Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:38:39 (103955): wrapper (7.7.26015): starting
11:38:39 (103955): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 11:38:39] Arguments: --nthreads 4
[2024-05-15 11:38:39] Threads: 4
[2024-05-15 11:38:39] Checking for CVMFS
[2024-05-15 11:38:39] No cvmfs_config command found, will try listing directly
[2024-05-15 11:38:39] CVMFS is ok
[2024-05-15 11:38:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 11:38:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 11:38:39] Further information can be found at the LHC@home message board.
[2024-05-15 11:38:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 11:38:39] Checking for apptainer binary...
[2024-05-15 11:38:39] which: no apptainer in ((null))
[2024-05-15 11:38:39] apptainer is not installed, using version from CVMFS
[2024-05-15 11:38:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 11:38:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-05-15 11:38:40] apptainer works
[2024-05-15 11:38:40] Set ATHENA_PROC_NUMBER=4
[2024-05-15 11:38:40] Set ATHENA_CORE_NUMBER=4
[2024-05-15 11:38:40] Starting ATLAS job with PandaID=6205820942
[2024-05-15 11:38:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 16:01:59]  *** The last 200 lines of the pilot log: ***
[2024-05-15 16:01:59] 2024-05-15 14:01:37,762 | INFO     | model: linear, x: [1715765953.0, 1715766014.0, 1715766075.0, 1715766136.0, 1715766197.0, 1715766258.0, 1715766319.0, 1715766380.0, 1715766441.0, 1715766502.0, 1715
[2024-05-15 16:01:59] 2024-05-15 14:01:37,763 | INFO     | sum of square deviations: 5021496942.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | sum of deviations: 103569902555.00003
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | mean x: 1715773639.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | mean y: 2306555.541501976
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | -- intersect: -35386046887.70307
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | intersect: -35386046887.70307
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | chi2: 3.7366313782975595
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | current chi2=3.7366313782975595 (change=-0.023462119529475585 %)
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | right removable region: 252
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | model: linear, x: [1715766258.0, 1715766319.0, 1715766380.0, 1715766441.0, 1715766502.0, 1715766563.0, 1715766624.0, 1715766685.0, 1715766746.0, 1715766807.0, 1715
[2024-05-15 16:01:59] 2024-05-15 14:01:37,764 | INFO     | sum of square deviations: 5021496942.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,765 | INFO     | sum of deviations: 48289676196.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,765 | INFO     | mean x: 1715773944.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,765 | INFO     | mean y: 2336484.418972332
[2024-05-15 16:01:59] 2024-05-15 14:01:37,766 | INFO     | -- intersect: -16497557698.189857
[2024-05-15 16:01:59] 2024-05-15 14:01:37,766 | INFO     | intersect: -16497557698.189857
[2024-05-15 16:01:59] 2024-05-15 14:01:37,766 | INFO     | chi2: 1.4436890755610092
[2024-05-15 16:01:59] 2024-05-15 14:01:37,766 | INFO     | current chi2=1.4436890755610092 (change=61.35482338438578 %)
[2024-05-15 16:01:59] 2024-05-15 14:01:37,766 | INFO     | model: linear, x: [1715766563.0, 1715766624.0, 1715766685.0, 1715766746.0, 1715766807.0, 1715766868.0, 1715766929.0, 1715766990.0, 1715767051.0, 1715767112.0, 1715
[2024-05-15 16:01:59] 2024-05-15 14:01:37,766 | INFO     | sum of square deviations: 4729621702.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,767 | INFO     | sum of deviations: 1731509613.5000002
[2024-05-15 16:01:59] 2024-05-15 14:01:37,767 | INFO     | mean x: 1715774096.5
[2024-05-15 16:01:59] 2024-05-15 14:01:37,767 | INFO     | mean y: 2360811.4717741935
[2024-05-15 16:01:59] 2024-05-15 14:01:37,767 | INFO     | -- intersect: -625782310.7207979
[2024-05-15 16:01:59] 2024-05-15 14:01:37,767 | INFO     | intersect: -625782310.7207979
[2024-05-15 16:01:59] 2024-05-15 14:01:37,767 | INFO     | chi2: 0.08151070995427405
[2024-05-15 16:01:59] 2024-05-15 14:01:37,768 | INFO     | current chi2=0.08151070995427405 (change=94.35399828577359 %)
[2024-05-15 16:01:59] 2024-05-15 14:01:37,768 | INFO     | model: linear, x: [1715766868.0, 1715766929.0, 1715766990.0, 1715767051.0, 1715767112.0, 1715767173.0, 1715767234.0, 1715767295.0, 1715767356.0, 1715767417.0, 1715
[2024-05-15 16:01:59] 2024-05-15 14:01:37,768 | INFO     | sum of square deviations: 4449281562.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,769 | INFO     | sum of deviations: -2886139055.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,769 | INFO     | mean x: 1715774249.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,769 | INFO     | mean y: 2363279.074074074
[2024-05-15 16:01:59] 2024-05-15 14:01:37,769 | INFO     | -- intersect: 1115343655.9275978
[2024-05-15 16:01:59] 2024-05-15 14:01:37,769 | INFO     | intersect: 1115343655.9275978
[2024-05-15 16:01:59] 2024-05-15 14:01:37,769 | INFO     | chi2: 0.02516090144761811
[2024-05-15 16:01:59] 2024-05-15 14:01:37,769 | INFO     | current chi2=0.02516090144761811 (change=69.13178469217985 %)
[2024-05-15 16:01:59] 2024-05-15 14:01:37,769 | INFO     | model: linear, x: [1715767173.0, 1715767234.0, 1715767295.0, 1715767356.0, 1715767417.0, 1715767478.0, 1715767539.0, 1715767600.0, 1715767661.0, 1715767722.0, 1715
[2024-05-15 16:01:59] 2024-05-15 14:01:37,769 | INFO     | sum of square deviations: 4180243959.5
[2024-05-15 16:01:59] 2024-05-15 14:01:37,770 | INFO     | sum of deviations: 22271526.999999214
[2024-05-15 16:01:59] 2024-05-15 14:01:37,770 | INFO     | mean x: 1715774401.5
[2024-05-15 16:01:59] 2024-05-15 14:01:37,770 | INFO     | mean y: 2361629.294117647
[2024-05-15 16:01:59] 2024-05-15 14:01:37,770 | INFO     | -- intersect: -6779683.097967097
[2024-05-15 16:01:59] 2024-05-15 14:01:37,770 | INFO     | intersect: -6779683.097967097
[2024-05-15 16:01:59] 2024-05-15 14:01:37,771 | INFO     | chi2: 0.01995249128936571
[2024-05-15 16:01:59] 2024-05-15 14:01:37,771 | INFO     | current chi2=0.01995249128936571 (change=20.700411585394367 %)
[2024-05-15 16:01:59] 2024-05-15 14:01:37,771 | INFO     | left removable region: 40
[2024-05-15 16:01:59] 2024-05-15 14:01:37,771 | INFO     | model: linear, x: [1715768393.0, 1715768454.0, 1715768515.0, 1715768576.0, 1715768637.0, 1715768698.0, 1715768759.0, 1715768820.0, 1715768881.0, 1715768942.0, 1715
[2024-05-15 16:01:59] 2024-05-15 14:01:37,771 | INFO     | sum of square deviations: 2954447953.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,772 | INFO     | sum of deviations: 3829483925.0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,772 | INFO     | mean x: 1715774828.5
[2024-05-15 16:01:59] 2024-05-15 14:01:37,772 | INFO     | mean y: 2359202.1603773586
[2024-05-15 16:01:59] 2024-05-15 14:01:37,772 | INFO     | -- intersect: -2221586600.6379232
[2024-05-15 16:01:59] 2024-05-15 14:01:37,772 | INFO     | intersect: -2221586600.6379232
[2024-05-15 16:01:59] 2024-05-15 14:01:37,772 | INFO     | chi2: 0.0008448116225162765
[2024-05-15 16:01:59] 2024-05-15 14:01:37,772 | INFO     | -- intersect: -2221586600.6379232
[2024-05-15 16:01:59] 2024-05-15 14:01:37,772 | INFO     | current memory leak: 1.30 B/s (using 212 data points, chi2=0.00)
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | ..............................
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | . Timing measurements:
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | . get job = 0 s
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | . initial setup = 1 s
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | . payload setup = 5 s
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | . stage-in = 0 s
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | . payload execution = 15739 s
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | . stage-out = 0 s
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | . log creation = 0 s
[2024-05-15 16:01:59] 2024-05-15 14:01:37,773 | INFO     | ..............................
