Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:40:41 (952604): wrapper (7.7.26015): starting
06:40:41 (952604): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 06:40:41] Arguments: --nthreads 4
[2024-05-15 06:40:41] Threads: 4
[2024-05-15 06:40:41] Checking for CVMFS
[2024-05-15 06:40:41] No cvmfs_config command found, will try listing directly
[2024-05-15 06:40:41] CVMFS is ok
[2024-05-15 06:40:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 06:40:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 06:40:41] Further information can be found at the LHC@home message board.
[2024-05-15 06:40:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 06:40:41] Checking for apptainer binary...
[2024-05-15 06:40:41] which: no apptainer in ((null))
[2024-05-15 06:40:41] apptainer is not installed, using version from CVMFS
[2024-05-15 06:40:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 06:40:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-05-15 06:40:42] apptainer works
[2024-05-15 06:40:42] Set ATHENA_PROC_NUMBER=4
[2024-05-15 06:40:42] Set ATHENA_CORE_NUMBER=4
[2024-05-15 06:40:42] Starting ATLAS job with PandaID=6205819087
[2024-05-15 06:40:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 11:38:52]  *** The last 200 lines of the pilot log: ***
[2024-05-15 11:38:52] 2024-05-15 09:38:30,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-15 11:38:52] 2024-05-15 09:38:30,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 11:38:52] 2024-05-15 09:38:30,088 | INFO     | fitting pss+swap vs Time
[2024-05-15 11:38:52] 2024-05-15 09:38:30,088 | INFO     | model: linear, x: [1715748083.0, 1715748144.0, 1715748205.0, 1715748266.0, 1715748327.0, 1715748388.0, 1715748449.0, 1715748510.0, 1715748571.0, 1715748632.0, 1715
[2024-05-15 11:38:52] 2024-05-15 09:38:30,088 | INFO     | sum of square deviations: 7799669962.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,090 | INFO     | sum of deviations: 110150697418.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,090 | INFO     | mean x: 1715756989.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,090 | INFO     | mean y: 2295392.3651877134
[2024-05-15 11:38:52] 2024-05-15 09:38:30,090 | INFO     | -- intersect: -24228451531.40545
[2024-05-15 11:38:52] 2024-05-15 09:38:30,090 | INFO     | intersect: -24228451531.40545
[2024-05-15 11:38:52] 2024-05-15 09:38:30,090 | INFO     | chi2: 4.792364369631981
[2024-05-15 11:38:52] 2024-05-15 09:38:30,090 | INFO     | model: linear, x: [1715748083.0, 1715748144.0, 1715748205.0, 1715748266.0, 1715748327.0, 1715748388.0, 1715748449.0, 1715748510.0, 1715748571.0, 1715748632.0, 1715
[2024-05-15 11:38:52] 2024-05-15 09:38:30,090 | INFO     | sum of square deviations: 7407141672.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,092 | INFO     | sum of deviations: 126576953769.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,092 | INFO     | mean x: 1715756836.5
[2024-05-15 11:38:52] 2024-05-15 09:38:30,092 | INFO     | mean y: 2301674.284722222
[2024-05-15 11:38:52] 2024-05-15 09:38:30,092 | INFO     | -- intersect: -29317412108.62538
[2024-05-15 11:38:52] 2024-05-15 09:38:30,092 | INFO     | intersect: -29317412108.62538
[2024-05-15 11:38:52] 2024-05-15 09:38:30,092 | INFO     | chi2: 4.009000983065006
[2024-05-15 11:38:52] 2024-05-15 09:38:30,092 | INFO     | current chi2=4.009000983065006 (change=16.346073172794497 %)
[2024-05-15 11:38:52] 2024-05-15 09:38:30,092 | INFO     | right removable region: 287
[2024-05-15 11:38:52] 2024-05-15 09:38:30,092 | INFO     | model: linear, x: [1715748388.0, 1715748449.0, 1715748510.0, 1715748571.0, 1715748632.0, 1715748693.0, 1715748754.0, 1715748815.0, 1715748876.0, 1715748937.0, 1715
[2024-05-15 11:38:52] 2024-05-15 09:38:30,093 | INFO     | sum of square deviations: 7407141672.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,094 | INFO     | sum of deviations: 42786029794.49999
