Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:26:03 (2298125): wrapper (7.7.26015): starting
21:26:03 (2298125): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 21:26:03] Arguments: --nthreads 4
[2024-05-16 21:26:03] Threads: 4
[2024-05-16 21:26:03] Checking for CVMFS
[2024-05-16 21:26:03] No cvmfs_config command found, will try listing directly
[2024-05-16 21:26:03] CVMFS is ok
[2024-05-16 21:26:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 21:26:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 21:26:03] Further information can be found at the LHC@home message board.
[2024-05-16 21:26:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 21:26:03] Checking for apptainer binary...
[2024-05-16 21:26:03] which: no apptainer in ((null))
[2024-05-16 21:26:03] apptainer is not installed, using version from CVMFS
[2024-05-16 21:26:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 21:26:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-16 21:26:04] apptainer works
[2024-05-16 21:26:04] Set ATHENA_PROC_NUMBER=4
[2024-05-16 21:26:04] Set ATHENA_CORE_NUMBER=4
[2024-05-16 21:26:04] Starting ATLAS job with PandaID=6205820608
[2024-05-16 21:26:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 01:02:35]  *** The last 200 lines of the pilot log: ***
[2024-05-17 01:02:35] 2024-05-16 23:02:21,389 | INFO     | intersect: -48549017985.222
[2024-05-17 01:02:35] 2024-05-16 23:02:21,389 | INFO     | chi2: 3.3116644731955986
[2024-05-17 01:02:35] 2024-05-16 23:02:21,389 | INFO     | model: linear, x: [1715887615.0, 1715887676.0, 1715887737.0, 1715887798.0, 1715887859.0, 1715887920.0, 1715887981.0, 1715888042.0, 1715888103.0, 1715888164.0, 1715
[2024-05-17 01:02:35] 2024-05-16 23:02:21,390 | INFO     | sum of square deviations: 2750295288.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,391 | INFO     | sum of deviations: 81237041274.99998
[2024-05-17 01:02:35] 2024-05-16 23:02:21,391 | INFO     | mean x: 1715893898.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,391 | INFO     | mean y: 2291050.111111111
[2024-05-17 01:02:35] 2024-05-16 23:02:21,391 | INFO     | -- intersect: -50681046125.91746
[2024-05-17 01:02:35] 2024-05-16 23:02:21,392 | INFO     | intersect: -50681046125.91746
[2024-05-17 01:02:35] 2024-05-16 23:02:21,392 | INFO     | chi2: 3.311751388304447
[2024-05-17 01:02:35] 2024-05-16 23:02:21,392 | INFO     | current chi2=3.311751388304447 (change=-0.002624514335669263 %)
[2024-05-17 01:02:35] 2024-05-16 23:02:21,392 | INFO     | right removable region: 206
[2024-05-17 01:02:35] 2024-05-16 23:02:21,393 | INFO     | model: linear, x: [1715887920.0, 1715887981.0, 1715888042.0, 1715888103.0, 1715888164.0, 1715888225.0, 1715888286.0, 1715888347.0, 1715888408.0, 1715888469.0, 1715
[2024-05-17 01:02:35] 2024-05-16 23:02:21,393 | INFO     | sum of square deviations: 2750295288.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,394 | INFO     | sum of deviations: 38099639067.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,394 | INFO     | mean x: 1715894203.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,394 | INFO     | mean y: 2326679.618357488
[2024-05-17 01:02:35] 2024-05-16 23:02:21,395 | INFO     | -- intersect: -23767829963.81535
[2024-05-17 01:02:35] 2024-05-16 23:02:21,395 | INFO     | intersect: -23767829963.81535
[2024-05-17 01:02:35] 2024-05-16 23:02:21,395 | INFO     | chi2: 1.1452175584989202
[2024-05-17 01:02:35] 2024-05-16 23:02:21,395 | INFO     | current chi2=1.1452175584989202 (change=65.41867185615456 %)
[2024-05-17 01:02:35] 2024-05-16 23:02:21,395 | INFO     | model: linear, x: [1715888225.0, 1715888286.0, 1715888347.0, 1715888408.0, 1715888469.0, 1715888530.0, 1715888591.0, 1715888652.0, 1715888713.0, 1715888774.0, 1715
