:36,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 22:33:48] 2024-05-18 20:33:36,621 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 22:33:48] 2024-05-18 20:33:36,622 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 22:33:48] 2024-05-18 20:33:36,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 22:33:48] 2024-05-18 20:33:36,622 | INFO     | will abort loop
[2024-05-18 22:33:48] 2024-05-18 20:33:36,719 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 22:33:48] 2024-05-18 20:33:36,719 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 22:33:48] 2024-05-18 20:33:36,719 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 22:33:48] 2024-05-18 20:33:36,824 | INFO     | all data control threads have been joined
[2024-05-18 22:33:48] 2024-05-18 20:33:37,125 | INFO     | all payload control threads have been joined
[2024-05-18 22:33:48] 2024-05-18 20:33:37,356 | INFO     | [job] retrieve thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:37,406 | INFO     | [payload] validate_post thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:37,522 | INFO     | [job] validate thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:37,627 | INFO     | [job] job monitor thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:37,640 | INFO     | all job control threads have been joined
[2024-05-18 22:33:48] 2024-05-18 20:33:37,696 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:37,778 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:37,829 | INFO     | [data] control thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:37,873 | INFO     | [data] copytool_in thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:38,130 | INFO     | [payload] control thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:38,164 | INFO     | [payload] failed_post thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:38,238 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:38,357 | INFO     | [data] copytool_out thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:38,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 22:33:48] 2024-05-18 20:33:38,645 | INFO     | [job] control thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:38,655 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:39,527 | INFO     | [job] queue monitor thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:40,357 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 22:33:48] 2024-05-18 20:33:42,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47620265247808)>', '<ExcThread(monitor, started 47620442801920)>']
[2024-05-18 22:33:48] 2024-05-18 20:33:42,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 22:33:48] 2024-05-18 20:33:42,749 | INFO     | [monitor] control thread has ended
[2024-05-18 22:33:48] 2024-05-18 20:33:47,104 | INFO     | all workflow threads have been joined
[2024-05-18 22:33:48] 2024-05-18 20:33:47,104 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 22:33:48] 2024-05-18 20:33:47,105 | INFO     | traces error code: 0
[2024-05-18 22:33:48] 2024-05-18 20:33:47,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 22:33:48] 2024-05-18 20:33:47,206 [wrapper] ==== pilot stdout END ====
[2024-05-18 22:33:48] 2024-05-18 20:33:47,210 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 22:33:48] 2024-05-18 20:33:47,214 [wrapper] pilotpid: 1964042
[2024-05-18 22:33:48] 2024-05-18 20:33:47,217 [wrapper] Pilot exit status: 0
[2024-05-18 22:33:48] 2024-05-18 20:33:47,227 [wrapper] pandaids: 6205821796
[2024-05-18 22:33:48] 2024-05-18 20:33:47,306 [wrapper] cleanup: SIGTERM to supervisor_pilot 2364791 1964043
[2024-05-18 22:33:48] 2024-05-18 20:33:47,310 [wrapper] Test setup, not cleaning
[2024-05-18 22:33:48] 2024-05-18 20:33:47,313 [wrapper] ==== wrapper stdout END ====
[2024-05-18 22:33:48] 2024-05-18 20:33:47,316 [wrapper] ==== wrapper stderr END ====
[2024-05-18 22:33:48] 2024-05-18 20:33:47,320 [wrapper] apfmon messages muted
[2024-05-18 22:33:48]  *** Error codes and diagnostics ***
[2024-05-18 22:33:48]     "exeErrorCode": 0,
[2024-05-18 22:33:48]     "exeErrorDiag": "",
[2024-05-18 22:33:48]     "pilotErrorCode": 0,
