Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:28:11 (287846): wrapper (7.7.26015): starting
11:28:11 (287846): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 11:28:11] Arguments: --nthreads 4
[2024-05-19 11:28:11] Threads: 4
[2024-05-19 11:28:11] Checking for CVMFS
[2024-05-19 11:28:11] No cvmfs_config command found, will try listing directly
[2024-05-19 11:28:11] CVMFS is ok
[2024-05-19 11:28:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 11:28:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 11:28:11] Further information can be found at the LHC@home message board.
[2024-05-19 11:28:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 11:28:11] Checking for apptainer binary...
[2024-05-19 11:28:11] which: no apptainer in ((null))
[2024-05-19 11:28:11] apptainer is not installed, using version from CVMFS
[2024-05-19 11:28:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 11:28:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2024-05-19 11:28:12] apptainer works
[2024-05-19 11:28:12] Set ATHENA_PROC_NUMBER=4
[2024-05-19 11:28:12] Set ATHENA_CORE_NUMBER=4
[2024-05-19 11:28:12] Starting ATLAS job with PandaID=6205818067
[2024-05-19 11:28:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 16:20:18]  *** The last 200 lines of the pilot log: ***
[2024-05-19 16:20:18] 2024-05-19 14:20:02,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 16:20:18] 2024-05-19 14:20:02,772 | INFO     | fitting pss+swap vs Time
[2024-05-19 16:20:18] 2024-05-19 14:20:02,772 | INFO     | model: linear, x: [1716110924.0, 1716110985.0, 1716111046.0, 1716111107.0, 1716111168.0, 1716111229.0, 1716111290.0, 1716111351.0, 1716111412.0, 1716111473.0, 1716
[2024-05-19 16:20:18] 2024-05-19 14:20:02,772 | INFO     | sum of square deviations: 7330250928.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,775 | INFO     | sum of deviations: 78172739520.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,775 | INFO     | mean x: 1716119647.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,775 | INFO     | mean y: 2310045.149825784
[2024-05-19 16:20:18] 2024-05-19 14:20:02,775 | INFO     | -- intersect: -18299079016.12316
[2024-05-19 16:20:18] 2024-05-19 14:20:02,775 | INFO     | intersect: -18299079016.12316
[2024-05-19 16:20:18] 2024-05-19 14:20:02,776 | INFO     | chi2: 4.177372967018817
[2024-05-19 16:20:18] 2024-05-19 14:20:02,776 | INFO     | model: linear, x: [1716110924.0, 1716110985.0, 1716111046.0, 1716111107.0, 1716111168.0, 1716111229.0, 1716111290.0, 1716111351.0, 1716111412.0, 1716111473.0, 1716
[2024-05-19 16:20:18] 2024-05-19 14:20:02,777 | INFO     | sum of square deviations: 6953769450.5
[2024-05-19 16:20:18] 2024-05-19 14:20:02,779 | INFO     | sum of deviations: 94165815899.99998
[2024-05-19 16:20:18] 2024-05-19 14:20:02,779 | INFO     | mean x: 1716119494.5
[2024-05-19 16:20:18] 2024-05-19 14:20:02,779 | INFO     | mean y: 2316421.9007092197
[2024-05-19 16:20:18] 2024-05-19 14:20:02,780 | INFO     | -- intersect: -23236848110.634727
[2024-05-19 16:20:18] 2024-05-19 14:20:02,780 | INFO     | intersect: -23236848110.634727
[2024-05-19 16:20:18] 2024-05-19 14:20:02,780 | INFO     | chi2: 3.4367276404441913
[2024-05-19 16:20:18] 2024-05-19 14:20:02,780 | INFO     | current chi2=3.4367276404441913 (change=17.729930566941633 %)
[2024-05-19 16:20:18] 2024-05-19 14:20:02,780 | INFO     | right removable region: 281
[2024-05-19 16:20:18] 2024-05-19 14:20:02,781 | INFO     | model: linear, x: [1716111229.0, 1716111290.0, 1716111351.0, 1716111412.0, 1716111473.0, 1716111534.0, 1716111595.0, 1716111656.0, 1716111717.0, 1716111778.0, 1716
[2024-05-19 16:20:18] 2024-05-19 14:20:02,781 | INFO     | sum of square deviations: 6953769450.5
