Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:48:46 (379591): wrapper (7.7.26015): starting
21:48:46 (379591): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 21:48:46] Arguments: --nthreads 4
[2024-05-19 21:48:46] Threads: 4
[2024-05-19 21:48:46] Checking for CVMFS
[2024-05-19 21:48:46] No cvmfs_config command found, will try listing directly
[2024-05-19 21:48:46] CVMFS is ok
[2024-05-19 21:48:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 21:48:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 21:48:46] Further information can be found at the LHC@home message board.
[2024-05-19 21:48:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 21:48:46] Checking for apptainer binary...
[2024-05-19 21:48:46] which: no apptainer in ((null))
[2024-05-19 21:48:46] apptainer is not installed, using version from CVMFS
[2024-05-19 21:48:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 21:48:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2024-05-19 21:48:48] apptainer works
[2024-05-19 21:48:48] Set ATHENA_PROC_NUMBER=4
[2024-05-19 21:48:48] Set ATHENA_CORE_NUMBER=4
[2024-05-19 21:48:48] Starting ATLAS job with PandaID=6205818065
[2024-05-19 21:48:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 01:07:38]  *** The last 200 lines of the pilot log: ***
[2024-05-20 01:07:38] 2024-05-19 23:07:23,674 | INFO     | -- intersect: -25840298790.337467
[2024-05-20 01:07:38] 2024-05-19 23:07:23,674 | INFO     | intersect: -25840298790.337467
[2024-05-20 01:07:38] 2024-05-19 23:07:23,674 | INFO     | chi2: 1.2241049697371842
[2024-05-20 01:07:38] 2024-05-19 23:07:23,674 | INFO     | current chi2=1.2241049697371842 (change=66.96201379991479 %)
[2024-05-20 01:07:38] 2024-05-19 23:07:23,674 | INFO     | model: linear, x: [1716148775.0, 1716148836.0, 1716148897.0, 1716148958.0, 1716149019.0, 1716149080.0, 1716149141.0, 1716149202.0, 1716149263.0, 1716149324.0, 1716
[2024-05-20 01:07:38] 2024-05-19 23:07:23,674 | INFO     | sum of square deviations: 1963274020.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,675 | INFO     | sum of deviations: -69686216.9999997
[2024-05-20 01:07:38] 2024-05-19 23:07:23,675 | INFO     | mean x: 1716154387.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,675 | INFO     | mean y: 2355690.7297297297
[2024-05-20 01:07:38] 2024-05-19 23:07:23,675 | INFO     | -- intersect: 63270420.81818853
[2024-05-20 01:07:38] 2024-05-19 23:07:23,675 | INFO     | intersect: 63270420.81818853
[2024-05-20 01:07:38] 2024-05-19 23:07:23,675 | INFO     | chi2: 0.06057596934913114
[2024-05-20 01:07:38] 2024-05-19 23:07:23,675 | INFO     | current chi2=0.06057596934913114 (change=95.05140728559113 %)
[2024-05-20 01:07:38] 2024-05-19 23:07:23,675 | INFO     | model: linear, x: [1716149080.0, 1716149141.0, 1716149202.0, 1716149263.0, 1716149324.0, 1716149385.0, 1716149446.0, 1716149507.0, 1716149568.0, 1716149629.0, 1716
[2024-05-20 01:07:38] 2024-05-19 23:07:23,675 | INFO     | sum of square deviations: 1808350185.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,676 | INFO     | sum of deviations: -837429715.9999976
[2024-05-20 01:07:38] 2024-05-19 23:07:23,676 | INFO     | mean x: 1716154539.5
[2024-05-20 01:07:38] 2024-05-19 23:07:23,676 | INFO     | mean y: 2356371.5222222223
[2024-05-20 01:07:38] 2024-05-19 23:07:23,676 | INFO     | -- intersect: 797091163.7912272
[2024-05-20 01:07:38] 2024-05-19 23:07:23,676 | INFO     | intersect: 797091163.7912272
[2024-05-20 01:07:38] 2024-05-19 23:07:23,676 | INFO     | chi2: 0.021423698810625186
[2024-05-20 01:07:38] 2024-05-19 23:07:23,676 | INFO     | current chi2=0.021423698810625186 (change=64.63333721141274 %)
[2024-05-20 01:07:38] 2024-05-19 23:07:23,677 | INFO     | model: linear, x: [1716149385.0, 1716149446.0, 1716149507.0, 1716149568.0, 1716149629.0, 1716149690.0, 1716149751.0, 1716149812.0, 1716149873.0, 1716149934.0, 1716
