Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
03:16:12 (43047): wrapper (7.7.26015): starting
03:16:12 (43047): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 03:16:12] Arguments: --nthreads 12
[2024-05-17 03:16:12] Threads: 12
[2024-05-17 03:16:12] Checking for CVMFS
[2024-05-17 03:16:12] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 03:16:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 03:16:12] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 03:16:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 03:16:13] 2.10.1.0 2076 13867664 145924 132836 2 264 44339595 45568000 14379 130560 0 427352349 99.749 289687372 18415 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 03:16:13] CVMFS is ok
[2024-05-17 03:16:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 03:16:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 03:16:13] Further information can be found at the LHC@home message board.
[2024-05-17 03:16:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 03:16:13] Checking for apptainer binary...
[2024-05-17 03:16:13] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 03:16:13] Running /usr/bin/apptainer --version
[2024-05-17 03:16:13] apptainer version 1.1.8-1.el7
[2024-05-17 03:16:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 03:16:14] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0155.triumf.lcg
[2024-05-17 03:16:14] apptainer works
[2024-05-17 03:16:14] Set ATHENA_PROC_NUMBER=12
[2024-05-17 03:16:14] Set ATHENA_CORE_NUMBER=12
[2024-05-17 03:16:14] Starting ATLAS job with PandaID=6205813932
[2024-05-17 03:16:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 04:53:22]  *** The last 200 lines of the pilot log: ***
[2024-05-17 04:53:22]  filesize=371939
[2024-05-17 04:53:22]  filetype=log
[2024-05-17 04:53:22]  guid=6e9b3dc1-6267-43e3-824b-7d4e607b1057
[2024-05-17 04:53:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 04:53:22]  is_tar=False
[2024-05-17 04:53:22]  lfn=log.38776125._003782.job.log.tgz.1
[2024-05-17 04:53:22]  mtime=0
[2024-05-17 04:53:22]  protocol_id=None
[2024-05-17 04:53:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 04:53:22]  replicas=None
[2024-05-17 04:53:22]  scope=mc23_13p6TeV
[2024-05-17 04:53:22]  status=None
[2024-05-17 04:53:22]  status_code=0
[2024-05-17 04:53:22]  storage_token=
[2024-05-17 04:53:22]  surl=/home/boinc/slots/0/PanDA_Pilot-6205813932/log.38776125._003782.job.log.tgz.1
[2024-05-17 04:53:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/ee/log.38776125._003782.job.log.tgz.1
[2024-05-17 04:53:22]  workdir=None
[2024-05-17 04:53:22] ]
[2024-05-17 04:53:22] 2024-05-17 11:52:55,815 | INFO     | transferring file log.38776125._003782.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6205813932/log.38776125._003782.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 04:53:22] 2024-05-17 11:52:55,815 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6205813932/log.38776125._003782.job.log.tgz.1 /home/boinc/slots/0/log.38776125._003782.job.log.t
[2024-05-17 04:53:22] 2024-05-17 11:52:55,841 | INFO     | adding to output.list: log.38776125._003782.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/ee/log.38776125._003782.job.log.tg
[2024-05-17 04:53:22] 2024-05-17 11:52:55,843 | INFO     | summary of transferred files:
[2024-05-17 04:53:22] 2024-05-17 11:52:55,843 | INFO     |  -- lfn=log.38776125._003782.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 04:53:22] 2024-05-17 11:52:55,843 | INFO     | stage-out finished correctly
[2024-05-17 04:53:22] 2024-05-17 11:52:58,132 | INFO     | 5792s have passed since pilot start
[2024-05-17 04:53:22] 2024-05-17 11:52:58,410 | WARNING  | process 53878 is no longer using CPU - aborting
[2024-05-17 04:53:22] 2024-05-17 11:52:58,411 | INFO     | will not send any job update
[2024-05-17 04:53:22] 2024-05-17 11:52:58,742 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 04:53:22] 2024-05-17 11:53:00,914 | INFO     | monitor loop #402: job 0:6205813932 is in state 'finished'