[2024-05-19 16:20:18] 2024-05-19 14:20:02,783 | INFO     | sum of deviations: 15843748868.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,784 | INFO     | mean x: 1716119799.5
[2024-05-19 16:20:18] 2024-05-19 14:20:02,784 | INFO     | mean y: 2335225.9078014186
[2024-05-19 16:20:18] 2024-05-19 14:20:02,784 | INFO     | -- intersect: -3907741362.6574802
[2024-05-19 16:20:18] 2024-05-19 14:20:02,784 | INFO     | intersect: -3907741362.6574802
[2024-05-19 16:20:18] 2024-05-19 14:20:02,785 | INFO     | chi2: 1.9769095304896753
[2024-05-19 16:20:18] 2024-05-19 14:20:02,785 | INFO     | current chi2=1.9769095304896753 (change=52.67577144540921 %)
[2024-05-19 16:20:18] 2024-05-19 14:20:02,785 | INFO     | model: linear, x: [1716111534.0, 1716111595.0, 1716111656.0, 1716111717.0, 1716111778.0, 1716111839.0, 1716111900.0, 1716111961.0, 1716112022.0, 1716112083.0, 1716
[2024-05-19 16:20:18] 2024-05-19 14:20:02,785 | INFO     | sum of square deviations: 6590404498.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,787 | INFO     | sum of deviations: -30281710585.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,788 | INFO     | mean x: 1716119952.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,788 | INFO     | mean y: 2354584.3610108304
[2024-05-19 16:20:18] 2024-05-19 14:20:02,788 | INFO     | -- intersect: 7887613786.793671
[2024-05-19 16:20:18] 2024-05-19 14:20:02,788 | INFO     | intersect: 7887613786.793671
[2024-05-19 16:20:18] 2024-05-19 14:20:02,788 | INFO     | chi2: 0.8854383440624388
[2024-05-19 16:20:18] 2024-05-19 14:20:02,789 | INFO     | current chi2=0.8854383440624388 (change=55.210983082108065 %)
[2024-05-19 16:20:18] 2024-05-19 14:20:02,789 | INFO     | model: linear, x: [1716111839.0, 1716111900.0, 1716111961.0, 1716112022.0, 1716112083.0, 1716112144.0, 1716112205.0, 1716112266.0, 1716112327.0, 1716112388.0, 1716
[2024-05-19 16:20:18] 2024-05-19 14:20:02,789 | INFO     | sum of square deviations: 6239923508.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,791 | INFO     | sum of deviations: -32232351688.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,791 | INFO     | mean x: 1716120104.5
[2024-05-19 16:20:18] 2024-05-19 14:20:02,791 | INFO     | mean y: 2355396.4779411764
[2024-05-19 16:20:18] 2024-05-19 14:20:02,792 | INFO     | -- intersect: 8866981168.921194
[2024-05-19 16:20:18] 2024-05-19 14:20:02,792 | INFO     | intersect: 8866981168.921194
[2024-05-19 16:20:18] 2024-05-19 14:20:02,792 | INFO     | chi2: 0.8440257249833719
[2024-05-19 16:20:18] 2024-05-19 14:20:02,792 | INFO     | current chi2=0.8440257249833719 (change=4.677075412056764 %)
[2024-05-19 16:20:18] 2024-05-19 14:20:02,792 | INFO     | left removable region: 30
[2024-05-19 16:20:18] 2024-05-19 14:20:02,793 | INFO     | model: linear, x: [1716112754.0, 1716112815.0, 1716112876.0, 1716112937.0, 1716112998.0, 1716113059.0, 1716113120.0, 1716113181.0, 1716113242.0, 1716113303.0, 1716
[2024-05-19 16:20:18] 2024-05-19 14:20:02,793 | INFO     | sum of square deviations: 4903347750.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,795 | INFO     | sum of deviations: 233070203.00001818
[2024-05-19 16:20:18] 2024-05-19 14:20:02,795 | INFO     | mean x: 1716120379.0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,795 | INFO     | mean y: 2355466.282868526
[2024-05-19 16:20:18] 2024-05-19 14:20:02,795 | INFO     | -- intersect: -79216664.73843181
[2024-05-19 16:20:18] 2024-05-19 14:20:02,796 | INFO     | intersect: -79216664.73843181
[2024-05-19 16:20:18] 2024-05-19 14:20:02,796 | INFO     | chi2: 0.03162764527346316
[2024-05-19 16:20:18] 2024-05-19 14:20:02,796 | INFO     | -- intersect: -79216664.73843181
[2024-05-19 16:20:18] 2024-05-19 14:20:02,796 | INFO     | current memory leak: 0.05 B/s (using 251 data points, chi2=0.03)
[2024-05-19 16:20:18] 2024-05-19 14:20:02,797 | INFO     | ..............................