[2024-05-18 22:33:48]     "pilotErrorDiag": "",
[2024-05-18 22:33:48]  *** Listing of results directory ***
[2024-05-18 22:33:48] total 877976
[2024-05-18 22:33:48] -rwx------ 1 boinc boinc     32251 May 13 09:46 runpilot2-wrapper.sh
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc      5633 May 13 09:46 queuedata.json
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc    467845 May 13 09:46 pilot3.tar.gz
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc       100 May 18 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 22:33:48] -rwxr-xr-x 1 boinc boinc      7986 May 18 19:04 run_atlas
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc       105 May 18 19:04 job.xml
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc      6663 May 18 19:04 init_data.xml
[2024-05-18 22:33:48] -rw-r--r-- 2 boinc boinc 619293618 May 18 19:04 EVNT.38776140._000085.pool.root.1
[2024-05-18 22:33:48] -rw-r--r-- 2 boinc boinc     17537 May 18 19:04 start_atlas.sh
[2024-05-18 22:33:48] drwxrwx--x 2 boinc boinc      4096 May 18 19:04 shared
[2024-05-18 22:33:48] -rw-r--r-- 2 boinc boinc    479984 May 18 19:04 input.tar.gz
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc         0 May 18 19:04 boinc_lockfile
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc      2613 May 18 19:04 pandaJob.out
[2024-05-18 22:33:48] -rw------- 1 boinc boinc       424 May 18 19:04 setup.sh.local
[2024-05-18 22:33:48] -rw------- 1 boinc boinc   1019426 May 18 19:04 agis_schedconf.cvmfs.json
[2024-05-18 22:33:48] -rw------- 1 boinc boinc   1324701 May 18 19:04 cric_ddmendpoints.json
[2024-05-18 22:33:48] drwx------ 4 boinc boinc      4096 May 18 19:04 pilot3
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc       531 May 18 22:32 boinc_task_state.xml
[2024-05-18 22:33:48] -rw------- 1 boinc boinc 272913634 May 18 22:32 HITS.38776146._002114.pool.root.1
[2024-05-18 22:33:48] -rw------- 1 boinc boinc        95 May 18 22:33 pilot_heartbeat.json
[2024-05-18 22:33:48] -rw------- 1 boinc boinc      1052 May 18 22:33 memory_monitor_summary.json
[2024-05-18 22:33:48] -rw------- 1 boinc boinc         0 May 18 22:33 agis_ddmendpoints.agis.ALL.json
[2024-05-18 22:33:48] -rw------- 1 boinc boinc    318374 May 18 22:33 log.38776146._002114.job.log.tgz.1
[2024-05-18 22:33:48] -rw------- 1 boinc boinc      7768 May 18 22:33 heartbeat.json
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc      8192 May 18 22:33 boinc_mmap_file
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc        28 May 18 22:33 wrapper_checkpoint.txt
[2024-05-18 22:33:48] -rw------- 1 boinc boinc      4407 May 18 22:33 pilotlog.txt
[2024-05-18 22:33:48] -rw------- 1 boinc boinc   1335710 May 18 22:33 log.38776146._002114.job.log.1
[2024-05-18 22:33:48] -rw------- 1 boinc boinc       357 May 18 22:33 output.list
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc       620 May 18 22:33 runtime_log
[2024-05-18 22:33:48] -rw------- 1 boinc boinc   1669120 May 18 22:33 result.tar.gz
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc     11410 May 18 22:33 runtime_log.err
[2024-05-18 22:33:48] -rw------- 1 boinc boinc       657 May 18 22:33 EL9MDmGZfQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmQcGKDm2CnZVo.diag
[2024-05-18 22:33:48] -rw-r--r-- 1 boinc boinc     21336 May 18 22:33 stderr.txt
[2024-05-18 22:33:48] HITS file was successfully produced:
[2024-05-18 22:33:48] -rw------- 1 boinc boinc 272913634 May 18 22:32 shared/HITS.pool.root.1
[2024-05-18 22:33:48]  *** Contents of shared directory: ***
[2024-05-18 22:33:48] total 873432
[2024-05-18 22:33:48] -rw-r--r-- 2 boinc boinc 619293618 May 18 19:04 ATLAS.root_0
[2024-05-18 22:33:48] -rw-r--r-- 2 boinc boinc     17537 May 18 19:04 start_atlas.sh
[2024-05-18 22:33:48] -rw-r--r-- 2 boinc boinc    479984 May 18 19:04 input.tar.gz
[2024-05-18 22:33:48] -rw------- 1 boinc boinc 272913634 May 18 22:32 HITS.pool.root.1
[2024-05-18 22:33:48] -rw------- 1 boinc boinc   1669120 May 18 22:33 result.tar.gz
22:33:50 (1959640): run_atlas exited; CPU time 47047.729892
22:33:50 (1959640): called boinc_finish(0)

</stderr_txt>
]]>

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