[2024-05-17 04:53:22] 2024-05-17 11:53:00,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 04:53:22] 2024-05-17 11:53:00,972 | INFO     | job 6205813932 has state=finished
[2024-05-17 04:53:22] 2024-05-17 11:53:00,972 | INFO     | preparing for final server update for job 6205813932 in state='finished'
[2024-05-17 04:53:22] 2024-05-17 11:53:00,973 | INFO     | this job has now completed (state=finished)
[2024-05-17 04:53:22] 2024-05-17 11:53:00,973 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 04:53:22] 2024-05-17 11:53:00,973 | INFO     | job 6205813932 has finished - writing final server update
[2024-05-17 04:53:22] 2024-05-17 11:53:00,974 | INFO     | total number of processed events: 400 (read)
[2024-05-17 04:53:22] 2024-05-17 11:53:00,980 | INFO     | executing command: lscpu
[2024-05-17 04:53:22] 2024-05-17 11:53:01,033 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 04:53:22] 2024-05-17 11:53:01,034 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 04:53:22] 2024-05-17 11:53:01,074 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 04:53:22] 2024-05-17 11:53:03,417 | INFO     | monitor loop #403: job 0:6205813932 is in state 'finished'
[2024-05-17 04:53:22] 2024-05-17 11:53:03,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 04:53:22] 2024-05-17 11:53:05,886 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 04:53:22] 2024-05-17 11:53:05,886 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6205813932/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 04:53:22] 2024-05-17 11:53:05,887 | INFO     | extracted standard info from prmon json
[2024-05-17 04:53:22] 2024-05-17 11:53:05,887 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 04:53:22] 2024-05-17 11:53:05,887 | WARNING  | GPU info not found in prmon json
[2024-05-17 04:53:22] 2024-05-17 11:53:05,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 04:53:22] 2024-05-17 11:53:05,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 04:53:22] 2024-05-17 11:53:05,889 | INFO     | fitting pss+swap vs Time
[2024-05-17 04:53:22] 2024-05-17 11:53:05,889 | INFO     | model: linear, x: [1715941322.0, 1715941383.0, 1715941444.0, 1715941505.0, 1715941566.0, 1715941627.0, 1715941688.0, 1715941749.0, 1715941810.0, 1715941871.0, 1715
[2024-05-17 04:53:22] 2024-05-17 11:53:05,889 | INFO     | sum of square deviations: 211307561.71590862
[2024-05-17 04:53:22] 2024-05-17 11:53:05,890 | INFO     | sum of deviations: 35428187598.99999
[2024-05-17 04:53:22] 2024-05-17 11:53:05,890 | INFO     | mean x: 1715943975.8068182
[2024-05-17 04:53:22] 2024-05-17 11:53:05,890 | INFO     | mean y: 2634581.0
[2024-05-17 04:53:22] 2024-05-17 11:53:05,890 | INFO     | -- intersect: -287695470449.38416
[2024-05-17 04:53:22] 2024-05-17 11:53:05,890 | INFO     | intersect: -287695470449.38416
[2024-05-17 04:53:22] 2024-05-17 11:53:05,890 | INFO     | chi2: 3.0019345751931588
[2024-05-17 04:53:22] 2024-05-17 11:53:05,890 | INFO     | -- intersect: -287695470449.38416
[2024-05-17 04:53:22] 2024-05-17 11:53:05,890 | INFO     | current memory leak: 167.66 B/s (using 88 data points, chi2=3.00)
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | ..............................
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | . Timing measurements:
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | . get job = 0 s
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | . initial setup = 2 s
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | . payload setup = 7 s
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | . stage-in = 0 s
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | . payload execution = 5758 s
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | . stage-out = 0 s
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | . log creation = 0 s
[2024-05-17 04:53:22] 2024-05-17 11:53:05,891 | INFO     | ..............................
[2024-05-17 04:53:22] 2024-05-17 11:53:05,960 | INFO     | 
[2024-05-17 04:53:22] 2024-05-17 11:53:05,960 | INFO     | job summary report
[2024-05-17 04:53:22] 2024-05-17 11:53:05,960 | INFO     | --------------------------------------------------
[2024-05-17 04:53:22] 2024-05-17 11:53:05,960 | INFO     | PanDA job id: 6205813932
[2024-05-17 04:53:22] 2024-05-17 11:53:05,960 | INFO     | task id: 38776125
[2024-05-17 04:53:22] 2024-05-17 11:53:05,960 | INFO     | errors: (none)
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | pilot state: finished 
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | transexitcode: 0
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | exeerrorcode: 0
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | exeerrordiag: 
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | exitcode: 0
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | exitmsg: OK
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | cpuconsumptiontime: 41279 s
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | nevents: 400
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | neventsw: 0
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | pid: 53878
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | pgrp: 53878
[2024-05-17 04:53:22] 2024-05-17 11:53:05,961 | INFO     | corecount: 12
[2024-05-17 04:53:22] 2024-05-17 11:53:05,962 | INFO     | event service: False
[2024-05-17 04:53:22] 2024-05-17 11:53:05,962 | INFO     | sizes: {0: 2392021, 1: 2392220, 6: 2392426, 11: 2392454, 5769: 2418927, 5771: 2427881, 5774: 2428065, 5781: 2428235}
[2024-05-17 04:53:22] 2024-05-17 11:53:05,962 | INFO     | --------------------------------------------------
[2024-05-17 04:53:22] 2024-05-17 11:53:05,962 | INFO     | 
[2024-05-17 04:53:22] 2024-05-17 11:53:05,962 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 04:53:22] 2024-05-17 11:53:05,989 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,989 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,989 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,989 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,990 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,990 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,991 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 04:53:22] 2024-05-17 11:53:05,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,992 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 04:53:22] 2024-05-17 11:53:05,992 | INFO     | job 6205813932 has completed (purged errors)
[2024-05-17 04:53:22] 2024-05-17 11:53:05,992 | INFO     | overall cleanup function is called
[2024-05-17 04:53:22] 2024-05-17 11:53:07,000 | INFO     | --- collectZombieJob: --- 10, [53878]
[2024-05-17 04:53:22] 2024-05-17 11:53:07,000 | INFO     | zombie collector waiting for pid 53878
[2024-05-17 04:53:22] 2024-05-17 11:53:07,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 04:53:22] 2024-05-17 11:53:08,005 | INFO     | collected zombie processes
[2024-05-17 04:53:22] 2024-05-17 11:53:08,005 | INFO     | will now attempt to kill all subprocesses of pid=53878
[2024-05-17 04:53:22] 2024-05-17 11:53:08,192 | INFO     | process IDs to be killed: [53878] (in reverse order)
[2024-05-17 04:53:22] 2024-05-17 11:53:08,305 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 04:53:22] 2024-05-17 11:53:08,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 04:53:22] 2024-05-17 11:53:08,319 | INFO     | did not find any defunct processes belonging to 53878
[2024-05-17 04:53:22] 2024-05-17 11:53:08,325 | INFO     | did not find any defunct processes belonging to 53878
[2024-05-17 04:53:22] 2024-05-17 11:53:08,326 | INFO     | ready for new job
[2024-05-17 04:53:22] 2024-05-17 11:53:08,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 04:53:22] 2024-05-17 11:53:08,332 | INFO     | *************************************
[2024-05-17 04:53:22] 2024-05-17 11:53:08,332 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 04:53:22] 2024-05-17 11:53:08,332 | INFO     | *************************************
[2024-05-17 04:53:22] 2024-05-17 11:53:08,332 | INFO     | 
[2024-05-17 04:53:22] 2024-05-17 11:53:08,335 | INFO     | architecture information:
[2024-05-17 04:53:22] 2024-05-17 11:53:08,335 | INFO     | executing command: cat /etc/os-release
[2024-05-17 04:53:22] 2024-05-17 11:53:08,358 | INFO     | cat /etc/os-release:
[2024-05-17 04:53:22] NAME="CentOS Linux"
[2024-05-17 04:53:22] VERSION="7 (Core)"
[2024-05-17 04:53:22] ID="centos"
[2024-05-17 04:53:22] ID_LIKE="rhel fedora"
[2024-05-17 04:53:22] VERSION_ID="7"