[2024-05-19 16:20:18] 2024-05-19 14:20:02,797 | INFO     | . Timing measurements:
[2024-05-19 16:20:18] 2024-05-19 14:20:02,797 | INFO     | . get job = 0 s
[2024-05-19 16:20:18] 2024-05-19 14:20:02,798 | INFO     | . initial setup = 1 s
[2024-05-19 16:20:18] 2024-05-19 14:20:02,798 | INFO     | . payload setup = 4 s
[2024-05-19 16:20:18] 2024-05-19 14:20:02,798 | INFO     | . stage-in = 0 s
[2024-05-19 16:20:18] 2024-05-19 14:20:02,798 | INFO     | . payload execution = 17470 s
[2024-05-19 16:20:18] 2024-05-19 14:20:02,798 | INFO     | . stage-out = 0 s
[2024-05-19 16:20:18] 2024-05-19 14:20:02,798 | INFO     | . log creation = 0 s
[2024-05-19 16:20:18] 2024-05-19 14:20:02,798 | INFO     | ..............................
[2024-05-19 16:20:18] 2024-05-19 14:20:02,956 | INFO     | 
[2024-05-19 16:20:18] 2024-05-19 14:20:02,957 | INFO     | job summary report
[2024-05-19 16:20:18] 2024-05-19 14:20:02,957 | INFO     | --------------------------------------------------
[2024-05-19 16:20:18] 2024-05-19 14:20:02,957 | INFO     | PanDA job id: 6205818067
[2024-05-19 16:20:18] 2024-05-19 14:20:02,957 | INFO     | task id: 38776146
[2024-05-19 16:20:18] 2024-05-19 14:20:02,957 | INFO     | errors: (none)
[2024-05-19 16:20:18] 2024-05-19 14:20:02,957 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 16:20:18] 2024-05-19 14:20:02,957 | INFO     | pilot state: finished 
[2024-05-19 16:20:18] 2024-05-19 14:20:02,957 | INFO     | transexitcode: 0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | exeerrorcode: 0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | exeerrordiag: 
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | exitcode: 0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | exitmsg: OK
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | cpuconsumptiontime: 66897 s
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | nevents: 400
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | neventsw: 0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | pid: 298839
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | pgrp: 298839
[2024-05-19 16:20:18] 2024-05-19 14:20:02,958 | INFO     | corecount: 4
[2024-05-19 16:20:18] 2024-05-19 14:20:02,959 | INFO     | event service: False
[2024-05-19 16:20:18] 2024-05-19 14:20:02,959 | INFO     | sizes: {0: 2392181, 4: 2392387, 11: 2392415, 17478: 2424549, 17479: 2433531, 17483: 2433587, 17487: 2433885}
[2024-05-19 16:20:18] 2024-05-19 14:20:02,959 | INFO     | --------------------------------------------------
[2024-05-19 16:20:18] 2024-05-19 14:20:02,959 | INFO     | 
[2024-05-19 16:20:18] 2024-05-19 14:20:02,959 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2024-05-19 16:20:18] 2024-05-19 14:20:02,981 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,981 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,981 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,982 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,983 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 16:20:18] 2024-05-19 14:20:02,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,983 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 16:20:18] 2024-05-19 14:20:02,983 | INFO     | job 6205818067 has completed (purged errors)
[2024-05-19 16:20:18] 2024-05-19 14:20:02,984 | INFO     | overall cleanup function is called
[2024-05-19 16:20:18] 2024-05-19 14:20:03,991 | INFO     | --- collectZombieJob: --- 10, [298839]
[2024-05-19 16:20:18] 2024-05-19 14:20:03,991 | INFO     | zombie collector waiting for pid 298839
[2024-05-19 16:20:18] 2024-05-19 14:20:03,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 16:20:18] 2024-05-19 14:20:04,997 | INFO     | collected zombie processes
