Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:24:43 (3084408): wrapper (7.7.26015): starting
09:24:43 (3084408): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 09:24:43] Arguments: --nthreads 4
[2024-05-15 09:24:43] Threads: 4
[2024-05-15 09:24:43] Checking for CVMFS
[2024-05-15 09:24:43] No cvmfs_config command found, will try listing directly
[2024-05-15 09:24:43] CVMFS is ok
[2024-05-15 09:24:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 09:24:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 09:24:43] Further information can be found at the LHC@home message board.
[2024-05-15 09:24:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 09:24:43] Checking for apptainer binary...
[2024-05-15 09:24:43] which: no apptainer in ((null))
[2024-05-15 09:24:43] apptainer is not installed, using version from CVMFS
[2024-05-15 09:24:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 09:24:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-15 09:24:44] apptainer works
[2024-05-15 09:24:44] Set ATHENA_PROC_NUMBER=4
[2024-05-15 09:24:44] Set ATHENA_CORE_NUMBER=4
[2024-05-15 09:24:44] Starting ATLAS job with PandaID=6205821490
[2024-05-15 09:24:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 13:34:41]  *** The last 200 lines of the pilot log: ***
[2024-05-15 13:34:41] 2024-05-15 11:34:19,874 | INFO     | sum of square deviations: 4286517580.0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,875 | INFO     | sum of deviations: 86561349384.5
[2024-05-15 13:34:41] 2024-05-15 11:34:19,875 | INFO     | mean x: 1715765207.5
[2024-05-15 13:34:41] 2024-05-15 11:34:19,875 | INFO     | mean y: 2311200.0625
[2024-05-15 13:34:41] 2024-05-15 11:34:19,876 | INFO     | -- intersect: -34645616591.28384
[2024-05-15 13:34:41] 2024-05-15 11:34:19,876 | INFO     | intersect: -34645616591.28384
[2024-05-15 13:34:41] 2024-05-15 11:34:19,876 | INFO     | chi2: 3.5399677604793283
[2024-05-15 13:34:41] 2024-05-15 11:34:19,876 | INFO     | current chi2=3.5399677604793283 (change=-0.04340185865529837 %)
[2024-05-15 13:34:41] 2024-05-15 11:34:19,876 | INFO     | right removable region: 239
[2024-05-15 13:34:41] 2024-05-15 11:34:19,876 | INFO     | model: linear, x: [1715758223.0, 1715758284.0, 1715758345.0, 1715758406.0, 1715758467.0, 1715758528.0, 1715758589.0, 1715758650.0, 1715758711.0, 1715758772.0, 1715
[2024-05-15 13:34:41] 2024-05-15 11:34:19,876 | INFO     | sum of square deviations: 4286517580.0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,877 | INFO     | sum of deviations: 35392423351.49998
[2024-05-15 13:34:41] 2024-05-15 11:34:19,877 | INFO     | mean x: 1715765512.5
[2024-05-15 13:34:41] 2024-05-15 11:34:19,877 | INFO     | mean y: 2341826.0791666666
[2024-05-15 13:34:41] 2024-05-15 11:34:19,877 | INFO     | -- intersect: -14164192722.532978
[2024-05-15 13:34:41] 2024-05-15 11:34:19,877 | INFO     | intersect: -14164192722.532978
[2024-05-15 13:34:41] 2024-05-15 11:34:19,878 | INFO     | chi2: 1.3266533432902905
[2024-05-15 13:34:41] 2024-05-15 11:34:19,878 | INFO     | current chi2=1.3266533432902905 (change=62.50731008579926 %)
[2024-05-15 13:34:41] 2024-05-15 11:34:19,878 | INFO     | model: linear, x: [1715758528.0, 1715758589.0, 1715758650.0, 1715758711.0, 1715758772.0, 1715758833.0, 1715758894.0, 1715758955.0, 1715759016.0, 1715759077.0, 1715
[2024-05-15 13:34:41] 2024-05-15 11:34:19,878 | INFO     | sum of square deviations: 4024149870.0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,879 | INFO     | sum of deviations: -6505097279.000002
[2024-05-15 13:34:41] 2024-05-15 11:34:19,879 | INFO     | mean x: 1715765665.0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,879 | INFO     | mean y: 2366194.1574468086
[2024-05-15 13:34:41] 2024-05-15 11:34:19,879 | INFO     | -- intersect: 2775926553.327949
[2024-05-15 13:34:41] 2024-05-15 11:34:19,879 | INFO     | intersect: 2775926553.327949
[2024-05-15 13:34:41] 2024-05-15 11:34:19,879 | INFO     | chi2: 0.08748234117500847