[2024-05-17 04:53:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 04:53:22] ANSI_COLOR="0;31"
[2024-05-17 04:53:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 04:53:22] HOME_URL="https://www.centos.org/"
[2024-05-17 04:53:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 04:53:22] 
[2024-05-17 04:53:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 04:53:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 04:53:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 04:53:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 04:53:22] 
[2024-05-17 04:53:22] 2024-05-17 11:53:08,359 | INFO     | *************************************
[2024-05-17 04:53:22] 2024-05-17 11:53:08,862 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 04:53:22] 2024-05-17 11:53:08,889 | INFO     | sufficient remaining disk space (2083528900608 B)
[2024-05-17 04:53:22] 2024-05-17 11:53:08,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 04:53:22] 2024-05-17 11:53:08,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 04:53:22] 2024-05-17 11:53:08,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 04:53:22] 2024-05-17 11:53:09,162 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 04:53:22] 2024-05-17 11:53:09,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 04:53:22] 2024-05-17 11:53:09,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 04:53:22] 2024-05-17 11:53:09,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 04:53:22] 2024-05-17 11:53:09,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 04:53:22] 2024-05-17 11:53:09,434 | INFO     | aborting loop
[2024-05-17 04:53:22] 2024-05-17 11:53:09,695 | INFO     | all data control threads have been joined
[2024-05-17 04:53:22] 2024-05-17 11:53:09,895 | INFO     | [job] retrieve thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:09,927 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:10,177 | INFO     | all payload control threads have been joined
[2024-05-17 04:53:22] 2024-05-17 11:53:10,202 | INFO     | all job control threads have been joined
[2024-05-17 04:53:22] 2024-05-17 11:53:10,303 | INFO     | [payload] failed_post thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:10,373 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:10,439 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:10,440 | INFO     | [job] job monitor thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:10,700 | INFO     | [data] control thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:10,821 | INFO     | [data] copytool_in thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:10,936 | INFO     | [data] copytool_out thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:10,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 04:53:22] 2024-05-17 11:53:11,073 | INFO     | [job] validate thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:11,182 | INFO     | [payload] control thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:11,207 | INFO     | [job] control thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:11,374 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:11,443 | INFO     | [payload] validate_post thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:11,976 | INFO     | [job] queue monitor thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:13,329 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 04:53:22] 2024-05-17 11:53:13,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140297596581696)>', '<ExcThread(monitor, started 140297044485888)>']
[2024-05-17 04:53:22] 2024-05-17 11:53:14,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 04:53:22] 2024-05-17 11:53:14,185 | INFO     | [monitor] control thread has ended
[2024-05-17 04:53:22] 2024-05-17 11:53:18,728 | INFO     | all workflow threads have been joined
[2024-05-17 04:53:22] 2024-05-17 11:53:18,729 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 04:53:22] 2024-05-17 11:53:18,729 | INFO     | traces error code: 0
[2024-05-17 04:53:22] 2024-05-17 11:53:18,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 04:53:22] 2024-05-17 11:53:18,805 [wrapper] ==== pilot stdout END ====
[2024-05-17 04:53:22] 2024-05-17 11:53:18,809 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 04:53:22] 2024-05-17 11:53:18,813 [wrapper] pilotpid: 47289
[2024-05-17 04:53:22] 2024-05-17 11:53:18,817 [wrapper] Pilot exit status: 0
[2024-05-17 04:53:22] 2024-05-17 11:53:18,829 [wrapper] pandaids: 6205813932
[2024-05-17 04:53:22] 2024-05-17 11:53:18,907 [wrapper] cleanup: SIGTERM to supervisor_pilot 232905 47290
[2024-05-17 04:53:22] 2024-05-17 11:53:18,911 [wrapper] Test setup, not cleaning
[2024-05-17 04:53:22] 2024-05-17 11:53:18,915 [wrapper] ==== wrapper stdout END ====
[2024-05-17 04:53:22] 2024-05-17 11:53:18,918 [wrapper] ==== wrapper stderr END ====
[2024-05-17 04:53:22] 2024-05-17 11:53:18,925 [wrapper] apfmon messages muted
[2024-05-17 04:53:22]  *** Error codes and diagnostics ***
[2024-05-17 04:53:22]     "exeErrorCode": 0,
[2024-05-17 04:53:22]     "exeErrorDiag": "",
[2024-05-17 04:53:22]     "pilotErrorCode": 0,
[2024-05-17 04:53:22]     "pilotErrorDiag": "",
[2024-05-17 04:53:22]  *** Listing of results directory ***
[2024-05-17 04:53:22] total 827520
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc    467845 May 12 23:49 pilot3.tar.gz
[2024-05-17 04:53:22] -rwx------ 1 boinc boinc     32251 May 12 23:56 runpilot2-wrapper.sh
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc      5633 May 13 00:02 queuedata.json
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc       100 May 17 03:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 04:53:22] -rwxr-xr-x 1 boinc boinc      7986 May 17 03:16 run_atlas
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc       105 May 17 03:16 job.xml
[2024-05-17 04:53:22] -rw-r--r-- 2 boinc boinc 599171396 May 17 03:16 EVNT.38776119._000170.pool.root.1
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc      6620 May 17 03:16 init_data.xml
[2024-05-17 04:53:22] drwxrwx--x 2 boinc boinc      4096 May 17 03:16 shared
[2024-05-17 04:53:22] -rw-r--r-- 2 boinc boinc    480006 May 17 03:16 input.tar.gz
[2024-05-17 04:53:22] -rw-r--r-- 2 boinc boinc     17537 May 17 03:16 start_atlas.sh
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc         0 May 17 03:16 boinc_lockfile
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc      2634 May 17 03:16 pandaJob.out
[2024-05-17 04:53:22] -rw------- 1 boinc boinc       424 May 17 03:16 setup.sh.local
[2024-05-17 04:53:22] -rw------- 1 boinc boinc   1019400 May 17 03:16 agis_schedconf.cvmfs.json
[2024-05-17 04:53:22] -rw------- 1 boinc boinc         0 May 17 03:16 agis_ddmendpoints.agis.ALL.json
[2024-05-17 04:53:22] -rw------- 1 boinc boinc   1324701 May 17 03:16 cric_ddmendpoints.json
[2024-05-17 04:53:22] drwx------ 4 boinc boinc      4096 May 17 03:16 pilot3
[2024-05-17 04:53:22] -rw------- 1 boinc boinc 242909106 May 17 04:52 HITS.38776125._003782.pool.root.1
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc       530 May 17 04:52 boinc_task_state.xml
[2024-05-17 04:53:22] -rw------- 1 boinc boinc      1066 May 17 04:52 memory_monitor_summary.json
[2024-05-17 04:53:22] -rw------- 1 boinc boinc        95 May 17 04:52 pilot_heartbeat.json
[2024-05-17 04:53:22] -rw------- 1 boinc boinc    371939 May 17 04:52 log.38776125._003782.job.log.tgz.1
[2024-05-17 04:53:22] -rw------- 1 boinc boinc      7786 May 17 04:53 heartbeat.json
[2024-05-17 04:53:22] -rw------- 1 boinc boinc      4210 May 17 04:53 pilotlog.txt
[2024-05-17 04:53:22] -rw------- 1 boinc boinc    514994 May 17 04:53 log.38776125._003782.job.log.1
[2024-05-17 04:53:22] -rw------- 1 boinc boinc       357 May 17 04:53 output.list
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc       620 May 17 04:53 runtime_log
[2024-05-17 04:53:22] -rw------- 1 boinc boinc    901120 May 17 04:53 result.tar.gz
[2024-05-17 04:53:22] -rw------- 1 boinc boinc       654 May 17 04:53 TcAODm1meQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDm6xWKDmEFjtbn.diag
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc     11286 May 17 04:53 runtime_log.err
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc        27 May 17 04:53 wrapper_checkpoint.txt
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc      8192 May 17 04:53 boinc_mmap_file
[2024-05-17 04:53:22] -rw-r--r-- 1 boinc boinc     21560 May 17 04:53 stderr.txt
[2024-05-17 04:53:22] HITS file was successfully produced:
[2024-05-17 04:53:22] -rw------- 1 boinc boinc 242909106 May 17 04:52 shared/HITS.pool.root.1
[2024-05-17 04:53:22]  *** Contents of shared directory: ***
[2024-05-17 04:53:22] total 823728
[2024-05-17 04:53:22] -rw-r--r-- 2 boinc boinc 599171396 May 17 03:16 ATLAS.root_0
[2024-05-17 04:53:22] -rw-r--r-- 2 boinc boinc    480006 May 17 03:16 input.tar.gz
[2024-05-17 04:53:22] -rw-r--r-- 2 boinc boinc     17537 May 17 03:16 start_atlas.sh
[2024-05-17 04:53:22] -rw------- 1 boinc boinc 242909106 May 17 04:52 HITS.pool.root.1
[2024-05-17 04:53:22] -rw------- 1 boinc boinc    901120 May 17 04:53 result.tar.gz
04:53:23 (43047): run_atlas exited; CPU time 41025.043401
04:53:23 (43047): called boinc_finish(0)

</stderr_txt>
]]>

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