[2024-05-15 16:01:59] 2024-05-15 14:01:37,829 | INFO     | 
[2024-05-15 16:01:59] 2024-05-15 14:01:37,829 | INFO     | job summary report
[2024-05-15 16:01:59] 2024-05-15 14:01:37,829 | INFO     | --------------------------------------------------
[2024-05-15 16:01:59] 2024-05-15 14:01:37,829 | INFO     | PanDA job id: 6205820942
[2024-05-15 16:01:59] 2024-05-15 14:01:37,829 | INFO     | task id: 38776146
[2024-05-15 16:01:59] 2024-05-15 14:01:37,829 | INFO     | errors: (none)
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | pilot state: finished 
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | transexitcode: 0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | exeerrorcode: 0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | exeerrordiag: 
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | exitcode: 0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | exitmsg: OK
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | cpuconsumptiontime: 59982 s
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | nevents: 400
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | neventsw: 0
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | pid: 117347
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | pgrp: 117347
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | corecount: 4
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | event service: False
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | sizes: {0: 2394489, 4: 2394695, 11: 2394723, 15748: 2426213, 15749: 2435195, 15750: 2435251, 15754: 2435549}
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | --------------------------------------------------
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | 
[2024-05-15 16:01:59] 2024-05-15 14:01:37,830 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-05-15 16:01:59] 2024-05-15 14:01:37,848 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,848 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 16:01:59] 2024-05-15 14:01:37,849 | INFO     | job 6205820942 has completed (purged errors)
[2024-05-15 16:01:59] 2024-05-15 14:01:37,850 | INFO     | overall cleanup function is called
[2024-05-15 16:01:59] 2024-05-15 14:01:38,056 | WARNING  | process 117347 is no longer using CPU - aborting
[2024-05-15 16:01:59] 2024-05-15 14:01:38,056 | INFO     | aborting job monitoring since job object (job id=6205820942) has expired
[2024-05-15 16:01:59] 2024-05-15 14:01:38,856 | INFO     | --- collectZombieJob: --- 10, [117347]
[2024-05-15 16:01:59] 2024-05-15 14:01:38,857 | INFO     | zombie collector waiting for pid 117347
[2024-05-15 16:01:59] 2024-05-15 14:01:38,857 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 16:01:59] 2024-05-15 14:01:39,862 | INFO     | collected zombie processes
[2024-05-15 16:01:59] 2024-05-15 14:01:39,862 | INFO     | will now attempt to kill all subprocesses of pid=117347
[2024-05-15 16:01:59] 2024-05-15 14:01:40,038 | INFO     | process IDs to be killed: [117347] (in reverse order)
[2024-05-15 16:01:59] 2024-05-15 14:01:40,150 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 16:01:59] 2024-05-15 14:01:40,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 16:01:59] 2024-05-15 14:01:40,158 | INFO     | did not find any defunct processes belonging to 117347
[2024-05-15 16:01:59] 2024-05-15 14:01:40,166 | INFO     | did not find any defunct processes belonging to 117347
[2024-05-15 16:01:59] 2024-05-15 14:01:40,166 | INFO     | ready for new job
[2024-05-15 16:01:59] 2024-05-15 14:01:40,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 16:01:59] 2024-05-15 14:01:40,168 | INFO     | *************************************
[2024-05-15 16:01:59] 2024-05-15 14:01:40,168 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 16:01:59] 2024-05-15 14:01:40,168 | INFO     | *************************************
[2024-05-15 16:01:59] 2024-05-15 14:01:40,168 | INFO     | 
[2024-05-15 16:01:59] 2024-05-15 14:01:40,171 | INFO     | architecture information:
[2024-05-15 16:01:59] 2024-05-15 14:01:40,171 | INFO     | executing command: cat /etc/os-release
[2024-05-15 16:01:59] 2024-05-15 14:01:40,187 | INFO     | cat /etc/os-release:
[2024-05-15 16:01:59] NAME="CentOS Linux"
[2024-05-15 16:01:59] VERSION="7 (Core)"
[2024-05-15 16:01:59] ID="centos"
[2024-05-15 16:01:59] ID_LIKE="rhel fedora"
[2024-05-15 16:01:59] VERSION_ID="7"
[2024-05-15 16:01:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 16:01:59] ANSI_COLOR="0;31"
[2024-05-15 16:01:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 16:01:59] HOME_URL="https://www.centos.org/"
[2024-05-15 16:01:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 16:01:59] 
[2024-05-15 16:01:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 16:01:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 16:01:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 16:01:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 16:01:59] 
[2024-05-15 16:01:59] 2024-05-15 14:01:40,187 | INFO     | *************************************
[2024-05-15 16:01:59] 2024-05-15 14:01:40,690 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-05-15 16:01:59] 2024-05-15 14:01:40,709 | INFO     | sufficient remaining disk space (581272862720 B)
[2024-05-15 16:01:59] 2024-05-15 14:01:40,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 16:01:59] 2024-05-15 14:01:40,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 16:01:59] 2024-05-15 14:01:40,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 16:01:59] 2024-05-15 14:01:40,935 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 16:01:59] 2024-05-15 14:01:40,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 16:01:59] 2024-05-15 14:01:40,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 16:01:59] 2024-05-15 14:01:41,231 | INFO     | all payload control threads have been joined
[2024-05-15 16:01:59] 2024-05-15 14:01:41,232 | INFO     | all job control threads have been joined
[2024-05-15 16:01:59] 2024-05-15 14:01:41,244 | INFO     | all data control threads have been joined
[2024-05-15 16:01:59] 2024-05-15 14:01:41,564 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 16:01:59] 2024-05-15 14:01:41,564 | INFO     | aborting loop
[2024-05-15 16:01:59] 2024-05-15 14:01:41,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 16:01:59] 2024-05-15 14:01:41,715 | INFO     | [job] retrieve thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:41,914 | INFO     | [payload] failed_post thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:42,103 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:42,219 | INFO     | [data] copytool_in thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:42,236 | INFO     | [payload] control thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:42,237 | INFO     | [job] control thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:42,249 | INFO     | [data] control thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:42,569 | INFO     | [job] job monitor thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:42,692 | INFO     | [job] validate thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:42,763 | INFO     | [payload] validate_post thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:42,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 16:01:59] 2024-05-15 14:01:43,193 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:43,201 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:43,575 | INFO     | [data] copytool_out thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:43,844 | INFO     | [job] queue monitor thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:44,716 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:51,730 | INFO     | job.realtimelogging is not enabled
[2024-05-15 16:01:59] 2024-05-15 14:01:52,735 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 16:01:59] 2024-05-15 14:01:53,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47589194028096)>', '<ExcThread(monitor, started 47589371582208)>']
[2024-05-15 16:01:59] 2024-05-15 14:01:53,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 16:01:59] 2024-05-15 14:01:53,991 | INFO     | [monitor] control thread has ended
[2024-05-15 16:01:59] 2024-05-15 14:01:58,788 | INFO     | all workflow threads have been joined
[2024-05-15 16:01:59] 2024-05-15 14:01:58,788 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 16:01:59] 2024-05-15 14:01:58,788 | INFO     | traces error code: 0
[2024-05-15 16:01:59] 2024-05-15 14:01:58,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 16:01:59] 2024-05-15 14:01:58,882 [wrapper] ==== pilot stdout END ====
[2024-05-15 16:01:59] 2024-05-15 14:01:58,884 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 16:01:59] 2024-05-15 14:01:58,890 [wrapper] pilotpid: 108296
[2024-05-15 16:01:59] 2024-05-15 14:01:58,895 [wrapper] Pilot exit status: 0
[2024-05-15 16:01:59] 2024-05-15 14:01:58,904 [wrapper] pandaids: 6205820942
[2024-05-15 16:01:59] 2024-05-15 14:01:58,972 [wrapper] cleanup: SIGTERM to supervisor_pilot  663174 108297
[2024-05-15 16:01:59] 2024-05-15 14:01:58,975 [wrapper] Test setup, not cleaning
[2024-05-15 16:01:59] 2024-05-15 14:01:58,977 [wrapper] ==== wrapper stdout END ====
[2024-05-15 16:01:59] 2024-05-15 14:01:58,979 [wrapper] ==== wrapper stderr END ====
[2024-05-15 16:01:59] 2024-05-15 14:01:58,983 [wrapper] apfmon messages muted
[2024-05-15 16:01:59]  *** Error codes and diagnostics ***
[2024-05-15 16:01:59]     "exeErrorCode": 0,
[2024-05-15 16:01:59]     "exeErrorDiag": "",
[2024-05-15 16:01:59]     "pilotErrorCode": 0,
[2024-05-15 16:01:59]     "pilotErrorDiag": "",
[2024-05-15 16:01:59]  *** Listing of results directory ***
[2024-05-15 16:01:59] total 870608
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc    467845 May 13 09:15 pilot3.tar.gz
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc      5633 May 13 09:25 queuedata.json
[2024-05-15 16:01:59] -rwx------ 1 boinc boinc     32251 May 13 09:25 runpilot2-wrapper.sh
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc       100 May 15 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 16:01:59] -rwxr-xr-x 1 boinc boinc      7986 May 15 11:38 run_atlas
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc       105 May 15 11:38 job.xml
[2024-05-15 16:01:59] -rw-r--r-- 2 boinc boinc 612709190 May 15 11:38 EVNT.38776140._000065.pool.root.1
[2024-05-15 16:01:59] -rw-r--r-- 2 boinc boinc    479989 May 15 11:38 input.tar.gz
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc      6663 May 15 11:38 init_data.xml
[2024-05-15 16:01:59] -rw-r--r-- 2 boinc boinc     17537 May 15 11:38 start_atlas.sh
[2024-05-15 16:01:59] drwxrwx--x 2 boinc boinc      4096 May 15 11:38 shared
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc         0 May 15 11:38 boinc_lockfile
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc      2612 May 15 11:38 pandaJob.out
[2024-05-15 16:01:59] -rw------- 1 boinc boinc       424 May 15 11:38 setup.sh.local
[2024-05-15 16:01:59] -rw------- 1 boinc boinc   1010936 May 15 11:38 agis_schedconf.cvmfs.json
[2024-05-15 16:01:59] -rw------- 1 boinc boinc   1324588 May 15 11:38 cric_ddmendpoints.json
[2024-05-15 16:01:59] drwx------ 4 boinc boinc      4096 May 15 11:38 pilot3
[2024-05-15 16:01:59] -rw------- 1 boinc boinc 271164666 May 15 16:00 HITS.38776146._001613.pool.root.1
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc       532 May 15 16:01 boinc_task_state.xml
[2024-05-15 16:01:59] -rw------- 1 boinc boinc      1051 May 15 16:01 memory_monitor_summary.json
[2024-05-15 16:01:59] -rw------- 1 boinc boinc        95 May 15 16:01 pilot_heartbeat.json
[2024-05-15 16:01:59] -rw------- 1 boinc boinc         0 May 15 16:01 agis_ddmendpoints.agis.ALL.json
[2024-05-15 16:01:59] -rw------- 1 boinc boinc    356571 May 15 16:01 log.38776146._001613.job.log.tgz.1
[2024-05-15 16:01:59] -rw------- 1 boinc boinc      7762 May 15 16:01 heartbeat.json
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc      8192 May 15 16:01 boinc_mmap_file
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc        28 May 15 16:01 wrapper_checkpoint.txt
[2024-05-15 16:01:59] -rw------- 1 boinc boinc      4293 May 15 16:01 pilotlog.txt
[2024-05-15 16:01:59] -rw------- 1 boinc boinc   1694800 May 15 16:01 log.38776146._001613.job.log.1
[2024-05-15 16:01:59] -rw------- 1 boinc boinc       357 May 15 16:01 output.list
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc       620 May 15 16:01 runtime_log
[2024-05-15 16:01:59] -rw------- 1 boinc boinc   2068480 May 15 16:01 result.tar.gz
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc     11410 May 15 16:01 runtime_log.err
[2024-05-15 16:01:59] -rw------- 1 boinc boinc       658 May 15 16:01 fuGMDmJFfQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmemJKDmK3jvMm.diag
[2024-05-15 16:01:59] -rw-r--r-- 1 boinc boinc     21356 May 15 16:01 stderr.txt
[2024-05-15 16:01:59] HITS file was successfully produced:
[2024-05-15 16:01:59] -rw------- 1 boinc boinc 271164666 May 15 16:00 shared/HITS.pool.root.1
[2024-05-15 16:01:59]  *** Contents of shared directory: ***
[2024-05-15 16:01:59] total 865684
[2024-05-15 16:01:59] -rw-r--r-- 2 boinc boinc 612709190 May 15 11:38 ATLAS.root_0
[2024-05-15 16:01:59] -rw-r--r-- 2 boinc boinc    479989 May 15 11:38 input.tar.gz
[2024-05-15 16:01:59] -rw-r--r-- 2 boinc boinc     17537 May 15 11:38 start_atlas.sh
[2024-05-15 16:01:59] -rw------- 1 boinc boinc 271164666 May 15 16:00 HITS.pool.root.1
[2024-05-15 16:01:59] -rw------- 1 boinc boinc   2068480 May 15 16:01 result.tar.gz
16:02:01 (103955): run_atlas exited; CPU time 59662.243961
16:02:01 (103955): called boinc_finish(0)

</stderr_txt>
]]>

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