[2024-05-15 11:38:52] 2024-05-15 09:38:30,094 | INFO     | mean x: 1715757141.5
[2024-05-15 11:38:52] 2024-05-15 09:38:30,094 | INFO     | mean y: 2321513.940972222
[2024-05-15 11:38:52] 2024-05-15 09:38:30,094 | INFO     | -- intersect: -9908442911.403631
[2024-05-15 11:38:52] 2024-05-15 09:38:30,094 | INFO     | intersect: -9908442911.403631
[2024-05-15 11:38:52] 2024-05-15 09:38:30,094 | INFO     | chi2: 2.37523901030666
[2024-05-15 11:38:52] 2024-05-15 09:38:30,094 | INFO     | current chi2=2.37523901030666 (change=50.43701131412382 %)
[2024-05-15 11:38:52] 2024-05-15 09:38:30,094 | INFO     | model: linear, x: [1715748693.0, 1715748754.0, 1715748815.0, 1715748876.0, 1715748937.0, 1715748998.0, 1715749059.0, 1715749120.0, 1715749181.0, 1715749242.0, 1715
[2024-05-15 11:38:52] 2024-05-15 09:38:30,095 | INFO     | sum of square deviations: 7028008982.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,096 | INFO     | sum of deviations: -11911234540.000004
[2024-05-15 11:38:52] 2024-05-15 09:38:30,096 | INFO     | mean x: 1715757294.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,096 | INFO     | mean y: 2343515.717314488
[2024-05-15 11:38:52] 2024-05-15 09:38:30,096 | INFO     | -- intersect: 2910249239.0725417
[2024-05-15 11:38:52] 2024-05-15 09:38:30,096 | INFO     | intersect: 2910249239.0725417
[2024-05-15 11:38:52] 2024-05-15 09:38:30,096 | INFO     | chi2: 0.9154218378875956
[2024-05-15 11:38:52] 2024-05-15 09:38:30,096 | INFO     | current chi2=0.9154218378875956 (change=61.459801143573834 %)
[2024-05-15 11:38:52] 2024-05-15 09:38:30,096 | INFO     | model: linear, x: [1715748998.0, 1715749059.0, 1715749120.0, 1715749181.0, 1715749242.0, 1715749303.0, 1715749364.0, 1715749425.0, 1715749486.0, 1715749547.0, 1715
[2024-05-15 11:38:52] 2024-05-15 09:38:30,096 | INFO     | sum of square deviations: 6662039329.5
[2024-05-15 11:38:52] 2024-05-15 09:38:30,098 | INFO     | sum of deviations: -20471438868.5
[2024-05-15 11:38:52] 2024-05-15 09:38:30,098 | INFO     | mean x: 1715757446.5
[2024-05-15 11:38:52] 2024-05-15 09:38:30,098 | INFO     | mean y: 2347043.6223021583
[2024-05-15 11:38:52] 2024-05-15 09:38:30,098 | INFO     | -- intersect: 5274610076.304599
[2024-05-15 11:38:52] 2024-05-15 09:38:30,098 | INFO     | intersect: 5274610076.304599
[2024-05-15 11:38:52] 2024-05-15 09:38:30,098 | INFO     | chi2: 0.8308815809894448
[2024-05-15 11:38:52] 2024-05-15 09:38:30,098 | INFO     | current chi2=0.8308815809894448 (change=9.235114719704937 %)
[2024-05-15 11:38:52] 2024-05-15 09:38:30,098 | INFO     | left removable region: 30
[2024-05-15 11:38:52] 2024-05-15 09:38:30,098 | INFO     | model: linear, x: [1715749913.0, 1715749974.0, 1715750035.0, 1715750096.0, 1715750157.0, 1715750218.0, 1715750279.0, 1715750340.0, 1715750401.0, 1715750462.0, 1715
[2024-05-15 11:38:52] 2024-05-15 09:38:30,099 | INFO     | sum of square deviations: 5263458688.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,100 | INFO     | sum of deviations: 4371491616.999996
[2024-05-15 11:38:52] 2024-05-15 09:38:30,100 | INFO     | mean x: 1715757721.0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,100 | INFO     | mean y: 2351270.2178988326
[2024-05-15 11:38:52] 2024-05-15 09:38:30,100 | INFO     | -- intersect: -1422647183.983803
[2024-05-15 11:38:52] 2024-05-15 09:38:30,100 | INFO     | intersect: -1422647183.983803
[2024-05-15 11:38:52] 2024-05-15 09:38:30,100 | INFO     | chi2: 0.0047683861132401945
[2024-05-15 11:38:52] 2024-05-15 09:38:30,100 | INFO     | -- intersect: -1422647183.983803
[2024-05-15 11:38:52] 2024-05-15 09:38:30,100 | INFO     | current memory leak: 0.83 B/s (using 257 data points, chi2=0.00)
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | ..............................