[2024-05-17 01:02:35] 2024-05-16 23:02:21,396 | INFO     | sum of square deviations: 2555770710.5
[2024-05-17 01:02:35] 2024-05-16 23:02:21,397 | INFO     | sum of deviations: 3688261086.4999995
[2024-05-17 01:02:35] 2024-05-16 23:02:21,397 | INFO     | mean x: 1715894355.5
[2024-05-17 01:02:35] 2024-05-16 23:02:21,397 | INFO     | mean y: 2353662.628712871
[2024-05-17 01:02:35] 2024-05-16 23:02:21,397 | INFO     | -- intersect: -2473872531.6598716
[2024-05-17 01:02:35] 2024-05-16 23:02:21,398 | INFO     | intersect: -2473872531.6598716
[2024-05-17 01:02:35] 2024-05-16 23:02:21,398 | INFO     | chi2: 0.037536266543096386
[2024-05-17 01:02:35] 2024-05-16 23:02:21,398 | INFO     | current chi2=0.037536266543096386 (change=96.72234622456396 %)
[2024-05-17 01:02:35] 2024-05-16 23:02:21,398 | INFO     | model: linear, x: [1715888530.0, 1715888591.0, 1715888652.0, 1715888713.0, 1715888774.0, 1715888835.0, 1715888896.0, 1715888957.0, 1715889018.0, 1715889079.0, 1715
[2024-05-17 01:02:35] 2024-05-16 23:02:21,399 | INFO     | sum of square deviations: 2370641658.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,400 | INFO     | sum of deviations: 692551788.000001
[2024-05-17 01:02:35] 2024-05-16 23:02:21,400 | INFO     | mean x: 1715894508.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,400 | INFO     | mean y: 2356081.781725888
[2024-05-17 01:02:35] 2024-05-16 23:02:21,400 | INFO     | -- intersect: -498919935.8418461
[2024-05-17 01:02:35] 2024-05-16 23:02:21,400 | INFO     | intersect: -498919935.8418461
[2024-05-17 01:02:35] 2024-05-16 23:02:21,401 | INFO     | chi2: 0.003527668889447926
[2024-05-17 01:02:35] 2024-05-16 23:02:21,401 | INFO     | current chi2=0.003527668889447926 (change=90.60197186793279 %)
[2024-05-17 01:02:35] 2024-05-16 23:02:21,401 | INFO     | model: linear, x: [1715888835.0, 1715888896.0, 1715888957.0, 1715889018.0, 1715889079.0, 1715889140.0, 1715889201.0, 1715889262.0, 1715889323.0, 1715889384.0, 1715
[2024-05-17 01:02:35] 2024-05-16 23:02:21,401 | INFO     | sum of square deviations: 2194675568.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,403 | INFO     | sum of deviations: 870234967.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,403 | INFO     | mean x: 1715894660.5
[2024-05-17 01:02:35] 2024-05-16 23:02:21,403 | INFO     | mean y: 2355926.6875
[2024-05-17 01:02:35] 2024-05-16 23:02:21,403 | INFO     | -- intersect: -678032352.5771525
[2024-05-17 01:02:35] 2024-05-16 23:02:21,403 | INFO     | intersect: -678032352.5771525
[2024-05-17 01:02:35] 2024-05-16 23:02:21,404 | INFO     | chi2: 0.0034590976089897093
[2024-05-17 01:02:35] 2024-05-16 23:02:21,404 | INFO     | current chi2=0.0034590976089897093 (change=1.943812829580731 %)
[2024-05-17 01:02:35] 2024-05-16 23:02:21,404 | INFO     | left removable region: 40
[2024-05-17 01:02:35] 2024-05-16 23:02:21,404 | INFO     | model: linear, x: [1715890055.0, 1715890116.0, 1715890177.0, 1715890238.0, 1715890299.0, 1715890360.0, 1715890421.0, 1715890482.0, 1715890543.0, 1715890604.0, 1715
[2024-05-17 01:02:35] 2024-05-16 23:02:21,404 | INFO     | sum of square deviations: 1418361477.5
[2024-05-17 01:02:35] 2024-05-16 23:02:21,405 | INFO     | sum of deviations: 2309042455.0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,406 | INFO     | mean x: 1715895087.5
[2024-05-17 01:02:35] 2024-05-16 23:02:21,406 | INFO     | mean y: 2353707.1325301207
[2024-05-17 01:02:35] 2024-05-16 23:02:21,406 | INFO     | -- intersect: -2791062969.938382
[2024-05-17 01:02:35] 2024-05-16 23:02:21,406 | INFO     | intersect: -2791062969.938382
[2024-05-17 01:02:35] 2024-05-16 23:02:21,406 | INFO     | chi2: 0.001725894793149374
[2024-05-17 01:02:35] 2024-05-16 23:02:21,406 | INFO     | -- intersect: -2791062969.938382
[2024-05-17 01:02:35] 2024-05-16 23:02:21,406 | INFO     | current memory leak: 1.63 B/s (using 166 data points, chi2=0.00)
[2024-05-17 01:02:35] 2024-05-16 23:02:21,407 | INFO     | ..............................
[2024-05-17 01:02:35] 2024-05-16 23:02:21,407 | INFO     | . Timing measurements:
[2024-05-17 01:02:35] 2024-05-16 23:02:21,407 | INFO     | . get job = 0 s
[2024-05-17 01:02:35] 2024-05-16 23:02:21,407 | INFO     | . initial setup = 1 s
[2024-05-17 01:02:35] 2024-05-16 23:02:21,407 | INFO     | . payload setup = 10 s
[2024-05-17 01:02:35] 2024-05-16 23:02:21,407 | INFO     | . stage-in = 0 s
[2024-05-17 01:02:35] 2024-05-16 23:02:21,408 | INFO     | . payload execution = 12918 s
[2024-05-17 01:02:35] 2024-05-16 23:02:21,408 | INFO     | . stage-out = 0 s
[2024-05-17 01:02:35] 2024-05-16 23:02:21,408 | INFO     | . log creation = 0 s
[2024-05-17 01:02:35] 2024-05-16 23:02:21,408 | INFO     | ..............................
[2024-05-17 01:02:35] 2024-05-16 23:02:21,712 | INFO     | 
[2024-05-17 01:02:35] 2024-05-16 23:02:21,713 | INFO     | job summary report
[2024-05-17 01:02:35] 2024-05-16 23:02:21,713 | INFO     | --------------------------------------------------
[2024-05-17 01:02:35] 2024-05-16 23:02:21,713 | INFO     | PanDA job id: 6205820608
[2024-05-17 01:02:35] 2024-05-16 23:02:21,713 | INFO     | task id: 38776146
[2024-05-17 01:02:35] 2024-05-16 23:02:21,713 | INFO     | errors: (none)
[2024-05-17 01:02:35] 2024-05-16 23:02:21,713 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 01:02:35] 2024-05-16 23:02:21,713 | INFO     | pilot state: finished 
[2024-05-17 01:02:35] 2024-05-16 23:02:21,713 | INFO     | transexitcode: 0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | exeerrorcode: 0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | exeerrordiag: 
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | exitcode: 0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | exitmsg: OK
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | cpuconsumptiontime: 48989 s
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | nevents: 400
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | neventsw: 0
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | pid: 2310443
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | pgrp: 2310443
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | corecount: 4
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | event service: False
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | sizes: {0: 2392185, 7: 2392391, 11: 2392419, 12932: 2422253, 12933: 2422252, 12935: 2431292, 12937: 2431476, 12944: 2431646}
[2024-05-17 01:02:35] 2024-05-16 23:02:21,714 | INFO     | --------------------------------------------------
[2024-05-17 01:02:35] 2024-05-16 23:02:21,715 | INFO     | 
[2024-05-17 01:02:35] 2024-05-16 23:02:21,715 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/1
[2024-05-17 01:02:35] 2024-05-16 23:02:21,737 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,738 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,738 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,738 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 01:02:35] 2024-05-16 23:02:21,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,740 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 01:02:35] 2024-05-16 23:02:21,740 | INFO     | job 6205820608 has completed (purged errors)
[2024-05-17 01:02:35] 2024-05-16 23:02:21,740 | INFO     | overall cleanup function is called
[2024-05-17 01:02:35] 2024-05-16 23:02:22,748 | INFO     | --- collectZombieJob: --- 10, [2310443]
[2024-05-17 01:02:35] 2024-05-16 23:02:22,748 | INFO     | zombie collector waiting for pid 2310443
[2024-05-17 01:02:35] 2024-05-16 23:02:22,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 01:02:35] 2024-05-16 23:02:23,753 | INFO     | collected zombie processes
[2024-05-17 01:02:35] 2024-05-16 23:02:23,754 | INFO     | will now attempt to kill all subprocesses of pid=2310443
[2024-05-17 01:02:35] 2024-05-16 23:02:23,959 | INFO     | process IDs to be killed: [2310443] (in reverse order)
[2024-05-17 01:02:35] 2024-05-16 23:02:24,077 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 01:02:35] 2024-05-16 23:02:24,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 01:02:35] 2024-05-16 23:02:24,096 | INFO     | did not find any defunct processes belonging to 2310443
[2024-05-17 01:02:35] 2024-05-16 23:02:24,112 | INFO     | did not find any defunct processes belonging to 2310443
[2024-05-17 01:02:35] 2024-05-16 23:02:24,112 | INFO     | ready for new job
[2024-05-17 01:02:35] 2024-05-16 23:02:24,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 01:02:35] 2024-05-16 23:02:24,115 | INFO     | *************************************
[2024-05-17 01:02:35] 2024-05-16 23:02:24,115 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 01:02:35] 2024-05-16 23:02:24,115 | INFO     | *************************************
[2024-05-17 01:02:35] 2024-05-16 23:02:24,115 | INFO     | 
[2024-05-17 01:02:35] 2024-05-16 23:02:24,124 | INFO     | architecture information:
[2024-05-17 01:02:35] 2024-05-16 23:02:24,124 | INFO     | executing command: cat /etc/os-release
[2024-05-17 01:02:35] 2024-05-16 23:02:24,140 | INFO     | cat /etc/os-release:
[2024-05-17 01:02:35] NAME="CentOS Linux"
[2024-05-17 01:02:35] VERSION="7 (Core)"
[2024-05-17 01:02:35] ID="centos"
[2024-05-17 01:02:35] ID_LIKE="rhel fedora"
[2024-05-17 01:02:35] VERSION_ID="7"
[2024-05-17 01:02:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 01:02:35] ANSI_COLOR="0;31"
[2024-05-17 01:02:35] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 01:02:35] HOME_URL="https://www.centos.org/"
[2024-05-17 01:02:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 01:02:35] 
[2024-05-17 01:02:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 01:02:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 01:02:35] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 01:02:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 01:02:35] 
[2024-05-17 01:02:35] 2024-05-16 23:02:24,140 | INFO     | *************************************
[2024-05-17 01:02:35] 2024-05-16 23:02:24,643 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/1
[2024-05-17 01:02:35] 2024-05-16 23:02:24,664 | INFO     | sufficient remaining disk space (3084995526656 B)
[2024-05-17 01:02:35] 2024-05-16 23:02:24,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 01:02:35] 2024-05-16 23:02:24,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 01:02:35] 2024-05-16 23:02:24,665 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 01:02:35] 2024-05-16 23:02:24,665 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 01:02:35] 2024-05-16 23:02:24,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 01:02:35] 2024-05-16 23:02:24,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 01:02:35] 2024-05-16 23:02:24,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 01:02:35] 2024-05-16 23:02:24,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 01:02:35] 2024-05-16 23:02:25,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 01:02:35] 2024-05-16 23:02:25,195 | INFO     | aborting loop
[2024-05-17 01:02:35] 2024-05-16 23:02:25,304 | INFO     | all data control threads have been joined
[2024-05-17 01:02:35] 2024-05-16 23:02:25,425 | INFO     | all job control threads have been joined
[2024-05-17 01:02:35] 2024-05-16 23:02:25,670 | INFO     | [job] retrieve thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:25,903 | INFO     | [job] validate thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:25,913 | INFO     | all payload control threads have been joined
[2024-05-17 01:02:35] 2024-05-16 23:02:26,061 | INFO     | [data] copytool_in thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,201 | INFO     | [job] job monitor thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,288 | INFO     | [payload] failed_post thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,309 | INFO     | [data] control thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,321 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,431 | INFO     | [job] control thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,459 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 01:02:35] 2024-05-16 23:02:26,751 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,836 | INFO     | [data] copytool_out thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,868 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,888 | INFO     | [payload] validate_post thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:26,918 | INFO     | [payload] control thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:27,516 | INFO     | [job] queue monitor thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:28,693 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 01:02:35] 2024-05-16 23:02:29,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47424881378368)>', '<ExcThread(monitor, started 47425056831232)>']
[2024-05-17 01:02:35] 2024-05-16 23:02:29,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 01:02:35] 2024-05-16 23:02:29,692 | INFO     | [monitor] control thread has ended
[2024-05-17 01:02:35] 2024-05-16 23:02:34,552 | INFO     | all workflow threads have been joined
[2024-05-17 01:02:35] 2024-05-16 23:02:34,552 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 01:02:35] 2024-05-16 23:02:34,552 | INFO     | traces error code: 0
[2024-05-17 01:02:35] 2024-05-16 23:02:34,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 01:02:35] 2024-05-16 23:02:34,643 [wrapper] ==== pilot stdout END ====
[2024-05-17 01:02:35] 2024-05-16 23:02:34,645 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 01:02:35] 2024-05-16 23:02:34,647 [wrapper] pilotpid: 2302818
[2024-05-17 01:02:35] 2024-05-16 23:02:34,649 [wrapper] Pilot exit status: 0
[2024-05-17 01:02:35] 2024-05-16 23:02:34,659 [wrapper] pandaids: 6205820608
[2024-05-17 01:02:35] 2024-05-16 23:02:34,781 [wrapper] cleanup: SIGTERM to supervisor_pilot 3228931 2302819
[2024-05-17 01:02:35] 2024-05-16 23:02:34,783 [wrapper] Test setup, not cleaning
[2024-05-17 01:02:35] 2024-05-16 23:02:34,785 [wrapper] ==== wrapper stdout END ====
[2024-05-17 01:02:35] 2024-05-16 23:02:34,788 [wrapper] ==== wrapper stderr END ====
[2024-05-17 01:02:35] 2024-05-16 23:02:34,792 [wrapper] apfmon messages muted
[2024-05-17 01:02:35]  *** Error codes and diagnostics ***
[2024-05-17 01:02:35]     "exeErrorCode": 0,
[2024-05-17 01:02:35]     "exeErrorDiag": "",
[2024-05-17 01:02:35]     "pilotErrorCode": 0,
[2024-05-17 01:02:35]     "pilotErrorDiag": "",
[2024-05-17 01:02:35]  *** Listing of results directory ***
[2024-05-17 01:02:35] total 880244
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc      5633 May 13 09:15 queuedata.json
[2024-05-17 01:02:35] -rwx------ 1 boinc boinc     32251 May 13 09:15 runpilot2-wrapper.sh
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc    467845 May 13 09:15 pilot3.tar.gz
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc       100 May 16 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 01:02:35] -rwxr-xr-x 1 boinc boinc      7986 May 16 21:25 run_atlas
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc       105 May 16 21:25 job.xml
[2024-05-17 01:02:35] drwxrwx--x 2 boinc boinc      4096 May 16 21:26 shared
[2024-05-17 01:02:35] -rw-r--r-- 2 boinc boinc    479985 May 16 21:26 input.tar.gz
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc      6645 May 16 21:26 init_data.xml
[2024-05-17 01:02:35] -rw-r--r-- 2 boinc boinc 616371375 May 16 21:26 EVNT.38776140._000055.pool.root.1
[2024-05-17 01:02:35] -rw-r--r-- 2 boinc boinc     17537 May 16 21:26 start_atlas.sh
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc         0 May 16 21:26 boinc_lockfile
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc      2613 May 16 21:26 pandaJob.out
[2024-05-17 01:02:35] -rw------- 1 boinc boinc       424 May 16 21:26 setup.sh.local
[2024-05-17 01:02:35] -rw------- 1 boinc boinc   1019286 May 16 21:26 agis_schedconf.cvmfs.json
[2024-05-17 01:02:35] -rw------- 1 boinc boinc   1324701 May 16 21:26 cric_ddmendpoints.json
[2024-05-17 01:02:35] drwx------ 4 boinc boinc      4096 May 16 21:26 pilot3
[2024-05-17 01:02:35] -rw------- 1 boinc boinc 278021976 May 17 01:01 HITS.38776146._001373.pool.root.1
[2024-05-17 01:02:35] -rw------- 1 boinc boinc        95 May 17 01:01 pilot_heartbeat.json
[2024-05-17 01:02:35] -rw------- 1 boinc boinc      1046 May 17 01:02 memory_monitor_summary.json
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc      8192 May 17 01:02 boinc_mmap_file
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc        28 May 17 01:02 wrapper_checkpoint.txt
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc       532 May 17 01:02 boinc_task_state.xml
[2024-05-17 01:02:35] -rw------- 1 boinc boinc         0 May 17 01:02 agis_ddmendpoints.agis.ALL.json
[2024-05-17 01:02:35] -rw------- 1 boinc boinc    339340 May 17 01:02 log.38776146._001373.job.log.tgz.1
[2024-05-17 01:02:35] -rw------- 1 boinc boinc      7720 May 17 01:02 heartbeat.json
[2024-05-17 01:02:35] -rw------- 1 boinc boinc      4346 May 17 01:02 pilotlog.txt
[2024-05-17 01:02:35] -rw------- 1 boinc boinc   1381264 May 17 01:02 log.38776146._001373.job.log.1
[2024-05-17 01:02:35] -rw------- 1 boinc boinc       357 May 17 01:02 output.list
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc       620 May 17 01:02 runtime_log
[2024-05-17 01:02:35] -rw------- 1 boinc boinc   1740800 May 17 01:02 result.tar.gz
[2024-05-17 01:02:35] -rw------- 1 boinc boinc       659 May 17 01:02 wqHLDmi5eQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmMZGKDmiAMOim.diag
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc     11429 May 17 01:02 runtime_log.err
[2024-05-17 01:02:35] -rw-r--r-- 1 boinc boinc     21362 May 17 01:02 stderr.txt
[2024-05-17 01:02:35] HITS file was successfully produced:
[2024-05-17 01:02:35] -rw------- 1 boinc boinc 278021976 May 17 01:01 shared/HITS.pool.root.1
[2024-05-17 01:02:35]  *** Contents of shared directory: ***
[2024-05-17 01:02:35] total 875636
[2024-05-17 01:02:35] -rw-r--r-- 2 boinc boinc    479985 May 16 21:26 input.tar.gz
[2024-05-17 01:02:35] -rw-r--r-- 2 boinc boinc 616371375 May 16 21:26 ATLAS.root_0
[2024-05-17 01:02:35] -rw-r--r-- 2 boinc boinc     17537 May 16 21:26 start_atlas.sh
[2024-05-17 01:02:35] -rw------- 1 boinc boinc 278021976 May 17 01:01 HITS.pool.root.1
[2024-05-17 01:02:35] -rw------- 1 boinc boinc   1740800 May 17 01:02 result.tar.gz
01:02:37 (2298125): run_atlas exited; CPU time 48689.795569
01:02:37 (2298125): called boinc_finish(0)

</stderr_txt>
]]>

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