[2024-05-20 01:07:38] 2024-05-19 23:07:23,677 | INFO     | sum of square deviations: 1661798600.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,677 | INFO     | sum of deviations: 1696122080.0000002
[2024-05-20 01:07:38] 2024-05-19 23:07:23,677 | INFO     | mean x: 1716154692.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,677 | INFO     | mean y: 2353733.0342857144
[2024-05-20 01:07:38] 2024-05-19 23:07:23,677 | INFO     | -- intersect: -1749247132.315342
[2024-05-20 01:07:38] 2024-05-19 23:07:23,677 | INFO     | intersect: -1749247132.315342
[2024-05-20 01:07:38] 2024-05-19 23:07:23,678 | INFO     | chi2: 0.013394778568481713
[2024-05-20 01:07:38] 2024-05-19 23:07:23,678 | INFO     | current chi2=0.013394778568481713 (change=37.476816273021406 %)
[2024-05-20 01:07:38] 2024-05-19 23:07:23,678 | INFO     | model: linear, x: [1716149690.0, 1716149751.0, 1716149812.0, 1716149873.0, 1716149934.0, 1716149995.0, 1716150056.0, 1716150117.0, 1716150178.0, 1716150239.0, 1716
[2024-05-20 01:07:38] 2024-05-19 23:07:23,678 | INFO     | sum of square deviations: 1523386702.5
[2024-05-20 01:07:38] 2024-05-19 23:07:23,678 | INFO     | sum of deviations: 4577783979.000001
[2024-05-20 01:07:38] 2024-05-19 23:07:23,678 | INFO     | mean x: 1716154844.5
[2024-05-20 01:07:38] 2024-05-19 23:07:23,678 | INFO     | mean y: 2350554.105882353
[2024-05-20 01:07:38] 2024-05-19 23:07:23,679 | INFO     | -- intersect: -5154702569.53154
[2024-05-20 01:07:38] 2024-05-19 23:07:23,679 | INFO     | intersect: -5154702569.53154
[2024-05-20 01:07:38] 2024-05-19 23:07:23,679 | INFO     | chi2: 0.00026954589757256005
[2024-05-20 01:07:38] 2024-05-19 23:07:23,679 | INFO     | current chi2=0.00026954589757256005 (change=97.98767933195394 %)
[2024-05-20 01:07:38] 2024-05-19 23:07:23,679 | INFO     | model: linear, x: [1716149995.0, 1716150056.0, 1716150117.0, 1716150178.0, 1716150239.0, 1716150300.0, 1716150361.0, 1716150422.0, 1716150483.0, 1716150544.0, 1716
[2024-05-20 01:07:38] 2024-05-19 23:07:23,679 | INFO     | sum of square deviations: 1392881930.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | sum of deviations: 4019196853.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | mean x: 1716154997.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | mean y: 2351204.812121212
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | -- intersect: -4949658448.441565
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | intersect: -4949658448.441565
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | chi2: 0.00020386118727027462
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | current chi2=0.00020386118727027462 (change=24.368655169238302 %)
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | left removable region: 60
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | model: linear, x: [1716151825.0, 1716151886.0, 1716151947.0, 1716152008.0, 1716152069.0, 1716152130.0, 1716152191.0, 1716152252.0, 1716152313.0, 1716152374.0, 1716
[2024-05-20 01:07:38] 2024-05-19 23:07:23,680 | INFO     | sum of square deviations: 665612480.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | sum of deviations: 1603857932.9999998
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | mean x: 1716155729.0
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | mean y: 2353903.1550387596
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | -- intersect: -4132890045.72652
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | intersect: -4132890045.72652
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | chi2: 9.696298326115536e-05
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | -- intersect: -4132890045.72652
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | current memory leak: 2.41 B/s (using 129 data points, chi2=0.00)
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | ..............................
[2024-05-20 01:07:38] 2024-05-19 23:07:23,681 | INFO     | . Timing measurements:
[2024-05-20 01:07:38] 2024-05-19 23:07:23,682 | INFO     | . get job = 0 s
[2024-05-20 01:07:38] 2024-05-19 23:07:23,682 | INFO     | . initial setup = 1 s
[2024-05-20 01:07:38] 2024-05-19 23:07:23,682 | INFO     | . payload setup = 6 s
[2024-05-20 01:07:38] 2024-05-19 23:07:23,682 | INFO     | . stage-in = 0 s
[2024-05-20 01:07:38] 2024-05-19 23:07:23,682 | INFO     | . payload execution = 11871 s
[2024-05-20 01:07:38] 2024-05-19 23:07:23,682 | INFO     | . stage-out = 0 s
[2024-05-20 01:07:38] 2024-05-19 23:07:23,682 | INFO     | . log creation = 0 s
[2024-05-20 01:07:38] 2024-05-19 23:07:23,682 | INFO     | ..............................
[2024-05-20 01:07:38] 2024-05-19 23:07:24,076 | INFO     | 
[2024-05-20 01:07:38] 2024-05-19 23:07:24,076 | INFO     | job summary report
[2024-05-20 01:07:38] 2024-05-19 23:07:24,076 | INFO     | --------------------------------------------------
[2024-05-20 01:07:38] 2024-05-19 23:07:24,076 | INFO     | PanDA job id: 6205818065
[2024-05-20 01:07:38] 2024-05-19 23:07:24,076 | INFO     | task id: 38776146
[2024-05-20 01:07:38] 2024-05-19 23:07:24,076 | INFO     | errors: (none)
[2024-05-20 01:07:38] 2024-05-19 23:07:24,076 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | pilot state: finished 
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | transexitcode: 0
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | exeerrorcode: 0
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | exeerrordiag: 
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | exitcode: 0
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | exitmsg: OK
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | cpuconsumptiontime: 44742 s
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | nevents: 400
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | neventsw: 0
[2024-05-20 01:07:38] 2024-05-19 23:07:24,077 | INFO     | pid: 391517
[2024-05-20 01:07:38] 2024-05-19 23:07:24,078 | INFO     | pgrp: 391517
[2024-05-20 01:07:38] 2024-05-19 23:07:24,078 | INFO     | corecount: 4
[2024-05-20 01:07:38] 2024-05-19 23:07:24,078 | INFO     | event service: False
[2024-05-20 01:07:38] 2024-05-19 23:07:24,078 | INFO     | sizes: {0: 2392181, 3: 2392387, 10: 2392415, 11882: 2422047, 11883: 2431029, 11885: 2431085, 11892: 2431383}
[2024-05-20 01:07:38] 2024-05-19 23:07:24,078 | INFO     | --------------------------------------------------
[2024-05-20 01:07:38] 2024-05-19 23:07:24,078 | INFO     | 
[2024-05-20 01:07:38] 2024-05-19 23:07:24,078 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2024-05-20 01:07:38] 2024-05-19 23:07:24,101 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,102 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,102 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,102 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,103 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 01:07:38] 2024-05-19 23:07:24,104 | INFO     | job 6205818065 has completed (purged errors)
[2024-05-20 01:07:38] 2024-05-19 23:07:24,104 | INFO     | overall cleanup function is called
[2024-05-20 01:07:38] 2024-05-19 23:07:25,111 | INFO     | --- collectZombieJob: --- 10, [391517]
[2024-05-20 01:07:38] 2024-05-19 23:07:25,111 | INFO     | zombie collector waiting for pid 391517
[2024-05-20 01:07:38] 2024-05-19 23:07:25,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 01:07:38] 2024-05-19 23:07:26,116 | INFO     | collected zombie processes
[2024-05-20 01:07:38] 2024-05-19 23:07:26,116 | INFO     | will now attempt to kill all subprocesses of pid=391517
[2024-05-20 01:07:38] 2024-05-19 23:07:26,270 | INFO     | process IDs to be killed: [391517] (in reverse order)
[2024-05-20 01:07:38] 2024-05-19 23:07:26,361 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 01:07:38] 2024-05-19 23:07:26,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 01:07:38] 2024-05-19 23:07:26,369 | INFO     | did not find any defunct processes belonging to 391517
[2024-05-20 01:07:38] 2024-05-19 23:07:26,375 | INFO     | did not find any defunct processes belonging to 391517
[2024-05-20 01:07:38] 2024-05-19 23:07:26,375 | INFO     | ready for new job
[2024-05-20 01:07:38] 2024-05-19 23:07:26,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 01:07:38] 2024-05-19 23:07:26,377 | INFO     | *************************************
[2024-05-20 01:07:38] 2024-05-19 23:07:26,377 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 01:07:38] 2024-05-19 23:07:26,377 | INFO     | *************************************
[2024-05-20 01:07:38] 2024-05-19 23:07:26,377 | INFO     | 
[2024-05-20 01:07:38] 2024-05-19 23:07:26,380 | INFO     | architecture information:
[2024-05-20 01:07:38] 2024-05-19 23:07:26,380 | INFO     | executing command: cat /etc/os-release
[2024-05-20 01:07:38] 2024-05-19 23:07:26,394 | INFO     | cat /etc/os-release:
[2024-05-20 01:07:38] NAME="CentOS Linux"
[2024-05-20 01:07:38] VERSION="7 (Core)"
[2024-05-20 01:07:38] ID="centos"
[2024-05-20 01:07:38] ID_LIKE="rhel fedora"
[2024-05-20 01:07:38] VERSION_ID="7"
[2024-05-20 01:07:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 01:07:38] ANSI_COLOR="0;31"
[2024-05-20 01:07:38] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 01:07:38] HOME_URL="https://www.centos.org/"
[2024-05-20 01:07:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 01:07:38] 
[2024-05-20 01:07:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 01:07:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 01:07:38] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 01:07:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 01:07:38] 
[2024-05-20 01:07:38] 2024-05-19 23:07:26,395 | INFO     | *************************************
[2024-05-20 01:07:38] 2024-05-19 23:07:26,897 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2024-05-20 01:07:38] 2024-05-19 23:07:26,915 | INFO     | sufficient remaining disk space (586945658880 B)
[2024-05-20 01:07:38] 2024-05-19 23:07:26,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 01:07:38] 2024-05-19 23:07:26,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 01:07:38] 2024-05-19 23:07:26,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 01:07:38] 2024-05-19 23:07:26,916 | INFO     | aborting loop
[2024-05-20 01:07:38] 2024-05-19 23:07:26,965 | INFO     | all data control threads have been joined
[2024-05-20 01:07:38] 2024-05-19 23:07:27,125 | INFO     | all payload control threads have been joined
[2024-05-20 01:07:38] 2024-05-19 23:07:27,409 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 01:07:38] 2024-05-19 23:07:27,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 01:07:38] 2024-05-19 23:07:27,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 01:07:38] 2024-05-19 23:07:27,921 | INFO     | [job] job monitor thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:27,921 | INFO     | [job] retrieve thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:27,970 | INFO     | [data] control thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:27,974 | INFO     | [payload] validate_post thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:27,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 01:07:38] 2024-05-19 23:07:28,131 | INFO     | [payload] control thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:28,194 | INFO     | [job] validate thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:28,270 | INFO     | all job control threads have been joined
[2024-05-20 01:07:38] 2024-05-19 23:07:28,271 | INFO     | [payload] failed_post thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:28,323 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:28,333 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 01:07:38] 2024-05-19 23:07:28,336 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:28,618 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:28,730 | INFO     | [data] copytool_in thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:28,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 01:07:38] 2024-05-19 23:07:29,169 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:29,275 | INFO     | [job] control thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:29,746 | INFO     | [job] queue monitor thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:30,338 | INFO     | [data] copytool_out thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:32,003 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 01:07:38] 2024-05-19 23:07:32,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47963902563392)>', '<ExcThread(monitor, started 47964075915008)>']
[2024-05-20 01:07:38] 2024-05-19 23:07:32,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 01:07:38] 2024-05-19 23:07:32,434 | INFO     | [monitor] control thread has ended
[2024-05-20 01:07:38] 2024-05-19 23:07:37,330 | INFO     | all workflow threads have been joined
[2024-05-20 01:07:38] 2024-05-19 23:07:37,330 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 01:07:38] 2024-05-19 23:07:37,331 | INFO     | traces error code: 0
[2024-05-20 01:07:38] 2024-05-19 23:07:37,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 01:07:38] 2024-05-19 23:07:37,439 [wrapper] ==== pilot stdout END ====
[2024-05-20 01:07:38] 2024-05-19 23:07:37,442 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 01:07:38] 2024-05-19 23:07:37,447 [wrapper] pilotpid: 384301
[2024-05-20 01:07:38] 2024-05-19 23:07:37,449 [wrapper] Pilot exit status: 0
[2024-05-20 01:07:38] 2024-05-19 23:07:37,455 [wrapper] pandaids: 6205818065
[2024-05-20 01:07:38] 2024-05-19 23:07:37,520 [wrapper] cleanup: SIGTERM to supervisor_pilot  804838 384302
[2024-05-20 01:07:38] 2024-05-19 23:07:37,523 [wrapper] Test setup, not cleaning
[2024-05-20 01:07:38] 2024-05-19 23:07:37,525 [wrapper] ==== wrapper stdout END ====
[2024-05-20 01:07:38] 2024-05-19 23:07:37,526 [wrapper] ==== wrapper stderr END ====
[2024-05-20 01:07:38] 2024-05-19 23:07:37,530 [wrapper] apfmon messages muted
[2024-05-20 01:07:38]  *** Error codes and diagnostics ***
[2024-05-20 01:07:38]     "exeErrorCode": 0,
[2024-05-20 01:07:38]     "exeErrorDiag": "",
[2024-05-20 01:07:38]     "pilotErrorCode": 0,
[2024-05-20 01:07:38]     "pilotErrorDiag": "",
[2024-05-20 01:07:38]  *** Listing of results directory ***
[2024-05-20 01:07:38] total 881076
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc    467845 May 13 08:49 pilot3.tar.gz
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc      5633 May 13 09:07 queuedata.json
[2024-05-20 01:07:38] -rwx------ 1 boinc boinc     32251 May 13 09:09 runpilot2-wrapper.sh
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc       100 May 19 21:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 01:07:38] -rwxr-xr-x 1 boinc boinc      7986 May 19 21:48 run_atlas
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc       105 May 19 21:48 job.xml
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc      6663 May 19 21:48 init_data.xml
[2024-05-20 01:07:38] -rw-r--r-- 2 boinc boinc 615461860 May 19 21:48 EVNT.38776140._000019.pool.root.1
[2024-05-20 01:07:38] -rw-r--r-- 2 boinc boinc     17537 May 19 21:48 start_atlas.sh
[2024-05-20 01:07:38] drwxrwx--x 2 boinc boinc      4096 May 19 21:48 shared
[2024-05-20 01:07:38] -rw-r--r-- 2 boinc boinc    479992 May 19 21:48 input.tar.gz
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc         0 May 19 21:48 boinc_lockfile
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc      2612 May 19 21:48 pandaJob.out
[2024-05-20 01:07:38] -rw------- 1 boinc boinc       424 May 19 21:48 setup.sh.local
[2024-05-20 01:07:38] -rw------- 1 boinc boinc   1014069 May 19 21:48 agis_schedconf.cvmfs.json
[2024-05-20 01:07:38] -rw------- 1 boinc boinc   1324701 May 19 21:48 cric_ddmendpoints.json
[2024-05-20 01:07:38] drwx------ 4 boinc boinc      4096 May 19 21:48 pilot3
[2024-05-20 01:07:38] -rw------- 1 boinc boinc 280006658 May 20 01:06 HITS.38776146._000463.pool.root.1
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc       531 May 20 01:07 boinc_task_state.xml
[2024-05-20 01:07:38] -rw------- 1 boinc boinc      1047 May 20 01:07 memory_monitor_summary.json
[2024-05-20 01:07:38] -rw------- 1 boinc boinc         0 May 20 01:07 agis_ddmendpoints.agis.ALL.json
[2024-05-20 01:07:38] -rw------- 1 boinc boinc    315857 May 20 01:07 log.38776146._000463.job.log.tgz.1
[2024-05-20 01:07:38] -rw------- 1 boinc boinc      7756 May 20 01:07 heartbeat.json
[2024-05-20 01:07:38] -rw------- 1 boinc boinc        95 May 20 01:07 pilot_heartbeat.json
[2024-05-20 01:07:38] -rw------- 1 boinc boinc      4221 May 20 01:07 pilotlog.txt
[2024-05-20 01:07:38] -rw------- 1 boinc boinc   1293247 May 20 01:07 log.38776146._000463.job.log.1
[2024-05-20 01:07:38] -rw------- 1 boinc boinc       357 May 20 01:07 output.list
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc       620 May 20 01:07 runtime_log
[2024-05-20 01:07:38] -rw------- 1 boinc boinc   1628160 May 20 01:07 result.tar.gz
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc     11410 May 20 01:07 runtime_log.err
[2024-05-20 01:07:38] -rw------- 1 boinc boinc       657 May 20 01:07 lGSLDmrzeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmAgJKDmBm2Kom.diag
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc      8192 May 20 01:07 boinc_mmap_file
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc        28 May 20 01:07 wrapper_checkpoint.txt
[2024-05-20 01:07:38] -rw-r--r-- 1 boinc boinc     21334 May 20 01:07 stderr.txt
[2024-05-20 01:07:38] HITS file was successfully produced:
[2024-05-20 01:07:38] -rw------- 1 boinc boinc 280006658 May 20 01:06 shared/HITS.pool.root.1
[2024-05-20 01:07:38]  *** Contents of shared directory: ***
[2024-05-20 01:07:38] total 876580
[2024-05-20 01:07:38] -rw-r--r-- 2 boinc boinc 615461860 May 19 21:48 ATLAS.root_0
[2024-05-20 01:07:38] -rw-r--r-- 2 boinc boinc     17537 May 19 21:48 start_atlas.sh
[2024-05-20 01:07:38] -rw-r--r-- 2 boinc boinc    479992 May 19 21:48 input.tar.gz
[2024-05-20 01:07:38] -rw------- 1 boinc boinc 280006658 May 20 01:06 HITS.pool.root.1
[2024-05-20 01:07:38] -rw------- 1 boinc boinc   1628160 May 20 01:07 result.tar.gz
01:07:40 (379591): run_atlas exited; CPU time 44464.426018
01:07:40 (379591): called boinc_finish(0)

</stderr_txt>
]]>

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