[2024-05-15 13:34:41] 2024-05-15 11:34:19,880 | INFO     | current chi2=0.08748234117500847 (change=93.40578745627401 %)
[2024-05-15 13:34:41] 2024-05-15 11:34:19,880 | INFO     | model: linear, x: [1715758833.0, 1715758894.0, 1715758955.0, 1715759016.0, 1715759077.0, 1715759138.0, 1715759199.0, 1715759260.0, 1715759321.0, 1715759382.0, 1715
[2024-05-15 13:34:41] 2024-05-15 11:34:19,880 | INFO     | sum of square deviations: 3772712597.5
[2024-05-15 13:34:41] 2024-05-15 11:34:19,881 | INFO     | sum of deviations: -11521884990.5
[2024-05-15 13:34:41] 2024-05-15 11:34:19,881 | INFO     | mean x: 1715765817.5
[2024-05-15 13:34:41] 2024-05-15 11:34:19,881 | INFO     | mean y: 2369185.4739130433
[2024-05-15 13:34:41] 2024-05-15 11:34:19,881 | INFO     | -- intersect: 5242327414.194041
[2024-05-15 13:34:41] 2024-05-15 11:34:19,881 | INFO     | intersect: 5242327414.194041
[2024-05-15 13:34:41] 2024-05-15 11:34:19,881 | INFO     | chi2: 0.024298019524485764
[2024-05-15 13:34:41] 2024-05-15 11:34:19,881 | INFO     | current chi2=0.024298019524485764 (change=72.22522945987744 %)
[2024-05-15 13:34:41] 2024-05-15 11:34:19,882 | INFO     | model: linear, x: [1715759138.0, 1715759199.0, 1715759260.0, 1715759321.0, 1715759382.0, 1715759443.0, 1715759504.0, 1715759565.0, 1715759626.0, 1715759687.0, 1715
[2024-05-15 13:34:41] 2024-05-15 11:34:19,882 | INFO     | sum of square deviations: 3531973200.0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | sum of deviations: -8851429766.000002
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | mean x: 1715765970.0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | mean y: 2367492.991111111
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | -- intersect: 4302225141.499844
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | intersect: 4302225141.499844
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | chi2: 0.021416142790266855
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | current chi2=0.021416142790266855 (change=11.860541684538386 %)
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | left removable region: 40
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | model: linear, x: [1715760358.0, 1715760419.0, 1715760480.0, 1715760541.0, 1715760602.0, 1715760663.0, 1715760724.0, 1715760785.0, 1715760846.0, 1715760907.0, 1715
[2024-05-15 13:34:41] 2024-05-15 11:34:19,883 | INFO     | sum of square deviations: 2443580700.0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,884 | INFO     | sum of deviations: 86494217.9999996
[2024-05-15 13:34:41] 2024-05-15 11:34:19,884 | INFO     | mean x: 1715766397.0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,884 | INFO     | mean y: 2360939.703517588
[2024-05-15 13:34:41] 2024-05-15 11:34:19,884 | INFO     | -- intersect: -58371195.22421034
[2024-05-15 13:34:41] 2024-05-15 11:34:19,884 | INFO     | intersect: -58371195.22421034
[2024-05-15 13:34:41] 2024-05-15 11:34:19,885 | INFO     | chi2: 0.008267841608292081
[2024-05-15 13:34:41] 2024-05-15 11:34:19,885 | INFO     | -- intersect: -58371195.22421034
[2024-05-15 13:34:41] 2024-05-15 11:34:19,885 | INFO     | current memory leak: 0.04 B/s (using 199 data points, chi2=0.01)
[2024-05-15 13:34:41] 2024-05-15 11:34:19,885 | INFO     | ..............................
[2024-05-15 13:34:41] 2024-05-15 11:34:19,886 | INFO     | . Timing measurements:
[2024-05-15 13:34:41] 2024-05-15 11:34:19,886 | INFO     | . get job = 0 s
[2024-05-15 13:34:41] 2024-05-15 11:34:19,886 | INFO     | . initial setup = 1 s
[2024-05-15 13:34:41] 2024-05-15 11:34:19,886 | INFO     | . payload setup = 5 s
[2024-05-15 13:34:41] 2024-05-15 11:34:19,886 | INFO     | . stage-in = 0 s
[2024-05-15 13:34:41] 2024-05-15 11:34:19,886 | INFO     | . payload execution = 14937 s
[2024-05-15 13:34:41] 2024-05-15 11:34:19,886 | INFO     | . stage-out = 0 s
[2024-05-15 13:34:41] 2024-05-15 11:34:19,886 | INFO     | . log creation = 0 s
[2024-05-15 13:34:41] 2024-05-15 11:34:19,886 | INFO     | ..............................
[2024-05-15 13:34:41] 2024-05-15 11:34:19,996 | INFO     | 
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | job summary report
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | --------------------------------------------------
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | PanDA job id: 6205821490
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | task id: 38776146
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | errors: (none)
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | pilot state: finished 
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | transexitcode: 0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | exeerrorcode: 0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | exeerrordiag: 
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | exitcode: 0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | exitmsg: OK
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | cpuconsumptiontime: 57092 s
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | nevents: 400
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | neventsw: 0
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | pid: 3096535
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | pgrp: 3096535
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | corecount: 4
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | event service: False
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | sizes: {0: 2394490, 5: 2394696, 11: 2394752, 14945: 2425708, 14946: 2434745, 14948: 2434745, 14952: 2435043}
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | --------------------------------------------------
[2024-05-15 13:34:41] 2024-05-15 11:34:19,997 | INFO     | 
[2024-05-15 13:34:41] 2024-05-15 11:34:19,998 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-05-15 13:34:41] 2024-05-15 11:34:20,008 | WARNING  | process 3096535 is no longer using CPU - aborting
[2024-05-15 13:34:41] 2024-05-15 11:34:20,008 | INFO     | aborting job monitoring since job object (job id=6205821490) has expired
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | job 6205821490 has completed (purged errors)
[2024-05-15 13:34:41] 2024-05-15 11:34:20,026 | INFO     | overall cleanup function is called
[2024-05-15 13:34:41] 2024-05-15 11:34:21,030 | INFO     | --- collectZombieJob: --- 10, [3096535]
[2024-05-15 13:34:41] 2024-05-15 11:34:21,030 | INFO     | zombie collector waiting for pid 3096535
[2024-05-15 13:34:41] 2024-05-15 11:34:21,030 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 13:34:41] 2024-05-15 11:34:22,035 | INFO     | collected zombie processes
[2024-05-15 13:34:41] 2024-05-15 11:34:22,036 | INFO     | will now attempt to kill all subprocesses of pid=3096535
[2024-05-15 13:34:41] 2024-05-15 11:34:22,187 | INFO     | process IDs to be killed: [3096535] (in reverse order)
[2024-05-15 13:34:41] 2024-05-15 11:34:22,294 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 13:34:41] 2024-05-15 11:34:22,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 13:34:41] 2024-05-15 11:34:22,301 | INFO     | did not find any defunct processes belonging to 3096535
[2024-05-15 13:34:41] 2024-05-15 11:34:22,308 | INFO     | did not find any defunct processes belonging to 3096535
[2024-05-15 13:34:41] 2024-05-15 11:34:22,308 | INFO     | ready for new job
[2024-05-15 13:34:41] 2024-05-15 11:34:22,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 13:34:41] 2024-05-15 11:34:22,310 | INFO     | *************************************
[2024-05-15 13:34:41] 2024-05-15 11:34:22,310 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 13:34:41] 2024-05-15 11:34:22,310 | INFO     | *************************************
[2024-05-15 13:34:41] 2024-05-15 11:34:22,310 | INFO     | 
[2024-05-15 13:34:41] 2024-05-15 11:34:22,313 | INFO     | architecture information:
[2024-05-15 13:34:41] 2024-05-15 11:34:22,313 | INFO     | executing command: cat /etc/os-release
[2024-05-15 13:34:41] 2024-05-15 11:34:22,326 | INFO     | cat /etc/os-release:
[2024-05-15 13:34:41] NAME="CentOS Linux"
[2024-05-15 13:34:41] VERSION="7 (Core)"
[2024-05-15 13:34:41] ID="centos"
[2024-05-15 13:34:41] ID_LIKE="rhel fedora"
[2024-05-15 13:34:41] VERSION_ID="7"
[2024-05-15 13:34:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 13:34:41] ANSI_COLOR="0;31"
[2024-05-15 13:34:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 13:34:41] HOME_URL="https://www.centos.org/"
[2024-05-15 13:34:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 13:34:41] 