[2024-05-19 16:20:18] 2024-05-19 14:20:04,997 | INFO     | will now attempt to kill all subprocesses of pid=298839
[2024-05-19 16:20:18] 2024-05-19 14:20:05,119 | INFO     | process IDs to be killed: [298839] (in reverse order)
[2024-05-19 16:20:18] 2024-05-19 14:20:05,200 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 16:20:18] 2024-05-19 14:20:05,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 16:20:18] 2024-05-19 14:20:05,207 | INFO     | did not find any defunct processes belonging to 298839
[2024-05-19 16:20:18] 2024-05-19 14:20:05,212 | INFO     | did not find any defunct processes belonging to 298839
[2024-05-19 16:20:18] 2024-05-19 14:20:05,212 | INFO     | ready for new job
[2024-05-19 16:20:18] 2024-05-19 14:20:05,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 16:20:18] 2024-05-19 14:20:05,215 | INFO     | *************************************
[2024-05-19 16:20:18] 2024-05-19 14:20:05,215 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 16:20:18] 2024-05-19 14:20:05,215 | INFO     | *************************************
[2024-05-19 16:20:18] 2024-05-19 14:20:05,215 | INFO     | 
[2024-05-19 16:20:18] 2024-05-19 14:20:05,217 | INFO     | architecture information:
[2024-05-19 16:20:18] 2024-05-19 14:20:05,217 | INFO     | executing command: cat /etc/os-release
[2024-05-19 16:20:18] 2024-05-19 14:20:05,228 | INFO     | cat /etc/os-release:
[2024-05-19 16:20:18] NAME="CentOS Linux"
[2024-05-19 16:20:18] VERSION="7 (Core)"
[2024-05-19 16:20:18] ID="centos"
[2024-05-19 16:20:18] ID_LIKE="rhel fedora"
[2024-05-19 16:20:18] VERSION_ID="7"
[2024-05-19 16:20:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 16:20:18] ANSI_COLOR="0;31"
[2024-05-19 16:20:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 16:20:18] HOME_URL="https://www.centos.org/"
[2024-05-19 16:20:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 16:20:18] 
[2024-05-19 16:20:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 16:20:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 16:20:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 16:20:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 16:20:18] 
[2024-05-19 16:20:18] 2024-05-19 14:20:05,228 | INFO     | *************************************
[2024-05-19 16:20:18] 2024-05-19 14:20:05,731 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2024-05-19 16:20:18] 2024-05-19 14:20:05,747 | INFO     | sufficient remaining disk space (1615536848896 B)
[2024-05-19 16:20:18] 2024-05-19 14:20:05,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 16:20:18] 2024-05-19 14:20:05,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 16:20:18] 2024-05-19 14:20:05,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 16:20:18] 2024-05-19 14:20:05,875 | INFO     | all data control threads have been joined
[2024-05-19 16:20:18] 2024-05-19 14:20:05,899 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 16:20:18] 2024-05-19 14:20:05,899 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 16:20:18] 2024-05-19 14:20:05,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 16:20:18] 2024-05-19 14:20:05,900 | INFO     | will abort loop
[2024-05-19 16:20:18] 2024-05-19 14:20:06,277 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 16:20:18] 2024-05-19 14:20:06,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 16:20:18] 2024-05-19 14:20:06,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 16:20:18] 2024-05-19 14:20:06,306 | INFO     | all payload control threads have been joined
[2024-05-19 16:20:18] 2024-05-19 14:20:06,646 | INFO     | all job control threads have been joined
[2024-05-19 16:20:18] 2024-05-19 14:20:06,754 | INFO     | [job] retrieve thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:06,881 | INFO     | [data] control thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:06,905 | INFO     | [job] job monitor thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,009 | INFO     | [payload] failed_post thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,088 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,137 | INFO     | [job] validate thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,137 | INFO     | [data] copytool_in thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,304 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,311 | INFO     | [payload] control thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,396 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,652 | INFO     | [job] control thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,753 | INFO     | [data] copytool_out thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:07,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 16:20:18] 2024-05-19 14:20:08,000 | INFO     | [payload] validate_post thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:08,056 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:08,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 16:20:18] 2024-05-19 14:20:08,893 | INFO     | [job] queue monitor thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:12,772 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 16:20:18] 2024-05-19 14:20:12,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47724233872448)>', '<ExcThread(monitor, started 47724747572992)>']
[2024-05-19 16:20:18] 2024-05-19 14:20:13,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 16:20:18] 2024-05-19 14:20:13,306 | INFO     | [monitor] control thread has ended
[2024-05-19 16:20:18] 2024-05-19 14:20:17,947 | INFO     | all workflow threads have been joined
[2024-05-19 16:20:18] 2024-05-19 14:20:17,947 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 16:20:18] 2024-05-19 14:20:17,947 | INFO     | traces error code: 0
[2024-05-19 16:20:18] 2024-05-19 14:20:17,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 16:20:18] 2024-05-19 14:20:18,043 [wrapper] ==== pilot stdout END ====
[2024-05-19 16:20:18] 2024-05-19 14:20:18,046 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 16:20:18] 2024-05-19 14:20:18,049 [wrapper] pilotpid: 292045
[2024-05-19 16:20:18] 2024-05-19 14:20:18,051 [wrapper] Pilot exit status: 0
[2024-05-19 16:20:18] 2024-05-19 14:20:18,060 [wrapper] pandaids: 6205818067
[2024-05-19 16:20:18] 2024-05-19 14:20:18,116 [wrapper] cleanup: SIGTERM to supervisor_pilot  653814 292046
[2024-05-19 16:20:18] 2024-05-19 14:20:18,119 [wrapper] Test setup, not cleaning
[2024-05-19 16:20:18] 2024-05-19 14:20:18,121 [wrapper] ==== wrapper stdout END ====
[2024-05-19 16:20:18] 2024-05-19 14:20:18,124 [wrapper] ==== wrapper stderr END ====
[2024-05-19 16:20:18] 2024-05-19 14:20:18,128 [wrapper] apfmon messages muted
[2024-05-19 16:20:18]  *** Error codes and diagnostics ***
[2024-05-19 16:20:18]     "exeErrorCode": 0,
[2024-05-19 16:20:18]     "exeErrorDiag": "",
[2024-05-19 16:20:18]     "pilotErrorCode": 0,
[2024-05-19 16:20:18]     "pilotErrorDiag": "",
[2024-05-19 16:20:18]  *** Listing of results directory ***
[2024-05-19 16:20:18] total 876664
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc    467845 May 13 08:49 pilot3.tar.gz
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc      5633 May 13 09:07 queuedata.json
[2024-05-19 16:20:18] -rwx------ 1 boinc boinc     32251 May 13 09:09 runpilot2-wrapper.sh
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc       100 May 19 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 16:20:18] -rwxr-xr-x 1 boinc boinc      7986 May 19 11:28 run_atlas
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc       105 May 19 11:28 job.xml
[2024-05-19 16:20:18] -rw-r--r-- 2 boinc boinc 615461860 May 19 11:28 EVNT.38776140._000019.pool.root.1
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc      6456 May 19 11:28 init_data.xml
[2024-05-19 16:20:18] -rw-r--r-- 2 boinc boinc     17537 May 19 11:28 start_atlas.sh
[2024-05-19 16:20:18] drwxrwx--x 2 boinc boinc      4096 May 19 11:28 shared
[2024-05-19 16:20:18] -rw-r--r-- 2 boinc boinc    479990 May 19 11:28 input.tar.gz
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc         0 May 19 11:28 boinc_lockfile
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc      2612 May 19 11:28 pandaJob.out
[2024-05-19 16:20:18] -rw------- 1 boinc boinc       424 May 19 11:28 setup.sh.local
[2024-05-19 16:20:18] -rw------- 1 boinc boinc   1014061 May 19 11:28 agis_schedconf.cvmfs.json
[2024-05-19 16:20:18] -rw------- 1 boinc boinc   1324701 May 19 11:28 cric_ddmendpoints.json
[2024-05-19 16:20:18] drwx------ 4 boinc boinc      4096 May 19 11:28 pilot3
[2024-05-19 16:20:18] -rw------- 1 boinc boinc        95 May 19 16:19 pilot_heartbeat.json
[2024-05-19 16:20:18] -rw------- 1 boinc boinc 274078783 May 19 16:19 HITS.38776146._000465.pool.root.1
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc       531 May 19 16:19 boinc_task_state.xml
[2024-05-19 16:20:18] -rw------- 1 boinc boinc      1066 May 19 16:19 memory_monitor_summary.json
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc      8192 May 19 16:19 boinc_mmap_file
[2024-05-19 16:20:18] -rw------- 1 boinc boinc         0 May 19 16:19 agis_ddmendpoints.agis.ALL.json
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc        28 May 19 16:19 wrapper_checkpoint.txt
[2024-05-19 16:20:18] -rw------- 1 boinc boinc    381912 May 19 16:19 log.38776146._000465.job.log.tgz.1
[2024-05-19 16:20:18] -rw------- 1 boinc boinc      7768 May 19 16:20 heartbeat.json
[2024-05-19 16:20:18] -rw------- 1 boinc boinc      4408 May 19 16:20 pilotlog.txt
[2024-05-19 16:20:18] -rw------- 1 boinc boinc   1933989 May 19 16:20 log.38776146._000465.job.log.1
[2024-05-19 16:20:18] -rw------- 1 boinc boinc       357 May 19 16:20 output.list
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc       620 May 19 16:20 runtime_log
[2024-05-19 16:20:18] -rw------- 1 boinc boinc   2334720 May 19 16:20 result.tar.gz
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc     11410 May 19 16:20 runtime_log.err
[2024-05-19 16:20:18] -rw------- 1 boinc boinc       659 May 19 16:20 M7eLDmrzeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmCgJKDmAm61nn.diag
[2024-05-19 16:20:18] -rw-r--r-- 1 boinc boinc     21300 May 19 16:20 stderr.txt
[2024-05-19 16:20:18] HITS file was successfully produced:
[2024-05-19 16:20:18] -rw------- 1 boinc boinc 274078783 May 19 16:19 shared/HITS.pool.root.1
[2024-05-19 16:20:18]  *** Contents of shared directory: ***
[2024-05-19 16:20:18] total 871476
[2024-05-19 16:20:18] -rw-r--r-- 2 boinc boinc 615461860 May 19 11:28 ATLAS.root_0
[2024-05-19 16:20:18] -rw-r--r-- 2 boinc boinc     17537 May 19 11:28 start_atlas.sh
[2024-05-19 16:20:18] -rw-r--r-- 2 boinc boinc    479990 May 19 11:28 input.tar.gz
[2024-05-19 16:20:18] -rw------- 1 boinc boinc 274078783 May 19 16:19 HITS.pool.root.1
[2024-05-19 16:20:18] -rw------- 1 boinc boinc   2334720 May 19 16:20 result.tar.gz
16:20:20 (287846): run_atlas exited; CPU time 66579.417719
16:20:20 (287846): called boinc_finish(0)

</stderr_txt>
]]>

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