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | . Timing measurements:
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | . get job = 0 s
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | . initial setup = 1 s
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | . payload setup = 6 s
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | . stage-in = 0 s
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | . payload execution = 17818 s
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | . stage-out = 0 s
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | . log creation = 0 s
[2024-05-15 11:38:52] 2024-05-15 09:38:30,101 | INFO     | ..............................
[2024-05-15 11:38:52] 2024-05-15 09:38:30,600 | INFO     | 
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | job summary report
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | --------------------------------------------------
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | PanDA job id: 6205819087
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | task id: 38776146
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | errors: (none)
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | pilot state: finished 
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | transexitcode: 0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | exeerrorcode: 0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | exeerrordiag: 
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | exitcode: 0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | exitmsg: OK
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | cpuconsumptiontime: 68412 s
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | nevents: 400
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | neventsw: 0
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | pid: 964536
[2024-05-15 11:38:52] 2024-05-15 09:38:30,601 | INFO     | pgrp: 964536
[2024-05-15 11:38:52] 2024-05-15 09:38:30,602 | INFO     | corecount: 4
[2024-05-15 11:38:52] 2024-05-15 09:38:30,602 | INFO     | event service: False
[2024-05-15 11:38:52] 2024-05-15 09:38:30,602 | INFO     | sizes: {0: 2394487, 5: 2394693, 11: 2394749, 17829: 2426965, 17831: 2435947, 17833: 2436003, 17839: 2436301}
[2024-05-15 11:38:52] 2024-05-15 09:38:30,602 | INFO     | --------------------------------------------------
[2024-05-15 11:38:52] 2024-05-15 09:38:30,602 | INFO     | 
[2024-05-15 11:38:52] 2024-05-15 09:38:30,602 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | job 6205819087 has completed (purged errors)
[2024-05-15 11:38:52] 2024-05-15 09:38:30,623 | INFO     | overall cleanup function is called
[2024-05-15 11:38:52] 2024-05-15 09:38:31,630 | INFO     | --- collectZombieJob: --- 10, [964536]
[2024-05-15 11:38:52] 2024-05-15 09:38:31,631 | INFO     | zombie collector waiting for pid 964536
[2024-05-15 11:38:52] 2024-05-15 09:38:31,631 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 11:38:52] 2024-05-15 09:38:32,636 | INFO     | collected zombie processes
[2024-05-15 11:38:52] 2024-05-15 09:38:32,636 | INFO     | will now attempt to kill all subprocesses of pid=964536
[2024-05-15 11:38:52] 2024-05-15 09:38:32,813 | INFO     | process IDs to be killed: [964536] (in reverse order)
[2024-05-15 11:38:52] 2024-05-15 09:38:32,915 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 11:38:52] 2024-05-15 09:38:32,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 11:38:52] 2024-05-15 09:38:32,922 | INFO     | did not find any defunct processes belonging to 964536
[2024-05-15 11:38:52] 2024-05-15 09:38:32,928 | INFO     | did not find any defunct processes belonging to 964536
[2024-05-15 11:38:52] 2024-05-15 09:38:32,929 | INFO     | ready for new job
[2024-05-15 11:38:52] 2024-05-15 09:38:32,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 11:38:52] 2024-05-15 09:38:32,931 | INFO     | *************************************
[2024-05-15 11:38:52] 2024-05-15 09:38:32,931 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 11:38:52] 2024-05-15 09:38:32,931 | INFO     | *************************************
[2024-05-15 11:38:52] 2024-05-15 09:38:32,931 | INFO     | 
[2024-05-15 11:38:52] 2024-05-15 09:38:32,933 | INFO     | architecture information:
[2024-05-15 11:38:52] 2024-05-15 09:38:32,934 | INFO     | executing command: cat /etc/os-release
[2024-05-15 11:38:52] 2024-05-15 09:38:32,946 | INFO     | cat /etc/os-release:
[2024-05-15 11:38:52] NAME="CentOS Linux"
[2024-05-15 11:38:52] VERSION="7 (Core)"
[2024-05-15 11:38:52] ID="centos"
[2024-05-15 11:38:52] ID_LIKE="rhel fedora"
[2024-05-15 11:38:52] VERSION_ID="7"
[2024-05-15 11:38:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 11:38:52] ANSI_COLOR="0;31"
[2024-05-15 11:38:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 11:38:52] HOME_URL="https://www.centos.org/"
[2024-05-15 11:38:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 11:38:52] 
[2024-05-15 11:38:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 11:38:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 11:38:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 11:38:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 11:38:52] 
[2024-05-15 11:38:52] 2024-05-15 09:38:32,946 | INFO     | *************************************
[2024-05-15 11:38:52] 2024-05-15 09:38:33,449 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-05-15 11:38:52] 2024-05-15 09:38:33,468 | INFO     | sufficient remaining disk space (581463703552 B)
[2024-05-15 11:38:52] 2024-05-15 09:38:33,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 11:38:52] 2024-05-15 09:38:33,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 11:38:52] 2024-05-15 09:38:33,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:38:52] 2024-05-15 09:38:33,469 | INFO     | aborting loop
[2024-05-15 11:38:52] 2024-05-15 09:38:33,797 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 11:38:52] 2024-05-15 09:38:33,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 11:38:52] 2024-05-15 09:38:33,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 11:38:52] 2024-05-15 09:38:34,372 | INFO     | all data control threads have been joined
[2024-05-15 11:38:52] 2024-05-15 09:38:34,386 | INFO     | all payload control threads have been joined
[2024-05-15 11:38:52] 2024-05-15 09:38:34,473 | INFO     | [job] retrieve thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:34,475 | INFO     | [job] job monitor thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:34,552 | INFO     | [payload] failed_post thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:34,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 11:38:52] 2024-05-15 09:38:34,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 11:38:52] 2024-05-15 09:38:34,768 | INFO     | [data] copytool_in thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:34,782 | INFO     | [job] validate thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:34,791 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:34,871 | INFO     | all job control threads have been joined
[2024-05-15 11:38:52] 2024-05-15 09:38:35,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:38:52] 2024-05-15 09:38:35,377 | INFO     | [data] control thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:35,391 | INFO     | [payload] control thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:35,572 | INFO     | [payload] validate_post thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:35,613 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:35,706 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:35,876 | INFO     | [job] control thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:36,171 | INFO     | [job] queue monitor thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:36,708 | INFO     | [data] copytool_out thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:38,668 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:44,508 | INFO     | job.realtimelogging is not enabled
[2024-05-15 11:38:52] 2024-05-15 09:38:45,513 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 11:38:52] 2024-05-15 09:38:46,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47332462126144)>', '<ExcThread(monitor, started 47332705994496)>']
[2024-05-15 11:38:52] 2024-05-15 09:38:46,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 11:38:52] 2024-05-15 09:38:46,857 | INFO     | [monitor] control thread has ended
[2024-05-15 11:38:52] 2024-05-15 09:38:51,169 | INFO     | all workflow threads have been joined
[2024-05-15 11:38:52] 2024-05-15 09:38:51,169 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 11:38:52] 2024-05-15 09:38:51,170 | INFO     | traces error code: 0
[2024-05-15 11:38:52] 2024-05-15 09:38:51,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 11:38:52] 2024-05-15 09:38:51,245 [wrapper] ==== pilot stdout END ====
[2024-05-15 11:38:52] 2024-05-15 09:38:51,248 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 11:38:52] 2024-05-15 09:38:51,250 [wrapper] pilotpid: 957121
[2024-05-15 11:38:52] 2024-05-15 09:38:51,252 [wrapper] Pilot exit status: 0
[2024-05-15 11:38:52] 2024-05-15 09:38:51,260 [wrapper] pandaids: 6205819087
[2024-05-15 11:38:52] 2024-05-15 09:38:51,332 [wrapper] cleanup: SIGTERM to supervisor_pilot 1596572 957122
[2024-05-15 11:38:52] 2024-05-15 09:38:51,334 [wrapper] Test setup, not cleaning
[2024-05-15 11:38:52] 2024-05-15 09:38:51,336 [wrapper] ==== wrapper stdout END ====
[2024-05-15 11:38:52] 2024-05-15 09:38:51,338 [wrapper] ==== wrapper stderr END ====
[2024-05-15 11:38:52] 2024-05-15 09:38:51,342 [wrapper] apfmon messages muted
[2024-05-15 11:38:52]  *** Error codes and diagnostics ***
[2024-05-15 11:38:52]     "exeErrorCode": 0,
[2024-05-15 11:38:52]     "exeErrorDiag": "",
[2024-05-15 11:38:52]     "pilotErrorCode": 0,
[2024-05-15 11:38:52]     "pilotErrorDiag": "",
[2024-05-15 11:38:52]  *** Listing of results directory ***
[2024-05-15 11:38:52] total 874852
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc    467845 May 13 08:49 pilot3.tar.gz
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc      5633 May 13 09:13 queuedata.json
[2024-05-15 11:38:52] -rwx------ 1 boinc boinc     32251 May 13 09:14 runpilot2-wrapper.sh
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc       100 May 15 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 11:38:52] -rwxr-xr-x 1 boinc boinc      7986 May 15 06:40 run_atlas
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc       105 May 15 06:40 job.xml
[2024-05-15 11:38:52] -rw-r--r-- 2 boinc boinc 614949360 May 15 06:40 EVNT.38776140._000038.pool.root.1
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc      6663 May 15 06:40 init_data.xml
[2024-05-15 11:38:52] -rw-r--r-- 2 boinc boinc     17537 May 15 06:40 start_atlas.sh
[2024-05-15 11:38:52] drwxrwx--x 2 boinc boinc      4096 May 15 06:40 shared
[2024-05-15 11:38:52] -rw-r--r-- 2 boinc boinc    479993 May 15 06:40 input.tar.gz
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc         0 May 15 06:40 boinc_lockfile
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc      2612 May 15 06:40 pandaJob.out
[2024-05-15 11:38:52] -rw------- 1 boinc boinc       424 May 15 06:40 setup.sh.local
[2024-05-15 11:38:52] -rw------- 1 boinc boinc   1007816 May 15 06:40 agis_schedconf.cvmfs.json
[2024-05-15 11:38:52] -rw------- 1 boinc boinc   1324588 May 15 06:40 cric_ddmendpoints.json
[2024-05-15 11:38:52] drwx------ 4 boinc boinc      4096 May 15 06:40 pilot3
[2024-05-15 11:38:52] -rw------- 1 boinc boinc 272755488 May 15 11:37 HITS.38776146._000952.pool.root.1
[2024-05-15 11:38:52] -rw------- 1 boinc boinc        95 May 15 11:37 pilot_heartbeat.json
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc       531 May 15 11:37 boinc_task_state.xml
[2024-05-15 11:38:52] -rw------- 1 boinc boinc      1049 May 15 11:38 memory_monitor_summary.json
[2024-05-15 11:38:52] -rw------- 1 boinc boinc         0 May 15 11:38 agis_ddmendpoints.agis.ALL.json
[2024-05-15 11:38:52] -rw------- 1 boinc boinc    389299 May 15 11:38 log.38776146._000952.job.log.tgz.1
[2024-05-15 11:38:52] -rw------- 1 boinc boinc      7763 May 15 11:38 heartbeat.json
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc      8192 May 15 11:38 boinc_mmap_file
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc        28 May 15 11:38 wrapper_checkpoint.txt
[2024-05-15 11:38:52] -rw------- 1 boinc boinc      4293 May 15 11:38 pilotlog.txt
[2024-05-15 11:38:52] -rw------- 1 boinc boinc   1919946 May 15 11:38 log.38776146._000952.job.log.1
[2024-05-15 11:38:52] -rw------- 1 boinc boinc       357 May 15 11:38 output.list
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc       620 May 15 11:38 runtime_log
[2024-05-15 11:38:52] -rw------- 1 boinc boinc   2324480 May 15 11:38 result.tar.gz
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc     11410 May 15 11:38 runtime_log.err
[2024-05-15 11:38:52] -rw------- 1 boinc boinc       658 May 15 11:38 b70NDmv3eQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmyXGKDmOjG4mn.diag
[2024-05-15 11:38:52] -rw-r--r-- 1 boinc boinc     21263 May 15 11:38 stderr.txt
[2024-05-15 11:38:52] HITS file was successfully produced:
[2024-05-15 11:38:52] -rw------- 1 boinc boinc 272755488 May 15 11:37 shared/HITS.pool.root.1
[2024-05-15 11:38:52]  *** Contents of shared directory: ***
[2024-05-15 11:38:52] total 869676
[2024-05-15 11:38:52] -rw-r--r-- 2 boinc boinc 614949360 May 15 06:40 ATLAS.root_0
[2024-05-15 11:38:52] -rw-r--r-- 2 boinc boinc     17537 May 15 06:40 start_atlas.sh
[2024-05-15 11:38:52] -rw-r--r-- 2 boinc boinc    479993 May 15 06:40 input.tar.gz
[2024-05-15 11:38:52] -rw------- 1 boinc boinc 272755488 May 15 11:37 HITS.pool.root.1
[2024-05-15 11:38:52] -rw------- 1 boinc boinc   2324480 May 15 11:38 result.tar.gz
11:38:53 (952604): run_atlas exited; CPU time 68033.211740
11:38:53 (952604): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN