Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
14:38:19 (256650): wrapper (7.7.26015): starting
14:38:19 (256650): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 14:38:19] Arguments: --nthreads 12
[2024-05-17 14:38:19] Threads: 12
[2024-05-17 14:38:19] Checking for CVMFS
[2024-05-17 14:38:19] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 14:38:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 14:38:19] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 14:38:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 14:38:19] 2.10.1.0 2829 172769 154932 132855 3 351 37011165 45568000 14420 130560 0 1042319614 99.759 646539242 19041 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-17 14:38:19] CVMFS is ok
[2024-05-17 14:38:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 14:38:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 14:38:19] Further information can be found at the LHC@home message board.
[2024-05-17 14:38:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 14:38:19] Checking for apptainer binary...
[2024-05-17 14:38:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 14:38:19] Running /usr/bin/apptainer --version
[2024-05-17 14:38:19] apptainer version 1.1.8-1.el7
[2024-05-17 14:38:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 14:38:21] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0139.triumf.lcg
[2024-05-17 14:38:21] apptainer works
[2024-05-17 14:38:21] Set ATHENA_PROC_NUMBER=12
[2024-05-17 14:38:21] Set ATHENA_CORE_NUMBER=12
[2024-05-17 14:38:21] Starting ATLAS job with PandaID=6205818515
[2024-05-17 14:38:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 16:13:56]  *** The last 200 lines of the pilot log: ***
[2024-05-17 16:13:56]  guid=a41ad421-af86-4598-a95e-b57f412d4efa
[2024-05-17 16:13:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 16:13:56]  is_tar=False
[2024-05-17 16:13:56]  lfn=log.38776146._000720.job.log.tgz.1
[2024-05-17 16:13:56]  mtime=0
[2024-05-17 16:13:56]  protocol_id=None
[2024-05-17 16:13:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 16:13:56]  replicas=None
[2024-05-17 16:13:56]  scope=mc23_13p6TeV
[2024-05-17 16:13:56]  status=None
[2024-05-17 16:13:56]  status_code=0
[2024-05-17 16:13:56]  storage_token=
[2024-05-17 16:13:56]  surl=/home/boinc/slots/0/PanDA_Pilot-6205818515/log.38776146._000720.job.log.tgz.1
[2024-05-17 16:13:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/aa/log.38776146._000720.job.log.tgz.1
[2024-05-17 16:13:56]  workdir=None
[2024-05-17 16:13:56] ]
[2024-05-17 16:13:56] 2024-05-17 23:13:32,704 | INFO     | transferring file log.38776146._000720.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6205818515/log.38776146._000720.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 16:13:56] 2024-05-17 23:13:32,705 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6205818515/log.38776146._000720.job.log.tgz.1 /home/boinc/slots/0/log.38776146._000720.job.log.t
[2024-05-17 16:13:56] 2024-05-17 23:13:32,795 | WARNING  | process 267416 is no longer using CPU - aborting
[2024-05-17 16:13:56] 2024-05-17 23:13:32,795 | INFO     | will not send any job update
[2024-05-17 16:13:56] 2024-05-17 23:13:32,825 | INFO     | adding to output.list: log.38776146._000720.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/aa/log.38776146._000720.job.log.tg
[2024-05-17 16:13:56] 2024-05-17 23:13:32,826 | INFO     | summary of transferred files:
[2024-05-17 16:13:56] 2024-05-17 23:13:32,826 | INFO     |  -- lfn=log.38776146._000720.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 16:13:56] 2024-05-17 23:13:32,827 | INFO     | stage-out finished correctly
[2024-05-17 16:13:56] 2024-05-17 23:13:32,915 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 16:13:56] 2024-05-17 23:13:35,297 | INFO     | monitor loop #434: job 0:6205818515 is in state 'finished'
[2024-05-17 16:13:56] 2024-05-17 23:13:35,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 16:13:56] 2024-05-17 23:13:35,855 | INFO     | job 6205818515 has state=finished
[2024-05-17 16:13:56] 2024-05-17 23:13:35,855 | INFO     | preparing for final server update for job 6205818515 in state='finished'
[2024-05-17 16:13:56] 2024-05-17 23:13:35,855 | INFO     | this job has now completed (state=finished)
[2024-05-17 16:13:56] 2024-05-17 23:13:35,855 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 16:13:56] 2024-05-17 23:13:35,856 | INFO     | job 6205818515 has finished - writing final server update
[2024-05-17 16:13:56] 2024-05-17 23:13:35,856 | INFO     | total number of processed events: 400 (read)
[2024-05-17 16:13:56] 2024-05-17 23:13:35,859 | INFO     | executing command: lscpu
[2024-05-17 16:13:56] 2024-05-17 23:13:35,918 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 16:13:56] 2024-05-17 23:13:35,918 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 16:13:56] 2024-05-17 23:13:35,974 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 16:13:56] 2024-05-17 23:13:37,800 | INFO     | monitor loop #435: job 0:6205818515 is in state 'finished'
[2024-05-17 16:13:56] 2024-05-17 23:13:37,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 16:13:56] 2024-05-17 23:13:39,763 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 16:13:56] 2024-05-17 23:13:39,763 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6205818515/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 16:13:56] 2024-05-17 23:13:39,764 | INFO     | extracted standard info from prmon json
[2024-05-17 16:13:56] 2024-05-17 23:13:39,764 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 16:13:56] 2024-05-17 23:13:39,764 | WARNING  | GPU info not found in prmon json
[2024-05-17 16:13:56] 2024-05-17 23:13:39,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 16:13:56] 2024-05-17 23:13:39,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 16:13:56] 2024-05-17 23:13:39,766 | INFO     | fitting pss+swap vs Time
[2024-05-17 16:13:56] 2024-05-17 23:13:39,766 | INFO     | model: linear, x: [1715982242.0, 1715982303.0, 1715982364.0, 1715982425.0, 1715982486.0, 1715982547.0, 1715982608.0, 1715982669.0, 1715982730.0, 1715982791.0, 1715
[2024-05-17 16:13:56] 2024-05-17 23:13:39,766 | INFO     | sum of square deviations: 197203697.5
[2024-05-17 16:13:56] 2024-05-17 23:13:39,767 | INFO     | sum of deviations: 24542216558.999996
[2024-05-17 16:13:56] 2024-05-17 23:13:39,767 | INFO     | mean x: 1715984834.5
[2024-05-17 16:13:56] 2024-05-17 23:13:39,767 | INFO     | mean y: 2655918.534883721
[2024-05-17 16:13:56] 2024-05-17 23:13:39,767 | INFO     | -- intersect: -213553539802.68768
[2024-05-17 16:13:56] 2024-05-17 23:13:39,767 | INFO     | intersect: -213553539802.68768
[2024-05-17 16:13:56] 2024-05-17 23:13:39,767 | INFO     | chi2: 2.3730716737490787
[2024-05-17 16:13:56] 2024-05-17 23:13:39,767 | INFO     | -- intersect: -213553539802.68768
[2024-05-17 16:13:56] 2024-05-17 23:13:39,767 | INFO     | current memory leak: 124.45 B/s (using 86 data points, chi2=2.37)
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | ..............................
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | . Timing measurements:
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | . get job = 0 s
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | . initial setup = 2 s
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | . payload setup = 5 s
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | . stage-in = 0 s
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | . payload execution = 5675 s
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | . stage-out = 1 s
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | . log creation = 0 s
[2024-05-17 16:13:56] 2024-05-17 23:13:39,768 | INFO     | ..............................
[2024-05-17 16:13:56] 2024-05-17 23:13:39,843 | INFO     | 
[2024-05-17 16:13:56] 2024-05-17 23:13:39,843 | INFO     | job summary report
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | --------------------------------------------------
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | PanDA job id: 6205818515
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | task id: 38776146
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | errors: (none)
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | pilot state: finished 
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | transexitcode: 0
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | exeerrorcode: 0
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | exeerrordiag: 
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | exitcode: 0
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | exitmsg: OK
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | cpuconsumptiontime: 53200 s
[2024-05-17 16:13:56] 2024-05-17 23:13:39,844 | INFO     | nevents: 400
[2024-05-17 16:13:56] 2024-05-17 23:13:39,845 | INFO     | neventsw: 0
[2024-05-17 16:13:56] 2024-05-17 23:13:39,845 | INFO     | pid: 267416
[2024-05-17 16:13:56] 2024-05-17 23:13:39,845 | INFO     | pgrp: 267416
[2024-05-17 16:13:56] 2024-05-17 23:13:39,845 | INFO     | corecount: 12
[2024-05-17 16:13:56] 2024-05-17 23:13:39,845 | INFO     | event service: False
[2024-05-17 16:13:56] 2024-05-17 23:13:39,845 | INFO     | sizes: {0: 2392166, 4: 2392372, 11: 2392400, 5684: 2419011, 5685: 2428021, 5692: 2428135}
[2024-05-17 16:13:56] 2024-05-17 23:13:39,845 | INFO     | --------------------------------------------------
[2024-05-17 16:13:56] 2024-05-17 23:13:39,845 | INFO     | 
[2024-05-17 16:13:56] 2024-05-17 23:13:39,845 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 16:13:56] 2024-05-17 23:13:39,873 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,873 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,873 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,873 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 16:13:56] 2024-05-17 23:13:39,874 | INFO     | job 6205818515 has completed (purged errors)
[2024-05-17 16:13:56] 2024-05-17 23:13:39,875 | INFO     | overall cleanup function is called
[2024-05-17 16:13:56] 2024-05-17 23:13:40,882 | INFO     | --- collectZombieJob: --- 10, [267416]
[2024-05-17 16:13:56] 2024-05-17 23:13:40,882 | INFO     | zombie collector waiting for pid 267416
[2024-05-17 16:13:56] 2024-05-17 23:13:40,883 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 16:13:56] 2024-05-17 23:13:41,886 | INFO     | collected zombie processes
[2024-05-17 16:13:56] 2024-05-17 23:13:41,886 | INFO     | will now attempt to kill all subprocesses of pid=267416
[2024-05-17 16:13:56] 2024-05-17 23:13:42,068 | INFO     | process IDs to be killed: [267416] (in reverse order)
[2024-05-17 16:13:56] 2024-05-17 23:13:42,195 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 16:13:56] 2024-05-17 23:13:42,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 16:13:56] 2024-05-17 23:13:42,203 | INFO     | did not find any defunct processes belonging to 267416
[2024-05-17 16:13:56] 2024-05-17 23:13:42,209 | INFO     | did not find any defunct processes belonging to 267416
[2024-05-17 16:13:56] 2024-05-17 23:13:42,209 | INFO     | ready for new job
[2024-05-17 16:13:56] 2024-05-17 23:13:42,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 16:13:56] 2024-05-17 23:13:42,211 | INFO     | *************************************
[2024-05-17 16:13:56] 2024-05-17 23:13:42,211 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 16:13:56] 2024-05-17 23:13:42,211 | INFO     | *************************************
[2024-05-17 16:13:56] 2024-05-17 23:13:42,211 | INFO     | 
[2024-05-17 16:13:56] 2024-05-17 23:13:42,214 | INFO     | architecture information:
[2024-05-17 16:13:56] 2024-05-17 23:13:42,214 | INFO     | executing command: cat /etc/os-release
[2024-05-17 16:13:56] 2024-05-17 23:13:42,230 | INFO     | cat /etc/os-release:
[2024-05-17 16:13:56] NAME="CentOS Linux"
[2024-05-17 16:13:56] VERSION="7 (Core)"
[2024-05-17 16:13:56] ID="centos"
[2024-05-17 16:13:56] ID_LIKE="rhel fedora"
[2024-05-17 16:13:56] VERSION_ID="7"
[2024-05-17 16:13:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 16:13:56] ANSI_COLOR="0;31"
[2024-05-17 16:13:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 16:13:56] HOME_URL="https://www.centos.org/"
[2024-05-17 16:13:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 16:13:56] 
[2024-05-17 16:13:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 16:13:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 16:13:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 16:13:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 16:13:56] 
[2024-05-17 16:13:56] 2024-05-17 23:13:42,230 | INFO     | *************************************
[2024-05-17 16:13:56] 2024-05-17 23:13:42,733 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 16:13:56] 2024-05-17 23:13:42,756 | INFO     | sufficient remaining disk space (1829929746432 B)
[2024-05-17 16:13:56] 2024-05-17 23:13:42,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 16:13:56] 2024-05-17 23:13:42,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 16:13:56] 2024-05-17 23:13:42,757 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 16:13:56] 2024-05-17 23:13:42,757 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 16:13:56] 2024-05-17 23:13:42,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 16:13:56] 2024-05-17 23:13:42,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 16:13:56] 2024-05-17 23:13:42,798 | INFO     | all data control threads have been joined
[2024-05-17 16:13:56] 2024-05-17 23:13:42,813 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-17 16:13:56] 2024-05-17 23:13:42,814 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-17 16:13:56] 2024-05-17 23:13:42,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 16:13:56] 2024-05-17 23:13:42,814 | INFO     | will abort loop
[2024-05-17 16:13:56] 2024-05-17 23:13:43,049 | INFO     | all payload control threads have been joined
[2024-05-17 16:13:56] 2024-05-17 23:13:43,175 | INFO     | all job control threads have been joined
[2024-05-17 16:13:56] 2024-05-17 23:13:43,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 16:13:56] 2024-05-17 23:13:43,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 16:13:56] 2024-05-17 23:13:43,761 | INFO     | [job] retrieve thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:43,800 | INFO     | [data] control thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:43,815 | INFO     | [job] job monitor thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:43,866 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:43,904 | INFO     | [payload] validate_post thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:44,054 | INFO     | [payload] control thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:44,110 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:44,181 | INFO     | [job] control thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:44,472 | INFO     | [job] validate thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:44,621 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:44,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 16:13:56] 2024-05-17 23:13:44,858 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:44,929 | INFO     | [payload] failed_post thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:45,246 | INFO     | [data] copytool_in thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:45,437 | INFO     | [data] copytool_out thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:45,850 | INFO     | [job] queue monitor thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:47,511 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 16:13:56] 2024-05-17 23:13:49,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126470072128)>', '<ExcThread(monitor, started 140125900097280)>']
[2024-05-17 16:13:56] 2024-05-17 23:13:49,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 16:13:56] 2024-05-17 23:13:49,778 | INFO     | [monitor] control thread has ended
[2024-05-17 16:13:56] 2024-05-17 23:13:54,519 | INFO     | all workflow threads have been joined
[2024-05-17 16:13:56] 2024-05-17 23:13:54,519 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 16:13:56] 2024-05-17 23:13:54,519 | INFO     | traces error code: 0
[2024-05-17 16:13:56] 2024-05-17 23:13:54,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 16:13:56] 2024-05-17 23:13:54,619 [wrapper] ==== pilot stdout END ====
[2024-05-17 16:13:56] 2024-05-17 23:13:54,622 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 16:13:56] 2024-05-17 23:13:54,625 [wrapper] pilotpid: 260856
[2024-05-17 16:13:56] 2024-05-17 23:13:54,627 [wrapper] Pilot exit status: 0
[2024-05-17 16:13:56] 2024-05-17 23:13:54,638 [wrapper] pandaids: 6205818515
[2024-05-17 16:13:56] 2024-05-17 23:13:54,718 [wrapper] cleanup: SIGTERM to supervisor_pilot 141586 260857
[2024-05-17 16:13:56] 2024-05-17 23:13:54,721 [wrapper] Test setup, not cleaning
[2024-05-17 16:13:56] 2024-05-17 23:13:54,724 [wrapper] ==== wrapper stdout END ====
[2024-05-17 16:13:56] 2024-05-17 23:13:54,727 [wrapper] ==== wrapper stderr END ====
[2024-05-17 16:13:56] 2024-05-17 23:13:54,732 [wrapper] apfmon messages muted
[2024-05-17 16:13:56]  *** Error codes and diagnostics ***
[2024-05-17 16:13:56]     "exeErrorCode": 0,
[2024-05-17 16:13:56]     "exeErrorDiag": "",
[2024-05-17 16:13:56]     "pilotErrorCode": 0,
[2024-05-17 16:13:56]     "pilotErrorDiag": "",
[2024-05-17 16:13:56]  *** Listing of results directory ***
[2024-05-17 16:13:56] total 875568
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc    467845 May 12 23:49 pilot3.tar.gz
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc      5633 May 13 00:10 queuedata.json
[2024-05-17 16:13:56] -rwx------ 1 boinc boinc     32251 May 13 00:10 runpilot2-wrapper.sh
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc       100 May 17 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 16:13:56] -rwxr-xr-x 1 boinc boinc      7986 May 17 14:38 run_atlas
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc       105 May 17 14:38 job.xml
[2024-05-17 16:13:56] -rw-r--r-- 2 boinc boinc 614729454 May 17 14:38 EVNT.38776140._000029.pool.root.1
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc      6622 May 17 14:38 init_data.xml
[2024-05-17 16:13:56] drwxrwx--x 2 boinc boinc      4096 May 17 14:38 shared
[2024-05-17 16:13:56] -rw-r--r-- 2 boinc boinc    479990 May 17 14:38 input.tar.gz
[2024-05-17 16:13:56] -rw-r--r-- 2 boinc boinc     17537 May 17 14:38 start_atlas.sh
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc         0 May 17 14:38 boinc_lockfile
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc      2611 May 17 14:38 pandaJob.out
[2024-05-17 16:13:56] -rw------- 1 boinc boinc       424 May 17 14:38 setup.sh.local
[2024-05-17 16:13:56] -rw------- 1 boinc boinc   1019089 May 17 14:38 agis_schedconf.cvmfs.json
[2024-05-17 16:13:56] -rw------- 1 boinc boinc         0 May 17 14:38 agis_ddmendpoints.agis.ALL.json
[2024-05-17 16:13:56] -rw------- 1 boinc boinc   1324701 May 17 14:38 cric_ddmendpoints.json
[2024-05-17 16:13:56] drwx------ 4 boinc boinc      4096 May 17 14:38 pilot3
[2024-05-17 16:13:56] -rw------- 1 boinc boinc 276477218 May 17 16:12 HITS.38776146._000720.pool.root.1
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc       531 May 17 16:12 boinc_task_state.xml
[2024-05-17 16:13:56] -rw------- 1 boinc boinc        95 May 17 16:12 pilot_heartbeat.json
[2024-05-17 16:13:56] -rw------- 1 boinc boinc      1065 May 17 16:13 memory_monitor_summary.json
[2024-05-17 16:13:56] -rw------- 1 boinc boinc    375497 May 17 16:13 log.38776146._000720.job.log.tgz.1
[2024-05-17 16:13:56] -rw------- 1 boinc boinc      7782 May 17 16:13 heartbeat.json
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc        27 May 17 16:13 wrapper_checkpoint.txt
[2024-05-17 16:13:56] -rw------- 1 boinc boinc      4519 May 17 16:13 pilotlog.txt
[2024-05-17 16:13:56] -rw------- 1 boinc boinc    542847 May 17 16:13 log.38776146._000720.job.log.1
[2024-05-17 16:13:56] -rw------- 1 boinc boinc       357 May 17 16:13 output.list
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc       620 May 17 16:13 runtime_log
[2024-05-17 16:13:56] -rw------- 1 boinc boinc    942080 May 17 16:13 result.tar.gz
[2024-05-17 16:13:56] -rw------- 1 boinc boinc       654 May 17 16:13 wuOODmr0eQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm5VGKDmhrfRDm.diag
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc     11286 May 17 16:13 runtime_log.err
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc      8192 May 17 16:13 boinc_mmap_file
[2024-05-17 16:13:56] -rw-r--r-- 1 boinc boinc     21746 May 17 16:13 stderr.txt
[2024-05-17 16:13:56] HITS file was successfully produced:
[2024-05-17 16:13:56] -rw------- 1 boinc boinc 276477218 May 17 16:12 shared/HITS.pool.root.1
[2024-05-17 16:13:56]  *** Contents of shared directory: ***
[2024-05-17 16:13:56] total 871744
[2024-05-17 16:13:56] -rw-r--r-- 2 boinc boinc 614729454 May 17 14:38 ATLAS.root_0
[2024-05-17 16:13:56] -rw-r--r-- 2 boinc boinc    479990 May 17 14:38 input.tar.gz
[2024-05-17 16:13:56] -rw-r--r-- 2 boinc boinc     17537 May 17 14:38 start_atlas.sh
[2024-05-17 16:13:56] -rw------- 1 boinc boinc 276477218 May 17 16:12 HITS.pool.root.1
[2024-05-17 16:13:56] -rw------- 1 boinc boinc    942080 May 17 16:13 result.tar.gz
16:13:57 (256650): run_atlas exited; CPU time 52936.226920
16:13:57 (256650): called boinc_finish(0)

</stderr_txt>
]]>

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