[2024-05-15 13:34:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 13:34:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 13:34:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 13:34:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 13:34:41] 
[2024-05-15 13:34:41] 2024-05-15 11:34:22,326 | INFO     | *************************************
[2024-05-15 13:34:41] 2024-05-15 11:34:22,829 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-05-15 13:34:41] 2024-05-15 11:34:22,846 | INFO     | sufficient remaining disk space (584165883904 B)
[2024-05-15 13:34:41] 2024-05-15 11:34:22,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 13:34:41] 2024-05-15 11:34:22,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 13:34:41] 2024-05-15 11:34:22,847 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 13:34:41] 2024-05-15 11:34:22,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 13:34:41] 2024-05-15 11:34:22,848 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 13:34:41] 2024-05-15 11:34:22,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 13:34:41] 2024-05-15 11:34:22,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 13:34:41] 2024-05-15 11:34:23,158 | INFO     | all data control threads have been joined
[2024-05-15 13:34:41] 2024-05-15 11:34:23,159 | INFO     | all payload control threads have been joined
[2024-05-15 13:34:41] 2024-05-15 11:34:23,315 | INFO     | all job control threads have been joined
[2024-05-15 13:34:41] 2024-05-15 11:34:23,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 13:34:41] 2024-05-15 11:34:23,516 | INFO     | aborting loop
[2024-05-15 13:34:41] 2024-05-15 11:34:23,852 | INFO     | [job] retrieve thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,017 | INFO     | [data] copytool_in thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,164 | INFO     | [data] control thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,164 | INFO     | [payload] control thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,196 | INFO     | [payload] validate_post thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,233 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,268 | INFO     | [job] validate thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,320 | INFO     | [job] control thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,521 | INFO     | [job] job monitor thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,797 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,852 | INFO     | [data] copytool_out thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,939 | INFO     | [payload] failed_post thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:24,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 13:34:41] 2024-05-15 11:34:25,036 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:25,957 | INFO     | [job] queue monitor thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:26,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 13:34:41] 2024-05-15 11:34:30,226 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:33,587 | INFO     | job.realtimelogging is not enabled
[2024-05-15 13:34:41] 2024-05-15 11:34:34,592 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 13:34:41] 2024-05-15 11:34:35,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47046188700736)>', '<ExcThread(monitor, started 47046362052352)>']
[2024-05-15 13:34:41] 2024-05-15 11:34:35,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 13:34:41] 2024-05-15 11:34:35,907 | INFO     | [monitor] control thread has ended
[2024-05-15 13:34:41] 2024-05-15 11:34:40,027 | INFO     | all workflow threads have been joined
[2024-05-15 13:34:41] 2024-05-15 11:34:40,027 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 13:34:41] 2024-05-15 11:34:40,027 | INFO     | traces error code: 0
[2024-05-15 13:34:41] 2024-05-15 11:34:40,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 13:34:41] 2024-05-15 11:34:40,119 [wrapper] ==== pilot stdout END ====
[2024-05-15 13:34:41] 2024-05-15 11:34:40,121 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 13:34:41] 2024-05-15 11:34:40,123 [wrapper] pilotpid: 3089109
[2024-05-15 13:34:41] 2024-05-15 11:34:40,125 [wrapper] Pilot exit status: 0
[2024-05-15 13:34:41] 2024-05-15 11:34:40,133 [wrapper] pandaids: 6205821490
[2024-05-15 13:34:41] 2024-05-15 11:34:40,198 [wrapper] cleanup: SIGTERM to supervisor_pilot 3645192 3089110
[2024-05-15 13:34:41] 2024-05-15 11:34:40,201 [wrapper] Test setup, not cleaning
[2024-05-15 13:34:41] 2024-05-15 11:34:40,203 [wrapper] ==== wrapper stdout END ====
[2024-05-15 13:34:41] 2024-05-15 11:34:40,205 [wrapper] ==== wrapper stderr END ====
[2024-05-15 13:34:41] 2024-05-15 11:34:40,209 [wrapper] apfmon messages muted
[2024-05-15 13:34:41]  *** Error codes and diagnostics ***
[2024-05-15 13:34:41]     "exeErrorCode": 0,
[2024-05-15 13:34:41]     "exeErrorDiag": "",
[2024-05-15 13:34:41]     "pilotErrorCode": 0,
[2024-05-15 13:34:41]     "pilotErrorDiag": "",
[2024-05-15 13:34:41]  *** Listing of results directory ***
[2024-05-15 13:34:41] total 874048
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc    467845 May 13 09:29 pilot3.tar.gz
[2024-05-15 13:34:41] -rwx------ 1 boinc boinc     32251 May 13 09:36 runpilot2-wrapper.sh
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc      5633 May 13 09:36 queuedata.json
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc       100 May 15 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 13:34:41] -rwxr-xr-x 1 boinc boinc      7986 May 15 09:24 run_atlas
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc       105 May 15 09:24 job.xml
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc      6662 May 15 09:24 init_data.xml
[2024-05-15 13:34:41] -rw-r--r-- 2 boinc boinc 613528478 May 15 09:24 EVNT.38776140._000079.pool.root.1
[2024-05-15 13:34:41] -rw-r--r-- 2 boinc boinc     17537 May 15 09:24 start_atlas.sh
[2024-05-15 13:34:41] drwxrwx--x 2 boinc boinc      4096 May 15 09:24 shared
[2024-05-15 13:34:41] -rw-r--r-- 2 boinc boinc    479993 May 15 09:24 input.tar.gz
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc         0 May 15 09:24 boinc_lockfile
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc      2613 May 15 09:24 pandaJob.out
[2024-05-15 13:34:41] -rw------- 1 boinc boinc       424 May 15 09:24 setup.sh.local
[2024-05-15 13:34:41] -rw------- 1 boinc boinc   1007418 May 15 09:24 agis_schedconf.cvmfs.json
[2024-05-15 13:34:41] -rw------- 1 boinc boinc   1324588 May 15 09:24 cric_ddmendpoints.json
[2024-05-15 13:34:41] drwx------ 4 boinc boinc      4096 May 15 09:24 pilot3
[2024-05-15 13:34:41] -rw------- 1 boinc boinc        95 May 15 13:33 pilot_heartbeat.json
[2024-05-15 13:34:41] -rw------- 1 boinc boinc 274018625 May 15 13:33 HITS.38776146._001963.pool.root.1
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc       532 May 15 13:33 boinc_task_state.xml
[2024-05-15 13:34:41] -rw------- 1 boinc boinc      1051 May 15 13:34 memory_monitor_summary.json
[2024-05-15 13:34:41] -rw------- 1 boinc boinc         0 May 15 13:34 agis_ddmendpoints.agis.ALL.json
[2024-05-15 13:34:41] -rw------- 1 boinc boinc    349370 May 15 13:34 log.38776146._001963.job.log.tgz.1
[2024-05-15 13:34:41] -rw------- 1 boinc boinc      7763 May 15 13:34 heartbeat.json
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc      8192 May 15 13:34 boinc_mmap_file
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc        28 May 15 13:34 wrapper_checkpoint.txt
[2024-05-15 13:34:41] -rw------- 1 boinc boinc      4416 May 15 13:34 pilotlog.txt
[2024-05-15 13:34:41] -rw------- 1 boinc boinc   1624003 May 15 13:34 log.38776146._001963.job.log.1
[2024-05-15 13:34:41] -rw------- 1 boinc boinc       357 May 15 13:34 output.list
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc       620 May 15 13:34 runtime_log
[2024-05-15 13:34:41] -rw------- 1 boinc boinc   1996800 May 15 13:34 result.tar.gz
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc     11410 May 15 13:34 runtime_log.err
[2024-05-15 13:34:41] -rw------- 1 boinc boinc       658 May 15 13:34 jETMDmtPfQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmObGKDmxVVhpm.diag
[2024-05-15 13:34:41] -rw-r--r-- 1 boinc boinc     21284 May 15 13:34 stderr.txt
[2024-05-15 13:34:41] HITS file was successfully produced:
[2024-05-15 13:34:41] -rw------- 1 boinc boinc 274018625 May 15 13:33 shared/HITS.pool.root.1
[2024-05-15 13:34:41]  *** Contents of shared directory: ***
[2024-05-15 13:34:41] total 869204
[2024-05-15 13:34:41] -rw-r--r-- 2 boinc boinc 613528478 May 15 09:24 ATLAS.root_0
[2024-05-15 13:34:41] -rw-r--r-- 2 boinc boinc     17537 May 15 09:24 start_atlas.sh
[2024-05-15 13:34:41] -rw-r--r-- 2 boinc boinc    479993 May 15 09:24 input.tar.gz
[2024-05-15 13:34:41] -rw------- 1 boinc boinc 274018625 May 15 13:33 HITS.pool.root.1
[2024-05-15 13:34:41] -rw------- 1 boinc boinc   1996800 May 15 13:34 result.tar.gz
13:34:42 (3084408): run_atlas exited; CPU time 56768.140628
13:34:42 (3084408): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN